BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041804
(403 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224081867|ref|XP_002306508.1| predicted protein [Populus trichocarpa]
gi|222855957|gb|EEE93504.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/390 (77%), Positives = 342/390 (87%), Gaps = 5/390 (1%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+TLSCY NDWKRAL+FFNWVET+ F HTT+TYN +IDILGKFFEFDLSW+LI RM++NP
Sbjct: 51 QTLSCYNNDWKRALDFFNWVETESQFQHTTETYNRMIDILGKFFEFDLSWDLIQRMRNNP 110
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTF-NKLDEFGLKDEVSYCNLVDALCEYKHVIEA 120
S PNH TFR++F RY++AHLVNEA+ + ++L EFGLKDE SYC LVDALCEYKHVIEA
Sbjct: 111 FSTPNHTTFRVLFHRYISAHLVNEAVSVYEDRLKEFGLKDETSYCILVDALCEYKHVIEA 170
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
ELCFG N N + TKIYNMILRGWFKM WWGKCREFWEEMD++ V KDLHSY
Sbjct: 171 HELCFGNNNNSINVRNI----TKIYNMILRGWFKMGWWGKCREFWEEMDRKEVCKDLHSY 226
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
SIYMDI+CKSGKPWKAVKLYKEMK KGIK+DVVAYNTVI A+G+SEGVDF +RVYREMRE
Sbjct: 227 SIYMDILCKSGKPWKAVKLYKEMKSKGIKLDVVAYNTVINAIGLSEGVDFVLRVYREMRE 286
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG 300
+GCQP+VVTCNTVIKLLCENGR++EAY +L EMP+ PDV TYHCFFRCLEKP+EIL
Sbjct: 287 LGCQPNVVTCNTVIKLLCENGRIKEAYKMLDEMPQSYIAPDVFTYHCFFRCLEKPKEILC 346
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
LFD+MIE+G+ P+MDTYVML+RKFGRWGFLRPVF+VWKKME+LGCSPDEFAYNAL+DALI
Sbjct: 347 LFDQMIENGVCPRMDTYVMLMRKFGRWGFLRPVFLVWKKMEKLGCSPDEFAYNALIDALI 406
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPREELGT 390
KGM+DMARKYDEEM AKGLSAKPR EL T
Sbjct: 407 QKGMVDMARKYDEEMMAKGLSAKPRVELNT 436
>gi|359487106|ref|XP_002274114.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Vitis vinifera]
Length = 571
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 284/391 (72%), Positives = 336/391 (85%), Gaps = 5/391 (1%)
Query: 1 RETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDN 60
R+TLSCYANDWKRALEFF+WV+T C F HTTDTYN +IDILGKFFEFDL W LI RMK +
Sbjct: 182 RQTLSCYANDWKRALEFFDWVQTQCGFNHTTDTYNGMIDILGKFFEFDLIWVLIQRMKAD 241
Query: 61 PSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEA 120
P + PNH TFR +FKRY AHLV EAM + + +EF L+DE SY NL+DALCEYKHVIEA
Sbjct: 242 PVAYPNHVTFRFVFKRYAAAHLVEEAMNAYYRTEEFNLRDETSYSNLIDALCEYKHVIEA 301
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+EL E+K++ F+ + KIYN+ILRGWFKM WW KCREFWEEMD+RGV K L+SY
Sbjct: 302 EELFLKESKDLVFN-----DDVKIYNIILRGWFKMGWWKKCREFWEEMDRRGVCKSLYSY 356
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
SIYMDI CKSGKPW+AVKLYKEMKKKGI++DVVAYNTVIRA+G+SEGVDF++RV+REM+E
Sbjct: 357 SIYMDIQCKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEGVDFSIRVFREMKE 416
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG 300
+GC+P+VVT NT+IKLLCENGR+REAY V +M +KG P+VITYHCFF C+EKP++IL
Sbjct: 417 VGCEPNVVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPNVITYHCFFGCIEKPKQILR 476
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
FDRMI SG+RP+MDTYVML++KFGRWGFLRPVF+VWKKMEE GCSPD AYNAL+DAL+
Sbjct: 477 TFDRMINSGVRPRMDTYVMLMKKFGRWGFLRPVFIVWKKMEEQGCSPDACAYNALIDALV 536
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPREELGTK 391
KGM+D+ARKY+EEM AKGLSAKPR +LGTK
Sbjct: 537 QKGMVDLARKYEEEMLAKGLSAKPRVDLGTK 567
>gi|449491189|ref|XP_004158824.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Cucumis sativus]
Length = 450
Score = 616 bits (1589), Expect = e-174, Method: Compositional matrix adjust.
Identities = 285/396 (71%), Positives = 339/396 (85%), Gaps = 5/396 (1%)
Query: 1 RETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDN 60
RE L Y NDWKR+ EFFNWVE++C F HTT+TYN ++DILGKFFEFDLSW LI+RM+ +
Sbjct: 51 REALDSYCNDWKRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLINRMRQS 110
Query: 61 PSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEA 120
PS+ P+HATFRI+FKRY AHLV+EA+ + +L EF L+DE S+CNL+DALCE +HV EA
Sbjct: 111 PSASPDHATFRILFKRYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVDEA 170
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
QELCFG+N+ + + TKI+N+ILRGW KM WW KCR+FWEEMDK+GV KDLHSY
Sbjct: 171 QELCFGKNRKLDCD-----SSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSY 225
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
SIYMDI CKSGKPWKAVKLYKEMKKKG+K+DVVAYNTVI AVG+SEGVDFA RV+ EM+E
Sbjct: 226 SIYMDIQCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKE 285
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG 300
MGC+P+VVTCNTVIKL CENGR ++A+ +L +M K+ C P+VITYHCFFR LEKP+EIL
Sbjct: 286 MGCKPNVVTCNTVIKLFCENGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILV 345
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
LFDRMI+ G+ PKMDTYVMLLRKFGRWGFLRPVF+VW KMEELGCSP+E AYNAL+DAL+
Sbjct: 346 LFDRMIKYGVHPKMDTYVMLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALV 405
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGG 396
+KGM+DMARKYDEEM AKGLS K R ELGT+++ GG
Sbjct: 406 EKGMIDMARKYDEEMVAKGLSPKLRVELGTQMMNGG 441
>gi|449436631|ref|XP_004136096.1| PREDICTED: uncharacterized protein LOC101205322 [Cucumis sativus]
Length = 1559
Score = 606 bits (1563), Expect = e-171, Method: Compositional matrix adjust.
Identities = 277/384 (72%), Positives = 331/384 (86%), Gaps = 5/384 (1%)
Query: 13 RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
R+ EFFNWVE++C F HTT+TYN ++DILGKFFEFDLSW LI+RM+ +PS+ P+HATFRI
Sbjct: 614 RSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLINRMRQSPSASPDHATFRI 673
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
+FKRY AHLV+EA+ + +L EF L+DE S+CNL+DALCE +HV EAQELCFG+N+ +
Sbjct: 674 LFKRYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVDEAQELCFGKNRKLD 733
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
+ TKI+N+ILRGW KM WW KCR+FWEEMDK+GV KDLHSYSIYMDI CKSGK
Sbjct: 734 CD-----SSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGK 788
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
PWKAVKLYKEMKKKG+K+DVVAYNTVI AVG+SEGVDFA RV+ EM+EMGC+P+VVTCNT
Sbjct: 789 PWKAVKLYKEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNT 848
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRP 312
VIKL CENGR ++A+ +L +M K+ C P+VITYHCFFR LEKP+EIL LFDRMI+ G+ P
Sbjct: 849 VIKLFCENGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHP 908
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
KMDTYVMLLRKFGRWGFLRPVF+VW KMEELGCSP+E AYNAL+DAL++KGM+DMARKYD
Sbjct: 909 KMDTYVMLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYD 968
Query: 373 EEMFAKGLSAKPREELGTKLVQGG 396
EEM AKGLS K R ELGT+++ GG
Sbjct: 969 EEMVAKGLSPKLRVELGTQMMNGG 992
>gi|356547448|ref|XP_003542124.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Glycine max]
Length = 445
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 267/397 (67%), Positives = 327/397 (82%), Gaps = 3/397 (0%)
Query: 1 RETLSCYANDWKRALEFFNWVE-TDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKD 59
R+TL + NDWKRALEFFNWVE + F H+TDT+N ++DILGKFFEF L W+LI RM
Sbjct: 38 RQTLLSFNNDWKRALEFFNWVEESHSQFHHSTDTFNLMLDILGKFFEFKLCWDLIRRMNA 97
Query: 60 NPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIE 119
+PSS PNHATFR+MFKRYV+AH VN+A+ TFN+L EF LKD S+ NL+DALCEYKHV+E
Sbjct: 98 HPSSPPNHATFRLMFKRYVSAHSVNDAIDTFNRLGEFNLKDHTSFSNLLDALCEYKHVLE 157
Query: 120 AQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
AQ+L FG + V S + + TKI+NM+LRGWFK+ WW KC EFWEEMDK+GV KDLHS
Sbjct: 158 AQDLLFGNDNRVTLS-VDPIGNTKIHNMVLRGWFKLGWWSKCNEFWEEMDKKGVHKDLHS 216
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
YSIYMDI+CK GKPWKAVKL+KE+KKKG K+DVV YN VIRA+G+S GVDF++RV+REM+
Sbjct: 217 YSIYMDILCKGGKPWKAVKLFKEIKKKGFKLDVVVYNIVIRAIGLSHGVDFSIRVFREMK 276
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE-MPKKGCVPDVITYHCFFRCLEKPREI 298
E+G +P+VVT NT+I+LLC+ R +EA A+L MP GC P ++YHCFF +EKP++I
Sbjct: 277 ELGIKPTVVTYNTLIRLLCDCYRHKEALALLRTIMPSDGCHPTAVSYHCFFASMEKPKQI 336
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
L +FD M+ESG+RP MDTYVMLL KFGRWGFLRPVF+VW KM++LGCSPD AYNAL+DA
Sbjct: 337 LAMFDEMVESGVRPTMDTYVMLLNKFGRWGFLRPVFMVWNKMKQLGCSPDAAAYNALIDA 396
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
L+DK ++DMARKYDEEM AKGLS KPR+ELGTKL+
Sbjct: 397 LVDKALIDMARKYDEEMLAKGLSPKPRKELGTKLLAA 433
>gi|357455405|ref|XP_003597983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487031|gb|AES68234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 262/399 (65%), Positives = 327/399 (81%), Gaps = 8/399 (2%)
Query: 1 RETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDN 60
R TL+ + ND+KRALEFFNWVET F H+T+TYN V+DILGKFFEF WNLIHRM+ N
Sbjct: 80 RATLTSFNNDYKRALEFFNWVETKFKFQHSTETYNLVLDILGKFFEFQQCWNLIHRMRQN 139
Query: 61 PSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEA 120
P S+PNH TFR+MFKRYV+AH V +A+ TF +L+EF LKDE S+ NL+DALCEYKHV+EA
Sbjct: 140 PHSLPNHTTFRVMFKRYVSAHCVQDAVNTFQRLNEFNLKDETSFSNLIDALCEYKHVLEA 199
Query: 121 QELCFGENKNV-------GFSGLVEMNK-TKIYNMILRGWFKMSWWGKCREFWEEMDKRG 172
Q+L FG+ KN G G V +K TKI+N++LRGW+K+ WW KC EFW+EMD+RG
Sbjct: 200 QDLVFGDKKNQTLTWIVDGVDGFVASSKNTKIFNIVLRGWYKLGWWSKCWEFWDEMDRRG 259
Query: 173 VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM 232
V KDLHSYSIYMDI+ K GKPWKAVKL+KEMK+KGI++DVV YN VIRA+GVS+GVDF++
Sbjct: 260 VEKDLHSYSIYMDILSKGGKPWKAVKLFKEMKRKGIQLDVVVYNIVIRAIGVSQGVDFSI 319
Query: 233 RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
R++ EM+++G P+VVT NT+I+LLC++ R +EA ++ M + GC P+ ++Y CFF CL
Sbjct: 320 RMFCEMKDLGLNPTVVTYNTIIRLLCDSYRYKEALTLIRTMRRDGCSPNAVSYQCFFACL 379
Query: 293 EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
EKP+ I+ LFD MIESG+RP MDTYVMLL+KF RWGFLR VF+VW +MEELGCSPD AY
Sbjct: 380 EKPKFIIELFDGMIESGVRPTMDTYVMLLKKFARWGFLRLVFLVWNRMEELGCSPDASAY 439
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTK 391
NAL+DAL++KG++DMARKYDEEM AKGLS KPR+ELGTK
Sbjct: 440 NALIDALVEKGLIDMARKYDEEMLAKGLSPKPRKELGTK 478
>gi|15220166|ref|NP_178170.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75264854|sp|Q9M8M3.1|PP136_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80550, mitochondrial; Flags: Precursor
gi|6730729|gb|AAF27119.1|AC018849_7 unknown protein; 31926-33272 [Arabidopsis thaliana]
gi|332198297|gb|AEE36418.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 448
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 265/397 (66%), Positives = 325/397 (81%), Gaps = 5/397 (1%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E L+CY+NDW++ALEFFNWVE + F HTT+T+N VIDILGK+FEF++SW LI+RM N
Sbjct: 52 EALTCYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNT 111
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQ 121
S+PNH TFRI+FKRYVTAHLV EA+ ++KLD+F L+DE S+ NLVDALCE+KHV+EA+
Sbjct: 112 ESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEAE 171
Query: 122 ELCFGENK-NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
ELCFG+N GFS ++ TKI+N+ILRGW K+ WWGKC+E+W++MD GV KDL SY
Sbjct: 172 ELCFGKNVIGNGFS----VSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSY 227
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
SIYMDIMCKSGKPWKAVKLYKEMK + +K+DVVAYNTVIRA+G S+GV+F +RV+REMRE
Sbjct: 228 SIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRE 287
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG 300
GC+P+V T NT+IKLLCE+GR+R+AY +L EMPK+GC PD ITY C F LEKP EIL
Sbjct: 288 RGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILS 347
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
LF RMI SG+RPKMDTYVML+RKF RWGFL+PV VWK M+E G +PD AYNA++DALI
Sbjct: 348 LFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALI 407
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGL 397
KGMLDMAR+Y+EEM +GLS + R EL K + L
Sbjct: 408 QKGMLDMAREYEEEMIERGLSPRRRPELVEKSLDETL 444
>gi|297839881|ref|XP_002887822.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333663|gb|EFH64081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 407
Score = 562 bits (1449), Expect = e-158, Method: Compositional matrix adjust.
Identities = 265/397 (66%), Positives = 323/397 (81%), Gaps = 5/397 (1%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E LSCY NDW++ALEFFNWVE + F HTT+T+N +IDILGK+FEF+ W LI+RM NP
Sbjct: 12 EALSCYINDWQKALEFFNWVEKESGFRHTTETFNRMIDILGKYFEFETCWALINRMIGNP 71
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQ 121
S+PNH TFRI+FKRYVTAHLV EA+ ++KLD+F L+D+ S+ NLVDALCE+KHV+EA+
Sbjct: 72 ESLPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDDTSFYNLVDALCEHKHVVEAE 131
Query: 122 ELCFGENKNV-GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
ELCFG+N GFS ++ TKI+N+ILRGW K+ WWGKC+E+W++MD GV KDL SY
Sbjct: 132 ELCFGKNVIAHGFS----VSNTKIHNLILRGWSKLGWWGKCKEYWDKMDTEGVPKDLFSY 187
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
SIYMDIMCKSGKPWKAVKLYKEMK + IK+DVVAYNTVIRA+G S+GV+F +RV+REMRE
Sbjct: 188 SIYMDIMCKSGKPWKAVKLYKEMKSRRIKLDVVAYNTVIRAIGASQGVEFGIRVFREMRE 247
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG 300
GC+P+V T NT+IKLLCE+GR+R+AY +L EMPKKGC PD I+Y C F LEKP EIL
Sbjct: 248 RGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKKGCQPDSISYMCLFSRLEKPSEILS 307
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
LF RMI SG+RPKMDTYVML+RKF RWGFL+PV VWK M+E G +PD AYNA++DALI
Sbjct: 308 LFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALI 367
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGL 397
KGMLDMAR+Y+EEM +GLS + R EL K + L
Sbjct: 368 QKGMLDMAREYEEEMIERGLSPRRRPELVEKSLDETL 404
>gi|147827256|emb|CAN64312.1| hypothetical protein VITISV_027954 [Vitis vinifera]
Length = 655
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 260/391 (66%), Positives = 312/391 (79%), Gaps = 32/391 (8%)
Query: 1 RETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDN 60
R+TLSCYANDWKRALEFF+WV+T C F HTTDTYN +IDILGKFFEFDL W LI RMK +
Sbjct: 293 RQTLSCYANDWKRALEFFDWVQTQCGFNHTTDTYNGMIDILGKFFEFDLIWVLIQRMKAD 352
Query: 61 PSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEA 120
P + PNH TFR +FKRY AHLV EAM + + +EF L+DE SY NL+DALCEYKHVIEA
Sbjct: 353 PVAYPNHVTFRFVFKRYAAAHLVEEAMNAYYRTEEFNLRDETSYSNLIDALCEYKHVIEA 412
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+EL E+K++ F+ + KIYN+ILRGWFK GVV++
Sbjct: 413 EELFLKESKDLVFN-----DDVKIYNIILRGWFK----------------NGVVEE---- 447
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
CKSGKPW+AVKLYKEMKKKGI++DVVAYNTVIRA+G+SEGVDF++RV+RE +E
Sbjct: 448 -------CKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEGVDFSIRVFREXKE 500
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG 300
+GC+P+VVT NT+IKLLCENGR+REAY V +M +KG P+VITYHCFF C+EKP++IL
Sbjct: 501 VGCEPNVVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPNVITYHCFFGCIEKPKQILR 560
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
FDRMI SG+RP+MDTYVML++KFGRWGFLRPVF+VWKKMEE GCSPD AYNAL+DAL+
Sbjct: 561 TFDRMINSGVRPRMDTYVMLMKKFGRWGFLRPVFIVWKKMEEQGCSPDACAYNALIDALV 620
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPREELGTK 391
KGM+D+ARKY+EEM AKGLSAKPR +LGTK
Sbjct: 621 QKGMVDLARKYEEEMLAKGLSAKPRVDLGTK 651
>gi|255579214|ref|XP_002530453.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529998|gb|EEF31923.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 391
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 259/398 (65%), Positives = 301/398 (75%), Gaps = 65/398 (16%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
ETLSCY+NDWK AL+FFNWVE +C+F
Sbjct: 54 ETLSCYSNDWKSALDFFNWVEKECNF---------------------------------- 79
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNK----LDEFGLKDEVSYCNLVDALCEYKHV 117
NH T TFN+ L++F LKDE S+CNL+DALCE+KHV
Sbjct: 80 ----NHTT------------------DTFNRMIDILEKFNLKDETSFCNLIDALCEHKHV 117
Query: 118 IEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
IE+QELCFG N +G+ +NKTKIYNMILRGWFKM WW KCREFWEEMD++GV KDL
Sbjct: 118 IESQELCFGNN-----NGIDIVNKTKIYNMILRGWFKMGWWSKCREFWEEMDQKGVHKDL 172
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
HSYSIYMDI+CK GKPWKAVKLYKEMK+KG+K+DVV+YN V+RAVG+SEGVDFAMRVYRE
Sbjct: 173 HSYSIYMDIVCKGGKPWKAVKLYKEMKRKGMKLDVVSYNIVVRAVGLSEGVDFAMRVYRE 232
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
M+E+GC P+VVT NT+IKLLCE GRV+EAY +L +M KKG V DVITYHCFFRCLEKP+E
Sbjct: 233 MKELGCMPNVVTYNTIIKLLCETGRVKEAYKMLDDMRKKGIVADVITYHCFFRCLEKPKE 292
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
IL LFDRMIESG++P+MDTYVML+RKFGRWGFLRPV +VWKKMEE GCSPDEFAYNAL+D
Sbjct: 293 ILWLFDRMIESGVQPRMDTYVMLMRKFGRWGFLRPVLLVWKKMEEQGCSPDEFAYNALID 352
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
AL+ KGML MAR+Y+EEM AKGLSAKPR EL K+ +G
Sbjct: 353 ALVQKGMLHMARRYEEEMLAKGLSAKPRAELSKKVDEG 390
>gi|359487102|ref|XP_002274044.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Vitis vinifera]
Length = 390
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 246/391 (62%), Positives = 285/391 (72%), Gaps = 62/391 (15%)
Query: 1 RETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDN 60
R+TLSCYANDWKRALEFF+WV+T C F HTTDTYN +IDILGKFFEFDL W LI RMK
Sbjct: 58 RQTLSCYANDWKRALEFFDWVQTQCGFNHTTDTYNGMIDILGKFFEFDLIWVLIQRMK-- 115
Query: 61 PSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEA 120
D V+Y N V +K A
Sbjct: 116 --------------------------------------ADPVAYPNHVTFRFVFKRYAAA 137
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
LVE ILRGWFKM WW KCREFWEEMD+RGV K L+SY
Sbjct: 138 H--------------LVEE--------ILRGWFKMGWWKKCREFWEEMDRRGVCKSLYSY 175
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
SIYMDI CKSGKPW+AVKLYKEMKKKGI++DVVAYNTVIRA+G+SEGVDF++RV+REM+E
Sbjct: 176 SIYMDIQCKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEGVDFSIRVFREMKE 235
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG 300
+GC+P+VVT NT+IKLLCENGR+REAY V +M +KG P+VITYHCFF C+EKP++IL
Sbjct: 236 VGCEPNVVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPNVITYHCFFGCIEKPKQILR 295
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
FDRMI SG+RP+MDTYVML++KFGRWGFLRPVF+VWKKMEE GCSPD AYNAL+DAL+
Sbjct: 296 TFDRMINSGVRPRMDTYVMLMKKFGRWGFLRPVFIVWKKMEEQGCSPDACAYNALIDALV 355
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPREELGTK 391
KGM+D+ARKY+EEM AKGLSAKPR +LGTK
Sbjct: 356 QKGMVDLARKYEEEMLAKGLSAKPRVDLGTK 386
>gi|359474664|ref|XP_003631508.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g80550, mitochondrial-like [Vitis vinifera]
Length = 384
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 232/349 (66%), Positives = 277/349 (79%), Gaps = 10/349 (2%)
Query: 1 RETLSCYANDWKRALEFFNWVETDCHFTHTTDT-YNSVIDILGKFFEFDLSWNLIHRMKD 59
R+TLSCYANDWKRALEFFNWV+T F H TDT YN +IDIL KFFEF L W LI RMK
Sbjct: 32 RQTLSCYANDWKRALEFFNWVQTQSGFNHPTDTSYNRMIDILSKFFEFYLVWVLIQRMKA 91
Query: 60 NPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIE 119
PS +PNHATF I+FK Y +AHLV EAM +++ +EF KDE Y NL+DALCEYKHVIE
Sbjct: 92 RPSCVPNHATFCIVFKHYASAHLVEEAMNAYDRTEEFNFKDETRYSNLIDALCEYKHVIE 151
Query: 120 AQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
A+EL E+K++ F+ + KIY+MILRGWFKM W KCREFWEEMD R K L S
Sbjct: 152 AEELFIRESKDLVFN-----DDVKIYDMILRGWFKMGXWKKCREFWEEMDWRSGCKSLCS 206
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
YSIYMDI CK G+PW+AVKLYKEMK GI++DVVAYN VIRA+G+SEGVDF++RVYREM+
Sbjct: 207 YSIYMDIQCKGGRPWRAVKLYKEMKTXGIRLDVVAYNAVIRAIGLSEGVDFSIRVYREMK 266
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL 299
E+GC+P+VVT +T+IKLLCE+GR+REAY VL +M +K C P+V+TYHCFF CLEKP++I
Sbjct: 267 ELGCEPNVVTYDTIIKLLCEHGRIREAYGVLDQMREKDCAPNVMTYHCFFGCLEKPKQIF 326
Query: 300 GLFDRMIES-GIRPKMDTYVMLLRKFGRWG--FLRPVFVVWKKMEELGC 345
+FDRMI S G +MDTYVML++KFGRWG LRPVF+V KMEE GC
Sbjct: 327 RMFDRMINSVGGLGRMDTYVMLMKKFGRWGILLLRPVFIV-XKMEEQGC 374
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 87/213 (40%), Gaps = 49/213 (23%)
Query: 175 KDLHSYSIYMDIMCKSGKPWKAVKLY-KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMR 233
KD YS +D +C+ +A +L+ +E K DV Y+ ++R F M
Sbjct: 131 KDETRYSNLIDALCEYKHVIEAEELFIRESKDLVFNDDVKIYDMILRGW-------FKMG 183
Query: 234 VYREMREM--------GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
+++ RE GC+ S+ + + + + C+ GR A + EM G DV+ Y
Sbjct: 184 XWKKCREFWEEMDWRSGCK-SLCSYSIYMDIQCKGGRPWRAVKLYKEMKTXGIRLDVVAY 242
Query: 286 HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
+ R +GL ++ IR V+++M+ELGC
Sbjct: 243 NAVIRA-------IGL-SEGVDFSIR------------------------VYREMKELGC 270
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
P+ Y+ ++ L + G + A ++M K
Sbjct: 271 EPNVVTYDTIIKLLCEHGRIREAYGVLDQMREK 303
>gi|242074540|ref|XP_002447206.1| hypothetical protein SORBIDRAFT_06g030430 [Sorghum bicolor]
gi|241938389|gb|EES11534.1| hypothetical protein SORBIDRAFT_06g030430 [Sorghum bicolor]
Length = 446
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 216/406 (53%), Positives = 292/406 (71%), Gaps = 13/406 (3%)
Query: 2 ETLSCYANDWKRALEFFNWV--ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLI--HRM 57
ETLS YANDW+RAL+FF+W T + T T +DILGK FEF L+ +L+ H
Sbjct: 44 ETLSLYANDWRRALDFFHWSASPTGANLPPTAATLARAVDILGKHFEFPLATSLLLSHHD 103
Query: 58 KDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLD-EFGLKDEVSYCNLVDALCEYKH 116
++P+ + R + R A+LV++A+ F+ GL+DE S+ LVDALC+++
Sbjct: 104 PEDPAFL--RPALRALLNRLAAANLVDDALRAFDSTAASIGLRDEASFHLLVDALCDHRR 161
Query: 117 VIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
V EA LCFG++ G TK +N++LRGW K W + R+ W +MD+RGV KD
Sbjct: 162 VDEADHLCFGKDPPPFPPG------TKTHNLLLRGWAKTRAWARLRQLWFDMDRRGVAKD 215
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
LHSYSIYMD + KSGKPWK K++KEMK+KG+++D VAYNT I AVG+++GVD A+R+YR
Sbjct: 216 LHSYSIYMDALAKSGKPWKTFKVFKEMKQKGVRIDTVAYNTAIHAVGLAQGVDSAVRLYR 275
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR 296
+M + GC+P+ T N ++KL C+ GR +E YA + +M K GC PDV+TYHCFF+ L +P+
Sbjct: 276 QMVDAGCKPNTATYNGIVKLFCKEGRFKEGYAFVQQMHKTGCKPDVLTYHCFFQFLSRPQ 335
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
E+LGLF++M+E G +P+MDTYVML+++FGRWGFLRPVF+VWK MEE G SPD FAYNAL+
Sbjct: 336 EVLGLFEKMLERGCQPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLSPDAFAYNALI 395
Query: 357 DALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQS 402
DAL+ KGM+D+ARKYDEEM AKGLS KPR+ELGTKL + D + +
Sbjct: 396 DALLQKGMVDLARKYDEEMLAKGLSPKPRKELGTKLPEAESDSDNA 441
>gi|226492862|ref|NP_001141929.1| uncharacterized protein LOC100274078 [Zea mays]
gi|194706478|gb|ACF87323.1| unknown [Zea mays]
gi|414585156|tpg|DAA35727.1| TPA: hypothetical protein ZEAMMB73_571639 [Zea mays]
Length = 442
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 214/404 (52%), Positives = 289/404 (71%), Gaps = 9/404 (2%)
Query: 2 ETLSCYANDWKRALEFFNWVETDC--HFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKD 59
+TLS YANDW+RAL+FF+W + + T T +DILGK FEF L+ +L+ D
Sbjct: 40 KTLSLYANDWRRALDFFHWSASPAGANLPPTAATLARAVDILGKHFEFPLATSLLLSHHD 99
Query: 60 NPSSIPNHATFRIMFKRYVTAHLVNEAMGTF-NKLDEFGLKDEVSYCNLVDALCEYKHVI 118
R + R A+L+++A+ F + GL DEVS+ LVDALC+++ V
Sbjct: 100 PGDPTFLRPALRALLNRLAAANLIDDALHAFESTAASIGLCDEVSFHILVDALCDHRRVD 159
Query: 119 EAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
EA LCFG++ G TK +N++LRGW K W + R+ W +MD+RGV KDLH
Sbjct: 160 EADHLCFGKDPPPFPPG------TKTHNLLLRGWAKAHAWARLRQLWFDMDRRGVAKDLH 213
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
SYSIYMD + KSGKPWKA K++KEMK++GI++D VAYNT I AVG+++GVD A+R+YR+M
Sbjct: 214 SYSIYMDALAKSGKPWKAFKVFKEMKQRGIRIDTVAYNTAIHAVGMAQGVDSAVRLYRQM 273
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI 298
+ GC+P++ T N +IKL C+ GR +E YA + +M K GC PDV+TYHCFF+ L +P+E+
Sbjct: 274 VDAGCKPNIATYNAIIKLFCKEGRFKEGYAFVQQMRKTGCKPDVLTYHCFFQYLSRPQEV 333
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
LGLF++M+E G +P+MDTYVML+++FGRWGFLRPVF+VWK MEE G SPD FAYNAL+DA
Sbjct: 334 LGLFEKMLERGCQPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLSPDAFAYNALIDA 393
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQS 402
L+ KGM+D+ARKYDE+M AKGLS KPR+ELGTKL + D + +
Sbjct: 394 LLQKGMVDLARKYDEKMLAKGLSPKPRKELGTKLPEAESDSDNT 437
>gi|115460906|ref|NP_001054053.1| Os04g0643700 [Oryza sativa Japonica Group]
gi|38344884|emb|CAD41907.2| OSJNBa0033G05.8 [Oryza sativa Japonica Group]
gi|113565624|dbj|BAF15967.1| Os04g0643700 [Oryza sativa Japonica Group]
gi|125591829|gb|EAZ32179.1| hypothetical protein OsJ_16385 [Oryza sativa Japonica Group]
gi|215701473|dbj|BAG92897.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704877|dbj|BAG94905.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 442
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 214/406 (52%), Positives = 292/406 (71%), Gaps = 11/406 (2%)
Query: 2 ETLSCYANDWKRALEFFNWVETD--CHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKD 59
ETLS YANDW+RALEFF+W + + T T +D+LGK FEF L+ +L+ D
Sbjct: 38 ETLSLYANDWRRALEFFHWSASPDGANVPPTPATVARAVDVLGKHFEFPLATSLLVSHHD 97
Query: 60 NPSSIPN--HATFRIMFKRYVTAHLVNEAMGTFNKL-DEFGLKDEVSYCNLVDALCEYKH 116
+ P+ R + R A+L+++A+ F+ GL+DE S+ LVDALC+++
Sbjct: 98 PGRADPSFLRPALRSLLNRLAAANLIDDAIRAFDSTAGSIGLRDEASFHALVDALCDHRR 157
Query: 117 VIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
V EA LCFG++ F + TK YN++LRGW K W + R+ W +MD RGV KD
Sbjct: 158 VDEAHHLCFGKDPP-PFPPV-----TKTYNLLLRGWAKTRAWARLRQLWFDMDSRGVAKD 211
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
LHSYSIYMD + KSGKPWKA K++KEMK+KG+ +DVVAYNT I +VG+++GVDFA+R+YR
Sbjct: 212 LHSYSIYMDALAKSGKPWKAFKVFKEMKQKGMAIDVVAYNTAIHSVGLAQGVDFAIRLYR 271
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR 296
+M + GC+P+ T NT++KLLC+ GR +E YA + +M K G P+V+TYHCFF+ L +P+
Sbjct: 272 QMVDAGCKPNASTFNTIVKLLCKEGRFKEGYAFVQQMHKFGIEPNVLTYHCFFQYLSRPQ 331
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
E+LGLF++M+E G RP+MDTYVML+++FGRWGFLRPVF+VWK ME+ G SPD FAYN+L+
Sbjct: 332 EVLGLFEKMLERGCRPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEKQGLSPDAFAYNSLI 391
Query: 357 DALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQS 402
DAL+ KGM+D+ARKYDEEM +KGLS KPR+ELGTK+ D + +
Sbjct: 392 DALLQKGMVDLARKYDEEMLSKGLSPKPRKELGTKIPGAESDSDNA 437
>gi|90399282|emb|CAH68243.1| H0306F03.10 [Oryza sativa Indica Group]
gi|125549952|gb|EAY95774.1| hypothetical protein OsI_17648 [Oryza sativa Indica Group]
Length = 442
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 214/406 (52%), Positives = 291/406 (71%), Gaps = 11/406 (2%)
Query: 2 ETLSCYANDWKRALEFFNWVETD--CHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKD 59
ETLS YANDW+RALEFF+W + + T T +D+LGK FEF L+ +L+ D
Sbjct: 38 ETLSLYANDWRRALEFFHWSASPDGANVPPTPATVARAVDVLGKHFEFPLATSLLVSHHD 97
Query: 60 NPSSIPN--HATFRIMFKRYVTAHLVNEAMGTFNKL-DEFGLKDEVSYCNLVDALCEYKH 116
+ P+ R + R A+L+++A+ F+ GL+DE S+ LVDALC+++
Sbjct: 98 PGRADPSFLRPALRSLLNRLAAANLIDDAIRAFDSTAGSIGLRDEASFHALVDALCDHRR 157
Query: 117 VIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
V EA LCFG++ F + TK YN++LRGW K W + R+ W +MD RGV KD
Sbjct: 158 VDEAHHLCFGKDPP-PFPPV-----TKTYNLLLRGWAKTRAWARLRQLWFDMDSRGVAKD 211
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
LHSYSIYMD + KSGKPWKA K++KEMK+KG+ +DVVAYNT I +VG+++GVDFA+R+YR
Sbjct: 212 LHSYSIYMDALAKSGKPWKAFKVFKEMKQKGMAIDVVAYNTAIHSVGLAQGVDFAIRLYR 271
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR 296
+M + GC+P+ T NT++KLLC+ GR +E YA + +M K G P+V+TYHCFF+ L +P+
Sbjct: 272 QMVDAGCKPNASTFNTIVKLLCKEGRFKEGYAFVQQMHKFGIEPNVLTYHCFFQYLSRPQ 331
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
E+LGLF++M+E G P+MDTYVML+++FGRWGFLRPVF+VWK MEE G SPD FAYN+L+
Sbjct: 332 EVLGLFEKMLERGCWPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLSPDAFAYNSLI 391
Query: 357 DALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQS 402
DAL+ KGM+D+ARKYDEEM +KGLS KPR+ELGTK+ D + +
Sbjct: 392 DALLQKGMVDLARKYDEEMLSKGLSPKPRKELGTKIPGAESDSDNA 437
>gi|357166306|ref|XP_003580667.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Brachypodium distachyon]
Length = 441
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/404 (52%), Positives = 286/404 (70%), Gaps = 9/404 (2%)
Query: 2 ETLSCYANDWKRALEFFNWVETDC--HFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKD 59
ETLS Y NDW+RAL+FF+W + + T T + IDILGK FEF L+ +L+ D
Sbjct: 39 ETLSLYTNDWRRALDFFHWSASPAGANLPPTAATLSRAIDILGKHFEFPLATSLLLSHHD 98
Query: 60 NPSSIPNHATFRIMFKRYVTAHLVNEAMGTF-NKLDEFGLKDEVSYCNLVDALCEYKHVI 118
R + R A+LV++A+ F + GL+DE S+ L+DALC+++ V
Sbjct: 99 PSDPAFLRPALRALLNRLAAANLVDDAVRVFESTAGSIGLRDEASFHLLIDALCDHRRVD 158
Query: 119 EAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
EA LCFG+ G TK +N++LRGW K W + R+ W +MD RGV KDLH
Sbjct: 159 EAHHLCFGKAPPPFPPG------TKTHNLLLRGWAKTRAWTRLRQHWFDMDNRGVAKDLH 212
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
SYSIYMD + KSGKPWKAVK++KEMK+K + +D+VAYNT I A+G+++GVDF++R+YR+M
Sbjct: 213 SYSIYMDALAKSGKPWKAVKVFKEMKQKRLPVDIVAYNTAIHAIGLAQGVDFSVRLYRQM 272
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI 298
+ GC+P+ T NT++KLLC+ GR RE YA + +M K GC P+V+TYHCFF+ L +P+E+
Sbjct: 273 VDAGCKPNTATFNTIVKLLCKEGRFREGYAFVQQMHKAGCEPNVLTYHCFFQYLSRPQEV 332
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
L LF++M+E G RP+MDTYVML+++FGRWGFLRPVF VWK MEE G SPD FAYN L+DA
Sbjct: 333 LVLFEKMLERGCRPRMDTYVMLIKRFGRWGFLRPVFFVWKTMEEQGLSPDAFAYNTLIDA 392
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQS 402
L++KGM+D+ARKYDEEM AKGLS KPR+ELGT+L D + +
Sbjct: 393 LLEKGMVDLARKYDEEMLAKGLSPKPRKELGTQLPGAESDSDNA 436
>gi|18491213|gb|AAL69509.1| unknown protein [Arabidopsis thaliana]
Length = 320
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 212/314 (67%), Positives = 258/314 (82%), Gaps = 5/314 (1%)
Query: 79 TAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENK-NVGFSGLV 137
TAHLV EA+ ++KLD+F L+DE S+ NLVDALCE+KHV+EA+ELCFG+N GFS
Sbjct: 1 TAHLVQEAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFS--- 57
Query: 138 EMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAV 197
++ TKI+N+ILRGW K+ WWGKC+E+W++MD GV KDL SYSIYMDIMCKSGKPWKAV
Sbjct: 58 -VSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAV 116
Query: 198 KLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLL 257
KLYKEMK + +K+DVVAYNTVIRA+G S+GV+F +RV+REMRE GC+P+V T NT+IKLL
Sbjct: 117 KLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLL 176
Query: 258 CENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTY 317
CE+GR+R+AY +L EMPK+GC PD ITY C F LEKP EIL LF RMI SG+RPKMDTY
Sbjct: 177 CEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSLFGRMIRSGVRPKMDTY 236
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
VML+RKF RWGFL+PV VWK M+E G +PD AYNA++DALI KGMLDMAR+Y+EEM
Sbjct: 237 VMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIE 296
Query: 378 KGLSAKPREELGTK 391
+GLS + R EL K
Sbjct: 297 RGLSPRRRPELVEK 310
>gi|326525315|dbj|BAK07927.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 439
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/405 (51%), Positives = 282/405 (69%), Gaps = 6/405 (1%)
Query: 1 RETLSCYANDWKRALEFFNWVETDC--HFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMK 58
+ETLS Y NDW+RAL+FF+W + + T T + +DILGK FEF + +L+
Sbjct: 33 QETLSLYTNDWRRALDFFHWSASPGGGNLRPTPSTLSRAVDILGKHFEFPQATSLLLAHH 92
Query: 59 DNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF-NKLDEFGLKDEVSYCNLVDALCEYKHV 117
D R + R A+LV++A+ F + GL+DE S+ L+DALC+++ V
Sbjct: 93 DPTDPAFLRPALRALLNRLAAANLVDDAVRAFESTAASVGLRDEASFHLLIDALCDHRRV 152
Query: 118 IEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
EA LC G + TK +N++LRGW K W + R+ W +MD RGV KDL
Sbjct: 153 DEAHHLCLGGRAA---APPPFPPGTKTHNLLLRGWAKARAWARLRQHWLDMDARGVAKDL 209
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
HSYSIYMD + KSGKPWKAVKL+KEMK+K + +D+VAYN I AVG++EGVDFA+R+YR+
Sbjct: 210 HSYSIYMDALAKSGKPWKAVKLFKEMKQKRLPVDIVAYNIAIHAVGLAEGVDFAVRMYRQ 269
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
M E GC+P+ T NT++KLLC+ GR +E YA + +M K GC P+ +TYHCFF+ L +P+E
Sbjct: 270 MIEAGCRPNTATFNTIVKLLCKEGRFKEGYAFVQQMHKAGCEPNELTYHCFFQYLSRPQE 329
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+L LF++M++ G RP+MDTYVML+++FGRWGFLRPVF VWK MEE G +PD FAYN L+D
Sbjct: 330 VLALFEKMLQRGCRPRMDTYVMLIKRFGRWGFLRPVFFVWKTMEEQGLTPDAFAYNTLID 389
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQS 402
AL++KGM+D+ARKYDEEM AKGLS KPR+ELGT+L D + +
Sbjct: 390 ALLEKGMVDLARKYDEEMLAKGLSPKPRKELGTQLPGAESDSDNA 434
>gi|125549949|gb|EAY95771.1| hypothetical protein OsI_17645 [Oryza sativa Indica Group]
Length = 240
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 148/235 (62%), Positives = 194/235 (82%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
MD RGV KDLHSYSIYMD + KSGKPWKA K++KEMK+KG+ +DVVAYNT I +VG+++G
Sbjct: 1 MDSRGVAKDLHSYSIYMDALAKSGKPWKAFKVFKEMKQKGMAIDVVAYNTAIHSVGLAQG 60
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
VDFA+R+YR+M + GC+P+ T NT++KLLC+ GR +E YA + +M K G P+V+TYHC
Sbjct: 61 VDFAIRLYRQMVDAGCKPNASTFNTIVKLLCKEGRFKEGYAFVQQMHKFGIEPNVLTYHC 120
Query: 288 FFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
FF+ L +P+E+LGLF++M+E G P+MDTYVML+++FGRWGFLRPVF+VWK MEE G SP
Sbjct: 121 FFQYLSRPQEVLGLFEKMLERGCWPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLSP 180
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQS 402
D FAYN+L+DAL+ KGM+D+ARKYDEEM +KGLS KPR+ELGTK+ D + +
Sbjct: 181 DAFAYNSLIDALLQKGMVDLARKYDEEMLSKGLSPKPRKELGTKIPGAESDSDNA 235
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 20/222 (9%)
Query: 99 KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWW 158
KD SY +DAL + +A ++ F E K G + V T I+++ L +
Sbjct: 8 KDLHSYSIYMDALAKSGKPWKAFKV-FKEMKQKGMAIDVVAYNTAIHSVGLAQGVDFAI- 65
Query: 159 GKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTV 218
+ +M G + +++ + ++CK G+ + ++M K GI+ +V+ Y+
Sbjct: 66 ----RLYRQMVDAGCKPNASTFNTIVKLLCKEGRFKEGYAFVQQMHKFGIEPNVLTYHCF 121
Query: 219 IRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGC 278
+ + + V + ++ +M E GC P + T +IK G +R + V M ++G
Sbjct: 122 FQYLSRPQEV---LGLFEKMLERGCWPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGL 178
Query: 279 VPDVITYHCFFRCLEKPREILGLFD-------RMIESGIRPK 313
PD Y+ L + G+ D M+ G+ PK
Sbjct: 179 SPDAFAYNSLIDALLQK----GMVDLARKYDEEMLSKGLSPK 216
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
YN+ I +G D + L +M D PN +TF + K E +
Sbjct: 47 AYNTAIHSVGLAQGVDFAIRLYRQMVDAGCK-PNASTFNTIVKLLCKEGRFKEGYAFVQQ 105
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG-FSGLVEMN---KTKIYNMI 148
+ +FG++ N++ C ++++ QE+ +G F ++E + Y M+
Sbjct: 106 MHKFGIEP-----NVLTYHCFFQYLSRPQEV-------LGLFEKMLERGCWPRMDTYVML 153
Query: 149 LRGWFKMSWWGKCREF---WEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
++ + WG R W+ M+++G+ D +Y+ +D + + G A K +EM
Sbjct: 154 IK---RFGRWGFLRPVFIVWKAMEEQGLSPDAFAYNSLIDALLQKGMVDLARKYDEEMLS 210
Query: 206 KGI 208
KG+
Sbjct: 211 KGL 213
>gi|296085435|emb|CBI29167.3| unnamed protein product [Vitis vinifera]
Length = 192
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 145/224 (64%), Positives = 171/224 (76%), Gaps = 36/224 (16%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
MD+RGV K L+SYSIYMDI CKSGKPW+AVKLYKEMKKKGI++DVVAYNTVIRA+G+SEG
Sbjct: 1 MDRRGVCKSLYSYSIYMDIQCKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEG 60
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
VDF++RV+REM+E+GC+P+VVT NT+IKLLCENGR+REAY V +M +KG P+VITYHC
Sbjct: 61 VDFSIRVFREMKEVGCEPNVVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPNVITYHC 120
Query: 288 FFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
FF WGFLRPVF+VWKKMEE GCSP
Sbjct: 121 FF------------------------------------GWGFLRPVFIVWKKMEEQGCSP 144
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTK 391
D AYNAL+DAL+ KGM+D+ARKY+EEM AKGLSAKPR +LGTK
Sbjct: 145 DACAYNALIDALVQKGMVDLARKYEEEMLAKGLSAKPRVDLGTK 188
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 14/118 (11%)
Query: 165 WEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT-----VI 219
+ EM + G ++ +Y+ + ++C++G+ +A ++ +M++KG +V+ Y+ +
Sbjct: 68 FREMKEVGCEPNVVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPNVITYHCFFGWGFL 127
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
R V + V+++M E GC P N +I L + G V A EM KG
Sbjct: 128 RPVFI---------VWKKMEEQGCSPDACAYNALIDALVQKGMVDLARKYEEEMLAKG 176
>gi|224123678|ref|XP_002319139.1| predicted protein [Populus trichocarpa]
gi|222857515|gb|EEE95062.1| predicted protein [Populus trichocarpa]
Length = 518
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 147/390 (37%), Positives = 209/390 (53%), Gaps = 15/390 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E LS NDW+ A FF W + H+ Y+S+I ILGK +FD +W LI M+
Sbjct: 60 EVLSRVRNDWEAAFTFFLWAARQPGYAHSVREYHSMISILGKMRKFDTAWVLIDEMRGVK 119
Query: 62 S--SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVI 118
+ S+ T IM ++Y H V A+ TF F + + +L+ ALC YK+V
Sbjct: 120 TGVSLVTPQTLLIMIRKYCAVHDVGRAINTFYAYKRFKFDMGIEEFQSLLSALCRYKNVQ 179
Query: 119 EAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCRE---FWEEMDKRGVVK 175
+A++L + NK V +N TK +N++L GW + G RE W EM KRG+
Sbjct: 180 DAEQLMYC-NKAV-----FPLN-TKSFNIVLNGWCNL--IGSPRESERVWREMSKRGIRF 230
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
D+ SY+ M K+G ++ ++LYK+MKK GI+ D YN VI A+ V+ A +
Sbjct: 231 DVVSYASMMSCYSKAGSLYRVLRLYKQMKKIGIEPDRKVYNAVIHALAKGRLVNEAFNLM 290
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP 295
+ M E G P++VT N++IK LC +V EA +M K+ P + TYH F R L
Sbjct: 291 KTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLKRCISPTIRTYHAFLRILRTG 350
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
E+ L ++M + G +P DTY+ML+RKF RW L VF +W +M E G SPD +Y L
Sbjct: 351 EEVFALLEKMRKMGCQPINDTYIMLIRKFCRWRQLENVFKLWDEMSENGISPDRSSYIVL 410
Query: 356 VDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
+ L G LD A KY EM K L +P+
Sbjct: 411 IHGLFLNGELDAAHKYYTEMKEKQLLPEPK 440
>gi|356570295|ref|XP_003553325.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Glycine max]
Length = 516
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 143/405 (35%), Positives = 212/405 (52%), Gaps = 14/405 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E L NDW+ A FF W + H+ Y+S+I ILGK +FD +WNLI M+
Sbjct: 67 EVLLRTRNDWEAAFTFFLWAGKQPGYAHSIREYHSMISILGKMRKFDTAWNLIEEMRRGR 126
Query: 62 S--SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVI 118
+ S+ T IM ++Y H V A+ TF +F + + + +L+ ALC YK+V
Sbjct: 127 TGPSLVTPQTLLIMIRKYCAVHDVARAINTFYAYKQFNFQVGLEEFHSLLSALCRYKNVQ 186
Query: 119 EAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKM-SWWGKCREFWEEMDKRGVVKDL 177
+A+ L F NKN L ++ TK +N+IL GW + W EM KR + D+
Sbjct: 187 DAEHLLFC-NKN-----LFPLD-TKSFNIILNGWCNLIVSTSHAERIWHEMSKRRIQHDV 239
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
SY + KS K +K ++++ EMKK+ I D YN VI A+ V A+ +
Sbjct: 240 VSYGSIISCYSKSSKLYKVLRMFDEMKKRKITPDRKVYNAVIYALAKGRLVKEAVNLIGT 299
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
+ + P+VVT N++IK LC+ G+V EA + E+ K+ P + T+H FFR L E
Sbjct: 300 LEDNDVTPNVVTYNSLIKPLCKAGKVDEAKQLFYEILKRHLSPTIQTFHAFFRILRTKEE 359
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ L D+M E G P ++TY+ML+RKF RW L VF +W M E G D +Y L+
Sbjct: 360 VFELLDKMKELGCYPTIETYIMLMRKFCRWRQLDDVFKMWDAMREDGIGHDRSSYIVLIH 419
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQS 402
L G L+ A Y EM KG +P+ E +++Q + G+Q+
Sbjct: 420 GLFLNGKLEEAHTYYAEMQEKGFLPEPKTE---EMLQAWVSGKQA 461
>gi|225436259|ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Vitis vinifera]
Length = 566
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 146/409 (35%), Positives = 213/409 (52%), Gaps = 20/409 (4%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKD-- 59
E LS N W+ A FF W + H+ Y+S+I ILGK +FD +W LI M+
Sbjct: 118 EVLSRVRNHWEAAFTFFLWAAKQPGYAHSLRAYHSMISILGKMRKFDTAWALIDEMRGGR 177
Query: 60 NPSSIPNHATFRIMFKRYVTAHLVNEAMGTF--NKLDEFGLKDEVSYCNLVDALCEYKHV 117
+S+ T IM +RY H V +A+ TF +K +FG+ E + NL+ ALC YK+V
Sbjct: 178 TGTSLVTPHTLSIMIRRYCAVHDVGKAINTFYAHKQFKFGVGIE-EFQNLLSALCRYKNV 236
Query: 118 IEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCRE---FWEEMDKRGVV 174
+A++L F F TK +N+IL GW + G RE FW EM RG+
Sbjct: 237 QDAEQLLFCNRNVFPFD-------TKSFNIILNGWCNV--IGSMREAERFWREMSNRGIQ 287
Query: 175 KDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRV 234
+D+ SYS + K K +KL+ +MK+ I D YN V+ A+ + V A+ +
Sbjct: 288 RDVVSYSSIISCYSKVTNLNKVLKLFNQMKEMEIAPDRKVYNAVVHALAKASFVKEALNL 347
Query: 235 YREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
+ M G P VT N++IK L ++ EA V EM ++G P + TYH FFR L+
Sbjct: 348 MKAMEGKGIAPDSVTYNSLIKPLSRARKINEAKEVFDEMLQRGLSPTIRTYHAFFRILKS 407
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
E+ L ++M E+G P DTY+ML+R+F RW L VF +W +M E G PD +Y
Sbjct: 408 GEEVFMLLEKMKETGCHPDKDTYIMLIRRFCRWRQLDNVFKLWSEMSENGVGPDRSSYIV 467
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQSG 403
L+ L G L+ A KY EM K +P+ E ++Q + G+++
Sbjct: 468 LIHGLFLNGKLEEAYKYYIEMKEKQFLPEPKTE---DMLQAWISGKETA 513
>gi|297807523|ref|XP_002871645.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317482|gb|EFH47904.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 524
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 142/405 (35%), Positives = 209/405 (51%), Gaps = 17/405 (4%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E LS NDW+ A FF W + + Y+S+I ILGK +FD +W LI M+
Sbjct: 81 EILSQVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFS 140
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEA 120
S+ N T IM ++Y H V +A+ TF+ F L+ + + +L+ ALC YK+V +A
Sbjct: 141 PSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDA 200
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCRE---FWEEMDKRGVVKDL 177
+ L F F K +N++L GW + G RE W EM GV D+
Sbjct: 201 EHLIFCNKDTYPFDA-------KSFNIVLNGWCNV--IGSPREAERVWMEMGNVGVKHDV 251
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
SYS + K G K +KL+ MKK+ I+ D YN VI A+ + V A + +
Sbjct: 252 VSYSSMISCYSKGGSLNKVLKLFDRMKKESIEPDRKVYNAVIHALAKASFVSEARNLMKT 311
Query: 238 MRE-MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR 296
M E G +P+VVT N++IK LC+ + EA V EM +KG P + TYH F R L
Sbjct: 312 MEEEKGMEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGE 371
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
E+ L +M + G +P +DTY+ML+RK RW V ++W +M+E G PD +Y ++
Sbjct: 372 EVFELLAKMRKMGCQPTVDTYIMLIRKLCRWRDFDNVLLLWNEMKEKGVGPDLSSYIVMI 431
Query: 357 DALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
L G ++ A Y +EM KG+ +P E + ++Q G+Q
Sbjct: 432 HGLFLNGKIEEAYGYYKEMKEKGM--RPNENV-EDMIQSWFSGKQ 473
>gi|255568998|ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535282|gb|EEF36959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 581
Score = 228 bits (580), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 137/390 (35%), Positives = 201/390 (51%), Gaps = 15/390 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E LS NDW+ A FF W ++H+ Y+++I ILGK +FD +W LI M+
Sbjct: 132 EVLSRIRNDWEAAFTFFLWAGRQLGYSHSVREYHAMISILGKMRKFDTAWALIDEMRGVK 191
Query: 62 S--SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVI 118
+ S+ T IM ++Y H V A+ TF F + + +L+ ALC YK+V
Sbjct: 192 TGISLVTPQTLLIMIRKYCAVHDVGRAINTFYAHKRFKFDLGIDEFQSLLSALCRYKNVQ 251
Query: 119 EAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCRE---FWEEMDKRGVVK 175
+A+ L F F+ TK +N++L GW + G RE W EM KR +
Sbjct: 252 DAEHLMFCNKDVFPFN-------TKSFNIVLNGWCNV--IGSPREADRIWREMCKRRIHY 302
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
D+ SY+ + K+G +K KLY +MK+ GI+ D YN+VI A+ V A+ +
Sbjct: 303 DVVSYASIISCYSKAGNLYKVFKLYNQMKEVGIEPDRKIYNSVIFALAKGRHVSEAINLM 362
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP 295
+ M E G P+ VT N++IK LC ++ EA + EM + G P + TYH FFR L
Sbjct: 363 KTMEEKGIAPNTVTYNSLIKPLCRARKIDEARGLFDEMLQHGHSPTIRTYHAFFRSLRTG 422
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
E+ L + M + G P +DTY+ML+RKF RW VF +W ++ E G PD +Y L
Sbjct: 423 EEVFALLENMRKLGCHPTIDTYIMLIRKFCRWRQFDDVFKLWNQISENGLGPDRSSYIVL 482
Query: 356 VDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
+ L G L+ A K+ +M K L P+
Sbjct: 483 IHGLFLNGKLEEAYKFYADMKEKQLLPDPK 512
>gi|356560394|ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Glycine max]
Length = 612
Score = 227 bits (578), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 210/405 (51%), Gaps = 14/405 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKD-- 59
E LS NDW+ A FF W + H+ Y+S+I ILGK +FD +WNLI M+
Sbjct: 163 EVLSRTRNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLIEEMRGGR 222
Query: 60 NPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVI 118
N S+ T IM ++Y H V A+ TF F + + + +L+ ALC YK+V
Sbjct: 223 NGLSLVTPQTLLIMIRKYCAVHDVARAINTFYAYKRFNFRVGLEEFHSLLSALCRYKNVQ 282
Query: 119 EAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKM-SWWGKCREFWEEMDKRGVVKDL 177
+A+ L F NK+V ++ TK +N+IL GW + W EM KR + D+
Sbjct: 283 DAEYLLFC-NKDV-----FPLD-TKSFNIILNGWCNLIVSTSHAERIWHEMIKRRIQHDV 335
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
SY + KS K +K ++++ EMKK+ I D YN VI A+ V A+ +
Sbjct: 336 VSYGSIISCYSKSSKLYKVLRMFDEMKKRKITPDRKVYNAVIYALAKGRLVKEAVNLIGT 395
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
M P VVT N++IK LC+ +V EA + EM K+ P + T+H FFR L E
Sbjct: 396 MEGNDVTPDVVTYNSLIKPLCKAHKVDEAKQLFDEMLKRHLSPTIQTFHAFFRILRTKEE 455
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ L D+M E P ++TY+ML+RKF RW L VF +W M E S D +Y L+
Sbjct: 456 VFELLDKMKELRCYPTIETYIMLIRKFCRWCQLDDVFKIWDAMREDEISHDRSSYIVLIH 515
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQS 402
L G L+ A++Y EM KG +P+ E +++Q + G+Q+
Sbjct: 516 GLFLNGKLEEAQRYYAEMQEKGFLPEPKTE---EMLQAWVSGKQA 557
>gi|449431996|ref|XP_004133786.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Cucumis sativus]
gi|449477985|ref|XP_004155184.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Cucumis sativus]
Length = 485
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/386 (36%), Positives = 195/386 (50%), Gaps = 10/386 (2%)
Query: 3 TLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP- 61
LS NDW+ A FF W + H+ Y+S+I ILGK +FD +W LI M+
Sbjct: 49 VLSRIRNDWEAAFTFFVWAGKQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTP 108
Query: 62 -SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIE 119
SS+ T IM +RY H V +A+ TF FG + + +L+ ALC YK+V +
Sbjct: 109 GSSLVTPQTLLIMIRRYCAVHDVAKAINTFYAHKRFGFNIGLEEFQSLLSALCRYKNVKD 168
Query: 120 AQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
A+ L F F+ TK +N+IL GW + W+EM +RG+ D S
Sbjct: 169 AEYLLFCNKDVFPFN-------TKSFNIILNGWCVIGSLRDTERVWKEMTRRGISHDAVS 221
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y+ + K K ++L+++MK+ I D YN VI ++ + A + + M
Sbjct: 222 YASCISCYSKVRNLHKVLRLFEDMKRMKIDPDRKVYNAVIHSLAKGRCLKEAADLIKTME 281
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL 299
E G +VVT N+VIK LC+ R EA AV E+ ++G P + TYH F R L EI
Sbjct: 282 EKGIIANVVTYNSVIKPLCKARRFDEARAVFEELLQRGLCPTIQTYHAFLRFLRTEEEIF 341
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
L +M G P DTY+ML+RKF RW L V +W +M E G SPD +Y L+ L
Sbjct: 342 ELLKKMRTMGCNPTTDTYIMLIRKFCRWRQLDNVSRIWHEMSENGISPDRSSYIVLIHGL 401
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPR 385
G L+ A KY EM K L +P+
Sbjct: 402 FLNGKLEDAHKYYLEMKEKDLLPEPK 427
>gi|357508583|ref|XP_003624580.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499595|gb|AES80798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 138/404 (34%), Positives = 207/404 (51%), Gaps = 14/404 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E LS NDW+ A FF W + H+ Y+S+I +LGK FD +W L+ M+
Sbjct: 136 EVLSRVRNDWEAAFTFFLWAGKQPGYDHSVREYHSMISVLGKMRRFDTAWALVEEMRRGK 195
Query: 62 S--SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVI 118
+ SI T IM ++Y H V A+ TF F + + + L+ ALC YK+V
Sbjct: 196 TGESIVTPQTLLIMIRKYCAVHDVGRAINTFYAFKRFNFQVGLYEFQGLLSALCRYKNVQ 255
Query: 119 EAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCRE-FWEEMDKRGVVKDL 177
+A+ L F NKNV TK +N+IL GW + + E WEEM KR + D+
Sbjct: 256 DAEHLLFC-NKNVFPLD------TKSFNIILNGWCNLIVSARNAERIWEEMSKRRIQHDV 308
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
SY+ + KS K ++ ++L+++MKK+ I D YN VI ++ + V A+ + +
Sbjct: 309 VSYASIISCYSKSSKLYRVLQLFEQMKKRNITPDRKVYNAVIFSLAKNRMVKEAVNLIIK 368
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
M + P +T N++IK LC+ ++ EA + M ++G P + T+H FFR L E
Sbjct: 369 MEDNNVTPDAITYNSLIKPLCKARKIDEAKEIFNVMLERGISPSIRTFHAFFRILRVKEE 428
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ L D+M E G P ++TY+ML+RKF RW L V +W M E G D +Y L+
Sbjct: 429 VFELLDKMKELGCNPTIETYIMLIRKFCRWRQLDEVKRIWNAMREDGIGHDRSSYIVLIH 488
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
L ++ A KY EM KG +P+ E ++Q L G Q
Sbjct: 489 GLFLNCKVEEAYKYYIEMQEKGFLPEPKTE---SMLQAWLSGRQ 529
>gi|255582957|ref|XP_002532249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528067|gb|EEF30143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 507
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 135/390 (34%), Positives = 208/390 (53%), Gaps = 11/390 (2%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+ L + +DWK AL FFNWV + YN ++DILGK FD ++ M
Sbjct: 85 KVLKRHRSDWKPALIFFNWVSKGGKVLMGSGAYNEILDILGKMRRFDELSQVLDIMSKR- 143
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA 120
+ N T+R++ RY AH V EA+ FN + GL+ D VS+ NL+ LC YKHV A
Sbjct: 144 EGLVNEETYRVLVNRYAAAHKVEEAIEIFNTRRDIGLEIDLVSFQNLLMFLCRYKHVQIA 203
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+ L + + K+ G K N++L GW + + + FW+++ DL +Y
Sbjct: 204 ESLLYSKGKDFGMD-------IKTMNIVLNGWCVLGNVHEAKRFWKDIIGSKCKPDLFTY 256
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
++ + K GK A+K+Y+ M +K K DVV N +I A+ V A+ V+REM +
Sbjct: 257 GTFIKALTKKGKLGTALKIYRAMWEKQCKPDVVICNCIIDALCFKNRVPEALEVFREMSQ 316
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM-PKKG-CVPDVITYHCFFRCLEKPREI 298
GC P+ T N++IK R+ + Y +L EM KKG C+PD IT++ + L+KP E+
Sbjct: 317 QGCLPNGATYNSLIKHFSRIRRMEKVYELLDEMLDKKGSCMPDHITFNYLLKALKKPEEL 376
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+ +RM +G DTY ++LR + W V W +ME+LG PD +Y ++
Sbjct: 377 PLVLERMERNGCMISTDTYNLILRLYADWDCEERVGDTWNEMEKLGLGPDRRSYTIMIHW 436
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAKPREEL 388
L +KG ++ A Y EM +KG+ ++PR E+
Sbjct: 437 LYEKGRINDALHYFGEMTSKGMVSEPRTEM 466
>gi|334187687|ref|NP_197005.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635761|sp|Q9LFQ4.2|PP383_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g15010, mitochondrial; Flags: Precursor
gi|332004721|gb|AED92104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 572
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/405 (34%), Positives = 206/405 (50%), Gaps = 17/405 (4%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E LS NDW+ A FF W + + Y+S+I ILGK +FD +W LI M+
Sbjct: 132 EILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFS 191
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEA 120
S+ N T IM ++Y H V +A+ TF+ F L+ + + +L+ ALC YK+V +A
Sbjct: 192 PSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDA 251
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCRE---FWEEMDKRGVVKDL 177
L F F K +N++L GW + G RE W EM GV D+
Sbjct: 252 GHLIFCNKDKYPFDA-------KSFNIVLNGWCNV--IGSPREAERVWMEMGNVGVKHDV 302
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
SYS + K G K +KL+ MKK+ I+ D YN V+ A+ + V A + +
Sbjct: 303 VSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKT 362
Query: 238 MRE-MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR 296
M E G +P+VVT N++IK LC+ + EA V EM +KG P + TYH F R L
Sbjct: 363 MEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGE 422
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
E+ L +M + G P ++TY+ML+RK RW V ++W +M+E PD +Y ++
Sbjct: 423 EVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMI 482
Query: 357 DALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
L G ++ A Y +EM KG+ +P E + ++Q G+Q
Sbjct: 483 HGLFLNGKIEEAYGYYKEMKDKGM--RPNENV-EDMIQSWFSGKQ 524
>gi|9755668|emb|CAC01820.1| putative protein [Arabidopsis thaliana]
Length = 532
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 139/405 (34%), Positives = 206/405 (50%), Gaps = 17/405 (4%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E LS NDW+ A FF W + + Y+S+I ILGK +FD +W LI M+
Sbjct: 92 EILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFS 151
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEA 120
S+ N T IM ++Y H V +A+ TF+ F L+ + + +L+ ALC YK+V +A
Sbjct: 152 PSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDA 211
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCRE---FWEEMDKRGVVKDL 177
L F F K +N++L GW + G RE W EM GV D+
Sbjct: 212 GHLIFCNKDKYPFDA-------KSFNIVLNGWCNV--IGSPREAERVWMEMGNVGVKHDV 262
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
SYS + K G K +KL+ MKK+ I+ D YN V+ A+ + V A + +
Sbjct: 263 VSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKT 322
Query: 238 MRE-MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR 296
M E G +P+VVT N++IK LC+ + EA V EM +KG P + TYH F R L
Sbjct: 323 MEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGE 382
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
E+ L +M + G P ++TY+ML+RK RW V ++W +M+E PD +Y ++
Sbjct: 383 EVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMI 442
Query: 357 DALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
L G ++ A Y +EM KG+ +P E + ++Q G+Q
Sbjct: 443 HGLFLNGKIEEAYGYYKEMKDKGM--RPNENV-EDMIQSWFSGKQ 484
>gi|224117122|ref|XP_002317482.1| predicted protein [Populus trichocarpa]
gi|222860547|gb|EEE98094.1| predicted protein [Populus trichocarpa]
Length = 433
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 134/410 (32%), Positives = 217/410 (52%), Gaps = 16/410 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+ L + +DWK A FFNWV + + ++ YN ++DILG+ F+ ++ M
Sbjct: 8 KVLKRHRSDWKPAYIFFNWVSKEGTISLSSCVYNEILDILGRMRRFEELTLVLDEMSKRE 67
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA 120
+ + T+R++ RY AH+V EA+G FNK E GL+ D VS+ L+ LC YKHV A
Sbjct: 68 GFV-DEDTYRVLVNRYAGAHMVEEAIGAFNKRRELGLELDLVSFQKLLMYLCRYKHVDVA 126
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+ L + G K N++L GW + + + FW+++ D+ +Y
Sbjct: 127 ETLLHSKGHEFGVD-------IKTMNIVLNGWCVLGNVREAKRFWKDIIASKCKPDVFTY 179
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
++ + GK A+KLY+ M K K DVV N VI A+ + V A+ V+ M+E
Sbjct: 180 GTFIKALTNKGKLGTAMKLYEAMWKMQCKPDVVICNCVIDALCFKKRVPEALAVFEGMKE 239
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK--GCVPDVITYHCFFRCLEKPREI 298
GC P+V T N++IK +C+ GR+ + Y +L EM +K C+PD IT++ + L+KP E+
Sbjct: 240 RGCIPNVATYNSLIKHMCKIGRMEKVYELLDEMQEKKGSCMPDEITFNYLLKSLKKPEEV 299
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
G+ +RM +G + DT +LL+ W V W++ME+ G D +Y ++
Sbjct: 300 AGVLERMKINGCKMNNDTCNLLLKLHADWDSEEKVRYTWEEMEKNGLGLDRRSYTIMIHW 359
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAKPREE-----LGTKLVQGGLDGEQSG 403
L DKG ++ A +Y EM KG+ +PR + + T+ + +GE+S
Sbjct: 360 LYDKGRVEDALRYFGEMENKGMVPEPRTKILCNSMNTRKQKEAEEGEKSA 409
>gi|357134597|ref|XP_003568903.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Brachypodium distachyon]
Length = 537
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/393 (32%), Positives = 203/393 (51%), Gaps = 9/393 (2%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS-IPNH 67
++W+ AL FFNW + H TY ++DILG+ + L L + + + +
Sbjct: 124 SNWQVALLFFNWAAGLPAYAHGPRTYTEMLDILGRMKKVKLMTQLFDEIPEERRGLVVTN 183
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFG 126
TF ++ RY AH V EA+ F K ++G + D V + L+ +LC YKHV EA+ L
Sbjct: 184 RTFAVLLNRYAGAHKVQEAIEMFYKRKDYGFEVDLVGFQILLMSLCRYKHVEEAEALFL- 242
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
K F ++ K +N+IL GW + W ++ + DL +Y +++
Sbjct: 243 -QKKDEFPPVI-----KSWNIILNGWCVKGSLPDAKRIWNQIIASKLKPDLFTYGTFINS 296
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+ K+GK AVKL+ M +KGI DV N +I + + + A+ ++REM + GCQ
Sbjct: 297 LTKAGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKKIPEALDIFREMTDRGCQAD 356
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMI 306
V T NT+IK C+ R + Y +L +M KGC P+ +TY + EKP++++ L RM
Sbjct: 357 VATYNTLIKYFCKIRRTEKVYELLDDMENKGCSPNNMTYSYILKTTEKPKDVIHLLQRME 416
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
+SG R DTY ++L + + V VW +ME G PD+ ++ +V L +G LD
Sbjct: 417 KSGCRLDSDTYNLILNLYVSMKYENGVQQVWDEMERNGSGPDQRSFTIMVHGLHSQGRLD 476
Query: 367 MARKYDEEMFAKGLSAKPREELGTKLVQGGLDG 399
A +Y M ++G++ +PR + K + DG
Sbjct: 477 QALQYYTTMKSRGMTPEPRTRILVKAIHMKKDG 509
>gi|125524449|gb|EAY72563.1| hypothetical protein OsI_00429 [Oryza sativa Indica Group]
Length = 535
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/388 (32%), Positives = 203/388 (52%), Gaps = 9/388 (2%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMK-DNPSSIPNH 67
++WK AL FF W + H + Y ++DILG+ + L L + ++ S+ +
Sbjct: 124 SNWKVALSFFKWAAGLPQYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPMESRQSVITN 183
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFG 126
F ++ RY AH V EA+ F K ++G + D V + L+ +LC YKHV EA+ L
Sbjct: 184 RMFAVLLNRYAGAHKVQEAIDMFYKRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFL- 242
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
K F ++ K +N+IL GW + W E+ + DL +Y +++
Sbjct: 243 -QKKDEFPPVI-----KSWNIILNGWCVKGSLADAKRVWNEIIASKLKPDLFTYGTFINS 296
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+ KSGK AVKL+ M +KGI DV N +I + + + A+ ++ EM + GCQ
Sbjct: 297 LTKSGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKRIPEALEIFGEMNDRGCQAD 356
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMI 306
V T NT+IK C+ R+ + Y +L +M KG P+ +TY + EKP++++ L RM
Sbjct: 357 VATYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTYSYILKTTEKPKDVISLMQRME 416
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
+SG R DTY ++L + W + + V +VW +ME G PD+ ++ +V L G LD
Sbjct: 417 KSGCRLDSDTYNLILNLYVSWDYEKGVQLVWDEMERNGSGPDQRSFTIMVHGLHSHGKLD 476
Query: 367 MARKYDEEMFAKGLSAKPREELGTKLVQ 394
A Y M ++G++ +PR +L K ++
Sbjct: 477 EALHYYRTMESRGMTPEPRTKLLVKAIR 504
>gi|326531326|dbj|BAK05014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 537
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/397 (31%), Positives = 208/397 (52%), Gaps = 12/397 (3%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS-IPNH 67
++W+ AL FF W + H TY ++DILG+ + L L + + + +
Sbjct: 124 SNWQVALLFFTWAAGLPTYEHGPRTYIEMLDILGRMKKVRLMRQLFDEIPEQRRGLVVTN 183
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFG 126
F ++ RY AH V EA+ F K +++G + D V + L+ +LC YKHV EA+ L
Sbjct: 184 RMFAVLLNRYAGAHKVQEAIEIFYKRNDYGFEVDLVGFQILLMSLCRYKHVEEAEALFL- 242
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
K F ++ K +N+IL GW + W E+ + DL +Y +++
Sbjct: 243 -QKKDEFPPVI-----KSWNIILNGWCVKGSLPDAKRVWNEIIASKLKPDLFTYGTFINA 296
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+ K+GK AVKL+ M +KGI DV N +I + + + A++++ EM + GCQ
Sbjct: 297 LTKAGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKKIPEALKIFGEMNDRGCQAD 356
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMI 306
V T NT+IK C+ R + Y +L +M KKGC P+ +TY + EKPR+++ L RM
Sbjct: 357 VATYNTLIKHFCKIRRTEKVYELLDDMEKKGCSPNNMTYTYILKTTEKPRDVMNLIQRME 416
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
ESG + DTY ++L + + + V VW++ME G PD+ ++ +V L +G LD
Sbjct: 417 ESGCKLDSDTYNLILNLYVSMKYEKGVQQVWEEMERNGSGPDQRSFTIMVHGLHSQGQLD 476
Query: 367 MARKYDEEMFAKGLSAKPREELGTKLV---QGGLDGE 400
A +Y M ++G++ +PR + K + +GG + E
Sbjct: 477 QALQYYTTMKSRGMTPEPRTRILVKAIHIKKGGPETE 513
>gi|297719649|ref|NP_001172186.1| Os01g0151900 [Oryza sativa Japonica Group]
gi|9663979|dbj|BAB03620.1| hypothetical protein [Oryza sativa Japonica Group]
gi|13872936|dbj|BAB44041.1| hypothetical protein [Oryza sativa Japonica Group]
gi|215768885|dbj|BAH01114.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255672883|dbj|BAH90916.1| Os01g0151900 [Oryza sativa Japonica Group]
Length = 534
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/388 (32%), Positives = 205/388 (52%), Gaps = 9/388 (2%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMK-DNPSSIPNH 67
++WK AL FF W + H + Y ++DILG+ + L L + ++ S+ +
Sbjct: 124 SNWKVALSFFKWAAGLPQYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPVESRQSVVTN 183
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFG 126
F ++ RY AH V EA+ F K ++G + D V + L+ +LC YKHV EA+ L F
Sbjct: 184 RMFAVLLNRYAGAHKVQEAIDMFYKRKDYGFELDLVGFQILLMSLCRYKHVEEAEAL-FL 242
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
+ K+ F ++ K +N+IL GW + W E+ + DL +Y +++
Sbjct: 243 QKKD-EFPPVI-----KSWNIILNGWCVKGSLADAKRVWNEIIASKLKPDLFTYGTFINS 296
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+ KSGK AVKL+ M +KGI DV N +I + + + A+ ++ EM + GCQ
Sbjct: 297 LTKSGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKRIPEALEIFGEMNDRGCQAD 356
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMI 306
V T NT+IK C+ R+ + Y +L +M KG P+ +TY + EKP++++ L RM
Sbjct: 357 VATYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTYSYILKTTEKPKDVISLMQRME 416
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
+SG R DTY ++L + W + + V +VW +ME G PD+ ++ +V L LD
Sbjct: 417 KSGCRLDSDTYNLILNLYVSWDYEKGVQLVWDEMERNGSGPDQRSFTIMVHGLHSHDKLD 476
Query: 367 MARKYDEEMFAKGLSAKPREELGTKLVQ 394
A Y M ++G++ +PR +L K ++
Sbjct: 477 EALHYYRTMESRGMTPEPRTKLLVKAIR 504
>gi|125569053|gb|EAZ10568.1| hypothetical protein OsJ_00400 [Oryza sativa Japonica Group]
Length = 514
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/388 (31%), Positives = 202/388 (52%), Gaps = 9/388 (2%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMK-DNPSSIPNH 67
++WK AL FF W + H + Y ++DILG+ + L L + ++ S+ +
Sbjct: 104 SNWKVALSFFKWAAGLPQYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPVESRQSVVTN 163
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFG 126
F ++ RY AH V EA+ F K ++G + D V + L+ +LC YKHV EA+ L
Sbjct: 164 RMFAVLLNRYAGAHKVQEAIDMFYKRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFL- 222
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
K F ++ K +N+IL GW + W E+ + DL +Y +++
Sbjct: 223 -QKKDEFPPVI-----KSWNIILNGWCVKGSLADAKRVWNEIIASKLKPDLFTYGTFINS 276
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+ KSGK AVKL+ M +KGI DV N +I + + + A+ ++ EM + GCQ
Sbjct: 277 LTKSGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKRIPEALEIFGEMNDRGCQAD 336
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMI 306
V T NT+IK C+ R+ + Y +L +M KG P+ +TY + EKP++++ L RM
Sbjct: 337 VATYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTYSYILKTTEKPKDVISLMQRME 396
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
+SG R DTY ++L + W + + V +VW +ME G PD+ ++ +V L LD
Sbjct: 397 KSGCRLDSDTYNLILNLYVSWDYEKGVQLVWDEMERNGSGPDQRSFTIMVHGLHSHDKLD 456
Query: 367 MARKYDEEMFAKGLSAKPREELGTKLVQ 394
A Y M ++G++ +PR +L K ++
Sbjct: 457 EALHYYRTMESRGMTPEPRTKLLVKAIR 484
>gi|225461528|ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Vitis vinifera]
Length = 546
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 125/391 (31%), Positives = 197/391 (50%), Gaps = 12/391 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVE---TDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMK 58
+ L + +DW+ A FFNW + ++ +N ++DILG+ F L M
Sbjct: 123 DVLKRHRSDWRPAYVFFNWASRCGIESGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMS 182
Query: 59 DNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHV 117
+ N TF ++ RY AH EA+ FNK G + D +++ L+ +LC YKHV
Sbjct: 183 KRKGLV-NERTFGVLLNRYAAAHKTEEAVKIFNKRKGLGFELDLIAFQTLLMSLCRYKHV 241
Query: 118 IEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
E E F KN + MN +IL GW + + + FW ++ D
Sbjct: 242 -EMAEFLFHSKKNEFPPDIKSMN------VILNGWCVLGSLREAKRFWNDIITSKCKPDK 294
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
+Y I+++ + K+GK AVKL++ M +KG DV N +I A+ + + A+ V RE
Sbjct: 295 FTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLRE 354
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
M E CQP V T N++IK LC+ R + Y +L +M +KGC+P+ TY + +KP E
Sbjct: 355 MNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGYLLKSTKKPEE 414
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ G+ +RM +G R D Y ++L+ + WG+ + +ME G PD+ Y ++
Sbjct: 415 VPGILERMERNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEMERNGMGPDQRTYTIMIH 474
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPREEL 388
L DKG +D A Y ++M G+ +PR L
Sbjct: 475 GLYDKGRMDDALSYFKQMTLMGMVPEPRTTL 505
>gi|242056423|ref|XP_002457357.1| hypothetical protein SORBIDRAFT_03g005950 [Sorghum bicolor]
gi|241929332|gb|EES02477.1| hypothetical protein SORBIDRAFT_03g005950 [Sorghum bicolor]
Length = 543
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 207/396 (52%), Gaps = 9/396 (2%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSIPNH 67
++W+ AL FFNW T + H + Y ++DILG+ + L + ++ + +
Sbjct: 130 SNWQVALAFFNWAATLPGYAHGSRAYTEMLDILGRMKKVRHMRQLFDEIPEERRVVVVTN 189
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFG 126
F ++ RY AH V EA+ F ++G + D V + L+ +LC YKHV EA+ L F
Sbjct: 190 KMFAVLLNRYAGAHKVQEAIEVFYLRKDYGFELDLVGFQILLMSLCRYKHVEEAEAL-FR 248
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
E K+ F + TK +N+IL GW + W ++ V +DL +Y +++
Sbjct: 249 EKKD-EFPHV-----TKSWNIILNGWCVKGSLRDAQRIWNDIIASKVERDLFTYGTFINA 302
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+ K+G+ AVKL+K+M + GI DV N +I + + A+ ++ EM + CQ
Sbjct: 303 LAKNGRISAAVKLFKKMWETGINPDVAICNCIIDQLCFKNRIPEALEIFGEMNDRLCQAD 362
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMI 306
V T NT+IK LC+ R+ + Y +L +M KGC P+ TY + EKP++++ L RM
Sbjct: 363 VATYNTLIKYLCKKKRMEKVYELLDDMEAKGCSPNNRTYSYVLKTTEKPKDVIALMQRME 422
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
++G DTY ++L + W + + V VW +ME G PD+ ++ +V L +G LD
Sbjct: 423 QTGCELDSDTYNLILNLYTNWKYEKGVQQVWDEMERNGSGPDQRSFTIMVHGLHSQGKLD 482
Query: 367 MARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQS 402
A +Y M ++G+ +PR ++ K + DG +
Sbjct: 483 EALQYYTTMKSRGMIPEPRTKILVKAMHMKKDGAAT 518
>gi|147793827|emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]
Length = 546
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 124/391 (31%), Positives = 196/391 (50%), Gaps = 12/391 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVE---TDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMK 58
+ L + +DW+ A FFNW + ++ +N ++DILG+ F L M
Sbjct: 123 DVLKRHRSDWRPAYVFFNWASRCGXESGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMS 182
Query: 59 DNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHV 117
+ N TF ++ RY AH EA+ F K G + D +++ L+ +LC YKHV
Sbjct: 183 KR-KGLXNERTFGVLLNRYAAAHKTEEAVKIFYKRKGLGFELDLIAFQTLLMSLCRYKHV 241
Query: 118 IEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
E E F KN + MN +IL GW + + + FW ++ D
Sbjct: 242 -EMAEFLFHSKKNEFPPDIKSMN------VILNGWCVLGSLREAKRFWNDIITSKCKPDK 294
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
+Y I+++ + K+GK AVKL++ M +KG DV N +I A+ + + A+ V RE
Sbjct: 295 FTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLRE 354
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
M E CQP V T N++IK LC+ R + Y +L +M +KGC+P+ TY + +KP E
Sbjct: 355 MNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGYLLKSTKKPEE 414
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ G+ +RM +G R D Y ++L+ + WG+ + +ME G PD+ Y ++
Sbjct: 415 VPGILERMERNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEMERNGMGPDQRTYTIMIH 474
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPREEL 388
L DKG +D A Y ++M G+ +PR L
Sbjct: 475 GLYDKGRMDDALSYFKQMTLMGMVPEPRTTL 505
>gi|226495005|ref|NP_001148062.1| GTP binding protein [Zea mays]
gi|195615570|gb|ACG29615.1| GTP binding protein [Zea mays]
Length = 535
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 121/396 (30%), Positives = 209/396 (52%), Gaps = 9/396 (2%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSIPNH 67
++W+ AL FFNW T + H + Y ++DILG+ + L + ++ + +
Sbjct: 122 SNWQVALAFFNWAATLPGYAHGSRAYTEMLDILGRMKKVRHMRQLFDEIPEERRQVVVTN 181
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFG 126
F ++ RY AH V EA+ F ++G + D V + L+ +LC YKHV EA+ L F
Sbjct: 182 KMFAVLLNRYAGAHKVQEAIEVFYLRKDYGFELDLVGFQILLMSLCRYKHVEEAEAL-FR 240
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
E K+ F + TK +N+IL GW + W ++ V +DL ++ +++
Sbjct: 241 EKKD-EFPHV-----TKSWNIILNGWCVKGSLRDAQRIWNDIIASKVERDLFTFGTFINA 294
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+ K+G+ AVKL+K+M +KGI DV N +I + + + A+ ++ EM + CQ
Sbjct: 295 LAKNGRISAAVKLFKQMWEKGINPDVAICNCIIDQLCFKKKIPEALEIFGEMNDRLCQAD 354
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMI 306
V T NT+IK +C+ R+ + Y +L +M KGC P+ TY + EKP++++ L RM
Sbjct: 355 VATYNTLIKYMCKIKRMEKVYELLDDMEAKGCSPNNRTYSYILKTTEKPKDVIALMQRME 414
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
SG + D Y ++L + +W + + + +W +ME G PD+ ++ +V L +G LD
Sbjct: 415 RSGCKLDSDMYNLILNLYIKWKYEKGMQQIWDEMERRGSGPDQRSFTIMVHGLHSQGKLD 474
Query: 367 MARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQS 402
A +Y M ++G+ +PR ++ K + DG +
Sbjct: 475 EALQYYTTMKSRGMIPEPRTKILAKAMHMKKDGSAA 510
>gi|212274591|ref|NP_001130971.1| GTP binding protein [Zea mays]
gi|194690592|gb|ACF79380.1| unknown [Zea mays]
gi|413947420|gb|AFW80069.1| GTP binding protein [Zea mays]
Length = 535
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 209/396 (52%), Gaps = 9/396 (2%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSIPNH 67
++W+ AL FFNW T + H + Y ++DILG+ + L + ++ + +
Sbjct: 122 SNWQVALAFFNWAATLPGYAHGSRAYTEMLDILGRMKKVRHMRQLFDEIPEERRQVVVTN 181
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFG 126
F ++ RY AH V EA+ F ++G + D V + L+ +LC YKHV EA+ L F
Sbjct: 182 KMFAVLLNRYAGAHKVQEAIEVFYLRKDYGFELDLVGFQILLMSLCRYKHVEEAEAL-FR 240
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
E K+ F + TK +N+IL GW + W ++ V +DL ++ +++
Sbjct: 241 EKKD-EFPHV-----TKSWNIILNGWCVKGSLRDAQRIWNDIIASKVERDLFTFGTFINA 294
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+ K+G+ AVKL+K+M +KGI DV N +I + + + A+ ++ EM + CQ
Sbjct: 295 LAKNGRISAAVKLFKQMWEKGINPDVAICNCIIDQLCFKKKIPEALEIFGEMNDRLCQAD 354
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMI 306
V T NT+IK +C+ R+ + Y +L +M KGC P+ TY + EKP++++ L RM
Sbjct: 355 VATYNTLIKYMCKIKRMEKVYELLDDMEAKGCPPNNRTYSYILKTTEKPKDVIALMQRME 414
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
+G + D Y ++L + +W + + + +W +ME G PD+ ++ +V L +G LD
Sbjct: 415 RTGCKLDSDIYNLILNLYIKWKYEKGMQQIWDEMERRGSGPDQRSFTIMVHGLHSQGKLD 474
Query: 367 MARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQS 402
A +Y M ++G+ +PR ++ K + DG +
Sbjct: 475 EALQYYTTMKSRGMIPEPRTKILVKAMHMKKDGAAT 510
>gi|125528152|gb|EAY76266.1| hypothetical protein OsI_04202 [Oryza sativa Indica Group]
Length = 528
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 125/386 (32%), Positives = 192/386 (49%), Gaps = 14/386 (3%)
Query: 18 FNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRY 77
F W + Y+S++ IL K FD + L+ +M+ SS+ + A ++ +RY
Sbjct: 132 FRWASAQPGYAPGRHAYHSMLAILAKHRRFDDARALLDQMRR--SSLASPAAVMLLIRRY 189
Query: 78 VTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNVGFSGL 136
A V A+ F L G + V+ + L+ ALC YK+V +A+ L K F
Sbjct: 190 CAARDVAGAVAAFRALPSLGFRPGVAEFHGLLTALCRYKNVQDAEHLLLSSEKEFPF--- 246
Query: 137 VEMNKTKIYNMILRGWFKM-SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK 195
+TK +N++L GW M + + FW M+ +G+ +D+ SY + K+G
Sbjct: 247 ----ETKSFNVVLNGWCNMVRSVREAKRFWNAMEIKGIKRDVVSYGSMISCFSKAGSLDT 302
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
+KL+ MK+ G+ D YN V+ A+ V+ A + R M E G P T N++I+
Sbjct: 303 VMKLFNRMKEAGVVPDRKIYNAVVYALAKGRCVNEAKALVRSMEEKGVAPDTATFNSLIR 362
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMD 315
LC+ +V+EA +L +M +G P V T+H P E+ L D+M E P+MD
Sbjct: 363 PLCKARQVQEARKMLDDMLGRGLSPSVRTFHALLDVARSPIEVFDLLDKMKELQCDPEMD 422
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
T++ML+RKF RW V +W M G SPD AY L+ L G L+ + KY EEM
Sbjct: 423 TFIMLIRKFCRWRQHDSVEKLWSAMPANGLSPDRSAYIVLIHGLFLNGRLEESAKYYEEM 482
Query: 376 FAKGLSAKPREELGTKLVQGGLDGEQ 401
AKG P E+ +++Q L G +
Sbjct: 483 KAKGF---PPEKKTEEMIQAWLSGRE 505
>gi|116789117|gb|ABK25122.1| unknown [Picea sitchensis]
Length = 572
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/378 (34%), Positives = 194/378 (51%), Gaps = 11/378 (2%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D K A F W + ++HT Y+++I ILG +FD W LI +M + ++ N T
Sbjct: 152 DGKAAFRVFQWAGSQPDYSHTVSVYHTMISILGVHRKFDKGWGLIRKMHER--AMVNRQT 209
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGEN 128
IM KRY AH +A+ TF+ +D+F L D + L+ ALC V EA+EL
Sbjct: 210 LMIMIKRYAAAHDARKAIKTFHAMDKFKLAADSDDFLCLLCALCRNMFVEEAEEL----- 264
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSW-WGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
+ F+ +TK +N+IL GW + + + WEEM + D SY+ +
Sbjct: 265 --IHFNKKCYPLETKSFNVILYGWCNIFVDVYQVKRLWEEMSNLCITPDAFSYTTVICCF 322
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
K+GK + V+LY EMKKKG ++ YN VI + V A+ ++ ++REMG P+
Sbjct: 323 SKAGKFYDVVRLYDEMKKKGFTPNLKVYNAVIYVLSKERCVKEALNLFNKIREMGFHPNA 382
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIE 307
VT +I LLC + EAY+ L +M +G VP + YH FFR +E I LFD+M E
Sbjct: 383 VTYTYLIYLLCRTWKPEEAYSYLDKMIMEGFVPTIDIYHAFFRFVENEGAICKLFDKMFE 442
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
+G P M+TY+M +R+ W F +W ME+ S D + L++ + G +
Sbjct: 443 NGCAPTMETYIMSIRRCCSWSDYENAFKLWNDMEKHWFSADSSIHYLLLNGFLLNGKPEE 502
Query: 368 ARKYDEEMFAKGLSAKPR 385
A K EM G S +P+
Sbjct: 503 ACKCYREMKVNGFSLEPK 520
>gi|297720523|ref|NP_001172623.1| Os01g0816000 [Oryza sativa Japonica Group]
gi|56785065|dbj|BAD82704.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125572420|gb|EAZ13935.1| hypothetical protein OsJ_03862 [Oryza sativa Japonica Group]
gi|255673815|dbj|BAH91353.1| Os01g0816000 [Oryza sativa Japonica Group]
Length = 530
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 124/386 (32%), Positives = 192/386 (49%), Gaps = 14/386 (3%)
Query: 18 FNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRY 77
F W + +S++ IL K FD + L+ +M+ SS+ + A ++ +RY
Sbjct: 134 FRWASAQPGYAPGRHACHSMLAILAKHRRFDDARALLDQMRR--SSLASPAAVMLLIRRY 191
Query: 78 VTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNVGFSGL 136
A V A+ F L G + V+ + L+ ALC YK+V +A+ L K F
Sbjct: 192 CAARDVAGAVAAFRALPNLGFRPGVAEFHGLLTALCRYKNVQDAEHLLLSSEKEFPF--- 248
Query: 137 VEMNKTKIYNMILRGWFKMSWWGK-CREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK 195
+TK +N++L GW M + + FW M+ +G+ +D+ SY + K+G
Sbjct: 249 ----ETKSFNVVLNGWCNMVRSVREAKRFWNAMEIKGIKRDVVSYGSMISCFSKAGSLDT 304
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
+KL+ MK+ G+ D YN V+ A+ + V+ A + R M E G P T N++I+
Sbjct: 305 VMKLFNRMKEAGVIPDRKIYNAVVYALAKGQCVNEAKALVRSMEEKGVAPDTATFNSLIR 364
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMD 315
LC+ +V+EA +L +M +G P V T+H P E+ L D+M E P+MD
Sbjct: 365 PLCKARQVQEARKMLDDMLGRGLSPSVRTFHALLDVARSPIEVFDLLDKMKELQCDPEMD 424
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
T++ML+RKF RW V +W M G SPD AY L+ L G L+ + KY EEM
Sbjct: 425 TFIMLIRKFCRWRQHDSVEKLWSAMPANGLSPDRSAYIVLIHGLFLNGRLEESAKYYEEM 484
Query: 376 FAKGLSAKPREELGTKLVQGGLDGEQ 401
AKG P E+ +++Q L G +
Sbjct: 485 KAKGF---PPEKKTEEMIQAWLSGRE 507
>gi|449444202|ref|XP_004139864.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Cucumis sativus]
gi|449502917|ref|XP_004161779.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Cucumis sativus]
Length = 532
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 123/393 (31%), Positives = 203/393 (51%), Gaps = 15/393 (3%)
Query: 2 ETLSCYANDWKRALEFFNWV----ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM 57
+ L + +DW A FFNWV + FT + YN ++ ILGKF F+ ++ M
Sbjct: 128 KVLRRHRSDWNPAFIFFNWVLKRGTNEEKFTPGSVIYNEILVILGKFRRFEEVDKVLVEM 187
Query: 58 KDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKH 116
+ N T+ ++ RY AH V EA+ F + EFGL+ + +++ +L+ LC YKH
Sbjct: 188 SKRKELV-NEETYSVLLNRYAAAHKVEEAISIFYRRQEFGLEMNLIAFQSLLMWLCRYKH 246
Query: 117 VIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
V EA E F K+ + + K N+IL GW + + + FW E+ + D
Sbjct: 247 V-EAAETLFHSKKHEFVTDI------KTSNIILNGWCVLGNVHEAKRFWREIIESKCEPD 299
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
+++Y ++ + K GK A+KL++ M ++G+ DVV N +I A+ + + A+ +++
Sbjct: 300 IYTYGTLINSLTKKGKLGTALKLFRAMWERGLTTDVVICNCIIDALCFKKRIPEALEIFK 359
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK--GCVPDVITYHCFFRCLEK 294
EM E GC +V T NT+IK LC+ R+ + +L EM ++ C P+ +T+ +
Sbjct: 360 EMNERGCAANVATYNTLIKHLCKIRRMEKVNELLNEMEERKGSCWPNSVTFIYLLGSVRG 419
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
P E+ LF RM SG + D Y ++LR + W V W +M+E+G PD +Y
Sbjct: 420 PEEVPVLFQRMERSGCKMTSDIYNLILRLYMDWDIQERVKSTWNEMKEMGLGPDRRSYTI 479
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLSAKPREE 387
++ L +KG +Y EM KG+ +P+ E
Sbjct: 480 MIHGLYEKGRTKDGLRYFNEMTLKGIMPEPKTE 512
>gi|356546852|ref|XP_003541836.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Glycine max]
Length = 481
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 120/390 (30%), Positives = 210/390 (53%), Gaps = 11/390 (2%)
Query: 2 ETLSCYANDWKRALEFFNWV-ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDN 60
+ L + +DW+ A FFNW +T + ++D N ++DILGK F ++ M
Sbjct: 72 DVLRRHRSDWRPAHVFFNWASKTTTGYQPSSDVCNEIVDILGKMQRFQELHQVLDEMSKR 131
Query: 61 PSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIE 119
+ + A F + +R+V AH V+EA+ F + EFGL+ + ++ L+ LC YKHV +
Sbjct: 132 -EELLDEAVFATLVRRFVGAHKVDEAIQLFYRRKEFGLELNSEAFRTLLMWLCRYKHVED 190
Query: 120 AQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
A+ L F + G ++M +N+IL GW + + + W ++ D+ +
Sbjct: 191 AEAL-FHNSVKKGLRADIKM-----WNVILNGWCVLGNSHEAKRVWRDIVASPCKPDIFT 244
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y+ ++ + K GK A+KL++ M KG K DVV N +I A+ + + A+ ++ +M
Sbjct: 245 YATFIKALTKKGKLGTALKLFRGMWDKGGKPDVVICNCIIDALCFKKRIPEALEIFCDMS 304
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK--GCVPDVITYHCFFRCLEKPRE 297
E GC+P+V T N++IK +C+ R+++ Y ++ EM +K C+P+ +TY + L++P E
Sbjct: 305 ERGCEPNVATYNSLIKYMCKIQRMKKVYELVDEMERKKGSCLPNAVTYCYLLKSLKEPGE 364
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ + +RM +G D Y M+LR + +W V W++ME G PD +Y ++
Sbjct: 365 VCRVLERMERNGCGMNDDVYNMVLRLYMKWDDGDGVRKTWEEMERNGWGPDRRSYTIMIH 424
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPREE 387
+KG + A +Y EEM +KG+ + R E
Sbjct: 425 ENFEKGRVKDAVRYLEEMISKGMVPERRTE 454
>gi|357131182|ref|XP_003567219.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Brachypodium distachyon]
Length = 518
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 129/401 (32%), Positives = 191/401 (47%), Gaps = 14/401 (3%)
Query: 3 TLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPS 62
LS N W A F W + +S++ IL K FD + L+ M+
Sbjct: 106 ALSRLRNSWAAAHAAFLWAAAQPDYAPGRHACHSMLAILAKHRRFDDARALLDEMRRKSL 165
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQ 121
+ P ++ +RY A V A+ F+ L FG + V+ + L+ ALC YK+V +A+
Sbjct: 166 ASPR--AVLLLVRRYCAARDVTRAIAAFHALPSFGFEPGVAQFHGLLSALCRYKNVQDAE 223
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGK-CREFWEEMDKRGVVKDLHSY 180
L K F +TK +N++L GW M + + FW M+ RG+ +D+ SY
Sbjct: 224 HLLLSSEKEFPF-------ETKSFNIVLNGWCNMVCSVREAKRFWTAMEVRGIERDVASY 276
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ K+G +KL+ MK+ GI D YN V+ A+ VD A + R M E
Sbjct: 277 GSMISCFSKAGSLDSVLKLFNGMKEAGIVPDRKVYNAVVYALAKGRCVDEAKALVRSMEE 336
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG 300
G P T N++I LC+ +V+EA + EM +G + V T+H F P E+
Sbjct: 337 RGTPPDTATYNSLIGPLCKARQVQEATQMFDEMIGRGLLASVRTFHALFDVATSPSEVFD 396
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+ D+M P++DTY+ML+RKF RW V +W M G +PD AY L+ L
Sbjct: 397 VLDKMKTLHCEPEIDTYIMLIRKFCRWRQHDSVEKLWSAMPTNGLNPDRSAYIVLIHGLF 456
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
G L+ A KY EEM AKG P E+ ++Q L G +
Sbjct: 457 LNGKLEEAAKYYEEMKAKGF---PPEQKTESMIQAWLTGRE 494
>gi|147776335|emb|CAN67560.1| hypothetical protein VITISV_012728 [Vitis vinifera]
Length = 191
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 128/179 (71%), Gaps = 17/179 (9%)
Query: 175 KDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK--------------MDVVAYNTVIR 220
KD YS +D +C+ +A +L+ K + +DVVAYN VIR
Sbjct: 13 KDETRYSNLIDALCEYKHVIEAEELFIRESKDLVFNDDVKIYDMILRGWLDVVAYNAVIR 72
Query: 221 AVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVP 280
A+G+SEGVDF++RVYREM+E+GC+P+VVT +T+IKLLCE+GR+REAY VL +M +K C P
Sbjct: 73 AIGLSEGVDFSIRVYREMKELGCEPNVVTYDTIIKLLCEHGRIREAYGVLDQMREKDCAP 132
Query: 281 DVITYHCFFRCLEKPREILGLFDRMIES-GIRPKMDTYVMLLRKFGRWG--FLRPVFVV 336
+V+TYHCFF CLEKP++I +FDRMI S G +MDTYVML++KFGRWG LRPVF+V
Sbjct: 133 NVMTYHCFFGCLEKPKQIFRMFDRMINSVGGLGRMDTYVMLMKKFGRWGILLLRPVFIV 191
>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
Length = 534
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 187/367 (50%), Gaps = 12/367 (3%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
AL FFNW F H+ YN +ID+ GK +F L+W LI MK I TF ++
Sbjct: 131 ALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVEI-TVVTFSML 189
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
+RYV A L EA+ FN+++++G D +++ N++ LC+ + +EAQ F +N
Sbjct: 190 VRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQS--FFDNLKHK 247
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
F V +Y ++ GW + + + EM G+ ++++YSI +D +C+SG+
Sbjct: 248 FEPDV-----IVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQ 302
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
+A ++ EM G + V +N +IR + + ++VY +M+ + C ++T N
Sbjct: 303 ITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNF 362
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESG 309
+I+ C++ + EA VL M K C P+ +++ FRC+ K +++ G +F RM E G
Sbjct: 363 LIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVG 422
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
+P TY +L+R F +F + K+M+E P+ Y L+ G + A
Sbjct: 423 CKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNHAY 482
Query: 370 KYDEEMF 376
+ EM
Sbjct: 483 MFFREMI 489
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 106/261 (40%), Gaps = 34/261 (13%)
Query: 83 VNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQE-----LCFGENKN-VGFSG 135
++EA F ++ G+ V +Y ++DALC + A + L G N N V F+
Sbjct: 268 ISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNN 327
Query: 136 LVEM--------------NKTK---------IYNMILRGWFKMSWWGKCREFWEEMDKRG 172
L+ + N+ K YN ++ K G+ + M K
Sbjct: 328 LIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKND 387
Query: 173 VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM 232
+ S++ + KS A +++ MK+ G K + V YN ++R V + D
Sbjct: 388 CTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSADMIF 447
Query: 233 RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV-PDVITYHCFFRC 291
++ +EM E +P+ T +I L C G AY EM + C+ P + Y
Sbjct: 448 KLKKEMDEEEVEPNFNTYRELIALYCGMGHWNHAYMFFREMIDEKCIKPSMPLYKMVLEE 507
Query: 292 LEKPREILG---LFDRMIESG 309
L K ++ L D+M+E G
Sbjct: 508 LRKAGQLKKHEELVDKMVERG 528
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 4/177 (2%)
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+G + YN +I G + A + M+ + +VVT + +++ G E
Sbjct: 142 EGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVEITVVTFSMLVRRYVRAGLAAE 201
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLR 322
A M GC D+I + L K R E FD + + P + Y L+
Sbjct: 202 AVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNL-KHKFEPDVIVYTSLVH 260
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ R G + V+++M+ G SP+ + Y+ ++DAL G + A EM G
Sbjct: 261 GWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAG 317
>gi|255542990|ref|XP_002512558.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548519|gb|EEF50010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 511
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 210/414 (50%), Gaps = 26/414 (6%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+TL ++ K AL FF++ + + T TYN +IDIL K +FD+SW LI +M N
Sbjct: 74 QTLLRLRHNSKIALSFFHYSLSLPSSSVNTTTYNLIIDILSKVRQFDVSWQLIIQMDQNN 133
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK--DEVSYCNLVDALCEYKHVIE 119
PN TF I+ +R ++A +A+ F+ ++ F + ++ +C L+D LC+Y ++
Sbjct: 134 LQ-PNSHTFLILIRRLISAGFTRQAIRAFDDMESFIAETVNQTHFCFLLDTLCKYGYIKV 192
Query: 120 AQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
A E+ F + K F L + +IY +++ GW K+ F EMD+ G+ ++ +
Sbjct: 193 AVEV-FNKRK---FRFLPNV---RIYTVLIYGWCKIGRIDMAERFIREMDEMGIEANVVT 245
Query: 180 YSIYMDIMCKSGK----------PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVD 229
Y++ +D +C+ K KA K++ EM++KGI+ DV +++ ++ +
Sbjct: 246 YNVLLDGICRRAKLQPEGRFERTIMKADKVFDEMRQKGIEPDVTSFSILLHVYSRAHKPQ 305
Query: 230 FAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF 289
+ + M EMG P+V T +V+K LC GR+ +A +L +M + G P+ TY+CFF
Sbjct: 306 LTVDKLKLMEEMGICPTVATYTSVLKCLCSCGRIDDAEELLEQMVRNGVSPNAATYNCFF 365
Query: 290 ---RCLEKPREILGLFDRMIESGI-RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
R + P L L+ ++ + + P + TY +LL F + V +W + G
Sbjct: 366 KEYRGRKDPETALKLYRKIRQENLCDPSVHTYNILLGMFMKLNRFNIVNEIWNDLRSSGS 425
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR--EELGTKLVQGGL 397
PD +Y LV L +K A ++ EM KGL + E L L+Q +
Sbjct: 426 GPDLDSYTLLVHGLCEKQKWQKACQFFVEMIEKGLLPQKATFEMLYAGLIQSNM 479
>gi|297834384|ref|XP_002885074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330914|gb|EFH61333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 517
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 197/390 (50%), Gaps = 11/390 (2%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E ++ +DWK A + + ++ YN ++D+LGK F+ ++ M
Sbjct: 108 EVVNRNRSDWKPAYILSRLIVKHSVYISSSLVYNEILDVLGKMRRFEEFHQVVDEMSKRD 167
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEA 120
+ + T+ ++ RY AH V+EA+G F + EFG++D+ V++ L+ LC YKHV A
Sbjct: 168 GFV-DEKTYEVLLNRYAAAHKVDEAVGVFERRREFGIEDDLVAFHGLLMWLCRYKHVEFA 226
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+ L + G + N+IL GW + + + W+++ D+ SY
Sbjct: 227 ETLFCSRRREFGCD-------IRTMNIILNGWCVLGNVHEAKRIWKDIIASKCKPDVVSY 279
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
++ + K GK KA++LY+ + + G DV N VI A+ + + A+ V++EM E
Sbjct: 280 GTMINALTKKGKLGKAMELYRALWETGRNPDVKICNNVIDALCFKKRIPEALEVFKEMSE 339
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG--CVPDVITYHCFFRCLEKPREI 298
G P+VVT N+++K LC+ R + + ++ EM KG C P+ +T+ + ++ +++
Sbjct: 340 KGPSPNVVTYNSLLKHLCKIRRTEKVWELVEEMEHKGGSCSPNDVTFGYLLKYSQRSKDV 399
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+ +RM ++ D Y ++ R + +W V +W +ME G PD+ Y +
Sbjct: 400 DAVLERMAKNKCEMTSDLYNLMFRLYVQWDNEEKVREIWGEMERSGLGPDQRTYTIRIHG 459
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAKPREEL 388
L KG + A Y +EM +KG+ +PR E+
Sbjct: 460 LHTKGKIGEALSYFQEMMSKGMVPEPRTEM 489
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 109/273 (39%), Gaps = 18/273 (6%)
Query: 40 ILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK 99
+LG E W I K P + ++ M + +AM + L E G
Sbjct: 253 VLGNVHEAKRIWKDIIASKCKPDVV----SYGTMINALTKKGKLGKAMELYRALWETGRN 308
Query: 100 DEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWW 158
+V CN ++DALC K + EA E+ F E G S V YN +L+ K+
Sbjct: 309 PDVKICNNVIDALCFKKRIPEALEV-FKEMSEKGPSPNV-----VTYNSLLKHLCKIRRT 362
Query: 159 GKCREFWEEMDKRGVVKDLHSYSI-YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
K E EEM+ +G + + Y+ + K AV + M K +M YN
Sbjct: 363 EKVWELVEEMEHKGGSCSPNDVTFGYLLKYSQRSKDVDAV--LERMAKNKCEMTSDLYNL 420
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
+ R + + ++ EM G P T I L G++ EA + EM KG
Sbjct: 421 MFRLYVQWDNEEKVREIWGEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKG 480
Query: 278 CVPDVITYHCFFRCLEKPREILGLFDRMIESGI 310
VP+ T + KPR + D+M+ S +
Sbjct: 481 MVPEPRTEMLLNQNKTKPR----VEDKMLRSNL 509
>gi|255580475|ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529358|gb|EEF31324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 201/402 (50%), Gaps = 15/402 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E L +N AL FF W E F + T++YN++ID LGK +F++ WNL++ MK
Sbjct: 118 EVLKRLSNAGALALSFFKWAEKQKGFMYNTESYNALIDSLGKIKQFNMIWNLVNDMKRK- 176
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
+ TF ++ +RY + V EAM TF K+++FGLK E + N L+D L + + V+ A
Sbjct: 177 -GVLTKETFALISRRYARSGKVKEAMNTFEKMEKFGLKIESTDFNRLLDTLIKSRQVLSA 235
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
Q + F + K F + K Y ++L GW + K E + EM G D+ +Y
Sbjct: 236 QNV-FDKMKIRRF-----VPDIKSYTILLEGWGQEKNLLKLDEVYREMKDEGFEPDVVTY 289
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
I ++ CK K A++L++EM+ K + + T+I +G + A+ +R +
Sbjct: 290 GILINAYCKVRKYDDAIELFREMESKNCQPSPHIFCTLINGLGSVRRLSEALEFFRRSKA 349
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPRE 297
G P T N V+ C + R+ +AY ++ EM K G P+ TY L EK E
Sbjct: 350 SGFAPETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSGVGPNSRTYDIILHHLIKAEKTTE 409
Query: 298 ILGLFDRM-IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
+F++M E P + TY +++R F + VW +M+ G P ++ L+
Sbjct: 410 AFSVFEKMSSEEECEPTVSTYDIIVRMFCNMDKVESAIKVWDRMKAKGVHPGMHMFSILI 469
Query: 357 DALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLD 398
++L + LD+A KY +EM G+ +P L + L Q ++
Sbjct: 470 NSLCHENKLDIACKYFQEMLDVGI--RPPAALFSHLKQALIE 509
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 113/264 (42%), Gaps = 24/264 (9%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQEL 123
P+ T+ I+ Y ++A+ F +++ + +C L++ L + + EA E
Sbjct: 284 PDVVTYGILINAYCKVRKYDDAIELFREMESKNCQPSPHIFCTLINGLGSVRRLSEALEF 343
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F +K GF+ +T YN ++ + +EM K GV + +Y I
Sbjct: 344 -FRRSKASGFAP-----ETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSGVGPNSRTYDII 397
Query: 184 MDIMCKSGKPWKAVKLYKEMK-KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ + K+ K +A ++++M ++ + V Y+ ++R + V+ A++V+ M+ G
Sbjct: 398 LHHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCNMDKVESAIKVWDRMKAKG 457
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLF 302
P + + +I LC ++ A EM G P F L++
Sbjct: 458 VHPGMHMFSILINSLCHENKLDIACKYFQEMLDVGIRPPA----ALFSHLKQA------- 506
Query: 303 DRMIESGIRPKMDTYVMLLRKFGR 326
+IE G + DT V+L +K +
Sbjct: 507 --LIEDG---RKDTVVLLAQKIDK 525
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 109/249 (43%), Gaps = 24/249 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +I+ K ++D + L M ++ + P+ F + + ++EA+ F +
Sbjct: 288 TYGILINAYCKVRKYDDAIELFREM-ESKNCQPSPHIFCTLINGLGSVRRLSEALEFFRR 346
Query: 93 LDEFGLKDEV-SYCNLVDALC-------EYKHVIEAQELCFGENKNVGFSGLVEMNKTKI 144
G E +Y +V A C Y+ V E ++ G N ++
Sbjct: 347 SKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSGVGPN-------------SRT 393
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVK-DLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
Y++IL K + +E+M + + +Y I + + C K A+K++ M
Sbjct: 394 YDIILHHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCNMDKVESAIKVWDRM 453
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
K KG+ + ++ +I ++ +D A + ++EM ++G +P + + + L E+GR
Sbjct: 454 KAKGVHPGMHMFSILINSLCHENKLDIACKYFQEMLDVGIRPPAALFSHLKQALIEDGR- 512
Query: 264 REAYAVLAE 272
++ +LA+
Sbjct: 513 KDTVVLLAQ 521
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 190/367 (51%), Gaps = 12/367 (3%)
Query: 13 RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
+AL FFNW + FTH + YN +ID+ GK FDL W +I MK I + TF I
Sbjct: 124 QALSFFNWATSRPGFTHHPEPYNEMIDLAGKVRNFDLGWQVIDLMKARNVEI-SIETFSI 182
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNV 131
+ +RYV A L +EA+ FN+++++ K D++++ L+ LC + EAQ F K+
Sbjct: 183 LIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRRATEAQSF-FDSLKDK 241
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
++ +Y ++RGW + + + EM G + ++++Y+I +D +C+ G
Sbjct: 242 FEPDVI------VYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCG 295
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
+ +A ++ EM G + + + +N ++R + + ++VY +M+ MGC P VT N
Sbjct: 296 QITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYN 355
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIES 308
+I+ C++G + EA VL M KKGC P+ T++ F + K R++ G L+ +M E
Sbjct: 356 FLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKEL 415
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
+ TY +L+R F V + K+M+E P+ Y L+ G + A
Sbjct: 416 KCKANTVTYNILMRMFVDTKSTDMVLKLKKEMDEDDVEPNVNTYCVLIAMYCGMGHWNNA 475
Query: 369 RKYDEEM 375
K+ EM
Sbjct: 476 YKFFREM 482
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 104/239 (43%), Gaps = 33/239 (13%)
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
+ +++++R + + + + M+ D ++SI + I+C+ + +A +
Sbjct: 178 ETFSILIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRRATEAQSFFDS 237
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
+K K + DV+ Y ++R + + A RV+ EM+ GC P+V T VI LC G+
Sbjct: 238 LKDK-FEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQ 296
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLR 322
+ A+ V AEM GC P+ I T+ LLR
Sbjct: 297 ITRAHDVFAEMLDVGCEPNSI--------------------------------TFNNLLR 324
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ G V V+ +M+ +GC PD YN L+++ G LD A K M KG S
Sbjct: 325 VHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCS 383
>gi|15232517|ref|NP_188138.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273407|sp|Q9LIL5.1|PP233_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15200
gi|11994509|dbj|BAB02574.1| unnamed protein product [Arabidopsis thaliana]
gi|332642110|gb|AEE75631.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 193/390 (49%), Gaps = 11/390 (2%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E ++ +DWK A V ++ YN ++D+LGK F+ + M
Sbjct: 114 EVVNRNRSDWKPAYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRD 173
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEA 120
+ N T+ ++ RY AH V+EA+G F + EFG+ D+ V++ L+ LC YKHV A
Sbjct: 174 GFV-NEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFA 232
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+ L + G K NMIL GW + + + FW+++ D+ SY
Sbjct: 233 ETLFCSRRREFGCD-------IKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSY 285
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
++ + K GK KA++LY+ M DV N VI A+ + + A+ V+RE+ E
Sbjct: 286 GTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISE 345
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG--CVPDVITYHCFFRCLEKPREI 298
G P+VVT N+++K LC+ R + + ++ EM KG C P+ +T+ + ++ +++
Sbjct: 346 KGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDV 405
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+ +RM ++ D Y ++ R + +W V +W +ME G PD+ Y +
Sbjct: 406 DIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHG 465
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAKPREEL 388
L KG + A Y +EM +KG+ +PR E+
Sbjct: 466 LHTKGKIGEALSYFQEMMSKGMVPEPRTEM 495
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 99/248 (39%), Gaps = 14/248 (5%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQEL 123
P+ ++ M + +AM + + + +V CN ++DALC K + EA E+
Sbjct: 280 PDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEV 339
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F E G V YN +L+ K+ K E EEM+ +G +
Sbjct: 340 -FREISEKGPDPNV-----VTYNSLLKHLCKIRRTEKVWELVEEMELKG--GSCSPNDVT 391
Query: 184 MDIMCKSGKPWKAVKLYKE-MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ K + K V + E M K +M YN + R + + ++ EM G
Sbjct: 392 FSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSG 451
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLF 302
P T I L G++ EA + EM KG VP+ T + KPR +
Sbjct: 452 LGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRTEMLLNQNKTKPR----VE 507
Query: 303 DRMIESGI 310
D+M+ S +
Sbjct: 508 DKMLRSNL 515
>gi|357444525|ref|XP_003592540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481588|gb|AES62791.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 507
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 194/386 (50%), Gaps = 20/386 (5%)
Query: 4 LSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
L+ +N AL FF W E F H T+ ++++I+ LGK +F + WNL+ MK
Sbjct: 93 LNKLSNAGILALSFFRWAEKQQGFNHNTEIFHALIEALGKIRQFKMIWNLVDEMKQR--K 150
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYK-HVIEAQ 121
+ N TF ++ +RYV A ++ EA+ TF +++++GLK ++S N L+D LC+ K HV +AQ
Sbjct: 151 LLNGDTFSLIARRYVRAKVIKEALKTFERMEKYGLKPQISDFNKLIDVLCKSKFHVEKAQ 210
Query: 122 ELCFGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
EL F + + N K Y +++ GW + K E EM G D+
Sbjct: 211 EL---------FDKMRQWNLEPNLKSYTILIEGWSQQQNLLKVDEVCREMKDDGFQPDVV 261
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+Y I ++ CK+ K +A+ +Y +M K + Y T I +G +D A + +
Sbjct: 262 TYGIIINAYCKAKKYDEAIGIYHDMLSKNVNPSPHIYCTFITGLGNGSRMDEAFEFFEKS 321
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---P 295
+ G P T N V+ C + R+ +AY ++ EM + G P+ TY L K
Sbjct: 322 KASGFPPEAPTYNAVVSAYCWSMRIDDAYRIVGEMKELGIGPNARTYDIILVHLIKGGRT 381
Query: 296 REILGLFDRM-IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
+E +F RM E+G P + TY +++R F L VVW +M++ G P ++
Sbjct: 382 KEAYSVFQRMSSETGCEPSVSTYAIMVRMFCNENQLDMAMVVWNEMKDKGILPGIHMFST 441
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGL 380
L+ +L + LD A +Y ++M G+
Sbjct: 442 LIISLCHENKLDDACRYFQQMLDVGI 467
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 100/233 (42%), Gaps = 14/233 (6%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQEL 123
P+ T+ I+ Y A +EA+G ++ + + YC + L + EA E
Sbjct: 258 PDVVTYGIIINAYCKAKKYDEAIGIYHDMLSKNVNPSPHIYCTFITGLGNGSRMDEAFEF 317
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE---EMDKRGVVKDLHSY 180
F ++K GF + YN ++ + W + + + EM + G+ + +Y
Sbjct: 318 -FEKSKASGFPP-----EAPTYNAVVSAY---CWSMRIDDAYRIVGEMKELGIGPNARTY 368
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKK-GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
I + + K G+ +A +++ M + G + V Y ++R +D AM V+ EM+
Sbjct: 369 DIILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAIMVRMFCNENQLDMAMVVWNEMK 428
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
+ G P + +T+I LC ++ +A +M G P + F R L
Sbjct: 429 DKGILPGIHMFSTLIISLCHENKLDDACRYFQQMLDVGIRPTANMFSAFKRAL 481
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 95/226 (42%), Gaps = 9/226 (3%)
Query: 24 DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLV 83
D F TY +I+ K ++D + + H M + P+ + +
Sbjct: 253 DDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHDMLSKNVN-PSPHIYCTFITGLGNGSRM 311
Query: 84 NEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKT 142
+EA F K G E +Y +V A C + +A + GE K +G
Sbjct: 312 DEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIV-GEMKELGIGP-----NA 365
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKR-GVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
+ Y++IL K + ++ M G + +Y+I + + C + A+ ++
Sbjct: 366 RTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAIMVRMFCNENQLDMAMVVWN 425
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
EMK KGI + ++T+I ++ +D A R +++M ++G +P+
Sbjct: 426 EMKDKGILPGIHMFSTLIISLCHENKLDDACRYFQQMLDVGIRPTA 471
>gi|357128238|ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Brachypodium distachyon]
Length = 547
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 203/402 (50%), Gaps = 13/402 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E L +N AL FF W E F +T ++++++I+ LGK +F L W+L+ M+
Sbjct: 132 EVLRNLSNAGILALAFFRWAERQQGFRYTAESFHNLIEALGKIKQFRLVWSLVEAMRCR- 190
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
+ + TFR++ +RY A V EA+ TF K+ FGLK ++S N L+D L + K V +A
Sbjct: 191 -GLLSKDTFRLIVRRYARARKVKEAVETFEKMSSFGLKADLSDYNWLIDVLSKSKQVKKA 249
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+ +N F + K Y +++ GW + ++EM G+ D+ +Y
Sbjct: 250 HAIFKEMKRNGRF-----VPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGIKPDVVAY 304
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ CKSGK +A+K+++EM+ G Y +I +G E +D A++ + +
Sbjct: 305 GTLISSFCKSGKCDEAIKVFREMEANGCMPSPHVYCMLINGLGSEERLDEALKYFELSKA 364
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPRE 297
G V TCN V+ C + + + A+ ++ EM K G P+ TY + L +K E
Sbjct: 365 SGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKTGIGPNARTYDIILQYLIKSQKIEE 424
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+F RM G P+++TY M++ F + VWK+M+E G P +++L++
Sbjct: 425 AYNVFQRMGMEGCEPQLNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSSLIN 484
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDG 399
L + L+ A Y +EM KG+ +P +L + L + ++G
Sbjct: 485 GLCFENRLEEACVYFQEMLDKGI--RPPGQLFSNLKEALIEG 524
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 105/241 (43%), Gaps = 20/241 (8%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
Y ++I K + D + + M+ N +P+ + ++ + ++EA+ F
Sbjct: 303 AYGTLISSFCKSGKCDEAIKVFREMEAN-GCMPSPHVYCMLINGLGSEERLDEALKYFEL 361
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI------Y 145
G EV CN +V A C A F + EM KT I Y
Sbjct: 362 SKASGFPMEVPTCNAVVGAYCRSSKFQHA------------FKMVDEMRKTGIGPNARTY 409
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
++IL+ K + ++ M G L++Y++ + + C + + A+K++K+MK+
Sbjct: 410 DIILQYLIKSQKIEEAYNVFQRMGMEGCEPQLNTYTMMVGMFCSNERVDMALKVWKQMKE 469
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
KG+ + ++++I + ++ A ++EM + G +P + + + L E GR+
Sbjct: 470 KGVLPCMHMFSSLINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALIEGGRISL 529
Query: 266 A 266
A
Sbjct: 530 A 530
>gi|356534319|ref|XP_003535704.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Glycine max]
Length = 507
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 132/405 (32%), Positives = 201/405 (49%), Gaps = 16/405 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E L+ +N AL FF W E F HTT+ ++++I+ LGK +F + W L++ MK
Sbjct: 91 EVLNKLSNAGVLALSFFRWAEKQSEFKHTTEAFHALIEALGKIRQFKMIWTLVNDMKQR- 149
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
+ TF ++ +RY A EA+ TF K++ +GLK VS N LVD LC+ K V EA
Sbjct: 150 -KLLTSDTFSLVARRYARARKAKEAIKTFEKMEHYGLKPHVSDFNKLVDVLCKSKSVEEA 208
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
E+ F + + + + K Y ++L GW + K E EM+ +G D+ +Y
Sbjct: 209 HEV-FDKMRKLRLDPDI-----KSYTILLEGWSQQQNLIKVNEVCREMEDKGFQLDVVAY 262
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
I M+ CK+ K +A+ LY EMK +G++ Y T+I +G + +D A+ + +
Sbjct: 263 GIIMNAHCKAKKFDEAIGLYHEMKARGVRPSPHVYCTLINGLGSDKRLDEALEFFEVSKA 322
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI-- 298
G P T N V+ C + R+ +AY ++ EM K G P+ T+ L K R I
Sbjct: 323 SGFVPEAPTYNAVVGAYCWSLRMDDAYRMVGEMKKCGIGPNSRTFDIVLHHLIKGRRIEE 382
Query: 299 -LGLFDRMI--ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
+F RM E G P + TY +++R F L VW +M+ G P ++ L
Sbjct: 383 ASSVFRRMNGGEFGCEPSVSTYEIMVRMFCNEELLDMAVAVWDEMKGKGILPGMHMFSTL 442
Query: 356 VDALIDKGMLDMARKYDEEMFAKGL--SAKPREELGTKLVQGGLD 398
V AL + LD A KY +EM G+ AK L LV G++
Sbjct: 443 VCALCHESKLDEACKYFQEMLDVGIRPPAKMFSTLKEALVDAGME 487
>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Cucumis sativus]
Length = 542
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 205/402 (50%), Gaps = 15/402 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E L +N AL FF W E F HTT++YN +I+ LGK +F++ WNL+ MK
Sbjct: 127 EVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRK- 185
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
I + TF ++ +RY A V EA+ +F K+++FG + VS N L+D LC+ ++V +A
Sbjct: 186 -GILSRETFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKA 244
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
QE+ F + K+ F + K Y ++L GW + K E + EM G D+ ++
Sbjct: 245 QEV-FDKMKHGRFKPDI-----KSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTF 298
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
I ++ CK+ K +A++L+ EM+ K IK + T+I +G + + A+ + +++
Sbjct: 299 GILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKL 358
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPRE 297
G P T N V+ C + ++ AY ++ EM K G P+ TY L K +E
Sbjct: 359 SGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKE 418
Query: 298 ILGLFDRMI-ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
+F RM E G P + TY +++R F + +W +M+ G P ++ L+
Sbjct: 419 AYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLI 478
Query: 357 DALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLD 398
++L + L+ A Y +EM G+ +P + + L Q LD
Sbjct: 479 NSLCHEHKLEDACTYFQEMLDVGI--RPPATMFSNLKQALLD 518
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 134/303 (44%), Gaps = 36/303 (11%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + + K+A E F+ ++ F +Y +++ G+ L N ++R + P
Sbjct: 236 CKSRNVKKAQEVFDKMKHG-RFKPDIKSYTILLEGWGQDQNL-LKLNEVYREMRDEGFEP 293
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELC 124
+ TF I+ + A +EA+ F++++ +K +C L++ L K + EA E
Sbjct: 294 DVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEF- 352
Query: 125 FGENKNVGFSG------------------------LVEMNKT------KIYNMILRGWFK 154
F + K GF+ + EM K+ + Y++IL K
Sbjct: 353 FEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIK 412
Query: 155 MSWWGKCREFWEEMDKR-GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
+ ++ M + G L +Y I + + C + A++++ EMK KG+ +
Sbjct: 413 GRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMH 472
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
++T+I ++ ++ A ++EM ++G +P + + + L ++GR ++ ++AE
Sbjct: 473 LFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGR-KDTALLMAEK 531
Query: 274 PKK 276
KK
Sbjct: 532 IKK 534
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/237 (18%), Positives = 90/237 (37%), Gaps = 43/237 (18%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
K ALEFF ++ F TYN+V+ + ++ ++ M+ + PN T+
Sbjct: 347 KEALEFFEQLKLSG-FAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVG-PNSRTYD 404
Query: 72 IMFKRYVTAHLVNEAMGTFNKLD-EFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKN 130
I+ + EA F ++ E G + +S
Sbjct: 405 IILHHLIKGRKSKEAYSVFQRMSREPGCEPTLS--------------------------- 437
Query: 131 VGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS 190
Y++++R + + W+EM +GV+ +H +S ++ +C
Sbjct: 438 -------------TYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHE 484
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
K A ++EM GI+ ++ + +A+ D A+ + +++++ P V
Sbjct: 485 HKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALLMAEKIKKLRKAPLV 541
>gi|115436822|ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|56201654|dbj|BAD73118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532676|dbj|BAF05059.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|125570544|gb|EAZ12059.1| hypothetical protein OsJ_01942 [Oryza sativa Japonica Group]
Length = 540
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/402 (31%), Positives = 202/402 (50%), Gaps = 13/402 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E L +N AL FF W E F ++ + ++++I+ LGK +F L W+L+ M+
Sbjct: 125 EVLKNLSNAGILALAFFRWAERQQGFRYSAEGFHNLIEALGKIKQFRLVWSLVEAMRCR- 183
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
S + TF+I+ +RY A V EA+ TF K+ FGLK ++S N L+D L + K V +A
Sbjct: 184 -SCLSKDTFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKA 242
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+ F E K G + K Y +++ GW + ++EM G+ D+ +Y
Sbjct: 243 HAI-FKEMKRKGRF----IPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAY 297
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ + CKSGK +A+K++ EM++ G Y +I +G E +D A++ ++ +E
Sbjct: 298 GMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSKE 357
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPRE 297
G V TCN VI C A+ ++ EM K G P+ TY L EK E
Sbjct: 358 SGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEE 417
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
LF RM G P+++TY M++ F + VWK+M+E G P ++AL++
Sbjct: 418 AYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALIN 477
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDG 399
L + L+ A Y +EM KG+ +P +L + L + ++G
Sbjct: 478 GLCFENRLEEACVYFQEMLDKGI--RPPGQLFSNLKEALVEG 517
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 111/241 (46%), Gaps = 14/241 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
Y +I K + D + + H M+++ +P+ + ++ + ++EA+ F
Sbjct: 296 AYGMLISAFCKSGKCDEAIKVFHEMEES-GCMPSPHVYCMLINGLGSMERLDEALKYFQL 354
Query: 93 LDEFGLKDEVSYCN-LVDALC---EYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
E G EV CN ++ A C E+ H + + E + G T+ Y++I
Sbjct: 355 SKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVD----EMRKSGIG-----PNTRTYDII 405
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
L K + ++ M++ G +L++Y++ + + C + + A+K++K+MK+KG+
Sbjct: 406 LNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGV 465
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ ++ +I + ++ A ++EM + G +P + + + L E GR+ A
Sbjct: 466 LPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQE 525
Query: 269 V 269
V
Sbjct: 526 V 526
>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71060, mitochondrial-like [Cucumis sativus]
Length = 542
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 205/402 (50%), Gaps = 15/402 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E L +N AL FF W E F HTT++YN +I+ LGK +F++ WNL+ MK
Sbjct: 127 EVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRK- 185
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
I + TF ++ +RY A V EA+ +F K+++FG + VS N L+D LC+ ++V +A
Sbjct: 186 -GILSRETFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKA 244
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
QE+ F + K+ F + K Y ++L GW + K E + EM G D+ ++
Sbjct: 245 QEV-FDKMKHGRFKPDI-----KSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTF 298
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
I ++ CK+ K +A++L+ EM+ K IK + T+I +G + + A+ + +++
Sbjct: 299 GILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKL 358
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPRE 297
G P T N V+ C + ++ AY ++ EM K G P+ TY L K +E
Sbjct: 359 SGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKE 418
Query: 298 ILGLFDRMI-ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
+F RM E G P + TY +++R F + +W +M+ G P ++ L+
Sbjct: 419 AYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLI 478
Query: 357 DALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLD 398
++L + L+ A Y +EM G+ +P + + L Q LD
Sbjct: 479 NSLCHEHKLEDACTYFQEMLDVGI--RPPATMFSNLKQALLD 518
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 133/309 (43%), Gaps = 35/309 (11%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + + K+A E F+ ++ F +Y +++ G+ L N ++R + P
Sbjct: 236 CKSRNVKKAQEVFDKMKHG-RFKPDIKSYTILLEGWGQDQNL-LKLNEVYREMRDEGFEP 293
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELC 124
+ TF I+ + A +EA+ F++++ +K +C L++ L K + EA E
Sbjct: 294 DVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEF- 352
Query: 125 FGENKNVGFSG------------------------LVEMNKT------KIYNMILRGWFK 154
F + K GF+ + EM K+ + Y++IL K
Sbjct: 353 FEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIK 412
Query: 155 MSWWGKCREFWEEMDKR-GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
+ ++ M + G L +Y I + + C + A++++ EMK KG+ +
Sbjct: 413 GRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMH 472
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
++T+I ++ ++ A ++EM ++G +P + + + L ++GR A + ++
Sbjct: 473 LFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALLMAEKI 532
Query: 274 PKKGCVPDV 282
K P V
Sbjct: 533 XKLRKAPLV 541
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 191/372 (51%), Gaps = 12/372 (3%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A FF W + F H+ ++Y+ ++DILG +F L W+ + M++ F ++
Sbjct: 97 AHRFFLWAKRLPGFEHSKESYHILVDILGSSKQFPLIWDFLSDMRETRCCEICPEIFWLI 156
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVG 132
F+ Y A+L +A+ F+++ +FG+K V + L+ LC+ KHV +AQE F + NV
Sbjct: 157 FRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQE--FFDKVNVE 214
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
M K Y++++RGW + + R+ +EEM +RG D+ +Y+ ++ +CK G
Sbjct: 215 V-----MPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGN 269
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
+A KL++EM G+ D +Y+ IRA + A +V MR P+V T N
Sbjct: 270 VDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNC 329
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF--FRCLE-KPREILGLFDRMIESG 309
++K LC++ +V EAY +L EM ++G PD+ +Y+ F C + + L L RM +
Sbjct: 330 IVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKEN 389
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI-DKGMLDMA 368
P TY M+L+ R G V VW MEE G P Y +V KG L+ A
Sbjct: 390 CMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEA 449
Query: 369 RKYDEEMFAKGL 380
KY E M G+
Sbjct: 450 CKYFEMMIDDGI 461
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 88/197 (44%), Gaps = 4/197 (2%)
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
C++ P A++ + +M G+K V + ++ + + V A + ++ + P+
Sbjct: 161 CRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKV-NVEVMPNA 219
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDR 304
T + +++ + G EA + EM ++GC DV+ Y+ L K E LF
Sbjct: 220 KTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFRE 279
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
M +G+ P +Y + +R + + F V +M P+ F YN +V L
Sbjct: 280 MGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEK 339
Query: 365 LDMARKYDEEMFAKGLS 381
+D A + +EM +G+S
Sbjct: 340 VDEAYQLLDEMIERGVS 356
>gi|413952128|gb|AFW84777.1| hypothetical protein ZEAMMB73_772209 [Zea mays]
Length = 519
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 177/364 (48%), Gaps = 12/364 (3%)
Query: 35 NSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLD 94
+S++DIL K FD + L+ M+ ++ P A ++ +R+ A V A+ F L
Sbjct: 140 HSMLDILAKHRRFDAARALLDEMRRASTASP--AAVLLLVRRHCAARDVAGAVAAFRALP 197
Query: 95 EFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWF 153
FG + + L+ ALC YK+V +A+ L K F +TK +N++L GW
Sbjct: 198 SFGFHTGAAEFHGLLSALCRYKNVQDAENLLISWQKEFPF-------ETKSFNIVLNGWC 250
Query: 154 KMSWWGK-CREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
+ + + FW M+++G+ +D+ SY + K+G +KL+ M + G+ D
Sbjct: 251 NIVCSVREAKRFWSSMERKGIARDVLSYGSMISCFSKAGSLDSVMKLFNRMNEAGVAPDR 310
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
YN ++ A+ V A + R M E P T N++I LC+ + +EA +
Sbjct: 311 KVYNAIVFALAKGRCVKEAKMLVRSMEEKQVAPDTATFNSLIGPLCKARQFQEAMEMFDA 370
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
M ++ P V T+H E+ L D+M + P+MDTY+ML+RKF RW
Sbjct: 371 MLQRKLSPSVRTFHALLNVARNSTEVFDLLDKMKQLRCEPEMDTYIMLIRKFCRWREHES 430
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG-LSAKPREELGTK 391
V +W M G SPD AY L+ L G L+ A +Y EEM +KG L K EE+
Sbjct: 431 VEKLWSAMPANGLSPDRSAYIVLIHGLFLNGRLEEAARYYEEMKSKGFLPEKKTEEMVMA 490
Query: 392 LVQG 395
++G
Sbjct: 491 WLEG 494
>gi|125526112|gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
Length = 540
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 125/402 (31%), Positives = 201/402 (50%), Gaps = 13/402 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E L +N AL FF W E F ++ + ++++I+ LGK +F L W+L+ M+
Sbjct: 125 EVLKNLSNAGILALAFFRWAERQQGFRYSAEGFHNLIEALGKIKQFRLVWSLVEAMRCR- 183
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
S + TF+I+ +RY A V EA+ TF K+ FGLK ++S N L+D L + K V +A
Sbjct: 184 -SCLSKDTFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKA 242
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+ F E K G + K Y +++ GW + ++EM G+ D+ +Y
Sbjct: 243 HAI-FKEMKRKGRF----IPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAY 297
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ + CKSGK +A+K++ EM++ G Y +I +G E +D A++ ++ +E
Sbjct: 298 GMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSKE 357
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPRE 297
G V TCN VI C A+ ++ EM K G P+ TY L EK E
Sbjct: 358 SGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEE 417
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
LF RM G P+++TY M++ F + VWK+M+E G P ++AL++
Sbjct: 418 AYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALIN 477
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDG 399
L L+ A Y +EM KG+ +P +L + L + ++G
Sbjct: 478 GLCFDNRLEEACVYFQEMLDKGI--RPPGQLFSNLKEALVEG 517
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 111/241 (46%), Gaps = 14/241 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
Y +I K + D + + H M+++ +P+ + ++ + ++EA+ F
Sbjct: 296 AYGMLISAFCKSGKCDEAIKVFHEMEES-GCMPSPHVYCMLINGLGSMERLDEALKYFQL 354
Query: 93 LDEFGLKDEVSYCN-LVDALC---EYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
E G EV CN ++ A C E+ H + + E + G T+ Y++I
Sbjct: 355 SKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVD----EMRKSGIG-----PNTRTYDII 405
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
L K + ++ M++ G +L++Y++ + + C + + A+K++K+MK+KG+
Sbjct: 406 LNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGV 465
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ ++ +I + ++ A ++EM + G +P + + + L E GR+ A
Sbjct: 466 LPCMHMFSALINGLCFDNRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQE 525
Query: 269 V 269
V
Sbjct: 526 V 526
>gi|226505250|ref|NP_001147833.1| GTP binding protein [Zea mays]
gi|195614010|gb|ACG28835.1| GTP binding protein [Zea mays]
gi|413952711|gb|AFW85360.1| GTP binding protein [Zea mays]
Length = 547
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 200/401 (49%), Gaps = 13/401 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E L +N AL FF W E F++T + ++++I+ LGK +F L W+L+ M+
Sbjct: 132 EVLKNLSNAGMLALAFFRWAERQEGFSYTAEGFHNLIEALGKIKQFRLVWSLVETMRCR- 190
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
+ + TF+++ +RY A V EA+ TF K+ FGLK E+S N L+D L + K V +A
Sbjct: 191 -GLLSKDTFKLIVRRYARARKVKEAVETFEKMSIFGLKTELSDYNWLIDTLSKSKQVKKA 249
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
Q + + E K G + K Y +++ GW + ++EM G+ D+ +Y
Sbjct: 250 QAI-YKEMKRKGKF----VPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAY 304
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ + CKSGK +A+K++ EM+ G Y +I +G E +D A++ + ++
Sbjct: 305 GMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALKYFEHYKK 364
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPRE 297
G V TCN V+ C + + A+ ++ EM K P+ TY L +K E
Sbjct: 365 SGFPMEVPTCNAVVGAYCRASKFQHAFKMVDEMRKCKVGPNSRTYDVILHYLIKSQKFEE 424
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+F RM G P+++TY M++ F G + VWK+M E G P ++AL++
Sbjct: 425 AYNIFQRMGIDGCEPQLNTYTMMVGMFCSNGRVDMALKVWKQMGEKGVLPCMHMFSALIN 484
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPR--EELGTKLVQGG 396
L + L+ A Y +EM KG+ + L LVQGG
Sbjct: 485 GLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVQGG 525
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 106/244 (43%), Gaps = 20/244 (8%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
Y +I K + D + + + M+ + +P+ + ++ + ++EA+ F
Sbjct: 303 AYGMLISAFCKSGKCDEAIKVFYEMEAS-GCMPSPHVYCMLINGLGSEERLDEALKYFEH 361
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI------Y 145
+ G EV CN +V A C A F + EM K K+ Y
Sbjct: 362 YKKSGFPMEVPTCNAVVGAYCRASKFQHA------------FKMVDEMRKCKVGPNSRTY 409
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
++IL K + + ++ M G L++Y++ + + C +G+ A+K++K+M +
Sbjct: 410 DVILHYLIKSQKFEEAYNIFQRMGIDGCEPQLNTYTMMVGMFCSNGRVDMALKVWKQMGE 469
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
KG+ + ++ +I + ++ A ++EM + G +P + + + L + GR+
Sbjct: 470 KGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVQGGRISL 529
Query: 266 AYAV 269
A V
Sbjct: 530 AQEV 533
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 194/367 (52%), Gaps = 12/367 (3%)
Query: 13 RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
++L FFNW T F + + YN +ID+ GK FDL+W+LI MK I +TF +
Sbjct: 125 QSLAFFNWATTLEGFPSSPEPYNEMIDLAGKLRHFDLAWHLIDLMKSRGVRI-TVSTFSV 183
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNV 131
+ +RYV A L EA+ FN+++++G K D+VS+ ++ +LC+ + EA EL F K+
Sbjct: 184 LVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEA-ELFFDSLKHK 242
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
++ +Y ++ GW + K E + +M + GV ++++YSI +D +C+ G
Sbjct: 243 FEPDVI------VYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCG 296
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
+ +A ++ EM G + V +N+++R + + ++VY +M+ +GC ++ N
Sbjct: 297 QITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYN 356
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIES 308
+I+ C++ + EA VL M KKG P+ T++ F C+ + ++ G ++ +M E
Sbjct: 357 FLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKEL 416
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
P TY +L+R F + V + K+M+E P+ Y L+ +KG + A
Sbjct: 417 KCMPNTLTYNILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWNNA 476
Query: 369 RKYDEEM 375
+EM
Sbjct: 477 YNLMKEM 483
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 110/232 (47%), Gaps = 10/232 (4%)
Query: 159 GKCREF---WEEMD---KRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
GK R F W +D RGV + ++S+ + ++G +AV + M+ G K D
Sbjct: 154 GKLRHFDLAWHLIDLMKSRGVRITVSTFSVLVRRYVRAGLAAEAVHAFNRMEDYGCKPDK 213
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V+++ VI ++ A + ++ +P V+ +++ C G + +A V ++
Sbjct: 214 VSFSIVISSLCKKRRASEAELFFDSLKH-KFEPDVIVYTSLVHGWCRAGDIAKAEEVFSD 272
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M + G P+V TY L + +I +F MI++G P T+ L+R + G
Sbjct: 273 MKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGR 332
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
V V+ +M+ LGC+ D +YN L+++ LD A K + M KG++
Sbjct: 333 TEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVA 384
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 91/195 (46%), Gaps = 13/195 (6%)
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
W + L MK +G+++ V ++ ++R + A+ + M + GC+P V+ + V
Sbjct: 163 WHLIDL---MKSRGVRITVSTFSVLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIV 219
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITY----HCFFRC--LEKPREILGLFDRMIE 307
I LC+ R EA + K PDVI Y H + R + K E+ F M E
Sbjct: 220 ISSLCKKRRASEAELFFDSL-KHKFEPDVIVYTSLVHGWCRAGDIAKAEEV---FSDMKE 275
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
+G++P + TY +++ R G + V+ +M + GC P+ +N+L+ + G +
Sbjct: 276 AGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEK 335
Query: 368 ARKYDEEMFAKGLSA 382
+ +M G +A
Sbjct: 336 VLQVYNQMKRLGCAA 350
>gi|225431703|ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial [Vitis vinifera]
gi|296088528|emb|CBI37519.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 194/394 (49%), Gaps = 24/394 (6%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+TL N K AL FF W + H +H +YN +IDIL K +FD++W I M N
Sbjct: 88 QTLLRLRNVSKIALSFFLWAKDQAHHSHDVVSYNLIIDILAKVRQFDVAWQFIIEMDQN- 146
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS--YCNLVDALCEYKHVIE 119
S P TFRI+ +R V+A L +A+ F+ + F KD S +C L+D L +Y +V
Sbjct: 147 SLEPTSTTFRILIRRSVSAGLTRQAVRAFDDMSCFVEKDADSDDFCYLLDTLSKYGYVKL 206
Query: 120 AQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
A ++ F + K F K+Y +++ GW K++ EM +RG+ ++ +
Sbjct: 207 ASQI-FNQRK-FKFEA-----NAKMYTILIYGWCKINRVSIAERLLGEMVERGIEANVVT 259
Query: 180 YSIYMDIMCKSGKPWK----------AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVD 229
Y++ ++ +C+ A K+ EM++KGI+ DV +Y+ VI + +
Sbjct: 260 YNVLLNGICRRASLHPDDRFERTIRDAEKVLDEMRQKGIEPDVTSYSIVIHVYSRAHKPE 319
Query: 230 FAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF 289
+ R M++ G P+V T +V+K LC GR+ +A ++++M K G P TY+CFF
Sbjct: 320 LTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFF 379
Query: 290 ---RCLEKPREILGLFDRMIES-GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
R + L L+ +M E P M TY +L+ F + + V +W M+ G
Sbjct: 380 KEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIVQEIWDDMKTSGA 439
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
PD +Y L+ L +K A + EM KG
Sbjct: 440 GPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKG 473
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 86/212 (40%), Gaps = 42/212 (19%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
T TY SV+ L + + L+ M KD S P+ AT+ FK Y + A+
Sbjct: 336 TVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVS--PSAATYNCFFKEYRGRKDSDNALR 393
Query: 89 TFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
+ K+ E +S L +M+ YN++
Sbjct: 394 LYRKMKE------------------------------------EYSCLPDMH---TYNIL 414
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ + K++ +E W++M G DL SY++ + +C+ K +A + EM +KG
Sbjct: 415 VGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGY 474
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ + T+ R + S+ + R+ +++ E
Sbjct: 475 LPQKITFETLYRGLIQSDMLKTWRRLKKKLEE 506
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 85/202 (42%), Gaps = 8/202 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
P+ ++ I+ Y AH + + + G+ V +Y ++V LC + +A+EL
Sbjct: 300 PDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEEL 359
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM-DKRGVVKDLHSYSI 182
K+ G S YN + + + +M ++ + D+H+Y+I
Sbjct: 360 VSDMVKD-GVSP-----SAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNI 413
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ + K + +++ +MK G D+ +Y +I + + A + EM E G
Sbjct: 414 LVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKG 473
Query: 243 CQPSVVTCNTVIKLLCENGRVR 264
P +T T+ + L ++ ++
Sbjct: 474 YLPQKITFETLYRGLIQSDMLK 495
>gi|326524964|dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 565
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 202/402 (50%), Gaps = 13/402 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E L +N AL FF W E F +T D+++++I+ LGK +F L W+L+ M+
Sbjct: 150 EVLKNLSNAGILALAFFRWAERQQGFVYTADSFHNLIEALGKIKQFRLVWSLVEAMRCR- 208
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
+ + TFR++ +RY A V EA+ TF K+ FGLK ++S N L+D L + K V +A
Sbjct: 209 -GLLSKDTFRLIVRRYARARKVKEAVETFEKMAGFGLKADLSDYNWLIDVLSKSKQVKKA 267
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+ +N F + K Y +++ GW + ++EM G+ D+ +Y
Sbjct: 268 HAIFKEMKRNGRF-----VPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGLQPDVVAY 322
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ + CKSGK +A+K+++EM+ G Y +I +G E +D A++ + +
Sbjct: 323 GMLISSFCKSGKCDEAIKVFREMETNGCMPSPHVYCMLINGLGSEERLDEALKYFELSKA 382
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPRE 297
G V TCN V+ C + + + A+ ++ EM K G P+ TY L +K E
Sbjct: 383 SGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKSGIGPNSRTYDIILHHLIKSQKIEE 442
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+F M + G P+++TY M++ F + VW +M+E G P ++AL++
Sbjct: 443 AYNVFQGMSKDGCEPQLNTYTMMVGMFCSNERVDVALKVWNQMKEKGVLPCMHMFSALIN 502
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDG 399
L + L+ A Y +EM +G+ +P +L + L + ++G
Sbjct: 503 GLCFENRLEEACAYFQEMLDRGI--RPPGQLFSNLKEALIEG 542
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 104/242 (42%), Gaps = 22/242 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
Y +I K + D + + M+ N +P+ + ++ + ++EA+ F
Sbjct: 321 AYGMLISSFCKSGKCDEAIKVFREMETN-GCMPSPHVYCMLINGLGSEERLDEALKYFEL 379
Query: 93 LDEFGLKDEVSYCN-LVDALCE-------YKHVIEAQELCFGENKNVGFSGLVEMNKTKI 144
G EV CN +V A C +K V E ++ G N ++
Sbjct: 380 SKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKSGIGPN-------------SRT 426
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y++IL K + ++ M K G L++Y++ + + C + + A+K++ +MK
Sbjct: 427 YDIILHHLIKSQKIEEAYNVFQGMSKDGCEPQLNTYTMMVGMFCSNERVDVALKVWNQMK 486
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+KG+ + ++ +I + ++ A ++EM + G +P + + + L E GR+
Sbjct: 487 EKGVLPCMHMFSALINGLCFENRLEEACAYFQEMLDRGIRPPGQLFSNLKEALIEGGRIS 546
Query: 265 EA 266
A
Sbjct: 547 LA 548
>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/385 (29%), Positives = 190/385 (49%), Gaps = 18/385 (4%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+ L + N A FF W E H+ H+ +++VID L K ++ L W+++ MK
Sbjct: 27 DVLKKFENAGMVAYRFFEWAEKQRHYNHSVKAFHTVIDSLAKIRQYQLMWDVVKVMKS-- 84
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
+ N TF I+ ++Y A V EA+ TFN +D++ + ++ N L+ ALC+ K+V +A
Sbjct: 85 KRMVNVETFCIIMRKYARAQKVEEAVYTFNIMDKYDVPPNLAAFNGLLSALCKSKNVRKA 144
Query: 121 QELCFGENKNVGFSGLVE--MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
QE+ F + + + +K Y+++L GW K K RE + EM G D+
Sbjct: 145 QEI---------FDSIKDRFVPDSKTYSILLEGWGKDPNLPKAREIFREMVSNGCRPDIV 195
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+Y I +D++CK+G+ +A+ + EM K Y+ ++ G+ ++ A+ + EM
Sbjct: 196 TYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIENRIEDAVSTFLEM 255
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKP 295
G +P V N +I C+ R++ Y VL EM KG P+ T++ L +
Sbjct: 256 ENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNIILSSLIGRGET 315
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
E +F RMI+ P DTY M+++ F L+ VWK M+ P + L
Sbjct: 316 DEAYRVFLRMIKV-CEPDADTYTMMIKMFCERDELKKALKVWKYMKLKRFMPSMHTFQVL 374
Query: 356 VDALIDKGMLDMARKYDEEMFAKGL 380
++ L +KG + A EEM KG+
Sbjct: 375 INGLCEKGDVTQACVLLEEMIEKGI 399
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 126/280 (45%), Gaps = 9/280 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + + ++A E F+ ++ F + TY+ +++ GK + + M N P
Sbjct: 136 CKSKNVRKAQEIFDSIKD--RFVPDSKTYSILLEGWGKDPNLPKAREIFREMVSNGCR-P 192
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCF 125
+ T+ IM A V+EA+G N++D K +++ ++ IE F
Sbjct: 193 DIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIENRIEDAVSTF 252
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
E +N G V +YN ++ + K + EMD +GV + +++I +
Sbjct: 253 LEMENNGIEPDV-----AVYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNIILS 307
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
+ G+ +A +++ M K + D Y +I+ + + A++V++ M+ P
Sbjct: 308 SLIGRGETDEAYRVFLRMIKV-CEPDADTYTMMIKMFCERDELKKALKVWKYMKLKRFMP 366
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
S+ T +I LCE G V +A +L EM +KG P +T+
Sbjct: 367 SMHTFQVLINGLCEKGDVTQACVLLEEMIEKGIRPSGVTF 406
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 4/213 (1%)
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
++ ++ I M ++ K +AV + M K + ++ A+N ++ A+ S+ V A ++
Sbjct: 89 NVETFCIIMRKYARAQKVEEAVYTFNIMDKYDVPPNLAAFNGLLSALCKSKNVRKAQEIF 148
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP 295
+++ P T + +++ ++ + +A + EM GC PD++TY L K
Sbjct: 149 DSIKDRFV-PDSKTYSILLEGWGKDPNLPKAREIFREMVSNGCRPDIVTYGIMVDVLCKA 207
Query: 296 ---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
E LG+ + M + +P Y +L+ +G + + +ME G PD Y
Sbjct: 208 GRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIENRIEDAVSTFLEMENNGIEPDVAVY 267
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
NAL+ A L + EM KG++ R
Sbjct: 268 NALIGAFCKANRLKNVYRVLNEMDCKGVTPNSR 300
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 107/237 (45%), Gaps = 21/237 (8%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY ++D+L K D + +++ M D+ P + ++ Y + + +A+ TF +
Sbjct: 196 TYGIMVDVLCKAGRVDEALGIVNEM-DSTVCKPTPFIYSVLVHTYGIENRIEDAVSTFLE 254
Query: 93 LDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN------KTKIY 145
++ G++ +V+ Y L+ A C+ + KNV + L EM+ ++ +
Sbjct: 255 MENNGIEPDVAVYNALIGAFCKANRL-----------KNV-YRVLNEMDCKGVTPNSRTF 302
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N+IL + + M K D +Y++ + + C+ + KA+K++K MK
Sbjct: 303 NIILSSLIGRGETDEAYRVFLRMIK-VCEPDADTYTMMIKMFCERDELKKALKVWKYMKL 361
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
K + + +I + V A + EM E G +PS VT + +LL + GR
Sbjct: 362 KRFMPSMHTFQVLINGLCEKGDVTQACVLLEEMIEKGIRPSGVTFGRLRQLLIKEGR 418
>gi|147767583|emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]
Length = 525
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/394 (30%), Positives = 193/394 (48%), Gaps = 24/394 (6%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+TL N K AL FF W + H +H +YN +IDIL K +FD++W I M N
Sbjct: 88 QTLLRLRNVSKIALSFFLWAKDQAHHSHDVVSYNLIIDILAKVRQFDVAWQFIIEMDQN- 146
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS--YCNLVDALCEYKHVIE 119
S P TFRI+ +R V+A L +A+ F+ + F KD S +C L+D L +Y +V
Sbjct: 147 SLEPTSTTFRILIRRSVSAGLTRQAVRAFDDMSCFVEKDADSDDFCYLLDTLSKYGYVKL 206
Query: 120 AQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
A ++ F + K F K+Y +++ GW K++ EM +RG+ ++ +
Sbjct: 207 ASQI-FNQRK-FKFEA-----NAKMYTILIYGWCKINRVSIAERLLGEMVERGJXANVVT 259
Query: 180 YSIYMDIMCKSGKPWK----------AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVD 229
Y++ ++ +C+ A K+ EM++ GI+ DV +Y+ VI + +
Sbjct: 260 YNVLLNGICRXASLHPDDRFERTIRDAEKVLDEMRQXGIEPDVTSYSIVIHVYSRAHKPE 319
Query: 230 FAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF 289
+ R M++ G P+V T +V+K LC GR+ +A ++++M K G P TY+CFF
Sbjct: 320 LTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFF 379
Query: 290 ---RCLEKPREILGLFDRMIES-GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
R + L L+ +M E P M TY +L+ F + + V +W M+ G
Sbjct: 380 KEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIVQEIWDDMKTSGA 439
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
PD +Y L+ L +K A + EM KG
Sbjct: 440 GPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKG 473
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 86/212 (40%), Gaps = 42/212 (19%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
T TY SV+ L + + L+ M KD S P+ AT+ FK Y + A+
Sbjct: 336 TVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVS--PSAATYNCFFKEYRGRKDSDNALR 393
Query: 89 TFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
+ K+ E +S L +M+ YN++
Sbjct: 394 LYRKMKE------------------------------------EYSCLPDMH---TYNIL 414
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ + K++ +E W++M G DL SY++ + +C+ K +A + EM +KG
Sbjct: 415 VGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGY 474
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ + T+ R + S+ + R+ +++ E
Sbjct: 475 LPQKITFETLYRGLIQSDMLKTWRRLKKKLEE 506
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 85/202 (42%), Gaps = 8/202 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
P+ ++ I+ Y AH + + + G+ V +Y ++V LC + +A+EL
Sbjct: 300 PDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEEL 359
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM-DKRGVVKDLHSYSI 182
K+ G S YN + + + +M ++ + D+H+Y+I
Sbjct: 360 VSDMVKD-GVSP-----SAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNI 413
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ + K + +++ +MK G D+ +Y +I + + A + EM E G
Sbjct: 414 LVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKG 473
Query: 243 CQPSVVTCNTVIKLLCENGRVR 264
P +T T+ + L ++ ++
Sbjct: 474 YLPQKITFETLYRGLIQSDMLK 495
>gi|242092396|ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
gi|241914911|gb|EER88055.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
Length = 551
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 203/402 (50%), Gaps = 13/402 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E L +N AL FF W E F++T + ++++I+ LGK +F L W+L+ M+
Sbjct: 136 EVLKNLSNAGMLALAFFRWAERQEGFSYTAEGFHNLIEALGKIKQFKLVWSLVETMRCR- 194
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
+ + TF+++ +RY A V EA+ TF K+ FGLK E+S N L+D L + K V +A
Sbjct: 195 -GLLSKDTFKLIVRRYARARKVKEAVETFEKMSIFGLKTELSDYNWLIDTLSKSKQVKKA 253
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
Q + + E K G + K Y +++ GW + ++EM G+ D+ +Y
Sbjct: 254 QAI-YKEMKRKGKF----VPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAY 308
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ + CKSGK +A+K++ EM+ G Y +I +G E +D A++ + + ++
Sbjct: 309 GMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALKYFEQYKK 368
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPRE 297
G V TCN V+ C + A+ ++ EM + P+ TY L +K E
Sbjct: 369 SGFPMEVPTCNAVVGAYCRASKFEHAFKMVDEMRECKIGPNSRTYDVILHYLIKSQKFEE 428
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+F RM G P+++TY M++ F G + VWK+M E G P ++AL++
Sbjct: 429 AYNVFQRMGMDGCEPQLNTYTMMVGMFCSNGRVDMALNVWKQMGERGVLPCMHMFSALIN 488
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDG 399
L + L+ A Y +EM KG+ +P +L + L + ++G
Sbjct: 489 GLCFENRLEEACVYFQEMLDKGI--RPPGQLFSNLKEALVEG 528
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 111/249 (44%), Gaps = 22/249 (8%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
Y +I K + D + + + M+ + +P+ + ++ + ++EA+ F +
Sbjct: 307 AYGMLISAFCKSGKCDEAIKVFYEMEAS-GCMPSPHVYCMLINGLGSEERLDEALKYFEQ 365
Query: 93 LDEFGLKDEVSYCN-LVDALCE-------YKHVIEAQELCFGENKNVGFSGLVEMNKTKI 144
+ G EV CN +V A C +K V E +E G N ++
Sbjct: 366 YKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDEMRECKIGPN-------------SRT 412
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y++IL K + + ++ M G L++Y++ + + C +G+ A+ ++K+M
Sbjct: 413 YDVILHYLIKSQKFEEAYNVFQRMGMDGCEPQLNTYTMMVGMFCSNGRVDMALNVWKQMG 472
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
++G+ + ++ +I + ++ A ++EM + G +P + + + L E GR+
Sbjct: 473 ERGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRIS 532
Query: 265 EAYAVLAEM 273
A + +++
Sbjct: 533 LAQEMASKL 541
>gi|224111544|ref|XP_002315895.1| predicted protein [Populus trichocarpa]
gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 195/401 (48%), Gaps = 14/401 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E L +N AL FF W E F ++T++Y+++I+ LGK +F++ WNL+ MK
Sbjct: 10 EALKKLSNAGALALSFFRWAEKQKGFQYSTESYHALIESLGKIKQFNVIWNLVTDMKQK- 68
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
+ N TF ++ +RY A V EA+ F K+++FGLK E S N L+D LC+ + V A
Sbjct: 69 -GLLNKETFALISRRYARARKVKEAVDAFMKMEKFGLKIESSDVNRLLDTLCKSRQVERA 127
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
Q L F + GF + K Y ++L GW + + E + EM G D+ +Y
Sbjct: 128 Q-LVFDKMNKRGFVADI-----KSYTILLEGWGQEKNLSRLMEVYNEMKDEGFEPDVVTY 181
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
I ++ CKS + A++L+ EM+ K K Y T+I +G + + A+ + +
Sbjct: 182 GILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGLGAEKRLSEALEFFELSKA 241
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPRE 297
G P T N V+ C + R+ + + EM K G P TY L K +
Sbjct: 242 SGFVPEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSARTYDIILHHLIRAGKTKI 301
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+F +M G +P + TY +++R F + VW +M+ G P ++ L++
Sbjct: 302 AYSVFQKMSCEGCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKGILPVMHMFSTLIN 361
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLD 398
+L + LD A Y +EM G+ +P +L + L Q LD
Sbjct: 362 SLCHESKLDEACMYFQEMLDVGI--RPPAQLFSNLKQNLLD 400
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/228 (19%), Positives = 95/228 (41%), Gaps = 30/228 (13%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQEL 123
P+ T+ I+ + + ++A+ F++++ K YC L++ L K + EA E
Sbjct: 176 PDVVTYGILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGLGAEKRLSEALEF 235
Query: 124 -----------------------CFGENKNVGFSGLVEMNK------TKIYNMILRGWFK 154
C+ E + + EM K + Y++IL +
Sbjct: 236 FELSKASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSARTYDIILHHLIR 295
Query: 155 MSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVA 214
+++M G + +Y I + + C + A+K++ +MK KGI +
Sbjct: 296 AGKTKIAYSVFQKMSCEGCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKGILPVMHM 355
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
++T+I ++ +D A ++EM ++G +P + + + L + G+
Sbjct: 356 FSTLINSLCHESKLDEACMYFQEMLDVGIRPPAQLFSNLKQNLLDEGK 403
>gi|15219049|ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g52640, mitochondrial; Flags: Precursor
gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis thaliana]
gi|62320530|dbj|BAD95108.1| hypothetical protein [Arabidopsis thaliana]
gi|332194712|gb|AEE32833.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 126/393 (32%), Positives = 202/393 (51%), Gaps = 19/393 (4%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A FF W F H+ ++Y+ +++ILG +F L W+ + ++ + F I+
Sbjct: 85 AHRFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIV 144
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVG 132
F+ Y A+L +EA FN++ EFG+K V + L+ +LC+ KHV AQE FG+ K G
Sbjct: 145 FRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEF-FGKAK--G 201
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
F G+V KT Y++++RGW ++ R+ ++EM +R V DL +Y+ +D +CKSG
Sbjct: 202 F-GIVPSAKT--YSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGD 258
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
K+++EM G+K D ++ I A + V A +V M+ P+V T N
Sbjct: 259 VDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNH 318
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPD------VITYHCFFRCLEKPREILGLFDRMI 306
+IK LC+N +V +AY +L EM +KG PD ++ YHC + + ++L DR
Sbjct: 319 IIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDR-- 376
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI-DKGML 365
+ P TY M+L+ R G +W+ M E P Y ++ L+ KG L
Sbjct: 377 -TKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKL 435
Query: 366 DMARKYDEEMFAKGLS--AKPREELGTKLVQGG 396
+ A +Y E M +G+ + E L +LV G
Sbjct: 436 EEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWG 468
>gi|225424178|ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial [Vitis vinifera]
Length = 531
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 125/406 (30%), Positives = 201/406 (49%), Gaps = 16/406 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E L +N AL FF W E F ++T+ YN++I+ LGK +F + WNL++ M+
Sbjct: 116 EVLKKLSNSGVIALSFFRWAEKQKGFKYSTENYNALIEALGKIKQFKMIWNLVNDMRSK- 174
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
+ TF ++ +RY A V EA+ TF K+++FGL+ +S N L+DALC+ +HV A
Sbjct: 175 -GLLTQETFALISRRYARARKVKEAVETFEKMEKFGLQPVLSDFNRLLDALCKSRHVERA 233
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
QE+ F + K+ F + K Y ++L GW + + E + EM G D +Y
Sbjct: 234 QEV-FDKMKDRKFRPDI-----KSYTILLEGWGQEQNLLRLDEVYREMKDEGFEPDAVTY 287
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
I ++ CK+ + AV+L+ +M+ Y T+I +G + A++ + +
Sbjct: 288 GILINAHCKARRYDAAVELFHKMEANKCMPTPHIYCTLINGLGSERRLTEALQFFERSKA 347
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---E 297
G P T N V+ C++ R+ +AY ++ EM K G P TY L K R E
Sbjct: 348 SGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVGPQTRTYDIILHHLIKARRTKE 407
Query: 298 ILGLFDRM-IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
+F M E G P + TY +++R F + VW +M+ G P ++ L+
Sbjct: 408 AYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEERVDMALRVWDEMKAKGVLPGMHMFSTLI 467
Query: 357 DALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLD-GEQ 401
++L + LD A KY EM G+ +P + + L Q LD G+Q
Sbjct: 468 NSLCYENKLDEACKYFHEMLDMGI--RPPAAMFSNLKQTLLDEGKQ 511
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 111/253 (43%), Gaps = 10/253 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +I+ K +D + L H+M+ N +P + + + + EA+ F +
Sbjct: 286 TYGILINAHCKARRYDAAVELFHKMEAN-KCMPTPHIYCTLINGLGSERRLTEALQFFER 344
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
G E +Y +V + C+ + +A + E + G +T+ Y++IL
Sbjct: 345 SKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIV-DEMRKCGVGP-----QTRTYDIILHH 398
Query: 152 WFKMSWWGKCREFWEEMDKR-GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
K + ++ M G + +Y I + + C + A++++ EMK KG+
Sbjct: 399 LIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEERVDMALRVWDEMKAKGVLP 458
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
+ ++T+I ++ +D A + + EM +MG +P + + + L + G+ ++ +L
Sbjct: 459 GMHMFSTLINSLCYENKLDEACKYFHEMLDMGIRPPAAMFSNLKQTLLDEGK-QDMVLIL 517
Query: 271 AEMPKKGCVPDVI 283
A+ K VI
Sbjct: 518 AQKLDKIRTTQVI 530
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/394 (28%), Positives = 201/394 (51%), Gaps = 20/394 (5%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A FF W + F H+ ++Y+ +++ILG +F + W+ + M+++ N ++
Sbjct: 95 AHRFFLWAKRIPGFEHSEESYHILVNILGTSRQFAILWDFLIEMRESHDFEINQEIIWLV 154
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVG 132
F+ Y A+L ++A+ F+++ EFGL+ V + L+ LC+ KHV AQ+ F +
Sbjct: 155 FRSYSRANLPSDAIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQ--FFDRVKHK 212
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
F K K Y++++RGW + + R+ ++EM RG D+ +Y+ ++ +CK G
Sbjct: 213 FEA-----KAKTYSILVRGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGN 267
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
+A K+++E+ G++ D +Y IRA + + V M+ P+V T N
Sbjct: 268 VDEAYKMFREIGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNC 327
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPD------VITYHCFFRCLEKPREILGLFDRMI 306
+IK LC+NG+V +AY +L EM ++G PD ++ YHC + + +++ + M+
Sbjct: 328 IIKKLCKNGKVEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISI---MV 384
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI-DKGML 365
+ P +Y MLL+ R G +W+ M E G P Y+ ++ L KG L
Sbjct: 385 KDNCLPDRHSYNMLLKLLVRVGRFDRATEIWESMGERGFYPSVSTYSVMIHGLCKKKGKL 444
Query: 366 DMARKYDEEMFAKGLS--AKPREELGTKLVQGGL 397
+ A +Y E M +G+ A E L +L+ GL
Sbjct: 445 EEACRYFETMIDEGIPPYASTIEMLRNRLIGFGL 478
>gi|242054767|ref|XP_002456529.1| hypothetical protein SORBIDRAFT_03g037920 [Sorghum bicolor]
gi|241928504|gb|EES01649.1| hypothetical protein SORBIDRAFT_03g037920 [Sorghum bicolor]
Length = 517
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/364 (31%), Positives = 180/364 (49%), Gaps = 12/364 (3%)
Query: 35 NSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLD 94
+S++ IL K FD + L+ M+ +S+ + A ++ +R+ A V A+ F L
Sbjct: 141 HSMLAILAKHRRFDAARALLDEMRR--ASMASPAAVLLLVRRHCAARDVAAAVAAFRALP 198
Query: 95 EFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWF 153
FG V+ + L+ ALC YK+V +A+ L K F +TK +N++L GW
Sbjct: 199 SFGFDTGVAEFHGLLSALCRYKNVQDAEHLLISCEKEFPF-------ETKSFNIVLNGWC 251
Query: 154 KM-SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
+ + + FW M+++G+ +D+ SY + K+G +KL+ M + G+ D
Sbjct: 252 NIVCSLREAKRFWSSMERKGIDRDVVSYGSMISCFSKAGSLHSVMKLFNHMNEAGVAPDR 311
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
YN ++ A+ V A + R M E P T N++I LC+ +V+EA +
Sbjct: 312 KVYNAIVFALAKGRCVKAAKMLVRTMEEKQVAPDTATFNSLIGPLCKARQVQEAMEMFDA 371
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
M ++G P V T+H E+ L D+M + P+MDTY+ML+RKF RW
Sbjct: 372 MLERGLSPSVRTFHALLNVARNSTEVFDLLDKMKQLQCEPEMDTYIMLIRKFCRWRQHES 431
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA-KPREELGTK 391
V +W M G SPD AY L+ L G L+ A KY EM +KG S K EE+ T
Sbjct: 432 VEKLWSAMPANGLSPDRSAYIVLIHGLFLNGRLEEAAKYYGEMKSKGFSPEKKTEEMITA 491
Query: 392 LVQG 395
++G
Sbjct: 492 WLEG 495
>gi|357450985|ref|XP_003595769.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484817|gb|AES66020.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 497
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 207/402 (51%), Gaps = 29/402 (7%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+ L + +DWK A FF WV ++T + + YN +I+ILGK F+ ++ M
Sbjct: 102 QVLQRHRSDWKPAFIFFKWVSKTNNYTPSCEVYNEIINILGKMKCFEELHQVLDEMSQRK 161
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV---SYCNLVDALCEYKHVI 118
I N TF I+ +R+V AH + EA+ F + +EFGL +E+ ++ L+ +C YKH+
Sbjct: 162 EFI-NEETFCILIRRFVAAHKLEEAINIFYRREEFGLDNELDSKAFRTLLMWMCRYKHIE 220
Query: 119 EAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
EA+ L F N N F ++ K +N+IL GW + + + W KD+
Sbjct: 221 EAETL-FHRNLN-KFRFCRDI---KTWNVILNGWCVLGNTHEAKRLW---------KDII 266
Query: 179 SYSIYMDIMCKS-GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
+Y CK G ++ V+ +++++ K DVV +N +I + + + A++V+ +
Sbjct: 267 AYK------CKEIGNCFEVVQW--DVEEESCKPDVVIFNCLIDGLCFKKRIPEALQVFHD 318
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG--CVPDVITYHCFFRCLEKP 295
M+E C P+V T N++IK L + R+ + Y ++ +M ++ C+P+ +TY + L+ P
Sbjct: 319 MKERDCLPNVATYNSLIKHLFKIRRMEKVYELVEDMERRSGDCLPNGVTYSYLLQSLKAP 378
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
E+ + +RM +G D ++LR + +W L + W +ME G PD +Y +
Sbjct: 379 EEVPAVLERMERNGCAMSDDICNLILRLYMKWDDLDGLRKTWDEMERNGLGPDRRSYTIM 438
Query: 356 VDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGL 397
+ + G A +Y +EM +KG+ +PR E + G L
Sbjct: 439 IHGHYENGRTKDAMRYFQEMTSKGIVLEPRTEKLVISMNGQL 480
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 193/386 (50%), Gaps = 12/386 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+ L ++NDW A FF W + + H+ ++YNS++DILGK +FDL W L+ M D
Sbjct: 124 QVLKRFSNDWIPAFGFFKWAKAQTGYRHSMNSYNSMVDILGKLKKFDLMWELVEEM-DRL 182
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA 120
+ AT + +R A +A+ F ++ FG+K D ++ L+DAL + V A
Sbjct: 183 GGYVSLATMTKVMRRLARASRWKDAIEAFRGMERFGVKKDTLAMNTLMDALVKENSVEHA 242
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
++ V F + +N +N+++ GW K + EM + G D+ SY
Sbjct: 243 NDVF------VEFKDSILLN-PHTFNVLIHGWCKARKMDNALKSMAEMKEHGFCPDVISY 295
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ ++ C+ K + EM++KG +VV Y V+ A+G + + A+ VY +M+
Sbjct: 296 TSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYTIVMHALGKGKEISKALEVYEKMKG 355
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPRE- 297
C P +++I +L + GR+++A V +M K+G +PDV+TY+ C+ E
Sbjct: 356 SSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQEED 415
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
L L +M ES +P ++TY LL+ R ++ + + M + S + Y+ LV
Sbjct: 416 ALKLLLKMEESSCKPDLNTYSPLLKMCCRNNRMKVLSALLNHMFKNDISLEVGTYSLLVH 475
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAK 383
L G L+ A + EEM +KGL K
Sbjct: 476 GLCKSGKLEHACLFFEEMVSKGLVPK 501
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 49/316 (15%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTY--NSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
A+ WK A+E F +E F DT N+++D L K + + ++ KD S +
Sbjct: 201 ASRWKDAIEAFRGME---RFGVKKDTLAMNTLMDALVKENSVEHANDVFVEFKD--SILL 255
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELC 124
N TF ++ + A ++ A+ + ++ E G D +SY ++V+A C K + +
Sbjct: 256 NPHTFNVLIHGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSV- 314
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
E + G V Y +++ K K E +E+M V D YS +
Sbjct: 315 LNEMEEKGCPPNV-----VTYTIVMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLI 369
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
I+ K+G+ A ++++M K+G DV+ YNT+I A + + A+++ +M E C+
Sbjct: 370 YILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKMEESSCK 429
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVL---------------------------------- 270
P + T + ++K+ C N R++ A+L
Sbjct: 430 PDLNTYSPLLKMCCRNNRMKVLSALLNHMFKNDISLEVGTYSLLVHGLCKSGKLEHACLF 489
Query: 271 -AEMPKKGCVPDVITY 285
EM KG VP T+
Sbjct: 490 FEEMVSKGLVPKDCTH 505
>gi|302142966|emb|CBI20261.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 175/390 (44%), Gaps = 47/390 (12%)
Query: 2 ETLSCYANDWKRALEFFNWVE---TDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMK 58
+ L + +DW+ A FFNW + ++ +N ++DILG+ F L M
Sbjct: 123 DVLKRHRSDWRPAYVFFNWASRCGIESGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMS 182
Query: 59 DNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVI 118
+ N TF ++ RY AH EA
Sbjct: 183 KRKGLV-NERTFGVLLNRYAAAHKTEEAAVKI---------------------------- 213
Query: 119 EAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
F + K + N+IL GW + + + FW ++ D
Sbjct: 214 ------FYKRKGAWIRSM---------NVILNGWCVLGSLREAKRFWNDIITSKCKPDKF 258
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+Y I+++ + K+GK AVKL++ M +KG DV N +I A+ + + A+ V REM
Sbjct: 259 TYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLREM 318
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI 298
E CQP V T N++IK LC+ R + Y +L +M +KGC+P+ TY + +KP E+
Sbjct: 319 NERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGYLLKSTKKPEEV 378
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
G+ +RM +G R D Y ++L+ + WG+ + +ME G PD+ Y ++
Sbjct: 379 PGILERMERNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEMERNGMGPDQRTYTIMIHG 438
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAKPREEL 388
L DKG +D A Y ++M G+ +PR L
Sbjct: 439 LYDKGRMDDALSYFKQMTLMGMVPEPRTTL 468
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 201/408 (49%), Gaps = 31/408 (7%)
Query: 13 RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
++L FFNW + F + + YN ++D+ GK +FDL+W++I MK I H TF
Sbjct: 160 QSLAFFNWSSSLDGFPASPEPYNEMLDLAGKLRQFDLAWHVIDLMKSRGVEITVH-TFSA 218
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNV 131
+ +RYV A L EA+ FN+++++G D V++ ++ +LC+ + EAQ F K+
Sbjct: 219 LVRRYVRAGLAAEAVHAFNRMEDYGCTPDMVAFSIVISSLCKKRRANEAQSF-FDSLKHR 277
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
+V +Y ++ GW + K E + +M G+ ++++YSI +D +C+ G
Sbjct: 278 FEPDVV------VYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCG 331
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
+ +A ++ EM G + V +N+++R + + ++VY +M+ +GC ++ N
Sbjct: 332 QITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYN 391
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIES 308
+I+ C + + EA +L M KKG P+ T++ F C+ K ++ G ++ RM E
Sbjct: 392 FIIESHCRDENLEEAAKILNLMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARMKEL 451
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID------- 361
+P TY +L+R F V + K+M+E P+ Y L+ D
Sbjct: 452 NCQPNTLTYNILMRMFAESRSTDMVLKMKKEMDESQVEPNVNTYRILISMFCDMKHWNNA 511
Query: 362 -KGMLDMARK---------YDE--EMFAKGLSAKPREELGTKLVQGGL 397
K M++M + Y+ E+ K K EEL K+V G
Sbjct: 512 YKLMMEMVEEKCLRPNLSVYETVLELLRKAGQLKKHEELVDKMVARGF 559
>gi|297853022|ref|XP_002894392.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340234|gb|EFH70651.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 201/393 (51%), Gaps = 19/393 (4%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A FF W + F H+ ++Y+ +++ILG +F L W+ + ++ F I+
Sbjct: 85 AHRFFLWAKRIPDFEHSLESYHILVEILGCSKQFALLWDFLIEAREYNYFEITSKVFWIV 144
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVG 132
F+ Y A+L +EA FN++ EFG+K V + L+ +LC+ KHV AQE +K G
Sbjct: 145 FRAYSRANLPSEASRAFNRMVEFGIKPCVDDLDQLLHSLCDRKHVNHAQEFF---DKAKG 201
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
F G+V KT Y++++RGW ++ R+ ++EM + V DL +Y+ +D +CKSG
Sbjct: 202 F-GIVPSAKT--YSILVRGWARIRDASGARKVFDEMLENNCVVDLLAYNALLDALCKSGD 258
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
A K+++EM G+K D ++ I + + V A +V M+ P+V T N
Sbjct: 259 VDGAYKMFQEMGNLGLKPDAYSFAIFIHSYCDASDVHSAYQVLDRMKRYDLVPNVYTFNH 318
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPD------VITYHCFFRCLEKPREILGLFDRMI 306
+IK LC+N +V +AY +L EM +KG PD ++ YHC + + ++L DR
Sbjct: 319 IIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDR-- 376
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI-DKGML 365
+ P TY M+L+ R G V +W+ M E P Y ++ L+ KG L
Sbjct: 377 -TKCLPDRHTYNMVLKLLIRIGRFDRVTEIWEGMSERKFYPTVATYTVMIHGLVRKKGKL 435
Query: 366 DMARKYDEEMFAKGLS--AKPREELGTKLVQGG 396
+ A +Y E M +G+ + E L +LV G
Sbjct: 436 EEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWG 468
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 188/370 (50%), Gaps = 13/370 (3%)
Query: 11 WKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
+ + L FFNW F H+ + Y +ID+ GK +FDL+W LI MK IP TF
Sbjct: 126 FPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVE-TF 184
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENK 129
I+ +RYV A L EA+ FN+++++G K D++++ ++ +L + + IEAQ F K
Sbjct: 185 TILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSF-FDSLK 243
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
+ +V +Y ++ GW + + + EM G+ ++++YSI +D +C+
Sbjct: 244 DRFEPDVV------VYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCR 297
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
SG+ +A ++ EM G + + +N ++R + + ++VY +M+ +GC P +T
Sbjct: 298 SGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAIT 357
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMI 306
N +I+ C + + EA +L + KKGC + +++ F C+ K ++ +F +M
Sbjct: 358 YNFLIESHCRDDNLEEAVKILNSV-KKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMK 416
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
+ RP TY +L+R F V + K+M+E P+ Y L+ G +
Sbjct: 417 DLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWN 476
Query: 367 MARKYDEEMF 376
A + +EM
Sbjct: 477 NAYSFFKEMI 486
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 206/409 (50%), Gaps = 32/409 (7%)
Query: 13 RALEFFNWVETDCHFTH-TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
++L FFNW + + H + YN +ID+ GK +FDL+W+LI MK I + TF
Sbjct: 132 QSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEI-SIETFT 190
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKN 130
I+ +RYV A L +EA+ FN+++++G + D++++ ++ L + EAQ F K+
Sbjct: 191 ILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSF-FDSLKD 249
Query: 131 VGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS 190
++ +Y ++RGW + + + ++EM G+ ++++YSI +D +C+
Sbjct: 250 RFEPDVI------VYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRC 303
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTC 250
G+ +A ++ +M G + + +N ++R + + ++VY +M+++GC+P +T
Sbjct: 304 GQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITY 363
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIE 307
N +I+ C + + A VL M KK C + T++ FR +EK R++ G ++ +M+E
Sbjct: 364 NFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMME 423
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
+ P TY +L+R F V + K+M++ P+ Y LV G +
Sbjct: 424 AKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNN 483
Query: 368 ARKYDEEM-----FAKGLS--------------AKPREELGTKLVQGGL 397
A K +EM LS K EEL K++Q GL
Sbjct: 484 AYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 188/370 (50%), Gaps = 13/370 (3%)
Query: 11 WKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
+ + L FFNW F H+ + Y +ID+ GK +FDL+W LI MK IP TF
Sbjct: 1158 FPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVE-TF 1216
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENK 129
I+ +RYV A L EA+ FN+++++G K D++++ ++ +L + + IEAQ F K
Sbjct: 1217 TILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSF-FDSLK 1275
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
+ +V +Y ++ GW + + + EM G+ ++++YSI +D +C+
Sbjct: 1276 DRFEPDVV------VYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDALCR 1329
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
SG+ +A ++ EM G + + +N ++R + + ++VY +M+ +GC P +T
Sbjct: 1330 SGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAIT 1389
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMI 306
N +I+ C + + EA +L + KKGC + +++ F C+ K ++ +F +M
Sbjct: 1390 YNFLIESHCRDDNLEEAVKILNSV-KKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMK 1448
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
+ RP TY +L+R F V + K+M+E P+ Y L+ G +
Sbjct: 1449 DLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWN 1508
Query: 367 MARKYDEEMF 376
A + +EM
Sbjct: 1509 NAYSFFKEMI 1518
>gi|296085437|emb|CBI29169.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 121/211 (57%), Gaps = 52/211 (24%)
Query: 1 RETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDN 60
R+TLSCYANDWKRALEFF+WV+T C F HTTDTYN +IDILGKFFEFDL W
Sbjct: 58 RQTLSCYANDWKRALEFFDWVQTQCGFNHTTDTYNGMIDILGKFFEFDLIW--------- 108
Query: 61 PSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEA 120
EF L+DE SY NL+DALCEYKHVIEA
Sbjct: 109 ----------------------------------EFNLRDETSYSNLIDALCEYKHVIEA 134
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCRE---FWEEMDKRGVVKDL 177
+EL E+K++ F+ + KIYN+ILRGWFKM WG R W++M+++G D
Sbjct: 135 EELFLKESKDLVFN-----DDVKIYNIILRGWFKMG-WGFLRPVFIVWKKMEEQGCSPDA 188
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+Y+ +D + + G A K +EM KG+
Sbjct: 189 CAYNALIDALVQKGMVDLARKYEEEMLAKGL 219
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/77 (71%), Positives = 66/77 (85%), Gaps = 2/77 (2%)
Query: 317 YVMLLRKFGR--WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
Y ++LR + + WGFLRPVF+VWKKMEE GCSPD AYNAL+DAL+ KGM+D+ARKY+EE
Sbjct: 154 YNIILRGWFKMGWGFLRPVFIVWKKMEEQGCSPDACAYNALIDALVQKGMVDLARKYEEE 213
Query: 375 MFAKGLSAKPREELGTK 391
M AKGLSAKPR +LGTK
Sbjct: 214 MLAKGLSAKPRVDLGTK 230
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 5/108 (4%)
Query: 174 VKDLHSYSIYMDIMCKSGKPWKAVKLY-KEMKKKGIKMDVVAYNTVIRAVGVSEGVDF-- 230
++D SYS +D +C+ +A +L+ KE K DV YN ++R G F
Sbjct: 112 LRDETSYSNLIDALCEYKHVIEAEELFLKESKDLVFNDDVKIYNIILRG-WFKMGWGFLR 170
Query: 231 -AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
V+++M E GC P N +I L + G V A EM KG
Sbjct: 171 PVFIVWKKMEEQGCSPDACAYNALIDALVQKGMVDLARKYEEEMLAKG 218
>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 537
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 205/409 (50%), Gaps = 32/409 (7%)
Query: 13 RALEFFNWVET-DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
++L FFNW + D + + YN +ID+ GK +FDL+W+LI MK I + TF
Sbjct: 132 QSLAFFNWATSRDDYDQKSPHPYNEMIDLAGKVRQFDLAWHLIDLMKSRNVEI-SIETFT 190
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKN 130
I+ +RYV A L +EA+ FN+++++G + D++++ ++ L + EAQ F K+
Sbjct: 191 ILIRRYVRAGLASEAVHCFNRMEDYGCVPDQIAFSIVISNLSRKRRASEAQSF-FDSLKD 249
Query: 131 VGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS 190
++ +Y ++RGW + + + +++M G+ ++++YSI +D +C+
Sbjct: 250 RFEPDVI------VYTNLVRGWCRAGEISEAEKVFKDMKLAGIEPNVYTYSIVIDALCRC 303
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTC 250
G+ +A ++ +M G + + +N ++R + + ++VY +M+++GC+P +T
Sbjct: 304 GQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQMKKLGCEPDTITY 363
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIE 307
N +I+ C + + A VL M KK C + T++ FR +EK R++ G ++ +M+E
Sbjct: 364 NFLIETHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMME 423
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
+ P TY +L+R F V + K M++ P+ Y LV G +
Sbjct: 424 AKCEPNTVTYNILMRMFAGSKSTDMVLKMKKDMDDKEVEPNVNTYRLLVTMFCGMGHWNN 483
Query: 368 ARKYDEEM-----FAKGLS--------------AKPREELGTKLVQGGL 397
A K +EM LS K EEL K++Q GL
Sbjct: 484 AYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
>gi|227463004|gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463006|gb|ACP39955.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 547
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 196/402 (48%), Gaps = 15/402 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E L +N AL FF W E F + T++YN++I+ LGK +F L +L++ MK
Sbjct: 128 EVLKRLSNAGVIALSFFTWAEKQKGFKYNTESYNALIEALGKIKQFKLIRSLVNEMKSR- 186
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
+ N TF ++ +R+ A V EA+ F +++EFG K E S N L+D LC+ +HV +A
Sbjct: 187 -KLLNKDTFALISRRHARARKVEEAIEAFERMEEFGFKLETSDFNRLLDTLCKSRHVEKA 245
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
++ F + K F + K Y ++L GW K + E + EM G D+ +Y
Sbjct: 246 NKV-FDKMKKRRF-----VPDIKSYTILLEGWGKEHNLLRLDEVYLEMKYDGFEPDVVTY 299
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
I + CK+ K A++L+ EM+ K K Y T+I +G + + A+ + +
Sbjct: 300 GILISAYCKAKKYDAAIELFHEMEAKNCKPTPHVYCTLINGLGSEKRLSEALEFFERFKS 359
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---E 297
G P T N+++ C + R+ +A+ V+ EM K P+ TY L K R E
Sbjct: 360 CGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRKHSAGPNSRTYDIILHHLIKARRTNE 419
Query: 298 ILGLFDRMI-ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
F +M E G P + TY +++R F + VW +M+ G P Y+ L+
Sbjct: 420 AYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDRVDLAKQVWDQMKAKGVLPGMHMYSDLI 479
Query: 357 DALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLD 398
+L K L A KY +EM G+ +P ++ + L Q LD
Sbjct: 480 TSLCHKNKLGEACKYFQEMLDAGI--RPPAKMFSNLKQALLD 519
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 98/236 (41%), Gaps = 43/236 (18%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
ALEFF ++ C FT TYNS++ D ++ +I M+ + S+ PN T+ I+
Sbjct: 350 ALEFFERFKS-CGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRKH-SAGPNSRTYDII 407
Query: 74 FKRYVTAHLVNEAMGTFNKL-DEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
+ A NEA F K+ +E G + VS
Sbjct: 408 LHHLIKARRTNEAYFRFQKMSNEPGCEPTVS----------------------------- 438
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
Y +I+R + ++ W++M +GV+ +H YS + +C K
Sbjct: 439 -----------TYEIIVRMFCNEDRVDLAKQVWDQMKAKGVLPGMHMYSDLITSLCHKNK 487
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
+A K ++EM GI+ ++ + +A+ D A+ + R++ ++ P VV
Sbjct: 488 LGEACKYFQEMLDAGIRPPAKMFSNLKQALLDEGKNDEALNLARKINKLRGTPLVV 543
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 49/250 (19%), Positives = 104/250 (41%), Gaps = 31/250 (12%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQEL 123
P+ T+ I+ Y A + A+ F++++ K YC L++ L K + EA E
Sbjct: 294 PDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTPHVYCTLINGLGSEKRLSEALEF 353
Query: 124 -----------------------CFGENKNVGFSGLVEMNK------TKIYNMILRGWFK 154
C+ + F + EM K ++ Y++IL K
Sbjct: 354 FERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRKHSAGPNSRTYDIILHHLIK 413
Query: 155 MSWWGKCREFWEEM-DKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
+ +++M ++ G + +Y I + + C + A +++ +MK KG+ +
Sbjct: 414 ARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDRVDLAKQVWDQMKAKGVLPGMH 473
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
Y+ +I ++ + A + ++EM + G +P + + + L + G+ EA + ++
Sbjct: 474 MYSDLITSLCHKNKLGEACKYFQEMLDAGIRPPAKMFSNLKQALLDEGKNDEALNLARKI 533
Query: 274 PKKGCVPDVI 283
K P V+
Sbjct: 534 NKLRGTPLVV 543
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 197/394 (50%), Gaps = 20/394 (5%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A FF W + F H+ ++Y+ ++DILG +F L W+ + ++++ + F ++
Sbjct: 91 AQRFFLWAKRIPGFDHSKESYHILVDILGSSKQFALLWDFLIEIRESQDFEISPQVFWLV 150
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVG 132
F+ Y A+L ++A+ F+++ EFGLK + + L+ LC+ KH AQ++ F K+
Sbjct: 151 FRAYSRANLPSDAIRAFDRMVEFGLKPTIDDLDQLLYVLCKRKHAKHAQQI-FDRVKHQF 209
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
+ K Y++++RGW + + ++EM ++ D+ +Y+ ++ CK GK
Sbjct: 210 ------QTRAKTYSILVRGWGDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGK 263
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
+A K+++EM GIK D ++ IRA + + A RV EM+ P+V T N
Sbjct: 264 VSEAYKMFREMGSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNC 323
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPD------VITYHCFFRCLEKPREILGLFDRMI 306
+IK LC+ +V EAY +L E+ ++ PD ++ YHC + L RM+
Sbjct: 324 MIKKLCKKEKVEEAYQLLNEIIERSGQPDAWSYNAILAYHCEHSEVNSATR---LISRMV 380
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI-DKGML 365
+ P +Y MLL+ R G VW+ M E G P Y+ +V L KG L
Sbjct: 381 KDNCLPDKHSYNMLLKLLIRVGRFDRAIEVWESMGEKGFYPSVSTYSVMVHGLCKKKGKL 440
Query: 366 DMARKYDEEMFAKGLS--AKPREELGTKLVQGGL 397
+ A KY E M +G+ + E L +L+ GL
Sbjct: 441 EEACKYFEMMIDEGIPPYSSTVEILRNRLIGLGL 474
>gi|449463418|ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
gi|449499065|ref|XP_004160711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 439
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 189/382 (49%), Gaps = 14/382 (3%)
Query: 3 TLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPS 62
L + N A FF W ++ H+ Y+S+I+ L K ++ + W+L++ M++
Sbjct: 28 VLRRFENAGMLAYRFFEWASKQRNYVHSVRAYHSMIESLAKIRQYQMVWDLVNAMRN--K 85
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQ 121
I N F I+ ++Y A V EA+ TFN ++++ +K V+ N L+ ALC+ K+V +AQ
Sbjct: 86 EILNVEAFCIIMRKYARAQKVEEAVYTFNVMEKYNMKPNVAAFNGLLSALCKSKNVRKAQ 145
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
E+ +N F + +K Y++++ GW + K RE + EM G + D +YS
Sbjct: 146 EIF--DNMKDQF-----VPDSKTYSILIEGWGRAPNLPKAREIYREMIDSGCIPDEVTYS 198
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
I +D++CK+G+ +AV++ KEM K Y+ ++ GV ++ A+ + EM
Sbjct: 199 IMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYSVLVHTYGVENRIEDAVSTFLEMERN 258
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREI 298
G V N +I C+ +++ Y VL +M KG P+ T + L + E
Sbjct: 259 GVMADVAAYNALISAFCKANKMKNVYRVLKDMDLKGVNPNSRTCNIIINSLIGRGETDEA 318
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+F RMI+ P +D+Y M+++ F L +WK M++ P ++ L++
Sbjct: 319 FKIFRRMIKV-CEPDVDSYTMIIKMFCGRKELDMALKIWKYMKKKQFVPSMHTFSVLING 377
Query: 359 LIDKGMLDMARKYDEEMFAKGL 380
L G A EEM KG+
Sbjct: 378 LCQIGNATQACVLLEEMIEKGI 399
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 110/250 (44%), Gaps = 5/250 (2%)
Query: 139 MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK 198
++ + Y+ ++ K+ + + M + ++ ++ ++ I M ++ K +AV
Sbjct: 53 VHSVRAYHSMIESLAKIRQYQMVWDLVNAMRNKEIL-NVEAFCIIMRKYARAQKVEEAVY 111
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
+ M+K +K +V A+N ++ A+ S+ V A ++ M++ P T + +I+
Sbjct: 112 TFNVMEKYNMKPNVAAFNGLLSALCKSKNVRKAQEIFDNMKDQFV-PDSKTYSILIEGWG 170
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMD 315
+ +A + EM GC+PD +TY L K E + + M + +P
Sbjct: 171 RAPNLPKAREIYREMIDSGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSF 230
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
Y +L+ +G + + +ME G D AYNAL+ A + + ++M
Sbjct: 231 IYSVLVHTYGVENRIEDAVSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDM 290
Query: 376 FAKGLSAKPR 385
KG++ R
Sbjct: 291 DLKGVNPNSR 300
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 102/231 (44%), Gaps = 9/231 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+ ++D+L K D + ++ M N P+ + ++ Y + + +A+ TF +
Sbjct: 196 TYSIMVDVLCKAGRVDEAVEIVKEMDYNNCK-PSSFIYSVLVHTYGVENRIEDAVSTFLE 254
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
++ G + D +Y L+ A C+ + + K++ G+ ++T N+I+
Sbjct: 255 MERNGVMADVAAYNALISAFCKANKMKNVYRVL----KDMDLKGVNPNSRT--CNIIINS 308
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + + M K D+ SY++ + + C + A+K++K MKKK
Sbjct: 309 LIGRGETDEAFKIFRRMIK-VCEPDVDSYTMIIKMFCGRKELDMALKIWKYMKKKQFVPS 367
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
+ ++ +I + A + EM E G +PS T + LL + GR
Sbjct: 368 MHTFSVLINGLCQIGNATQACVLLEEMIEKGIRPSGATFGRLRHLLIKEGR 418
>gi|293332689|ref|NP_001168961.1| hypothetical protein [Zea mays]
gi|223974035|gb|ACN31205.1| unknown [Zea mays]
gi|413921836|gb|AFW61768.1| hypothetical protein ZEAMMB73_696968 [Zea mays]
Length = 521
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 177/343 (51%), Gaps = 12/343 (3%)
Query: 42 GKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-D 100
GK FDL+W ++ RM++ + I+ +RY A VN+A+ TF+ +++F ++ D
Sbjct: 147 GKARRFDLAWEIVRRMRNR--GVLTCRVMVILMERYAAASEVNKAIKTFDVMEKFKIESD 204
Query: 101 EVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFK-MSWWG 159
+ + +L+ ALC+ K++ +A+EL F K + + +N+IL GW ++
Sbjct: 205 QSVFYSLLHALCKIKNIEDAEELLFLRKKFFPLTA-------EGFNIILDGWCNVITDVA 257
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+ + W EM + D SY++ + K G + +++Y EMKK+G +V YN+++
Sbjct: 258 EAKRVWREMSNHCITPDGMSYTLMISCFSKVGNLFDTLRVYDEMKKRGWIPGIVVYNSLV 317
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
+ V A ++ ++ + G QP V T N +I LCE+ ++ EA V+ M +G V
Sbjct: 318 YVLTRENCVKDAHNIFSKLTDEGLQPDVETYNNMIVPLCESCKLDEARKVMESMILRGIV 377
Query: 280 PDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
P + TYH F + E E L L +M E G PK DT+VML+ KF VW +
Sbjct: 378 PTISTYHAFLK-QEGIDESLKLLQKMKEDGCGPKSDTFVMLIDKFFLLNESGNALRVWNE 436
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
M + SP Y LV L+ G + A +Y +EM KG ++
Sbjct: 437 MRKYEISPVRAHYMTLVQGLVKHGCIPRALEYYDEMKEKGFAS 479
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 180/359 (50%), Gaps = 23/359 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN+++D LGK +FD + L+ M+DN +P+ T+ + A ++EA F +
Sbjct: 81 TYNTLVDCLGKAGQFDEALRLLAEMRDN-GCVPDVRTYNCLISTLGKAGRLSEAFTLFAE 139
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK------TKIY 145
+ E G + D +Y +L+ L + +A EL L EM + Y
Sbjct: 140 MRERGCVPDTFTYNSLIYGLGKVGRSQKAMEL------------LEEMERHGCPPDVMTY 187
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
+ ++ G K K + ++EM +RG D +++ MD + K+G+ A++L EMK+
Sbjct: 188 SSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKE 247
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+G+K VV YN +I G + A + EM+ GC+P VVT + +I L + ++ E
Sbjct: 248 RGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDE 307
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLR 322
A VL +M K+GC PD ITY+ L K + LFDRM G P + TY L+
Sbjct: 308 ACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLIT 367
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G+ + V++++ME +G PD F Y +++ L G +D A + EM KGLS
Sbjct: 368 ALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLS 426
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 175/352 (49%), Gaps = 11/352 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+S+I LGK E ++ L MK P+ TF + A V++A+ ++
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRK-PDSITFTALMDALGKAGRVDDALELLDE 244
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G+K V +Y L+ + ++EA L +N +V Y+ ++ G
Sbjct: 245 MKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVV------TYSCLITG 298
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K S + + ++M+K G D +Y+ ++ + K+G A +L+ MK KG D
Sbjct: 299 LIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPD 358
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
VV Y+T+I A+G + V+ A ++ EM +G QP + T ++I +L + G+V +A + +
Sbjct: 359 VVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFS 418
Query: 272 EMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM KG PDVITY+ F L + +E +F+ M ESG+ P + TY LL +
Sbjct: 419 EMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTK 478
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + K++ E GC+ D ++ ++ L G +D A + + +KGL
Sbjct: 479 EVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGL 530
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 168/398 (42%), Gaps = 58/398 (14%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+ +++D LGK D + L+ MK+ P T+ + + + EA ++
Sbjct: 221 TFTALMDALGKAGRVDDALELLDEMKERGVK-PGVVTYNALIAGFGKVGDLVEAYNLLDE 279
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK------TKIY 145
+ G K D V+Y L+ L + + EA ++ L +M K T Y
Sbjct: 280 MKRNGCKPDVVTYSCLITGLIKASQLDEACQV------------LKKMEKEGCPPDTITY 327
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N ++ G K ++ M +G D+ +YS + + K+ + A L++EM+
Sbjct: 328 NTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMES 387
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
GI+ D+ Y ++I +G + VD A R++ EMR G P V+T N + L GR +E
Sbjct: 388 VGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKE 447
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIR----------- 311
A + +M + G +PDV TY L K +E+ GL +IE G
Sbjct: 448 ARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLE 507
Query: 312 ------------------------PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
P +Y L+ + G + F + ++E G P
Sbjct: 508 ILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKP 567
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
D +Y++L+ AL G +D A + EEM +GL PR
Sbjct: 568 DIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPR 605
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 128/239 (53%), Gaps = 3/239 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN +L K + + +EE+ D+ SYS ++ + ++GK A+++ EM+
Sbjct: 12 YNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQ 71
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
KG K ++ YNT++ +G + D A+R+ EMR+ GC P V T N +I L + GR+
Sbjct: 72 AKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLS 131
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLL 321
EA+ + AEM ++GCVPD TY+ L K ++ + L + M G P + TY L+
Sbjct: 132 EAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLI 191
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G+ G F ++++M+ G PD + AL+DAL G +D A + +EM +G+
Sbjct: 192 TGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGV 250
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 167/354 (47%), Gaps = 13/354 (3%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T TYNS+I LGK + L+ M+ + P+ T+ + +A F
Sbjct: 149 TFTYNSLIYGLGKVGRSQKAMELLEEMERH-GCPPDVMTYSSLITGLGKDGETVKAFKLF 207
Query: 91 NKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGF-SGLVEMNKTKIYNMI 148
++ G K D +++ L+DAL + V +A EL E K G G+V YN +
Sbjct: 208 QEMKRRGRKPDSITFTALMDALGKAGRVDDALEL-LDEMKERGVKPGVV------TYNAL 260
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G+ K+ + +EM + G D+ +YS + + K+ + +A ++ K+M+K+G
Sbjct: 261 IAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGC 320
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
D + YNT+I +G + ++ A R++ M+ GC P VVT +T+I L + RV A
Sbjct: 321 PPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACV 380
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFG 325
+ EM G PD+ TY L K ++ LF M G+ P + TY L G
Sbjct: 381 LFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLG 440
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R G + +++ M+E G PD Y+AL+ L +D A +E+ +G
Sbjct: 441 RGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQG 494
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 109/204 (53%), Gaps = 3/204 (1%)
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+Y+ ++ + K+G+ +A L++E+K DVV+Y+ +I ++G + + A+ V EM
Sbjct: 11 TYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEM 70
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP--- 295
+ GC+P++ T NT++ L + G+ EA +LAEM GCVPDV TY+C L K
Sbjct: 71 QAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRL 130
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
E LF M E G P TY L+ G+ G + + ++ME GC PD Y++L
Sbjct: 131 SEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSL 190
Query: 356 VDALIDKGMLDMARKYDEEMFAKG 379
+ L G A K +EM +G
Sbjct: 191 ITGLGKDGETVKAFKLFQEMKRRG 214
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 141/302 (46%), Gaps = 11/302 (3%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T TYN++I+ LGK + + L RMK + P+ T+ + A V A F
Sbjct: 324 TITYNTLINGLGKAGLLNDAGRLFDRMKSKGCN-PDVVTYSTLITALGKAARVESACVLF 382
Query: 91 NKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+++ G++ D +YC+++ L + V +A L F E + G S V YN L
Sbjct: 383 EEMESVGIQPDLFTYCSIITVLGKAGQVDDADRL-FSEMRGKGLSPDV-----ITYNAFL 436
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
+ + + R+ +E+M + G++ D+ +Y + + K+ + A L KE+ ++G
Sbjct: 437 NSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCA 496
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
D + ++ + + VD A + + G P + N +I L + GRV EA+
Sbjct: 497 FDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNT 556
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGR 326
L ++ ++G PD+++Y L + +I L + M + G++ +Y L+RK
Sbjct: 557 LEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQD 616
Query: 327 WG 328
WG
Sbjct: 617 WG 618
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 155/335 (46%), Gaps = 11/335 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+ +I L K + D + ++ +M + P+ T+ + A L+N+A F++
Sbjct: 291 TYSCLITGLIKASQLDEACQVLKKM-EKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDR 349
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G D V+Y L+ AL + V E+ + F E ++VG Y I+
Sbjct: 350 MKSKGCNPDVVTYSTLITALGKAARV-ESACVLFEEMESVGIQ-----PDLFTYCSIITV 403
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + EM +G+ D+ +Y+ +++ + + G+ +A K++++MK+ G+ D
Sbjct: 404 LGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPD 463
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V Y+ ++ + ++ VD A + +E+ E GC + + +++L G V EA+ +L
Sbjct: 464 VATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQ 523
Query: 272 EMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
KG P +Y+ L K E + + E G +P + +Y L+ G+ G
Sbjct: 524 FANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTG 583
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
+ F + ++M + G +Y+ LV L D G
Sbjct: 584 QIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQDWG 618
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 96/194 (49%), Gaps = 6/194 (3%)
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
+VV YN+++ A+ + + A ++ E++ P VV+ + +I L G+ A V+
Sbjct: 8 NVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVV 67
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
AEM KGC P++ TY+ CL K E L L M ++G P + TY L+ G+
Sbjct: 68 AEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKA 127
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREE 387
G L F ++ +M E GC PD F YN+L+ L G A + EEM G P
Sbjct: 128 GRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHG--CPPDVM 185
Query: 388 LGTKLVQG-GLDGE 400
+ L+ G G DGE
Sbjct: 186 TYSSLITGLGKDGE 199
>gi|255558584|ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540536|gb|EEF42103.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 439
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 189/383 (49%), Gaps = 14/383 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+ L + N A FF W E H+TH+ Y+++I+ L K ++ + W+LI+ MK
Sbjct: 27 DVLRRFENAGMVAYRFFEWAEKQLHYTHSVRAYHTMIESLAKIRQYQIMWDLINAMKR-- 84
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
+ N TF I+ ++Y A + EA+ TFN ++++ + ++ N L ALC+ K+V +A
Sbjct: 85 KRMLNVETFCIIMRKYARAQKLEEAVYTFNVMEKYDVPPNLAAFNGLFSALCKSKNVRKA 144
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
QE+ F +K+ +K Y ++L GW K K RE + EM G D+ +Y
Sbjct: 145 QEI-FDSSKDRFVPD------SKTYTILLEGWGKTPNLPKAREIFREMVDVGCSPDIVTY 197
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
I +DI+CK+G+ +A+ + KEM K Y+ +I G+ ++ A+ + M +
Sbjct: 198 GIMVDILCKAGRVDEALDIVKEMDLTICKPTSFIYSVLIHTYGIENRIEDAVDTFLGMEK 257
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPRE 297
G + V N +I C+ + + Y VL EM KG P+ T + L + E
Sbjct: 258 NGVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYKGMQPNSRTLNIILNNLIARGETDE 317
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+F RMI+ P DTY M+++ F L VWK M++ P ++ L++
Sbjct: 318 AFRVFRRMIKV-CEPDADTYTMMIKMFCERNELEMALKVWKYMKKKHFVPSMHTFSVLIN 376
Query: 358 ALIDKGMLDMARKYDEEMFAKGL 380
L ++G + A E+M KG+
Sbjct: 377 GLCEEGDVSHACVMLEDMIEKGI 399
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 99/247 (40%), Gaps = 33/247 (13%)
Query: 139 MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK 198
M + + +I+R + + + + M+K V +L +++ +CKS KA +
Sbjct: 87 MLNVETFCIIMRKYARAQKLEEAVYTFNVMEKYDVPPNLAAFNGLFSALCKSKNVRKAQE 146
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
++ K + + D Y ++ G + + A ++REM ++GC P +VT ++ +LC
Sbjct: 147 IFDSSKDRFVP-DSKTYTILLEGWGKTPNLPKAREIFREMVDVGCSPDIVTYGIMVDILC 205
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYV 318
+ GRV EA ++ EM C P Y IE+ I +DT++
Sbjct: 206 KAGRVDEALDIVKEMDLTICKPTSFIYSVLIHTYG------------IENRIEDAVDTFL 253
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
ME+ G D AYNAL+ A + EM K
Sbjct: 254 --------------------GMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYK 293
Query: 379 GLSAKPR 385
G+ R
Sbjct: 294 GMQPNSR 300
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 125/281 (44%), Gaps = 11/281 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + + ++A E F+ + F + TY +++ GK + + M D S P
Sbjct: 136 CKSKNVRKAQEIFD--SSKDRFVPDSKTYTILLEGWGKTPNLPKAREIFREMVDVGCS-P 192
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ IM A V+EA+ ++D K Y L+ + +A +
Sbjct: 193 DIVTYGIMVDILCKAGRVDEALDIVKEMDLTICKPTSFIYSVLIHTYGIENRIEDAVDTF 252
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
G KN G V YN ++ + K++ + EMD +G+ + + +I +
Sbjct: 253 LGMEKN-GVKADVAA-----YNALIGAFCKVNKFKNVYRVLNEMDYKGMQPNSRTLNIIL 306
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ + G+ +A ++++ M K + D Y +I+ ++ A++V++ M++
Sbjct: 307 NNLIARGETDEAFRVFRRMIKV-CEPDADTYTMMIKMFCERNELEMALKVWKYMKKKHFV 365
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
PS+ T + +I LCE G V A +L +M +KG P +T+
Sbjct: 366 PSMHTFSVLINGLCEEGDVSHACVMLEDMIEKGIRPSGVTF 406
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 102/231 (44%), Gaps = 9/231 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY ++DIL K D + +++ M D P + ++ Y + + +A+ TF
Sbjct: 196 TYGIMVDILCKAGRVDEALDIVKEM-DLTICKPTSFIYSVLIHTYGIENRIEDAVDTFLG 254
Query: 93 LDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+++ G+K +V+ Y L+ A C+ + + + G+ ++T N+IL
Sbjct: 255 MEKNGVKADVAAYNALIGAFCKVNKFKNVYRVL----NEMDYKGMQPNSRT--LNIILNN 308
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + M K D +Y++ + + C+ + A+K++K MKKK
Sbjct: 309 LIARGETDEAFRVFRRMIK-VCEPDADTYTMMIKMFCERNELEMALKVWKYMKKKHFVPS 367
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
+ ++ +I + V A + +M E G +PS VT + LL + GR
Sbjct: 368 MHTFSVLINGLCEEGDVSHACVMLEDMIEKGIRPSGVTFGRLRHLLIKEGR 418
>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 186/385 (48%), Gaps = 20/385 (5%)
Query: 9 NDWKRALEFFNWVETDCH-FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
N +AL+FF++++ + H +++ IDI + W+LIHRM+ P+
Sbjct: 68 NHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIG-PSP 126
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFG 126
TF I+ +RY +A ++A+ F + E G +D S+ ++D LC+ K V +A EL
Sbjct: 127 KTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF-- 184
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
G ++ T YN+IL GW + K E +EM +RG+ +L +Y+ +
Sbjct: 185 ----RALRGRFSVD-TVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKG 239
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
++G+ A + + EMKK+ ++DVV Y TV+ GV+ + A V+ EM G PS
Sbjct: 240 FFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPS 299
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFD 303
V T N +I++LC+ V A + EM ++G P+V TY+ R L E L
Sbjct: 300 VATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQ 359
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
RM G P TY M++R + + +++KM C P+ YN L+ +
Sbjct: 360 RMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMF--- 416
Query: 364 MLDMARKYDEEMFAKGLSAKPREEL 388
RK E+M G A +E L
Sbjct: 417 ----VRKRSEDMVVAGNQAFAKEIL 437
>gi|359492357|ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 476
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 189/380 (49%), Gaps = 18/380 (4%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+ N A +FF W ++TH+ Y+++I+ L K ++ + W+L+++M+ I N
Sbjct: 53 FENAGMLAYQFFEWAGKQRNYTHSIRAYHTMIESLAKIRQYQIMWDLVNKMRS--LKILN 110
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCF 125
TF I+ ++Y + V EA+ TFN ++++ + ++ N L+ ALC+ K+V++AQE+
Sbjct: 111 VETFCIIMRKYARSQKVKEAVYTFNIMEKYDVPPNLAAFNSLLSALCKSKNVVKAQEI-- 168
Query: 126 GENKNVGFSGLVE--MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F+G+ + + +K Y+++L GW K K RE + EM G D+ +Y I
Sbjct: 169 -------FNGMKDQFIPDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCDPDIVTYGIM 221
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+DI+CK+G+ +AV + KEM K Y+ ++ G+ ++ A+ + +M
Sbjct: 222 VDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIENRIEDAVYTFLDMERNEI 281
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILG 300
+ V N +I C+ +++ AY VL EM KG P+ T + L E
Sbjct: 282 EADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFR 341
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+F RMI+ P DTY M+++ F L VWK M P ++ L++ L
Sbjct: 342 VFRRMIKV-CDPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSMHTFSVLINGLC 400
Query: 361 DKGMLDMARKYDEEMFAKGL 380
KG A EEM KG+
Sbjct: 401 KKGNASKACILLEEMIEKGI 420
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 111/254 (43%), Gaps = 10/254 (3%)
Query: 141 KTKIYNMILRGWFKM-SWWGKCREF---WEEMDKRGVVK--DLHSYSIYMDIMCKSGKPW 194
K + Y +R + M K R++ W+ ++K +K ++ ++ I M +S K
Sbjct: 69 KQRNYTHSIRAYHTMIESLAKIRQYQIMWDLVNKMRSLKILNVETFCIIMRKYARSQKVK 128
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
+AV + M+K + ++ A+N+++ A+ S+ V A ++ M++ P T + ++
Sbjct: 129 EAVYTFNIMEKYDVPPNLAAFNSLLSALCKSKNVVKAQEIFNGMKDQFI-PDSKTYSILL 187
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIR 311
+ + + +A + EM GC PD++TY L K E +G+ M S +
Sbjct: 188 EGWGKAPNLPKAREIFREMVDMGCDPDIVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCK 247
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
P Y +L+ +G + + ME D YNAL+ A L A +
Sbjct: 248 PTSFIYSVLVHTYGIENRIEDAVYTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYRV 307
Query: 372 DEEMFAKGLSAKPR 385
EM KG+ R
Sbjct: 308 LNEMDCKGIRPNSR 321
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 128/283 (45%), Gaps = 33/283 (11%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+NS++ L K + + + MKD IP+ T+ I+ + + A + +A F +
Sbjct: 148 AFNSLLSALCKSKNVVKAQEIFNGMKD--QFIPDSKTYSILLEGWGKAPNLPKAREIFRE 205
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG------FSGLV-------- 137
+ + G D V+Y +VD LC+ V EA + + +V +S LV
Sbjct: 206 MVDMGCDPDIVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIENR 265
Query: 138 ---------EMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+M + +I YN ++ + K++ EMD +G+ + + +I
Sbjct: 266 IEDAVYTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNI 325
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ + G +A ++++ M K D Y +I+ ++ ++ A++V++ MR
Sbjct: 326 ILNSLISCGDTDEAFRVFRRMIK-VCDPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQ 384
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
PS+ T + +I LC+ G +A +L EM +KG P +T+
Sbjct: 385 FVPSMHTFSVLINGLCKKGNASKACILLEEMIEKGIRPSSVTF 427
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 100/236 (42%), Gaps = 19/236 (8%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY ++DIL K D + ++ M D+ P + ++ Y + + +A+ TF
Sbjct: 217 TYGIMVDILCKAGRVDEAVGIVKEM-DSSVCKPTSFIYSVLVHTYGIENRIEDAVYTFLD 275
Query: 93 LDEFGLKDEVS-YCNLVDALCEYKHVIEAQEL-----CFGENKNVGFSGLVEMNKTKIYN 146
++ ++ +V+ Y L+ A C+ + A + C G N ++ N
Sbjct: 276 MERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPN-----------SRTCN 324
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
+IL + + M K D +Y++ + + C++ K A+K++K M+ K
Sbjct: 325 IILNSLISCGDTDEAFRVFRRMIK-VCDPDADTYTMMIKMFCENDKLEMALKVWKYMRLK 383
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
+ ++ +I + A + EM E G +PS VT + +LL + GR
Sbjct: 384 QFVPSMHTFSVLINGLCKKGNASKACILLEEMIEKGIRPSSVTFGKLKQLLIKEGR 439
>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 186/385 (48%), Gaps = 20/385 (5%)
Query: 9 NDWKRALEFFNWVETDCH-FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
N +AL+FF++++ + H +++ IDI + W+LIHRM+ P+
Sbjct: 62 NHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIG-PSP 120
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFG 126
TF I+ +RY +A ++A+ F + E G +D S+ ++D LC+ K V +A EL
Sbjct: 121 KTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF-- 178
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
G ++ T YN+IL GW + K E +EM +RG+ +L +Y+ +
Sbjct: 179 ----RALRGRFSVD-TVTYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNTMLKG 233
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
++G+ A + + EMKK+ ++DVV Y TV+ GV+ + A V+ EM G PS
Sbjct: 234 FFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPS 293
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFD 303
V T N +I++LC+ V A + EM ++G P+V TY+ R L E L
Sbjct: 294 VATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQ 353
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
RM G P TY M++R + + +++KM C P+ YN L+ +
Sbjct: 354 RMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMF--- 410
Query: 364 MLDMARKYDEEMFAKGLSAKPREEL 388
RK E+M G A +E L
Sbjct: 411 ----VRKRSEDMVVAGNQAFAKEIL 431
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 187/378 (49%), Gaps = 25/378 (6%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
ND +AL+FFN + ++H +Y+ IDI + + +L++RM+ P
Sbjct: 79 NDGPKALQFFNLLSHHPSYSHHPSSYDHAIDISARLRDSPSLRSLVYRMRSARLG-PTPK 137
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGE 127
TF I+ +RY +A + A+ F + +FG +D S+ ++D LC+ K V E+ +
Sbjct: 138 TFAIIAERYASAGKPHRAVKVFLSMHQFGCFQDLQSFNTILDVLCKSKRV----EMAYNL 193
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
K F G + YN+++ GW + K E +EM KRG+ +L SY+ +
Sbjct: 194 FK--VFKGKFRADCVS-YNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGY 250
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
++G+ +A + EMKK+ ++DV+ Y TVI GV+ + A +V+ M + G PSV
Sbjct: 251 FRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSV 310
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL------EKPREILGL 301
T N I++LC+ V A + EM KG VP+ ITY+ R L E+ E +G
Sbjct: 311 ATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEFMG- 369
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
RM + G P + TY +++R F G + +++KM C P+ YN L+ A+
Sbjct: 370 --RMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGDCLPNLDTYNILISAMF- 426
Query: 362 KGMLDMARKYDEEMFAKG 379
RK +++ G
Sbjct: 427 ------VRKKSDDLLVAG 438
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 77/153 (50%), Gaps = 4/153 (2%)
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR 290
A++V+ M + GC + + NT++ +LC++ RV AY L ++ K D ++Y+
Sbjct: 155 AVKVFLSMHQFGCFQDLQSFNTILDVLCKSKRVEMAYN-LFKVFKGKFRADCVSYNVMVN 213
Query: 291 --CL-EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
CL ++ + L + M++ G+ P + +Y +L+ + R G + + + +M++ C
Sbjct: 214 GWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEI 273
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
D Y ++ G + ARK + M KG+
Sbjct: 274 DVITYTTVIHGFGVAGEIKRARKVFDTMVKKGV 306
>gi|449469288|ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 184/372 (49%), Gaps = 12/372 (3%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A FF W + F + D+Y+ V+DILG +F + W+ + +++ SS+ H F +
Sbjct: 98 AHRFFLWAKRIPGFEPSDDSYHIVVDILGSSGQFAILWDFLIEIRETRSSVITHELFWHV 157
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVG 132
F Y A L +A+ FN++ EFG++ V + L+ LC+ KHV AQ+ F + K+V
Sbjct: 158 FTAYSRADLPQDAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQF-FDKVKSV- 215
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
F+ V K Y+++ RGW + ++ ++EM +RG + D+ +Y+ ++ +CK GK
Sbjct: 216 FNPSV-----KTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGK 270
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
+A K++ EM G+ D Y+ IR+ + RV + P+V T N
Sbjct: 271 RDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNC 330
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF--FRC-LEKPREILGLFDRMIESG 309
VIK LC++ V EAY +L EM ++G PD +Y+ + C + L L RM
Sbjct: 331 VIKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDK 390
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG-MLDMA 368
P TY M+L+ R G VW+ M + G P Y ++ K L+ A
Sbjct: 391 CVPDKHTYNMVLKLLVRVGRFDRANEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEA 450
Query: 369 RKYDEEMFAKGL 380
KY E M +G+
Sbjct: 451 CKYFEMMIDEGI 462
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 95/207 (45%), Gaps = 8/207 (3%)
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
H ++ Y ++ P A++ + M + GI+ V + ++ + + V A + + +
Sbjct: 156 HVFTAY----SRADLPQDAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDK 211
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EK 294
++ + PSV T + + + G A V EM ++GC+ DV+ Y+ L K
Sbjct: 212 VKSV-FNPSVKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGK 270
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
E +F M +G+ P DTY + +R + L V+ V ++ + P+ F YN
Sbjct: 271 RDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNC 330
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLS 381
++ L ++ A + +EM +G++
Sbjct: 331 VIKKLCKDQNVEEAYQILDEMIERGVT 357
>gi|224123682|ref|XP_002319140.1| predicted protein [Populus trichocarpa]
gi|222857516|gb|EEE95063.1| predicted protein [Populus trichocarpa]
Length = 296
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 123/218 (56%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M KRG+ D+ SY+ M K+G ++ ++LYK+MKK GI+ D YN VI A+
Sbjct: 1 MSKRGIRFDVVSYASMMSCYSKAGSLYRVLRLYKQMKKIGIEPDRKVYNAVIHALAKGRL 60
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
V+ A + + M E G P++VT N++IK LC +V EA +M K+ P + TYH
Sbjct: 61 VNEAFNLMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLKRCISPTIRTYHA 120
Query: 288 FFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
F R L E+ L ++M + G +P DTY+ML+RKF RW L VF +W +M E G SP
Sbjct: 121 FLRILRTGEEVFALLEKMRKMGCQPINDTYIMLIRKFCRWRQLENVFKLWDEMSENGISP 180
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
D +Y L+ L G LD A KY EM K L +P+
Sbjct: 181 DRSSYIVLIHGLFLNGELDAAHKYYTEMKEKQLLPEPK 218
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 117/274 (42%), Gaps = 45/274 (16%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWG 159
D VSY +++ + + L + + K +G +E ++ K+YN ++ K
Sbjct: 9 DVVSYASMMSCYSKAGSLYRVLRL-YKQMKKIG----IEPDR-KVYNAVIHALAKGRLVN 62
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+ + M+++GV ++ +Y+ + +C++ K +A + +M K+ I + Y+ +
Sbjct: 63 EAFNLMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLKRCISPTIRTYHAFL 122
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
R + E V FA+ +MR+MGCQP + + Y +L
Sbjct: 123 RILRTGEEV-FAL--LEKMRKMGCQP-----------------INDTYIML--------- 153
Query: 280 PDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
I C +R LE + L+D M E+GI P +Y++L+ G L + +
Sbjct: 154 ---IRKFCRWRQLEN---VFKLWDEMSENGISPDRSSYIVLIHGLFLNGELDAAHKYYTE 207
Query: 340 MEELGCSP----DEFAYNALVDALIDKGMLDMAR 369
M+E P DE L + I +G +R
Sbjct: 208 MKEKQLLPEPKIDEMLQTWLSNKQIAEGQTTESR 241
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 12/207 (5%)
Query: 4 LSCY--ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+SCY A R L + ++ YN+VI L K + ++NL+ M++
Sbjct: 17 MSCYSKAGSLYRVLRLYKQMK-KIGIEPDRKVYNAVIHALAKGRLVNEAFNLMKTMEEKG 75
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQ 121
+ PN T+ + K A V EA G F+ + LK +S + + ++
Sbjct: 76 VA-PNIVTYNSLIKPLCRARKVEEAKGAFDDM----LKRCIS--PTIRTYHAFLRILRTG 128
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
E F + + G +N T Y M++R + + + W+EM + G+ D SY
Sbjct: 129 EEVFALLEKMRKMGCQPINDT--YIMLIRKFCRWRQLENVFKLWDEMSENGISPDRSSYI 186
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ + + +G+ A K Y EMK+K +
Sbjct: 187 VLIHGLFLNGELDAAHKYYTEMKEKQL 213
>gi|356499253|ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Glycine max]
Length = 510
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/394 (28%), Positives = 192/394 (48%), Gaps = 23/394 (5%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
TL N K AL F++ +T + + ++ +ID + K +FD++W LI M
Sbjct: 72 HTLLRLKNHSKIALSLFHYAKTLPNPPLSHSSFTLLIDTMAKVRQFDVAWQLIVEMDQRH 131
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS--YCNLVDALCEYKHVIE 119
P +TF + +R + A L +A+ F+ +D F +C L+D LC+Y HV
Sbjct: 132 HLTPTPSTFLTLIRRLICAGLTRQAVRAFHDIDAFSETKTTPQDFCVLLDTLCKYGHVRL 191
Query: 120 AQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
A E+ F +NK+ F V+M Y +++ GW K+ + F EM +G+ ++ +
Sbjct: 192 AVEV-FNKNKHT-FPPTVKM-----YTVLIYGWCKIGRIKTAQSFLNEMIDKGIEPNVVT 244
Query: 180 YSIYMDIMCK--SGKPWK--------AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVD 229
Y++ ++ +C+ S P + A +++ +M++ GI+ DV +++ ++ +
Sbjct: 245 YNVLLNGVCRKVSLHPEERFERTIRNAEEVFDQMRESGIEPDVTSFSILLHVYSRAHKPQ 304
Query: 230 FAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF- 288
+ M+E G P+VV +VIK L G + +A +L EM + G P TY+CF
Sbjct: 305 LVLDKLSLMKEKGICPNVVMYTSVIKCLASCGWLEDAERLLGEMVRDGVSPCAATYNCFF 364
Query: 289 --FRCLEKPREILGLFDRMIESGI-RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
FR + L +F RM E G+ P TYV+L+R F R ++ V +W+ M+E G
Sbjct: 365 KEFRGRKDGESALRMFKRMKEDGLCMPSSHTYVILIRMFLRLDMIKVVKEIWQDMKETGA 424
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
PD Y L+ L ++ A Y EM G
Sbjct: 425 GPDLDLYTVLIHGLCERQRWREACHYFVEMIENG 458
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 19/154 (12%)
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC----------------F 288
P+V +I C+ GR++ A + L EM KG P+V+TY+ F
Sbjct: 205 PTVKMYTVLIYGWCKIGRIKTAQSFLNEMIDKGIEPNVVTYNVLLNGVCRKVSLHPEERF 264
Query: 289 FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
R + E+ FD+M ESGI P + ++ +LL + R + V M+E G P+
Sbjct: 265 ERTIRNAEEV---FDQMRESGIEPDVTSFSILLHVYSRAHKPQLVLDKLSLMKEKGICPN 321
Query: 349 EFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
Y +++ L G L+ A + EM G+S
Sbjct: 322 VVMYTSVIKCLASCGWLEDAERLLGEMVRDGVSP 355
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 115/298 (38%), Gaps = 19/298 (6%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + A+E FN + F T Y +I K + + ++ M D P
Sbjct: 184 CKYGHVRLAVEVFN--KNKHTFPPTVKMYTVLIYGWCKIGRIKTAQSFLNEMIDKGIE-P 240
Query: 66 NHATFRIMFK---RYVTAH-------LVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYK 115
N T+ ++ R V+ H + A F+++ E G++ +V+ +++ +
Sbjct: 241 NVVTYNVLLNGVCRKVSLHPEERFERTIRNAEEVFDQMRESGIEPDVTSFSILLHVYSRA 300
Query: 116 HVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVK 175
H + K G V M Y +++ W EM + GV
Sbjct: 301 HKPQLVLDKLSLMKEKGICPNVVM-----YTSVIKCLASCGWLEDAERLLGEMVRDGVSP 355
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV-AYNTVIRAVGVSEGVDFAMRV 234
+Y+ + A++++K MK+ G+ M Y +IR + + +
Sbjct: 356 CAATYNCFFKEFRGRKDGESALRMFKRMKEDGLCMPSSHTYVILIRMFLRLDMIKVVKEI 415
Query: 235 YREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
+++M+E G P + +I LCE R REA EM + G +P T+ +R L
Sbjct: 416 WQDMKETGAGPDLDLYTVLIHGLCERQRWREACHYFVEMIENGFLPLKGTFESLYRGL 473
>gi|449484422|ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 184/372 (49%), Gaps = 12/372 (3%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A FF W + F + D+Y+ V+DILG +F + W+ + +++ SS+ H F +
Sbjct: 98 AHRFFLWAKRIPGFEPSDDSYHIVVDILGGSGQFAILWDFLIEIRETRSSVITHELFWHV 157
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVG 132
F Y A L +A+ FN++ EFG++ V + L+ LC+ KHV AQ+ F + K+V
Sbjct: 158 FTAYSRADLPQDAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQF-FDKVKSV- 215
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
F+ V K Y+++ RGW + ++ ++EM +RG + D+ +Y+ ++ +CK GK
Sbjct: 216 FNPSV-----KTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGK 270
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
+A K++ EM G+ D Y+ IR+ + RV + P+V T N
Sbjct: 271 RDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNC 330
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF--FRC-LEKPREILGLFDRMIESG 309
VIK LC++ V EAY +L EM ++G PD +Y+ + C + L L RM
Sbjct: 331 VIKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDK 390
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG-MLDMA 368
P TY M+L+ R G VW+ M + G P Y ++ K L+ A
Sbjct: 391 CVPDKHTYNMVLKLLVRVGRFDRANEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEA 450
Query: 369 RKYDEEMFAKGL 380
KY E M +G+
Sbjct: 451 CKYFEMMIDEGI 462
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 95/207 (45%), Gaps = 8/207 (3%)
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
H ++ Y ++ P A++ + M + GI+ V + ++ + + V A + + +
Sbjct: 156 HVFTAY----SRADLPQDAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDK 211
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EK 294
++ + PSV T + + + G A V EM ++GC+ DV+ Y+ L K
Sbjct: 212 VKSV-FNPSVKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGK 270
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
E +F M +G+ P DTY + +R + L V+ V ++ + P+ F YN
Sbjct: 271 RDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNC 330
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLS 381
++ L ++ A + +EM +G++
Sbjct: 331 VIKKLCKDQNVEEAYQILDEMIERGVT 357
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 182/376 (48%), Gaps = 20/376 (5%)
Query: 9 NDWKRALEFFNWVETDCH-FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
N +AL+FF++++ + H +++ IDI + W+LIHRM+ P+
Sbjct: 68 NHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIG-PSP 126
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFG 126
TF I+ +RY +A ++A+ F + E G +D S+ ++D LC+ K V +A EL
Sbjct: 127 KTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF-- 184
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
G ++ T YN+IL GW + K E +EM +RG+ +L +Y+ +
Sbjct: 185 ----RALRGRFSVD-TVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKG 239
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
++G+ A + + EMKK+ ++DVV Y TV+ GV+ + A V+ EM G PS
Sbjct: 240 FFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPS 299
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFD 303
V T N +I++LC+ V A + EM ++G P+V TY+ R L E L
Sbjct: 300 VATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQ 359
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
RM G P TY M++R + + +++KM C P+ YN L+ +
Sbjct: 360 RMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMF--- 416
Query: 364 MLDMARKYDEEMFAKG 379
RK E+M G
Sbjct: 417 ----VRKRSEDMVVAG 428
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 103/226 (45%), Gaps = 6/226 (2%)
Query: 160 KCREFWEEMDK--RGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
K +F+ +D R V D S+ + +DI + L M+ I +
Sbjct: 72 KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAI 131
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
V + D A++++ M E GC + + NT++ +LC++ RV +AY + + +
Sbjct: 132 VAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRF 191
Query: 278 CVPDVITYHCFFR--CL-EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
V D +TY+ CL ++ + L + M+E GI P + TY +L+ F R G +R +
Sbjct: 192 SV-DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAW 250
Query: 335 VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ +M++ C D Y +V G + AR +EM +G+
Sbjct: 251 EFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGV 296
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 173/364 (47%), Gaps = 41/364 (11%)
Query: 13 RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
+ L FFNW F + + YN ++D G+ FD++W I MK + TF I
Sbjct: 76 QVLAFFNWASNQDGFRKSPEAYNEMVDFSGQVMMFDVAWYFIDLMKARNVDV-TVETFLI 134
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNV 131
+ +RYV A L EA+ FN+++++ K D++++ L+ LC + +AQE F K+
Sbjct: 135 LMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRERRASQAQEF-FDSLKDK 193
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
++ +Y ++RGW + + + EM G+ ++++YSI +D +C+ G
Sbjct: 194 FEPDVI------VYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCG 247
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
+ +A ++ EM G + + + YN+++R + + ++VY +M+ +GC+P VT N
Sbjct: 248 QITRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYN 307
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIR 311
+I+ C++ + +A V+ M KKGC P+ T++ F C+ K
Sbjct: 308 FLIETHCKDENLEDAIKVIGLMAKKGCAPNASTFNTLFGCIAK----------------- 350
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
G + ++KKM+EL C + YN L+ + DM K
Sbjct: 351 ---------------LGDVNAAHRMYKKMKELNCEANTVTYNTLMKMFVASKSTDMVLKL 395
Query: 372 DEEM 375
EM
Sbjct: 396 KTEM 399
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 110/255 (43%), Gaps = 22/255 (8%)
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
N+ V FSG V M F ++W+ F + M R V + ++ I M
Sbjct: 98 NEMVDFSGQVMM-------------FDVAWY-----FIDLMKARNVDVTVETFLILMRRY 139
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
++G +A+ + M+ K D +A++ +I + A + +++ +P V
Sbjct: 140 VRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRERRASQAQEFFDSLKD-KFEPDV 198
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDR 304
+ +++ C G + EA V EM G P+V TY L + +I +F
Sbjct: 199 IVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAE 258
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
M+++G +P TY L+R + G V V+ +M+ LGC PD YN L++
Sbjct: 259 MLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDEN 318
Query: 365 LDMARKYDEEMFAKG 379
L+ A K M KG
Sbjct: 319 LEDAIKVIGLMAKKG 333
>gi|242078797|ref|XP_002444167.1| hypothetical protein SORBIDRAFT_07g011860 [Sorghum bicolor]
gi|241940517|gb|EES13662.1| hypothetical protein SORBIDRAFT_07g011860 [Sorghum bicolor]
Length = 520
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 181/354 (51%), Gaps = 12/354 (3%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
D ++ + GK FDL+W ++ RM++ + I+ +RY A+ VN+A+ TF
Sbjct: 136 ADAWHLAVWAAGKARRFDLAWAVVRRMRNR--GVLTGRAMVILMERYAAANEVNKAVKTF 193
Query: 91 NKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+ +++F ++ D+ + +L+ ALC+ K++ +A+EL K S + +N+IL
Sbjct: 194 DVMEKFKVESDQSVFYSLLRALCKSKNIEDAEELLLLRKKFFPLSA-------EGFNIIL 246
Query: 150 RGWFK-MSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
GW ++ + + W EM + D SY++ + K G + +++Y EMKK+G
Sbjct: 247 DGWCNVITDLAEAKRVWREMSNHCITPDGMSYTLMISCFSKVGSLFDTLRVYDEMKKRGW 306
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ YN+++ + V A ++ ++ + G QP V T N++I LCE+ ++ EA
Sbjct: 307 IPGIGVYNSLVYVLTRENCVKDAHNIFSKLTDEGLQPDVETYNSMIVPLCESCKLDEARV 366
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
V+ M KG VP + TYH F + E E L L +M E G PK DT++ML KF
Sbjct: 367 VMESMILKGIVPTISTYHAFLK-QEGIDESLKLLQKMKEDGCGPKSDTFLMLFDKFFLLN 425
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
VW +M + SP Y +V+ L+ G + A +Y +EM KG ++
Sbjct: 426 ESGNALRVWNEMRKYKISPVRSHYMTVVEGLVKHGCIPRALEYYDEMKEKGFAS 479
>gi|357455845|ref|XP_003598203.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487251|gb|AES68454.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 503
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 193/387 (49%), Gaps = 28/387 (7%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
K AL N+ ++ + + +YN +IDI+ K +FDL+ LI M D + P TF
Sbjct: 76 KIALSLHNFSKSLPNPPLSLQSYNLLIDIVSKVHQFDLASQLIVEM-DQINLPPTPTTFF 134
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFG----LKDEVSYCNLVDALCEYKHVIEAQELCFGE 127
I+ KR ++A+L +A+ FN+++ + D +Y L+D LC+Y +V A EL F
Sbjct: 135 ILIKRLISANLTRQAVRAFNEIESYTDTKLTSDHFTY--LLDTLCKYGYVKHACEL-FNR 191
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
N N + + K+Y +++ GW K+ + F EM +GV ++ +Y++ ++ +
Sbjct: 192 NSNRFVADV------KMYTVLIYGWCKIGRFKTALSFLNEMKVKGVEPNVVTYNVILNGI 245
Query: 188 CK--SGKPWK--------AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
C+ S P + A K++ EM++ GI+ DV +++ V+ + +
Sbjct: 246 CRKASLHPEERFERTIRDAEKVFDEMRESGIEPDVTSFSIVLHVYSRAHKPQLVLDKLGL 305
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF---RCLEK 294
M+E G P+VVT +VIK LC GR+ EA ++ EM + G P TY+CFF R +
Sbjct: 306 MKEKGICPNVVTYTSVIKCLCSCGRIEEAEDLIDEMVRNGVSPCAATYNCFFKEYRGRKD 365
Query: 295 PREILGLFDRMIESGI-RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
+ L F +M E G+ P TY +L+ F + + V +W M E G PD +Y
Sbjct: 366 ADKALKFFKKMKEDGLCEPTTHTYGVLIAMFLKADMIGVVKEIWNDMMESGVGPDLDSYT 425
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGL 380
L+ L + A +Y EM KG
Sbjct: 426 VLIHGLCESKKWREACQYFVEMIEKGF 452
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 17/139 (12%)
Query: 258 CENGRVREAYAVLAEMPKKGCVPDVITYHCFF-------------RCLEKPREILGLFDR 304
C+ GR + A + L EM KG P+V+TY+ R R+ +FD
Sbjct: 211 CKIGRFKTALSFLNEMKVKGVEPNVVTYNVILNGICRKASLHPEERFERTIRDAEKVFDE 270
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK--MEELGCSPDEFAYNALVDALIDK 362
M ESGI P + ++ ++L + R +P V+ K M+E G P+ Y +++ L
Sbjct: 271 MRESGIEPDVTSFSIVLHVYSRAH--KPQLVLDKLGLMKEKGICPNVVTYTSVIKCLCSC 328
Query: 363 GMLDMARKYDEEMFAKGLS 381
G ++ A +EM G+S
Sbjct: 329 GRIEEAEDLIDEMVRNGVS 347
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 37/216 (17%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
P+ +F I+ Y AH + + E G+ + V+Y +++ LC + EA++L
Sbjct: 278 PDVTSFSIVLHVYSRAHKPQLVLDKLGLMKEKGICPNVVTYTSVIKCLCSCGRIEEAEDL 337
Query: 124 -----------------CF--------GENKNVGF------SGLVEMNKTKIYNMILRGW 152
CF +K + F GL E T Y +++ +
Sbjct: 338 IDEMVRNGVSPCAATYNCFFKEYRGRKDADKALKFFKKMKEDGLCEPT-THTYGVLIAMF 396
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K G +E W +M + GV DL SY++ + +C+S K +A + + EM +KG
Sbjct: 397 LKADMIGVVKEIWNDMMESGVGPDLDSYTVLIHGLCESKKWREACQYFVEMIEKGFLPQK 456
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
V + T+ R + S+ +R +R +++ Q S+
Sbjct: 457 VTFETLYRGLIQSD----MLRTWRRLKKRLDQESIT 488
>gi|255548471|ref|XP_002515292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545772|gb|EEF47276.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 190/397 (47%), Gaps = 17/397 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C+A K A FF W F H + TYNS++ IL K +F+ +++ M +
Sbjct: 106 CHAR--KPAFRFFCWAGEKQGFEHDSRTYNSMMSILAKTRQFETVVSMLEEM--GGKGVL 161
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELC 124
TF I + + A +A+ F + ++ K V N L+D+L K EAQ L
Sbjct: 162 TMDTFSIAMRAFAAAKERKKAVAMFELMKKYNYKVGVETINHLLDSLGRAKLGKEAQALF 221
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
EN F+ + Y ++L GW K+ + W EM +G D+ +++I +
Sbjct: 222 --ENLKGRFT-----PNLRTYTVLLNGWCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIML 274
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ + +S + A+KL+ MK KG DV +Y +IR + ++ A+ ++EM + GC+
Sbjct: 275 EGLLRSKQRSDAIKLFMVMKAKGPSPDVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCK 334
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGL 301
P +I R+ Y +L EM ++GC PD +TY+ + + + P + +
Sbjct: 335 PDAAVYTCLITGFGNRKRMDMVYDLLKEMKEEGCPPDGLTYNALIKLMTRLKMPDDAARI 394
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
+ +M +SGI P + TY M+++ + + VW +M G PD+ +Y L+ LI
Sbjct: 395 YKKMTQSGIEPTIHTYNMIMKSYFQTRNYEMGRAVWDEMSRKGFCPDDNSYTVLIGGLIS 454
Query: 362 KGMLDMARKYDEEMFAKGLSAKPRE--ELGTKLVQGG 396
+G A KY EEM KG+ A + + G L +GG
Sbjct: 455 QGRSGEACKYLEEMLEKGMKAPQLDYNKFGADLSRGG 491
>gi|297839365|ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333405|gb|EFH63823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 451
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 186/393 (47%), Gaps = 20/393 (5%)
Query: 9 NDWKRALEFFNWVETDCH-FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
N +AL+FF++++ + H +++ IDI + W+LIHRM+ P+
Sbjct: 66 NHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHIHPTVWSLIHRMRSLRIG-PSP 124
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFG 126
TF I+ +RY ++ ++A+ F + E G +D S+ ++D LC+ K V +A EL
Sbjct: 125 KTFAIVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRA 184
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
FS T YN+I+ GW + K E +EM RG+ +L +Y+ +
Sbjct: 185 LRGR--FSA-----DTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYNTMLQG 237
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
++G+ +A + + EMKK+ ++DVV Y TV+ GV+ + V+ EM G PS
Sbjct: 238 FFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVLPS 297
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFD 303
V T N I++LC+ V A + EM +KG P+V TY+ R L + L
Sbjct: 298 VATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQ 357
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
RM G P TY M++R + + +++KM C P+ YN L+ +
Sbjct: 358 RMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGTGDCLPNLDTYNILISGMF--- 414
Query: 364 MLDMARKYDEEMFAKGLSAKPREELGTKLVQGG 396
RK E+M G A +E L + GG
Sbjct: 415 ----VRKRSEDMVVAGNQAFAKEILRLQSKSGG 443
>gi|297842515|ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334980|gb|EFH65398.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 482
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 184/372 (49%), Gaps = 16/372 (4%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A FF W E H+ H+ Y+ +I+ K ++ L W+LI+ M + N TF I+
Sbjct: 82 AYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMMKK--KMLNVETFCIV 139
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
++Y A V+EA+ FN ++++ L V++ L+ ALC+ K+V +AQE+ EN
Sbjct: 140 MRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEIF--ENMRDR 197
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
F+ +K Y+++L GW K K RE + EM G + D+ +YSI +DI+CK+G+
Sbjct: 198 FTP-----DSKTYSILLEGWGKEPNLPKAREVFREMVDAGSLPDIVTYSIMVDILCKAGR 252
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
+A+ + + M K Y+ ++ G ++ A+ + EM G + V N+
Sbjct: 253 VDEALGIVRSMDPSICKPTTFIYSVLVHTYGTETRLEEAVDTFLEMERSGMKADVAVFNS 312
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL----EKPREILGLFDRMIES 308
+I C+ R++ Y VL EM KG P+ + + R L EK E +F +MI+
Sbjct: 313 LIGAFCKTNRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIDRGEKD-EAFDVFRKMIKV 371
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
P DTY M+++ F + VWK M + G P ++ L++ L ++ A
Sbjct: 372 -CEPDADTYTMMIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEEPNTQKA 430
Query: 369 RKYDEEMFAKGL 380
EEM G+
Sbjct: 431 CVLLEEMIEMGI 442
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 124/281 (44%), Gaps = 11/281 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + + ++A E F + FT + TY+ +++ GK + + M D S+P
Sbjct: 179 CKSKNVRKAQEIFENMRD--RFTPDSKTYSILLEGWGKEPNLPKAREVFREMVD-AGSLP 235
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELC 124
+ T+ IM A V+EA+G +D K Y LV + EA +
Sbjct: 236 DIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTETRLEEAVD-T 294
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F E + G V ++N ++ + K + +EM +GV + S +I +
Sbjct: 295 FLEMERSGMKADV-----AVFNSLIGAFCKTNRMKNVYRVLKEMKSKGVTPNSKSCNIIL 349
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ G+ +A ++++M K + D Y +I+ + ++ A +V++ MR+ G
Sbjct: 350 RHLIDRGEKDEAFDVFRKMIK-VCEPDADTYTMMIKMFCEKKEMETADKVWKYMRKKGVF 408
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
PS+ T + +I LCE ++A +L EM + G P T+
Sbjct: 409 PSMHTFSVLINGLCEEPNTQKACVLLEEMIEMGIRPSGATF 449
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 113/249 (45%), Gaps = 5/249 (2%)
Query: 140 NKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKL 199
+ + Y+M++ K+ + + M K+ ++ ++ ++ I M ++ K +A+
Sbjct: 97 HSVRAYHMMIESTAKIRQYKLMWDLINAMMKKKML-NVETFCIVMRKYARAQKVDEAIYA 155
Query: 200 YKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCE 259
+ M+K + ++VA+N ++ A+ S+ V A ++ MR+ P T + +++ +
Sbjct: 156 FNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEIFENMRD-RFTPDSKTYSILLEGWGK 214
Query: 260 NGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDT 316
+ +A V EM G +PD++TY L K E LG+ M S +P
Sbjct: 215 EPNLPKAREVFREMVDAGSLPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFI 274
Query: 317 YVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
Y +L+ +G L + +ME G D +N+L+ A + + +EM
Sbjct: 275 YSVLVHTYGTETRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKTNRMKNVYRVLKEMK 334
Query: 377 AKGLSAKPR 385
+KG++ +
Sbjct: 335 SKGVTPNSK 343
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 106/231 (45%), Gaps = 9/231 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+ ++DIL K D + ++ M D P + ++ Y T + EA+ TF +
Sbjct: 239 TYSIMVDILCKAGRVDEALGIVRSM-DPSICKPTTFIYSVLVHTYGTETRLEEAVDTFLE 297
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
++ G+K +V+ N L+ A C+ + + E K+ G + +K N+ILR
Sbjct: 298 MERSGMKADVAVFNSLIGAFCKTNRMKNVYRV-LKEMKSKGVTP-----NSKSCNIILRH 351
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + + +M K D +Y++ + + C+ + A K++K M+KKG+
Sbjct: 352 LIDRGEKDEAFDVFRKMIK-VCEPDADTYTMMIKMFCEKKEMETADKVWKYMRKKGVFPS 410
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
+ ++ +I + A + EM EMG +PS T + +LL + R
Sbjct: 411 MHTFSVLINGLCEEPNTQKACVLLEEMIEMGIRPSGATFGRLRQLLLKEDR 461
>gi|356544698|ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 495
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 188/377 (49%), Gaps = 21/377 (5%)
Query: 9 NDWKRALEFFNWVETD-CHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
N +AL+FF ++ +TH+ +++ +DI + +F+ +W L+ RM+ P+
Sbjct: 81 NHGPKALQFFKHLDRHHPSYTHSPSSFDHAVDIAARMRDFNSAWALVGRMRSLRLG-PSP 139
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFG 126
T I+ +RY + + A+ TF + E G++ ++ S+ L+D LC+ K V A L
Sbjct: 140 KTLAILAERYASNGKPHRAVRTFLSMAEHGIRQDLHSFNTLLDILCKSKRVETAHSLLKT 199
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
T YN++ G+ + +EM +RG+ + +Y+ +
Sbjct: 200 LTSRF-------RPDTVTYNILANGYCLIKRTPMALRVLKEMVQRGIEPTMVTYNTMLKG 252
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+S + +A + Y EMKK+ ++DVV Y TVI GV+ V A RV+ EM + G P+
Sbjct: 253 YFRSNQIKEAWEFYLEMKKRKCEIDVVTYTTVIHGFGVAGDVKKAKRVFHEMVKEGVVPN 312
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKG-CVPDVITYHCFFRCLEKPREI---LGLF 302
V T N +I++LC+ V A V EM ++G CVP+V+TY+ R L ++ LG
Sbjct: 313 VATYNALIQVLCKKDSVENAVVVFEEMAREGVCVPNVVTYNVVIRGLCHVGDMERALGFM 372
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
+RM E G+R + TY +++R F G + V+ KM + C P+ YN L+ A+
Sbjct: 373 ERMGEHGLRACVQTYNVVIRYFCDAGEVEKALEVFGKMGDGSCLPNLDTYNVLISAMF-- 430
Query: 363 GMLDMARKYDEEMFAKG 379
RK E++ G
Sbjct: 431 -----VRKKSEDLVVAG 442
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 113/220 (51%), Gaps = 5/220 (2%)
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
M + G+ +DLHS++ +DI+CKS + A L K + + + D V YN + + +
Sbjct: 164 SMAEHGIRQDLHSFNTLLDILCKSKRVETAHSLLKTLTSR-FRPDTVTYNILANGYCLIK 222
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
A+RV +EM + G +P++VT NT++K + +++EA+ EM K+ C DV+TY
Sbjct: 223 RTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTYT 282
Query: 287 CF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
F ++ +F M++ G+ P + TY L++ + + VV+++M
Sbjct: 283 TVIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEMARE 342
Query: 344 G-CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
G C P+ YN ++ L G ++ A + E M GL A
Sbjct: 343 GVCVPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGLRA 382
>gi|115475660|ref|NP_001061426.1| Os08g0272200 [Oryza sativa Japonica Group]
gi|37806221|dbj|BAC99723.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|37806377|dbj|BAC99889.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623395|dbj|BAF23340.1| Os08g0272200 [Oryza sativa Japonica Group]
gi|125602810|gb|EAZ42135.1| hypothetical protein OsJ_26694 [Oryza sativa Japonica Group]
Length = 528
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 177/348 (50%), Gaps = 12/348 (3%)
Query: 42 GKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-D 100
GK FDL+W ++ RM + I+ +RY A+ VN+A+ TF+ +++F + D
Sbjct: 154 GKARRFDLAWAVVRRMLRR--GVLTSRAMVIVMERYAAANEVNKAIKTFDAMEKFKTEAD 211
Query: 101 EVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFK-MSWWG 159
+ + +L+ ALC+ K++ +A+EL K + + +N+IL GW ++
Sbjct: 212 QTVFYSLLRALCKNKNIEDAEELLLVRKKFFPLTA-------EGFNIILDGWCNVITDIA 264
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+ + W EM + D SY++ + K G + +++Y EMKK+G + YN++I
Sbjct: 265 EAKRIWREMSNYCITPDGTSYTLMVSCFAKVGNLFDTLRVYDEMKKRGWTPSIAVYNSLI 324
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
+ + ++ + + G QP+V T N++I LCE+ ++ EA VL +M KG V
Sbjct: 325 YVLTKENCMKDVQNIFTRIIDEGLQPNVKTYNSMIVPLCESRKLDEARMVLEDMMLKGIV 384
Query: 280 PDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
P ++TYH F R E E L +M + G PK DT++ML+ +F + +W +
Sbjct: 385 PTILTYHTFLR-QENIDETLKFLKKMKDDGCGPKSDTFLMLIDRFFQLNEPGHALKLWNE 443
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREE 387
M+ P Y ++V LI G + A +Y +EM G ++ P+ E
Sbjct: 444 MKRYDIRPSYSHYMSVVQGLIKHGCMQRALEYYDEMKENGFASDPKLE 491
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 192/372 (51%), Gaps = 12/372 (3%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A FF W ++ F H+ +++ +++ILG +F + W+ + M+++ N F ++
Sbjct: 94 AHRFFLWAKSIPGFQHSVMSFHILVEILGSCKQFAILWDFLTEMRESHHYEINSEIFWLI 153
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVG 132
F+ Y A+L + A+ +FN++DEFG+K + + L+ LC+ KHV +AQ+L F + KN
Sbjct: 154 FRAYSQANLPDGAIRSFNRMDEFGVKPTIHDLDKLLFILCKRKHVKQAQQL-FHQAKN-R 211
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
FS K Y++++ GW ++ K + ++ M ++G DL +Y+ + +CK G+
Sbjct: 212 FSL-----TAKTYSILISGWGEIGDSEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGR 266
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
+A ++ +M K ++ D Y+ I + ++ V A RV +MR P+V T N
Sbjct: 267 VDEAKNIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNC 326
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF--FRCLE-KPREILGLFDRMIESG 309
+IK LC+N V EAY +L EM +G PD +Y+ + C + L L RM +
Sbjct: 327 IIKQLCKNEHVEEAYQLLDEMISRGVKPDTWSYNAIQAYHCDHCEVNRALRLMFRMEKDI 386
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI-DKGMLDMA 368
P TY M+L+ R G V VW+ M + P Y+ ++ KG L+ A
Sbjct: 387 CLPDRHTYNMVLKLLIRIGRFDKVTEVWENMVDKKFYPSVSTYSVMIHGFCKKKGKLEEA 446
Query: 369 RKYDEEMFAKGL 380
KY E M +G+
Sbjct: 447 CKYFEMMIDEGI 458
>gi|356540361|ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 190/373 (50%), Gaps = 14/373 (3%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A FF W ++ F H+ +++ +++ILG +F + W+ + M+ + N F ++
Sbjct: 94 AHRFFLWAKSIPGFQHSVMSFHILVEILGSCKQFAILWDFLIEMRGSCHYEINSEIFWLI 153
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNVG 132
F+ Y A+L + A+ +FN++DEFG+K ++ + L+ LC+ KHV +AQ+ F + KN
Sbjct: 154 FRAYSQANLPDGAIRSFNRMDEFGIKPTINDFDKLLFILCKTKHVKQAQQF-FDQAKNRF 212
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
+ K Y++++ GW + K E ++ M ++G DL +Y+ + +CK G
Sbjct: 213 ------LLTAKTYSILISGWGDIGDSEKAHELFQAMLEQGCPVDLLAYNNLLQALCKGGC 266
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
+A ++ +M K ++ D Y+ I + ++ V A+RV +MR P+V T N
Sbjct: 267 VDEAKTIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSALRVLDKMRRYNILPNVFTYNC 326
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF--FRC--LEKPREILGLFDRMIES 308
+IK LC+N V EAY +L EM +G PD +Y+ + C E R I +F RM +
Sbjct: 327 IIKRLCKNEHVEEAYLLLDEMISRGVRPDTWSYNAIQAYHCDHCEVNRAIRLMF-RMEKD 385
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI-DKGMLDM 367
P TY M+L+ R G V VW M + P Y+ ++ KG L+
Sbjct: 386 NCLPDRHTYNMVLKLLIRIGRFDKVTKVWGNMGDKKFYPSVSTYSVMIHGFCKKKGKLEE 445
Query: 368 ARKYDEEMFAKGL 380
A KY E M +G+
Sbjct: 446 ACKYFEMMIDEGI 458
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 107/315 (33%), Gaps = 82/315 (26%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
YN+++ L K D + + H M P+ T+ I Y A V A+ +K
Sbjct: 253 AYNNLLQALCKGGCVDEAKTIFHDMLSKRVE-PDAFTYSIFIHSYCDADDVQSALRVLDK 311
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + + V +Y ++ LC+ +HV EA L
Sbjct: 312 MRRYNILPNVFTYNCIIKRLCKNEHVEEAYLL---------------------------- 343
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+EM RGV D SY+ C + +A++L M+K
Sbjct: 344 -------------LDEMISRGVRPDTWSYNAIQAYHCDHCEVNRAIRLMFRMEKD----- 385
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
C P T N V+KLL GR + V
Sbjct: 386 ------------------------------NCLPDRHTYNMVLKLLIRIGRFDKVTKVWG 415
Query: 272 EMPKKGCVPDVITY----HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
M K P V TY H F + K E F+ MI+ GI P + T ML +
Sbjct: 416 NMGDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVEMLRNQLLGL 475
Query: 328 GFLRPVFVVWKKMEE 342
GFL + ++ KM +
Sbjct: 476 GFLDHIEILAAKMRQ 490
>gi|11079489|gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
Length = 481
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 188/384 (48%), Gaps = 16/384 (4%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+ L+ + N FF W E H+ H+ Y+ +I+ K ++ L W+LI+ M+
Sbjct: 69 DVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKK- 127
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEA 120
+ N TF I+ ++Y A V+EA+ FN ++++ L V++ L+ ALC+ K+V +A
Sbjct: 128 -KMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKA 186
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
QE+ EN F+ +K Y+++L GW K K RE + EM G D+ +Y
Sbjct: 187 QEV--FENMRDRFTP-----DSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTY 239
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
SI +DI+CK+G+ +A+ + + M K Y+ ++ G ++ A+ + EM
Sbjct: 240 SIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMER 299
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL----EKPR 296
G + V N++I C+ R++ Y VL EM KG P+ + + R L EK
Sbjct: 300 SGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKD- 358
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
E +F +MI+ P DTY M+++ F + VWK M + G P ++ L+
Sbjct: 359 EAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLI 417
Query: 357 DALIDKGMLDMARKYDEEMFAKGL 380
+ L ++ A EEM G+
Sbjct: 418 NGLCEERTTQKACVLLEEMIEMGI 441
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 113/249 (45%), Gaps = 5/249 (2%)
Query: 140 NKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKL 199
+ + Y+M++ K+ + + M K+ ++ ++ ++ I M ++ K +A+
Sbjct: 96 HSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKYARAQKVDEAIYA 154
Query: 200 YKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCE 259
+ M+K + ++VA+N ++ A+ S+ V A V+ MR+ P T + +++ +
Sbjct: 155 FNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRD-RFTPDSKTYSILLEGWGK 213
Query: 260 NGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDT 316
+ +A V EM GC PD++TY L K E LG+ M S +P
Sbjct: 214 EPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFI 273
Query: 317 YVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
Y +L+ +G L + +ME G D +N+L+ A + + +EM
Sbjct: 274 YSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMK 333
Query: 377 AKGLSAKPR 385
+KG++ +
Sbjct: 334 SKGVTPNSK 342
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 114/247 (46%), Gaps = 11/247 (4%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKR 76
F ++ CH TY+ ++DIL K D + ++ M D P + ++
Sbjct: 224 FREMIDAGCH--PDIVTYSIMVDILCKAGRVDEALGIVRSM-DPSICKPTTFIYSVLVHT 280
Query: 77 YVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSG 135
Y T + + EA+ TF +++ G+K +V+ N L+ A C+ + + E K+ G +
Sbjct: 281 YGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRV-LKEMKSKGVTP 339
Query: 136 LVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK 195
+K N+ILR + + + + +M K D +Y++ + + C+ +
Sbjct: 340 -----NSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKKEMET 393
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A K++K M+KKG+ + ++ +I + A + EM EMG +PS VT + +
Sbjct: 394 ADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQ 453
Query: 256 LLCENGR 262
LL + R
Sbjct: 454 LLIKEER 460
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 124/281 (44%), Gaps = 11/281 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + + ++A E F + FT + TY+ +++ GK + + M D P
Sbjct: 178 CKSKNVRKAQEVFENMRD--RFTPDSKTYSILLEGWGKEPNLPKAREVFREMID-AGCHP 234
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELC 124
+ T+ IM A V+EA+G +D K Y LV + EA +
Sbjct: 235 DIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVD-T 293
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F E + G V ++N ++ + K + +EM +GV + S +I +
Sbjct: 294 FLEMERSGMKADV-----AVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIIL 348
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ + G+ +A ++++M K + D Y VI+ + ++ A +V++ MR+ G
Sbjct: 349 RHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVF 407
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
PS+ T + +I LCE ++A +L EM + G P +T+
Sbjct: 408 PSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTF 448
>gi|334183972|ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g77360, mitochondrial; Flags: Precursor
gi|332197848|gb|AEE35969.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 188/384 (48%), Gaps = 16/384 (4%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+ L+ + N FF W E H+ H+ Y+ +I+ K ++ L W+LI+ M+
Sbjct: 105 DVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKK- 163
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEA 120
+ N TF I+ ++Y A V+EA+ FN ++++ L V++ L+ ALC+ K+V +A
Sbjct: 164 -KMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKA 222
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
QE+ EN F+ +K Y+++L GW K K RE + EM G D+ +Y
Sbjct: 223 QEV--FENMRDRFTP-----DSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTY 275
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
SI +DI+CK+G+ +A+ + + M K Y+ ++ G ++ A+ + EM
Sbjct: 276 SIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMER 335
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL----EKPR 296
G + V N++I C+ R++ Y VL EM KG P+ + + R L EK
Sbjct: 336 SGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKD- 394
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
E +F +MI+ P DTY M+++ F + VWK M + G P ++ L+
Sbjct: 395 EAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLI 453
Query: 357 DALIDKGMLDMARKYDEEMFAKGL 380
+ L ++ A EEM G+
Sbjct: 454 NGLCEERTTQKACVLLEEMIEMGI 477
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 113/249 (45%), Gaps = 5/249 (2%)
Query: 140 NKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKL 199
+ + Y+M++ K+ + + M K+ ++ ++ ++ I M ++ K +A+
Sbjct: 132 HSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKYARAQKVDEAIYA 190
Query: 200 YKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCE 259
+ M+K + ++VA+N ++ A+ S+ V A V+ MR+ P T + +++ +
Sbjct: 191 FNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRD-RFTPDSKTYSILLEGWGK 249
Query: 260 NGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDT 316
+ +A V EM GC PD++TY L K E LG+ M S +P
Sbjct: 250 EPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFI 309
Query: 317 YVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
Y +L+ +G L + +ME G D +N+L+ A + + +EM
Sbjct: 310 YSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMK 369
Query: 377 AKGLSAKPR 385
+KG++ +
Sbjct: 370 SKGVTPNSK 378
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 114/247 (46%), Gaps = 11/247 (4%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKR 76
F ++ CH TY+ ++DIL K D + ++ M D P + ++
Sbjct: 260 FREMIDAGCH--PDIVTYSIMVDILCKAGRVDEALGIVRSM-DPSICKPTTFIYSVLVHT 316
Query: 77 YVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSG 135
Y T + + EA+ TF +++ G+K +V+ N L+ A C+ + + E K+ G +
Sbjct: 317 YGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRV-LKEMKSKGVTP 375
Query: 136 LVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK 195
+K N+ILR + + + + +M K D +Y++ + + C+ +
Sbjct: 376 -----NSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKKEMET 429
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A K++K M+KKG+ + ++ +I + A + EM EMG +PS VT + +
Sbjct: 430 ADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQ 489
Query: 256 LLCENGR 262
LL + R
Sbjct: 490 LLIKEER 496
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 124/281 (44%), Gaps = 11/281 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + + ++A E F + FT + TY+ +++ GK + + M D P
Sbjct: 214 CKSKNVRKAQEVFENMRD--RFTPDSKTYSILLEGWGKEPNLPKAREVFREMID-AGCHP 270
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELC 124
+ T+ IM A V+EA+G +D K Y LV + EA +
Sbjct: 271 DIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVD-T 329
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F E + G V ++N ++ + K + +EM +GV + S +I +
Sbjct: 330 FLEMERSGMKADV-----AVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIIL 384
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ + G+ +A ++++M K + D Y VI+ + ++ A +V++ MR+ G
Sbjct: 385 RHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVF 443
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
PS+ T + +I LCE ++A +L EM + G P +T+
Sbjct: 444 PSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTF 484
>gi|224081016|ref|XP_002306265.1| predicted protein [Populus trichocarpa]
gi|222855714|gb|EEE93261.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 187/364 (51%), Gaps = 24/364 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN +IDIL K +FD+ W LI M D + P TF ++ +R V A L +A+ F+
Sbjct: 142 TYNLMIDILAKVRQFDVCWQLIVEM-DQRNVKPTSETFFVLIRRLVAAGLTRQAIRAFDD 200
Query: 93 LDEFGLK--DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
++ F + +E +C L+D LC+Y +V E+ F + K+ FS V+M Y +++
Sbjct: 201 MESFVSEPVNETHFCFLLDTLCKYGYVKVGVEI-FNKRKH-RFSPNVKM-----YTVLIY 253
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK--SGKPWK--------AVKLY 200
GW K+ F +E +RG+ + +Y++ ++ +C+ S P A L+
Sbjct: 254 GWCKIGRIDMAERFLKETGERGIEATVVTYNVLLNGICRRASLHPESRFERTITLAENLF 313
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
EM+++GI+ DV +++ V+ + + + + M+E G PSVVT +V+K LC
Sbjct: 314 DEMRERGIEPDVTSFSIVLHVYSRAHKPELTLDKLKLMKEKGICPSVVTYTSVVKCLCSC 373
Query: 261 GRVREAYAVLAEMPKKGCVPDVITYHCFFR---CLEKPREILGLFDRMIESGIRP-KMDT 316
GR+ +A +L EM + G +TY+CFF+ + L L+ +M E G+ + +
Sbjct: 374 GRIEDAEELLGEMVRNGVSRTAVTYNCFFKEYMGRKDAESALKLYKKMREDGLGSLGLHS 433
Query: 317 YVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
Y +LLR F L V +W+ ++ G PD +Y L+ L +K A K+ EM
Sbjct: 434 YNILLRMFMMLNRLDIVNEIWEDLKSSGLGPDLDSYTMLIHGLCEKEKWREACKFFVEMI 493
Query: 377 AKGL 380
KGL
Sbjct: 494 EKGL 497
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 99/220 (45%), Gaps = 11/220 (5%)
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGF 133
F+R +T A F+++ E G++ +V+ ++V + H EL + K +
Sbjct: 302 FERTITL-----AENLFDEMRERGIEPDVTSFSIVLHVYSRAH---KPELTLDKLKLMKE 353
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
G+ T Y +++ E EM + GV + +Y+ +
Sbjct: 354 KGICPSVVT--YTSVVKCLCSCGRIEDAEELLGEMVRNGVSRTAVTYNCFFKEYMGRKDA 411
Query: 194 WKAVKLYKEMKKKGI-KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
A+KLYK+M++ G+ + + +YN ++R + +D ++ +++ G P + +
Sbjct: 412 ESALKLYKKMREDGLGSLGLHSYNILLRMFMMLNRLDIVNEIWEDLKSSGLGPDLDSYTM 471
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
+I LCE + REA EM +KG +P +T+ ++ L
Sbjct: 472 LIHGLCEKEKWREACKFFVEMIEKGLLPQKVTFETLYKGL 511
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 108/256 (42%), Gaps = 25/256 (9%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN+++ K+ + C + EMD+R V ++ + + + +G +A++ + +M+
Sbjct: 143 YNLMIDILAKVRQFDVCWQLIVEMDQRNVKPTSETFFVLIRRLVAAGLTRQAIRAFDDME 202
Query: 205 K---KGIKMDVVAY--NTVIRAVGVSEGVD-FAMRVYREMREMGCQPSVVTCNTVIKLLC 258
+ + + +T+ + V GV+ F R +R P+V +I C
Sbjct: 203 SFVSEPVNETHFCFLLDTLCKYGYVKVGVEIFNKRKHR------FSPNVKMYTVLIYGWC 256
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCFF-----RCLEKP-----REIL---GLFDRM 305
+ GR+ A L E ++G V+TY+ R P R I LFD M
Sbjct: 257 KIGRIDMAERFLKETGERGIEATVVTYNVLLNGICRRASLHPESRFERTITLAENLFDEM 316
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
E GI P + ++ ++L + R K M+E G P Y ++V L G +
Sbjct: 317 RERGIEPDVTSFSIVLHVYSRAHKPELTLDKLKLMKEKGICPSVVTYTSVVKCLCSCGRI 376
Query: 366 DMARKYDEEMFAKGLS 381
+ A + EM G+S
Sbjct: 377 EDAEELLGEMVRNGVS 392
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 90/223 (40%), Gaps = 17/223 (7%)
Query: 174 VKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMR 233
V + H + +D +CK G V+++ + K + +V Y +I +D A R
Sbjct: 209 VNETH-FCFLLDTLCKYGYVKVGVEIFNKRKHR-FSPNVKMYTVLIYGWCKIGRIDMAER 266
Query: 234 VYREMREMGCQPSVVTCNTVIKLLCENGRVRE----------AYAVLAEMPKKGCVPDVI 283
+E E G + +VVT N ++ +C + A + EM ++G PDV
Sbjct: 267 FLKETGERGIEATVVTYNVLLNGICRRASLHPESRFERTITLAENLFDEMRERGIEPDVT 326
Query: 284 TY----HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
++ H + R KP L M E GI P + TY +++ G + + +
Sbjct: 327 SFSIVLHVYSRA-HKPELTLDKLKLMKEKGICPSVVTYTSVVKCLCSCGRIEDAEELLGE 385
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
M G S YN + + + A K ++M GL +
Sbjct: 386 MVRNGVSRTAVTYNCFFKEYMGRKDAESALKLYKKMREDGLGS 428
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 94/225 (41%), Gaps = 40/225 (17%)
Query: 49 LSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNL 107
L+ NL M++ P+ +F I+ Y AH + + E G+ V+Y ++
Sbjct: 308 LAENLFDEMRERGIE-PDVTSFSIVLHVYSRAHKPELTLDKLKLMKEKGICPSVVTYTSV 366
Query: 108 VDALCEYKHVIEAQELCFGENKNVGFS--------------------------------G 135
V LC + +A+EL GE G S G
Sbjct: 367 VKCLCSCGRIEDAEEL-LGEMVRNGVSRTAVTYNCFFKEYMGRKDAESALKLYKKMREDG 425
Query: 136 LVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK 195
L + YN++LR + ++ E WE++ G+ DL SY++ + +C+ K +
Sbjct: 426 LGSLG-LHSYNILLRMFMMLNRLDIVNEIWEDLKSSGLGPDLDSYTMLIHGLCEKEKWRE 484
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
A K + EM +KG+ V + T+ + + S+ +R +R +++
Sbjct: 485 ACKFFVEMIEKGLLPQKVTFETLYKGLIQSD----MLRTWRRLKK 525
>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 482
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 194/398 (48%), Gaps = 21/398 (5%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
N +AL FF + + H +++ IDI + +F W L+ RM+ P+
Sbjct: 70 NHGPKALHFFKILSHHPSYCHQASSFDHAIDICARLRDFRTLWFLVSRMRSCRLG-PSPR 128
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGE 127
TF I+ +RY + A+ F + E+G +D S+ ++D LC+ K V A L
Sbjct: 129 TFAIIAERYAAMGKPHRAVTVFMSMHEYGCFQDLSSFNTILDVLCKSKRVEMAYNL---- 184
Query: 128 NKNVGFSGLVEMNKTKI--YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
F L K YN+I+ GW + K E +EM +RG+ +L +Y+I ++
Sbjct: 185 -----FKALKGKFKADCVSYNIIVNGWCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLN 239
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
++G+ +A + EMKK+ +DVV Y +VI +GV + A V+ +M + G P
Sbjct: 240 GYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLP 299
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLF 302
SV T N +I++LC+ V A + EM K+G VP+ ITY+ R L E+ + L
Sbjct: 300 SVATFNALIQILCKKDSVENAILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELM 359
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI-- 360
+RM + P + TY +L+R F G + +++KM C P+ YN L++++
Sbjct: 360 ERMEDDDCEPNVQTYNILIRYFCDAGEIEKGLDLFQKMGNGDCLPNLDTYNILINSMFVR 419
Query: 361 -DKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGL 397
+ L +A K EM +G PR+ +++ G L
Sbjct: 420 KNSDNLLVAGKLLVEMVDRGF--LPRKLTFNRVLDGLL 455
>gi|356557209|ref|XP_003546910.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g80880, mitochondrial-like [Glycine max]
Length = 504
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 188/381 (49%), Gaps = 22/381 (5%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
+WK AL F W CH + N +I +L +F +W +I M + SS+
Sbjct: 105 EWKPALLAFKW---SCH-GNDEKVCNLMIWVLATHGKFSTAWCIIRDM--HRSSLSTRQA 158
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLK---DEVSYCNLVDALCEYKHVIEAQELCFG 126
IM RY +A+ +A+ TFN +D+ + D+ S+ L+ ALC+Y++V E +E
Sbjct: 159 MLIMIDRYASANNSAKAIQTFNFMDKSDFRLTPDQESFHALLTALCKYRNVEEDEEFMLV 218
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSW-WGKCREFWEEMDKRGVVKDLHSYSIYMD 185
K L ++ T+ +N+IL GW ++ + + W EM K + D SYS +
Sbjct: 219 NKK------LFHLD-TEGFNIILNGWCNITKDIYEAKRVWREMSKYCITPDATSYSYMIS 271
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
K G + +++LY +MKK+G + YN+++ + + A+R +++E G QP
Sbjct: 272 CFSKEGNLFDSLRLYDQMKKRGWIPGIEIYNSLVYVLTHENCLKEALRTIDKLKEQGLQP 331
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRM 305
VT N++I LCE G++ EA + M ++ P TYH FF + + L RM
Sbjct: 332 GSVTFNSMILSLCEAGKLAEARIIFNSMVEENVSPTTETYHAFFEGTDY-QGTLEFLTRM 390
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFV--VWKKMEELGCSPDEFAYNALVDALIDKG 363
+SG+ P D++V++L KF + +PV W +M+ P Y +V+ L+
Sbjct: 391 KDSGLGPSKDSFVIILAKFLK--LKQPVNAPKFWTEMKTYDVLPSCVHYRIMVEGLVTCR 448
Query: 364 MLDMARKYDEEMFAKGLSAKP 384
AR + EEM + G SA P
Sbjct: 449 WFIKARGFYEEMISNGCSADP 469
>gi|15223927|ref|NP_177262.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169669|sp|Q9C9A2.1|PP112_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g71060, mitochondrial; Flags: Precursor
gi|12323433|gb|AAG51696.1|AC016972_15 hypothetical protein; 31939-30407 [Arabidopsis thaliana]
gi|332197036|gb|AEE35157.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 510
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 198/402 (49%), Gaps = 19/402 (4%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E L +N AL F W E F HTT YN++I+ LGK +F L W+L+ MK
Sbjct: 99 EVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMK--A 156
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
+ + TF ++ +RY A V EA+G F+K++EFG K E S N ++D L + ++V +A
Sbjct: 157 KKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDA 216
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
Q++ F + K F + K Y ++L GW + + E EM G D+ +Y
Sbjct: 217 QKV-FDKMKKKRFEPDI-----KSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAY 270
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
I ++ CK+ K +A++ + EM+++ K + ++I +G + ++ A+ + +
Sbjct: 271 GIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKS 330
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY----HCFFRCLEKPR 296
G T N ++ C + R+ +AY + EM KG P+ TY H R +++ +
Sbjct: 331 SGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIR-MQRSK 389
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
E ++ M P + TY +++R F L +W +M+ G P +++L+
Sbjct: 390 EAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLI 446
Query: 357 DALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLD 398
AL + LD A +Y EM G+ +P + ++L Q LD
Sbjct: 447 TALCHENKLDEACEYFNEMLDVGI--RPPGHMFSRLKQTLLD 486
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 104/242 (42%), Gaps = 35/242 (14%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQEL 123
P+ + I+ + A EA+ FN++++ K +C+L++ L K + +A E
Sbjct: 265 PDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEF 324
Query: 124 CFGENKNVGF-------SGLV-----------------EMN------KTKIYNMILRGWF 153
F +K+ GF + LV EM + Y++IL
Sbjct: 325 -FERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLI 383
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
+M + E ++ M V +Y I + + C + A+K++ EMK KG+ +
Sbjct: 384 RMQRSKEAYEVYQTMSCEPTVS---TYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMH 440
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
++++I A+ +D A + EM ++G +P + + + L + GR + ++ +M
Sbjct: 441 MFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKM 500
Query: 274 PK 275
+
Sbjct: 501 DR 502
>gi|449457341|ref|XP_004146407.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
gi|449523938|ref|XP_004168980.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 201/397 (50%), Gaps = 34/397 (8%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+TL + K AL FF++ + +T +YN ++DIL K +FD +W+LI +M
Sbjct: 73 QTLLRLTHHSKIALSFFDYANSLPSNPISTTSYNILLDILAKVRQFDAAWHLILQMDHKG 132
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLD-----EFGLKDEVSYCNLVDALCEYKH 116
+ TF ++ +R +++ +A+ F+ ++ + G+ D +C L+D LC+Y +
Sbjct: 133 TD-----TFLLLIRRLISSGRTRQAIRAFDDIEGLTGNKVGIDD---FCYLLDVLCKYGY 184
Query: 117 VIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
V A E+ + G KIY +++ GW K+ + F ++M +RG+ +
Sbjct: 185 VKVAVEVFNKRKEEFGVD-------VKIYTILIYGWCKIGRFEMAERFLKDMVERGIEPN 237
Query: 177 LHSYSIYMDIMCK------SGKPWKAV----KLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
+ +Y++ ++ +C+ G+ K + K++ EM+K+GI+ DV +++ V+ +
Sbjct: 238 VVTYNVLLNGVCRRASLHPEGRFEKTIRHAEKVFDEMRKRGIEPDVTSFSIVLHVYSRAH 297
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
+ ++ ++M+E+G P+V T +VIK LC GR+ + ++ EM + G P TY+
Sbjct: 298 KPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDGENLIEEMVRSGISPSPTTYN 357
Query: 287 CFFRCLEKPRE---ILGLFDRMIESGI-RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE 342
CFF+ ++ L L+ +M E + P + TY +LL F + +W M+E
Sbjct: 358 CFFKEYRGRKDGAGALRLYKKMREDCLCAPSLHTYNILLALFLNLDKKETLKELWNDMKE 417
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
G PD +Y ++ L +K A ++ EM +G
Sbjct: 418 SGVGPDLDSYTTIIHGLCEKQRWSEACQFFVEMIERG 454
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 88/201 (43%), Gaps = 23/201 (11%)
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D++CK G AV+++ + +K+ +DV Y +I + A R ++M E G
Sbjct: 176 LDVLCKYGYVKVAVEVFNK-RKEEFGVDVKIYTILIYGWCKIGRFEMAERFLKDMVERGI 234
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFD 303
+P+VVT N ++ NG R A + H R + R +FD
Sbjct: 235 EPNVVTYNVLL-----NGVCRRA-----------------SLHPEGRFEKTIRHAEKVFD 272
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
M + GI P + ++ ++L + R K+M+ELG SP Y +++ L G
Sbjct: 273 EMRKRGIEPDVTSFSIVLHVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCG 332
Query: 364 MLDMARKYDEEMFAKGLSAKP 384
L+ EEM G+S P
Sbjct: 333 RLEDGENLIEEMVRSGISPSP 353
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 88/202 (43%), Gaps = 8/202 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
P+ +F I+ Y AH ++ ++ E G+ V +Y +++ LC + + + L
Sbjct: 281 PDVTSFSIVLHVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDGENL 340
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWF-KMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ + SG+ T YN + + + G R + + + LH+Y+I
Sbjct: 341 I----EEMVRSGISPSPTT--YNCFFKEYRGRKDGAGALRLYKKMREDCLCAPSLHTYNI 394
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ + K +L+ +MK+ G+ D+ +Y T+I + + A + + EM E G
Sbjct: 395 LLALFLNLDKKETLKELWNDMKESGVGPDLDSYTTIIHGLCEKQRWSEACQFFVEMIERG 454
Query: 243 CQPSVVTCNTVIKLLCENGRVR 264
P VT + + L ++ +R
Sbjct: 455 FLPQKVTFEMLYRGLIQSDMLR 476
>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 549
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 193/390 (49%), Gaps = 16/390 (4%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+ L+ + NDW AL F W + + H D Y+ ++DILG+ +F W L+ M +N
Sbjct: 136 QLLNRFCNDWVPALGLFTWAKHQTGYVHPPDLYDLMVDILGRRKKFSFMWELVKEM-ENL 194
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
+ T + + +R A +A+ F +++ G++ ++ N L+DAL + V A
Sbjct: 195 EGYVSLVTMKKVMRRLARAGNFQDAVEAFRGIEKLGVRKDIEALNVLMDALVKEGSVEHA 254
Query: 121 QE--LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
+ F ++ +V F +N++L G+ K R+ +EMDK+G ++
Sbjct: 255 YSAFMEFKDSIHVDFQS---------FNILLHGYCKARKLDDARKIMDEMDKQGFQPNVV 305
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
SY+ ++++ CK ++ EM++K K +V+ Y + A+G ++ V+ A+ VY M
Sbjct: 306 SYTCFIELYCKLKDFRNVEAIFSEMQEKSCKPNVITYTIFMHALGKAKQVNKALEVYEMM 365
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPR 296
+ C P +++I +L ++GR+++A+ V +M K+G PD++TY+ C
Sbjct: 366 KSNCCVPDASFYSSLIFVLTQSGRLKDAWDVFEDMKKQGVSPDLLTYNTMITSACTHLEE 425
Query: 297 E-ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
E L L RM E +P + TY LL+ R ++ + + M + S D Y L
Sbjct: 426 ENALKLLRRMEEDSCKPDIQTYAPLLKMCCRKKRIKVLKFLLNHMFKNNISIDLGTYVLL 485
Query: 356 VDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
V L G L++A + EEM KGL + R
Sbjct: 486 VGGLCKSGKLELACSFFEEMVMKGLIPRDR 515
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 143/324 (44%), Gaps = 19/324 (5%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A +++ A+E F +E + N ++D L K + +++ KD S +
Sbjct: 213 AGNFQDAVEAFRGIEK-LGVRKDIEALNVLMDALVKEGSVEHAYSAFMEFKD--SIHVDF 269
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFG 126
+F I+ Y A +++A +++D+ G + V SY ++ C+ K
Sbjct: 270 QSFNILLHGYCKARKLDDARKIMDEMDKQGFQPNVVSYTCFIELYCKLKDF--------- 320
Query: 127 ENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
N FS + E + Y + + K K E +E M V D YS
Sbjct: 321 RNVEAIFSEMQEKSCKPNVITYTIFMHALGKAKQVNKALEVYEMMKSNCCVPDASFYSSL 380
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ ++ +SG+ A ++++MKK+G+ D++ YNT+I + + A+++ R M E C
Sbjct: 381 IFVLTQSGRLKDAWDVFEDMKKQGVSPDLLTYNTMITSACTHLEEENALKLLRRMEEDSC 440
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LG 300
+P + T ++K+ C R++ +L M K D+ TY L K ++
Sbjct: 441 KPDIQTYAPLLKMCCRKKRIKVLKFLLNHMFKNNISIDLGTYVLLVGGLCKSGKLELACS 500
Query: 301 LFDRMIESGIRPKMDTYVMLLRKF 324
F+ M+ G+ P+ TY ML+ +
Sbjct: 501 FFEEMVMKGLIPRDRTYKMLVEEL 524
>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 173/340 (50%), Gaps = 12/340 (3%)
Query: 46 EFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYC 105
+F L W+ + M++ F ++F+ Y A+L +A+ F+++ +FG+K V
Sbjct: 102 QFPLIWDFLSDMRETRCCEICPEIFWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDV 161
Query: 106 N-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREF 164
+ L+ LC+ KHV +AQE F + NV M K Y++++RGW + + R+
Sbjct: 162 DQLLYVLCKRKHVKQAQE--FFDKVNVEV-----MPNAKTYSILMRGWGDVGDSSEARKL 214
Query: 165 WEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGV 224
+EEM +RG D+ +Y+ ++ +CK G +A KL++EM G+ D +Y+ IRA
Sbjct: 215 FEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCE 274
Query: 225 SEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
+ A +V MR P+V T N ++K LC++ +V EAY +L EM ++G PD+ +
Sbjct: 275 VNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWS 334
Query: 285 YHCF--FRCLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKME 341
Y+ F C + + L L RM + P TY M+L+ R G V VW ME
Sbjct: 335 YNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGME 394
Query: 342 ELGCSPDEFAYNALVDALI-DKGMLDMARKYDEEMFAKGL 380
E G P Y +V KG L+ A KY E M G+
Sbjct: 395 ERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGI 434
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 88/197 (44%), Gaps = 4/197 (2%)
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
C++ P A++ + +M G+K V + ++ + + V A + ++ + P+
Sbjct: 134 CRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKV-NVEVMPNA 192
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDR 304
T + +++ + G EA + EM ++GC DV+ Y+ L K E LF
Sbjct: 193 KTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFRE 252
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
M +G+ P +Y + +R + + F V +M P+ F YN +V L
Sbjct: 253 MGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEK 312
Query: 365 LDMARKYDEEMFAKGLS 381
+D A + +EM +G+S
Sbjct: 313 VDEAYQLLDEMIERGVS 329
>gi|297841875|ref|XP_002888819.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334660|gb|EFH65078.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 512
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 199/402 (49%), Gaps = 19/402 (4%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E L +N AL F W E F HTT YN++I+ LGK +F L WNL+ MK
Sbjct: 101 EVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWNLVDDMKQK- 159
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
+ + TF ++ +RY A V EA+ F+K++++G K E S N ++D L + ++V +A
Sbjct: 160 -KLLSKDTFALISRRYARARKVKEAITAFHKMEDYGFKMESSDFNRMLDILSKSRNVGDA 218
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
Q++ F + K F + K Y ++L GW + + E + EM G D+ +Y
Sbjct: 219 QKV-FDKMKKKRFEPDI-----KSYTILLEGWGQELNLLRVNEVYGEMKDEGFEPDVVAY 272
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
I ++ CK+ K +AV+ + EM+++ K + ++I +G + ++ A+ + +
Sbjct: 273 GIIINAYCKAKKYDEAVRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKS 332
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY----HCFFRCLEKPR 296
G T N ++ C + R+ +A+ + EM KG P+ TY H R +++ +
Sbjct: 333 SGFPLEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKGIGPNARTYDIILHHLIR-MQRTK 391
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
E ++ +M P + TY +++R F L +W +M+ G P +++L+
Sbjct: 392 EAYEVYQKM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLI 448
Query: 357 DALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLD 398
AL + LD A +Y EM G+ +P L ++L Q LD
Sbjct: 449 TALCHENKLDEACEYFNEMLDVGI--RPPGHLFSRLKQTLLD 488
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 96/228 (42%), Gaps = 33/228 (14%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQEL 123
P+ + I+ Y A +EA+ FN++++ K +C+L++ L K + +A E
Sbjct: 267 PDVVAYGIIINAYCKAKKYDEAVRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEF 326
Query: 124 -----------------------CFGENKNVGFSGLVEMNKTKI------YNMILRGWFK 154
C+ + F + EM I Y++IL +
Sbjct: 327 FERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKGIGPNARTYDIILHHLIR 386
Query: 155 MSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVA 214
M + +E +E K + +Y I + + C + A+K++ EMK KG+ +
Sbjct: 387 MQ---RTKEAYEVYQKMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHM 443
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
++++I A+ +D A + EM ++G +P + + + L + GR
Sbjct: 444 FSSLITALCHENKLDEACEYFNEMLDVGIRPPGHLFSRLKQTLLDEGR 491
>gi|326517954|dbj|BAK07229.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 549
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 183/381 (48%), Gaps = 12/381 (3%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+ +DW A FF W + H+ D+YNS++DILGKF +FDL W LI +M D + +
Sbjct: 136 FGSDWVAAFGFFMWAGAQEGYRHSADSYNSMVDILGKFKQFDLMWGLISQM-DEIGGLVS 194
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCF 125
AT + +R A +A+ FNK+D+FG+ KD + L+D LC+ + V A+ F
Sbjct: 195 LATMTKVMRRLAGASRWTDAIDAFNKMDQFGVVKDTTAMNVLLDTLCKERSVKRARG-AF 253
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
E G V +++ +N ++ GW K + R+ +EM++ G + +Y+ ++
Sbjct: 254 QE-----LRGSVPPDESS-FNTLVHGWCKARMMNEARDMMKEMEEHGFKPSVITYTSLIE 307
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
C + EM+ KG +V+ Y V+ A+G + A+ ++ ++R GC P
Sbjct: 308 AYCMEKDFQTVYAILNEMRSKGCPPNVITYTIVMHALGKAGRTQEALDIFDKVRGDGCAP 367
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLF 302
N++I +L GR+ +A +V+ +M G P V T++ + L +
Sbjct: 368 DASFYNSLIYILGRAGRLEDANSVVDKMRMTGVRPTVATFNTLISAACDHSQAENALKML 427
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
+M E +P + TY LL+ + +++ + + M +PD Y LV L
Sbjct: 428 VKMEEQSCKPDIKTYTPLLKLCCKRQWIKVLRFLICHMFRKDITPDFSTYTLLVTWLCRN 487
Query: 363 GMLDMARKYDEEMFAKGLSAK 383
G + + EEM KG + K
Sbjct: 488 GKPAQSCLFLEEMVLKGFAPK 508
>gi|356540343|ref|XP_003538649.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 543
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 192/387 (49%), Gaps = 11/387 (2%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+ L+ ++NDW AL FF W ++ + H+ + N ++DILGK FD +L+ M
Sbjct: 129 QVLNRFSNDWVPALGFFKWAKSQTGYRHSPELCNLMVDILGKCKSFDPMSDLVEEMAKLE 188
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
T + +R A +A+ F ++D+FG+ + + N L+DAL + V A
Sbjct: 189 QGYVTLETMAKVIRRLAKARKHEDAIEAFRRMDKFGVNKDTAALNVLIDALVKGDSVEHA 248
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
++ + F GL+ ++ + +N+++ GW + + R+ E+M + G D+ SY
Sbjct: 249 HKVV------LEFKGLIPLS-SHSFNVLMHGWCRARKFDNARKAMEDMKELGFEPDVFSY 301
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ +++ C K ++ +EM++ G + V Y TV+ +G + + A+ VY +M+
Sbjct: 302 TSFIEAYCHERDFRKVDQVLEEMRENGCPPNAVTYTTVMLHLGKAGQLSKALEVYEKMKC 361
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPREI 298
GC + +I +L + GR+++A V +MPK+G V DV+TY+ C E
Sbjct: 362 DGCVADTPVYSCMIFILGKAGRLKDACDVFEDMPKQGVVRDVVTYNTMISTACAHSREET 421
Query: 299 -LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
L L M + +P + TY LL+ + ++ + + M + SPD Y+ LV+
Sbjct: 422 ALRLLKEMEDGSCKPNVGTYHPLLKMCCKKKRMKVLKFLLDHMFKNDISPDLATYSLLVN 481
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKP 384
AL G + A + EEM KG + KP
Sbjct: 482 ALCKTGKVADAYSFLEEMVLKGFTPKP 508
>gi|313851107|ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays]
gi|312064725|gb|ADQ27447.1| pentatricopeptide repeat protein [Zea mays]
gi|414872960|tpg|DAA51517.1| TPA: hypothetical protein ZEAMMB73_325693 [Zea mays]
Length = 489
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 184/373 (49%), Gaps = 16/373 (4%)
Query: 14 ALEFFNWVETDCH--FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
A FF W HT +Y++V+ L K ++ L W+++ M+ + N TF
Sbjct: 87 AYRFFEWARKQKRGVCAHTVRSYHTVVTSLAKIRQYQLMWDVVAIMRKE--GVANVETFG 144
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKN 130
I+ ++Y A ++EA+ TFN ++++G+ ++ N L+ ALC+ K+V +AQE+ + N
Sbjct: 145 IIMRKYARAQKLDEAVYTFNVMEKYGVAHNLAAFNSLLSALCKSKNVRKAQEIF--DKMN 202
Query: 131 VGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS 190
FS K Y+++L GW + K RE + +M G D+ +Y I +D +CK+
Sbjct: 203 NRFS-----PDAKTYSILLEGWGRAPSLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKT 257
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTC 250
G+ +AV + ++M +G + Y+ ++ GV ++ A+ + +M + G P VV
Sbjct: 258 GRVEEAVCVVQDMSSRGCQPTTFIYSILVHTYGVDMRIEDAVAAFLDMEKDGIMPDVVVY 317
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC---LEKPREILGLFDRMIE 307
N +I C+ + A+ V+ +M G P+ T++ L K E +F MI+
Sbjct: 318 NALITAFCKVKKFENAFRVMDDMQGHGISPNSRTWNIILNTLISLGKDDEAYRVFRSMIK 377
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
+P DTY M+++ F + VWK M P ++ L++ L DKG +
Sbjct: 378 R-CKPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQ 436
Query: 368 ARKYDEEMFAKGL 380
A E+M KG+
Sbjct: 437 ACVLLEDMIEKGI 449
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 98/241 (40%), Gaps = 33/241 (13%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+ +I+R + + + + M+K GV +L +++ + +CKS KA +++ +M
Sbjct: 143 FGIIMRKYARAQKLDEAVYTFNVMEKYGVAHNLAAFNSLLSALCKSKNVRKAQEIFDKMN 202
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+ D Y+ ++ G + + VY +M GCQP +VT ++ LC+ GRV
Sbjct: 203 NR-FSPDAKTYSILLEGWGRAPSLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVE 261
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
EA V+ +M +GC P Y D IE + +D
Sbjct: 262 EAVCVVQDMSSRGCQPTTFIYSILVHTYG--------VDMRIEDAVAAFLD--------- 304
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
ME+ G PD YNAL+ A + A + ++M G+S
Sbjct: 305 ---------------MEKDGIMPDVVVYNALITAFCKVKKFENAFRVMDDMQGHGISPNS 349
Query: 385 R 385
R
Sbjct: 350 R 350
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 138/308 (44%), Gaps = 34/308 (11%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A A+ FN +E H +NS++ L K + + +M + S P+
Sbjct: 153 AQKLDEAVYTFNVMEK-YGVAHNLAAFNSLLSALCKSKNVRKAQEIFDKMNNRFS--PDA 209
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA----QE 122
T+ I+ + + A + + ++ + G + D V+Y +VDALC+ V EA Q+
Sbjct: 210 KTYSILLEGWGRAPSLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQD 269
Query: 123 L-----------------CFGENKNV--GFSGLVEMNKTKI------YNMILRGWFKMSW 157
+ +G + + + ++M K I YN ++ + K+
Sbjct: 270 MSSRGCQPTTFIYSILVHTYGVDMRIEDAVAAFLDMEKDGIMPDVVVYNALITAFCKVKK 329
Query: 158 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
+ ++M G+ + +++I ++ + GK +A ++++ M K+ K D Y
Sbjct: 330 FENAFRVMDDMQGHGISPNSRTWNIILNTLISLGKDDEAYRVFRSMIKR-CKPDSDTYTM 388
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
+I+ ++ ++ A++V++ MR PS+ T + +I LC+ G V +A +L +M +KG
Sbjct: 389 MIKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKG 448
Query: 278 CVPDVITY 285
P T+
Sbjct: 449 IRPPGSTF 456
>gi|255548349|ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545711|gb|EEF47215.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 505
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 181/371 (48%), Gaps = 14/371 (3%)
Query: 13 RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
+ALEFF + + F HT + ++++ ILG+ +FD W+++ +MK + + T +I
Sbjct: 87 QALEFFYYTDNRKGFYHTPYSLDTILYILGRSRKFDHIWDVLIKMKRKDRFLISPRTMQI 146
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEF-GLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNV 131
+ R V + + +F K +F + D + L+ LC+ K + +A+ + K
Sbjct: 147 VLARVAKLCSVRQTVESFRKFKKFVSVLDTTCFNALLRTLCQEKSMTDARNVYHRLKKEF 206
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
+ +N++L GW K S + F+EEM + G+ D+ SY+ +D+ CK
Sbjct: 207 K-------PNLQTFNILLSGW-KQSEEAEL--FFEEMRELGIKPDVVSYNSLIDVYCKDR 256
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
+ KA K+ ++M+++ I DV+ Y ++I +G+ D A + EM+E GC P V N
Sbjct: 257 EMEKAYKVVEKMREEDISPDVITYTSIIGGLGLVGQPDKARDILNEMKEYGCYPDVAAYN 316
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIES 308
VI+ C R+ +A ++ EM KG P+ TY+ FFR R L+ RM+ES
Sbjct: 317 AVIRNYCIAKRLGDASNLMDEMASKGLSPNATTYNLFFRVFYWSNDLRNSWSLYRRMMES 376
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G P + + L+R F + + +W M E G + L D L D G L A
Sbjct: 377 GCLPNTQSCMFLIRLFRKHEKVEMALTLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEA 436
Query: 369 RKYDEEMFAKG 379
K +M KG
Sbjct: 437 EKCFLQMIEKG 447
>gi|108711050|gb|ABF98845.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215693326|dbj|BAG88708.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625789|gb|EEE59921.1| hypothetical protein OsJ_12549 [Oryza sativa Japonica Group]
Length = 554
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 185/384 (48%), Gaps = 12/384 (3%)
Query: 4 LSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
L+ ++NDW A FF WV T + H D+Y+ ++DILGKF +FDL W LI++M +
Sbjct: 139 LTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGL 198
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQE 122
+ ++M +R A EA+ F+K+D FG +KD + L+D LC+ + V A+
Sbjct: 199 MSLMTMTKVM-RRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARG 257
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ F E G + ++ +N ++ GW K + + EEM + G + +Y+
Sbjct: 258 V-FQE-----LRGTIPPDENS-FNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTS 310
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ C L EM+K+ +VV Y ++ A+G + A+ + +++E G
Sbjct: 311 LVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDG 370
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREIL 299
P N++I +L GR+ +AY+V+ EM G P+V T++ + L
Sbjct: 371 VAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENAL 430
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
L +M E P + TY LL+ + +++ + + M SPD Y LV L
Sbjct: 431 KLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWL 490
Query: 360 IDKGMLDMARKYDEEMFAKGLSAK 383
G + + + EEM +KG + K
Sbjct: 491 CRNGKVAQSCLFLEEMVSKGFAPK 514
>gi|115455297|ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group]
gi|113549720|dbj|BAF13163.1| Os03g0746400, partial [Oryza sativa Japonica Group]
Length = 613
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 185/384 (48%), Gaps = 12/384 (3%)
Query: 4 LSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
L+ ++NDW A FF WV T + H D+Y+ ++DILGKF +FDL W LI++M +
Sbjct: 198 LTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGL 257
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQE 122
+ ++M +R A EA+ F+K+D FG +KD + L+D LC+ + V A+
Sbjct: 258 MSLMTMTKVM-RRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARG 316
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ F E G + ++ +N ++ GW K + + EEM + G + +Y+
Sbjct: 317 V-FQE-----LRGTIPPDENS-FNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTS 369
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ C L EM+K+ +VV Y ++ A+G + A+ + +++E G
Sbjct: 370 LVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDG 429
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREIL 299
P N++I +L GR+ +AY+V+ EM G P+V T++ + L
Sbjct: 430 VAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENAL 489
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
L +M E P + TY LL+ + +++ + + M SPD Y LV L
Sbjct: 490 KLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWL 549
Query: 360 IDKGMLDMARKYDEEMFAKGLSAK 383
G + + + EEM +KG + K
Sbjct: 550 CRNGKVAQSCLFLEEMVSKGFAPK 573
>gi|356547476|ref|XP_003542138.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Glycine max]
Length = 504
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 184/378 (48%), Gaps = 16/378 (4%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
+WK AL F W +CH + N +I +L +F +W +I M + SS+
Sbjct: 103 EWKPALLAFKW---NCH-GNDEKVCNLMIWVLTTHGKFSTAWCIIRDM--HRSSLSTRQA 156
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGEN 128
IM RY +A+ +A+ TFN +D+F L D+ ++ L+ AL +Y +V EA+E
Sbjct: 157 MLIMIDRYASANNSAKAIQTFNFMDKFRLTPDQEAFHALLTALSKYGNVEEAEEFMLVNK 216
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSW-WGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
K L +N T+ +N+IL GW ++ + + W EM K + + SYS +
Sbjct: 217 K------LFPLN-TESFNIILNGWCNITKDVYEAKRVWREMSKYCITPNATSYSYMISCF 269
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
G + +++LY +MKK+G + YN+++ + + A+R +++E G QP
Sbjct: 270 SNEGNLFDSLRLYDQMKKRGWIPGIEIYNSLVYVLTHENCLKEALRTIDKLKEQGLQPGS 329
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIE 307
T N++I LCE G++ A + M ++ P TYH FF + + L RM +
Sbjct: 330 ATFNSMILPLCEAGKLAGARIIFNTMVEENVSPTTETYHAFFEGTDY-QGTLEFLTRMKD 388
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
SG+ P D++V++L KF + W +M+ P Y +V+ L+
Sbjct: 389 SGLGPNKDSFVIILAKFLKLKQPVNALKFWTEMKTYDVLPSCVHYRIMVEGLVTCRWFVK 448
Query: 368 ARKYDEEMFAKGLSAKPR 385
AR + EEM + G SA P+
Sbjct: 449 ARDFYEEMVSNGCSADPK 466
>gi|449454008|ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
gi|449490811|ref|XP_004158714.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
Length = 621
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 180/385 (46%), Gaps = 13/385 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E L+ + K A FF W F H + TYN+++ ILGK +F+ +L+ M +
Sbjct: 180 EVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEMAEK- 238
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
+ TF + FK + A +A+G + ++ K V N L+D+L K EA
Sbjct: 239 -ELLTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKEA 297
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
L E + F+ ++ Y ++L GW ++ + + W +M D+ ++
Sbjct: 298 --LTIFEKLHGRFTPNLQ-----TYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAH 350
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ ++ + + K A+KL++ MK KG DV +Y ++R + A++ + EM+
Sbjct: 351 NTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQG 410
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PRE 297
GC+P +I R+ Y +L EM GC PD TY+ + + P +
Sbjct: 411 AGCRPDAAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDD 470
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ ++ +MIE+GI+P TY M+++ + + W +M+ GC PD+ +Y +
Sbjct: 471 AVRIYKKMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIG 530
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSA 382
LI G A KY EEM KG+ A
Sbjct: 531 GLISLGRCAEAGKYLEEMIEKGMKA 555
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 91/225 (40%), Gaps = 7/225 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
P+ M + + ++A+ F + G +V SY LV C+ + EA +
Sbjct: 345 PDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQY 404
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F E + G IY ++ G+ +EM G D +Y+
Sbjct: 405 -FEEMQGAGCRP-----DAAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNAL 458
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ +M P AV++YK+M + GIK Y+ ++++ + + + + EM+ GC
Sbjct: 459 IKLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGC 518
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
P + I L GR EA L EM +KG + Y+ F
Sbjct: 519 CPDDNSYTVFIGGLISLGRCAEAGKYLEEMIEKGMKAPQLDYNKF 563
>gi|356515931|ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 461
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 184/382 (48%), Gaps = 14/382 (3%)
Query: 3 TLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPS 62
L + N A FF W E ++H+ Y+ +I+ L K ++ + W+L+ M+
Sbjct: 50 VLKRFENAGMPAFRFFEWAEKQRGYSHSIRAYHLMIESLAKIRQYQIVWDLVSAMRKK-- 107
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQ 121
+ N TF IM ++Y A+ V+EA+ TFN +D++ + ++ N L+ ALC+ +V +AQ
Sbjct: 108 GMLNVETFCIMMRKYARANKVDEAVYTFNVMDKYDVVPNLAAFNGLLSALCKSNNVRKAQ 167
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
E+ F K K Y+++L GW K + RE + EM + G D+ +Y
Sbjct: 168 EI-FDAMKGQFVPD------EKSYSILLEGWGKAPNLPRAREVFREMVEAGCDPDVVTYG 220
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
I +D++CK+G+ +AV++ KEM + Y+ ++ GV ++ A+ + EM +
Sbjct: 221 IMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSVLVHTYGVEHRIEDAIDTFLEMAKK 280
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREI 298
G + VV N +I C+ + + + VL EM G P+ T + + +
Sbjct: 281 GIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNVIISSMIGQGQTDRA 340
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+F RMI+ P DTY M+++ F L +WK M+ P ++AL+
Sbjct: 341 FRVFCRMIKL-CEPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQFVPSMHTFSALIKG 399
Query: 359 LIDKGMLDMARKYDEEMFAKGL 380
L +K A EEM KG+
Sbjct: 400 LCEKDNAAKACVVMEEMIEKGI 421
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 33/218 (15%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
MDK VV +L +++ + +CKS KA +++ MK + + D +Y+ ++ G +
Sbjct: 138 MDKYDVVPNLAAFNGLLSALCKSNNVRKAQEIFDAMKGQFVP-DEKSYSILLEGWGKAPN 196
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
+ A V+REM E GC P VVT ++ +LC+ GRV EA V+ EM C P Y
Sbjct: 197 LPRAREVFREMVEAGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSV 256
Query: 288 FFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
+E I +DT++ + +K G
Sbjct: 257 LVHTYG------------VEHRIEDAIDTFLEMAKK--------------------GIKA 284
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
D AYNAL+ A + +EM + G++ R
Sbjct: 285 DVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSR 322
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 113/257 (43%), Gaps = 12/257 (4%)
Query: 8 ANDWKRALEFF-NWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
A + RA E F VE C TY ++D+L K D + ++ M D + P
Sbjct: 194 APNLPRAREVFREMVEAGCD--PDVVTYGIMVDVLCKAGRVDEAVEVVKEM-DVGNCRPT 250
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCF 125
+ ++ Y H + +A+ TF ++ + G+K D V+Y L+ A C+ +
Sbjct: 251 SFIYSVLVHTYGVEHRIEDAIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRV-L 309
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
E ++ G + I +MI +G ++ CR + D +Y++ +
Sbjct: 310 KEMESNGVAPNSRTCNVIISSMIGQGQTDRAFRVFCRMI------KLCEPDADTYTMMIK 363
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
+ C+ + A+K++K MK K + ++ +I+ + + A V EM E G +P
Sbjct: 364 MFCEKNELEMALKIWKYMKSKQFVPSMHTFSALIKGLCEKDNAAKACVVMEEMIEKGIRP 423
Query: 246 SVVTCNTVIKLLCENGR 262
S +T + +LL + GR
Sbjct: 424 SRITFGRLRQLLIKEGR 440
>gi|218193742|gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 185/384 (48%), Gaps = 12/384 (3%)
Query: 4 LSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
L+ ++NDW A FF WV T + H D+Y+ ++DILGKF +FDL W LI++M +
Sbjct: 1459 LTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGL 1518
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQE 122
+ ++M +R A EA+ F+K+D FG +KD + L+D LC+ + V A+
Sbjct: 1519 MSLMTMTKVM-RRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARG 1577
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ F E G + ++ +N ++ GW K + + EEM + G + +Y+
Sbjct: 1578 V-FQE-----LRGTIPPDENS-FNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTS 1630
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ C L EM+K+ +VV Y ++ A+G + A+ + +++E G
Sbjct: 1631 LVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDG 1690
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREIL 299
P N++I +L GR+ +AY+V+ EM G P+V T++ + L
Sbjct: 1691 VAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENAL 1750
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
L +M E P + TY LL+ + +++ + + M SPD Y LV L
Sbjct: 1751 KLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWL 1810
Query: 360 IDKGMLDMARKYDEEMFAKGLSAK 383
G + + + EEM +KG + K
Sbjct: 1811 CRNGKVAQSCLFLEEMVSKGFAPK 1834
>gi|357114607|ref|XP_003559090.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Brachypodium distachyon]
Length = 486
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 186/375 (49%), Gaps = 20/375 (5%)
Query: 14 ALEFFNWVETD----CHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
A FF W C+ HT +Y++V+ L K ++ L W+++ M+ + N T
Sbjct: 84 AYRFFEWARKQKRGGCN--HTIRSYHTVVASLAKIRQYQLMWDVVAIMRRE--GVVNVET 139
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGEN 128
F I+ ++Y A +EA+ TFN ++++G+ ++ N L+ ALC+ K+V +AQE+ +
Sbjct: 140 FGIIMRKYARAQKFDEAVYTFNIMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIF--DK 197
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
N F+ K Y+++L GW K K RE + EM G D+ +Y I +D +C
Sbjct: 198 MNGRFNP-----DAKTYSILLEGWGKAPNLPKMREVYSEMLDAGCQPDIVTYGIMVDSLC 252
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
K+G+ +AV + ++M +G + Y+ ++ GV ++ A+ + +M + G P VV
Sbjct: 253 KTGRVEEAVLVVQDMSSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDVV 312
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR---CLEKPREILGLFDRM 305
N ++ C+ + A+ V+ +M G P+ T++ L K E +F RM
Sbjct: 313 VYNALVTAFCKVKKFENAFRVMDDMEGHGIAPNSRTWNIILNKLISLGKDDEAYRVFRRM 372
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
I+ +P DTY M+++ F + VWK M P ++ L++ L DKG +
Sbjct: 373 IKR-CQPDSDTYTMMIKMFCENDNVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEV 431
Query: 366 DMARKYDEEMFAKGL 380
A E+M KG+
Sbjct: 432 SQACVLLEDMIEKGI 446
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 109/258 (42%), Gaps = 35/258 (13%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+ +I+R + + + + + M+K GVV +L +++ + +CKS KA +++ +M
Sbjct: 140 FGIIMRKYARAQKFDEAVYTFNIMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMN 199
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+ D Y+ ++ G + + VY EM + GCQP +VT ++ LC+ GRV
Sbjct: 200 GR-FNPDAKTYSILLEGWGKAPNLPKMREVYSEMLDAGCQPDIVTYGIMVDSLCKTGRVE 258
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
EA V+ +M +GC P Y +L+ +
Sbjct: 259 EAVLVVQDMSSRGCQPTTFIYS--------------------------------VLVHTY 286
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
G + + ME+ G PD YNALV A + A + ++M G++
Sbjct: 287 GVEMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFENAFRVMDDMEGHGIAPNS 346
Query: 385 R--EELGTKLVQGGLDGE 400
R + KL+ G D E
Sbjct: 347 RTWNIILNKLISLGKDDE 364
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 123/280 (43%), Gaps = 9/280 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + + ++A E F+ + + F TY+ +++ GK + M D P
Sbjct: 183 CKSKNVRKAQEIFD--KMNGRFNPDAKTYSILLEGWGKAPNLPKMREVYSEMLDAGCQ-P 239
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCF 125
+ T+ IM V EA+ + G + +++ + IE F
Sbjct: 240 DIVTYGIMVDSLCKTGRVEEAVLVVQDMSSRGCQPTTFIYSVLVHTYGVEMRIEDAVATF 299
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
+ + G + +YN ++ + K+ + ++M+ G+ + +++I ++
Sbjct: 300 LDMEKDGI-----VPDVVVYNALVTAFCKVKKFENAFRVMDDMEGHGIAPNSRTWNIILN 354
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
+ GK +A ++++ M K+ + D Y +I+ ++ V+ A++V++ MR P
Sbjct: 355 KLISLGKDDEAYRVFRRMIKR-CQPDSDTYTMMIKMFCENDNVEMALKVWKYMRLKQFLP 413
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
S+ T + +I LC+ G V +A +L +M +KG P T+
Sbjct: 414 SMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTF 453
>gi|21686921|gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 185/384 (48%), Gaps = 12/384 (3%)
Query: 4 LSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
L+ ++NDW A FF WV T + H D+Y+ ++DILGKF +FDL W LI++M +
Sbjct: 1418 LTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVE-VGG 1476
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQE 122
+ + T + +R A EA+ F+K+D FG +KD + L+D LC+ + V A+
Sbjct: 1477 LMSLMTMTKVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARG 1536
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ F E G + ++ +N ++ GW K + + EEM + G + +Y+
Sbjct: 1537 V-FQE-----LRGTIPPDENS-FNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTS 1589
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ C L EM+K+ +VV Y ++ A+G + A+ + +++E G
Sbjct: 1590 LVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDG 1649
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREIL 299
P N++I +L GR+ +AY+V+ EM G P+V T++ + L
Sbjct: 1650 VAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENAL 1709
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
L +M E P + TY LL+ + +++ + + M SPD Y LV L
Sbjct: 1710 KLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWL 1769
Query: 360 IDKGMLDMARKYDEEMFAKGLSAK 383
G + + + EEM +KG + K
Sbjct: 1770 CRNGKVAQSCLFLEEMVSKGFAPK 1793
>gi|125561327|gb|EAZ06775.1| hypothetical protein OsI_29018 [Oryza sativa Indica Group]
Length = 511
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 186/370 (50%), Gaps = 26/370 (7%)
Query: 28 THTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAM 87
+ D Y++V+D LG+ +FD +W L+ + ++ P TF ++ +RYV A + +A+
Sbjct: 100 SRAADAYDAVVDALGRARQFDAAWRLVVEAAADGAATPR--TFAVLARRYVAAGMTRQAV 157
Query: 88 GTFNKLDEFGLK--DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
F+ ++ F + D + L+D LC+YK+ A E+ F + K E N+ K+Y
Sbjct: 158 RAFDDMEAFVGREPDAAEFTTLLDTLCKYKYPKVAAEV-FNKRKYK-----YEPNE-KMY 210
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK---------- 195
+++ GW K++ ++F ++M G+ ++ +Y+I ++ +C+
Sbjct: 211 TVLIYGWCKVNRNDMAQKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRA 270
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A L KEM ++GI+ DV +Y+ ++ + + + ++R M+E G P+V T +VIK
Sbjct: 271 AEDLLKEMHQRGIEPDVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIK 330
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESG--I 310
L GR+ +A ++L EM +G P TY+CFF+ +++ L L+++M G
Sbjct: 331 CLASCGRLDDAESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPA 390
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
P + TY +LL F + V VW M E PD +Y LV L D A +
Sbjct: 391 TPDIHTYNILLGMFIKLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQ 450
Query: 371 YDEEMFAKGL 380
+ EM +G
Sbjct: 451 FFMEMIERGF 460
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 95/227 (41%), Gaps = 16/227 (7%)
Query: 172 GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFA 231
G D ++ +D +CK P A +++ + K K + + Y +I D A
Sbjct: 168 GREPDAAEFTTLLDTLCKYKYPKVAAEVFNKRKYK-YEPNEKMYTVLIYGWCKVNRNDMA 226
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGR----------VREAYAVLAEMPKKGCVPD 281
+ ++M G +P++VT N ++ +C + VR A +L EM ++G PD
Sbjct: 227 QKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLKEMHQRGIEPD 286
Query: 282 VITY----HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVW 337
V +Y H + R KP L +F M E GI P + TY +++ G L +
Sbjct: 287 VTSYSVILHVYSRA-HKPELCLCMFRSMKERGICPTVATYTSVIKCLASCGRLDDAESLL 345
Query: 338 KKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
+M G P YN + ++ A + +M A G A P
Sbjct: 346 DEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATP 392
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 97/240 (40%), Gaps = 17/240 (7%)
Query: 65 PNHATFRIMFK---RYVTAH-------LVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEY 114
PN T+ I+ R+ + H V A ++ + G++ +V+ +++ +
Sbjct: 240 PNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLKEMHQRGIEPDVTSYSVILHVYSR 299
Query: 115 KHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVV 174
H ELC +++ G+ T Y +++ +EM GV
Sbjct: 300 AH---KPELCLCMFRSMKERGICPTVAT--YTSVIKCLASCGRLDDAESLLDEMASEGVC 354
Query: 175 KDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM--DVVAYNTVIRAVGVSEGVDFAM 232
+Y+ + A++LY +MK G D+ YN ++ D M
Sbjct: 355 PSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHTYNILLGMFIKLNQHDTVM 414
Query: 233 RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
+V+ +M E P + + ++ LC+N + REA EM ++G +P IT+ +R L
Sbjct: 415 QVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQFFMEMIERGFLPQKITFETLYRGL 474
>gi|357520891|ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524756|gb|AET05210.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 187/373 (50%), Gaps = 13/373 (3%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP-NHATFRI 72
A FF W ++ F H+ +++ +++ILG+ +F + W+ + +++ SS + F I
Sbjct: 90 AHRFFLWAKSIPGFQHSVQSFHILVEILGRSKQFAILWDFLIETRESDSSCKITNEIFWI 149
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV-DALCEYKHVIEAQELCFGENKNV 131
+F Y A L + A+ +F ++DEFG+K + +L+ LC+ KHV +AQ+ F +
Sbjct: 150 IFTAYSRADLPDGAIRSFVRMDEFGIKPSIIDVDLLLYTLCKKKHVRQAQQ--FFDQVKS 207
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
F + TK Y++++ GW K+ GK RE ++ M ++G DL +Y+ ++ +CK G
Sbjct: 208 HF-----LLTTKTYSILINGWGKIGDSGKARELFDAMLEQGCHVDLLAYNNLLEALCKGG 262
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
+A+ +M K ++ D Y+ IR+ + V A V +MR P+V T N
Sbjct: 263 HVDEAMDFLNDMLSKKVEPDAFTYSIFIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYN 322
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF--FRCLE-KPREILGLFDRMIES 308
+IK LC+ +V EAY +L EM G PD +Y+ + C + L L RM +
Sbjct: 323 CIIKRLCKIKKVEEAYQLLDEMISSGLKPDTWSYNAIQAYHCDHCEVNRALKLISRMEKD 382
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI-DKGMLDM 367
P TY M+L+ R G VW+ M + P Y+ ++ L KG L+
Sbjct: 383 VCFPDRHTYNMVLKLLIRIGRFDKATEVWECMGDKKFYPSVSTYSVMIHGLCKKKGKLEE 442
Query: 368 ARKYDEEMFAKGL 380
A KY M +G+
Sbjct: 443 ACKYFAMMIDEGI 455
>gi|326520119|dbj|BAK03984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 485
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 186/374 (49%), Gaps = 17/374 (4%)
Query: 14 ALEFFNWVETDCH---FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
A FF W HT ++++V+ L K ++ L W+++ M+ + N TF
Sbjct: 82 AYRFFEWARKQRRGGGCAHTVRSFHTVVASLAKIRQYQLMWDVVAIMRRQ--GVVNVETF 139
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENK 129
I+ ++Y A V+EA+ TFN ++++G+ ++ N L+ ALC+ K+V +AQE+ E
Sbjct: 140 GIIMRKYARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLLCALCKSKNVRKAQEIF--EQM 197
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
N FS K Y+++L GW + K R+ + +M G D+ +Y I +D +CK
Sbjct: 198 NGRFS-----PDAKTYSILLEGWGRAPNLPKMRKVYSDMLDAGCQPDIVTYGIMVDSLCK 252
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
+G+ +AV + ++M +G + Y+ ++ GV ++ A+ + +M++ G P VV
Sbjct: 253 TGRVEEAVFVVQDMTSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMQKDGIVPDVVV 312
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR---CLEKPREILGLFDRMI 306
N ++ C+ + A+ V+ +M G P+ T++ L K E +F RMI
Sbjct: 313 YNALVTAFCKVKKFDNAFRVMDDMEGHGITPNSRTWNIILNKLISLGKDDEAYRVFRRMI 372
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
+ +P DTY M+++ F L VWK M P ++ L++ L DKG +
Sbjct: 373 KR-CQPDSDTYTMMIKMFCENDRLEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVS 431
Query: 367 MARKYDEEMFAKGL 380
A E+M KG+
Sbjct: 432 QACVLLEDMIEKGI 445
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 110/258 (42%), Gaps = 35/258 (13%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+ +I+R + + + + M+K GVV +L +++ + +CKS KA +++++M
Sbjct: 139 FGIIMRKYARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLLCALCKSKNVRKAQEIFEQMN 198
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+ D Y+ ++ G + + +VY +M + GCQP +VT ++ LC+ GRV
Sbjct: 199 GR-FSPDAKTYSILLEGWGRAPNLPKMRKVYSDMLDAGCQPDIVTYGIMVDSLCKTGRVE 257
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
EA V+ +M +GC P Y +L+ +
Sbjct: 258 EAVFVVQDMTSRGCQPTTFIYS--------------------------------VLVHTY 285
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
G + + M++ G PD YNALV A D A + ++M G++
Sbjct: 286 GVEMRIEDAVATFLDMQKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGITPNS 345
Query: 385 R--EELGTKLVQGGLDGE 400
R + KL+ G D E
Sbjct: 346 RTWNIILNKLISLGKDDE 363
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 123/280 (43%), Gaps = 9/280 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + + ++A E F + + F+ TY+ +++ G+ + M D P
Sbjct: 182 CKSKNVRKAQEIFE--QMNGRFSPDAKTYSILLEGWGRAPNLPKMRKVYSDMLDAGCQ-P 238
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCF 125
+ T+ IM V EA+ + G + +++ + IE F
Sbjct: 239 DIVTYGIMVDSLCKTGRVEEAVFVVQDMTSRGCQPTTFIYSVLVHTYGVEMRIEDAVATF 298
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
+ + G + +YN ++ + K+ + ++M+ G+ + +++I ++
Sbjct: 299 LDMQKDGI-----VPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGITPNSRTWNIILN 353
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
+ GK +A ++++ M K+ + D Y +I+ ++ ++ A++V++ MR P
Sbjct: 354 KLISLGKDDEAYRVFRRMIKR-CQPDSDTYTMMIKMFCENDRLEMALKVWKYMRLKQFLP 412
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
S+ T + +I LC+ G V +A +L +M +KG P T+
Sbjct: 413 SMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTF 452
>gi|449505568|ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 614
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 195/387 (50%), Gaps = 14/387 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+ L + NDW +A F W + + H+ ++YNS++DILGK F L W L+ M
Sbjct: 201 QLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLA 260
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
S+ + T + +R A EA+ F ++++G+ + + N L+DAL + V +A
Sbjct: 261 GSV-SLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEASVEDA 319
Query: 121 QELCFGENK-NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
+ F E K ++ F+ +N+++ G+ K + + E++K G+ D+ S
Sbjct: 320 HNV-FRELKCSIPFN-------LASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVIS 371
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y+ +++ C+ K+ +M+ KG K +V+ + ++ A+G ++ ++ A++VY +M+
Sbjct: 372 YTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMK 431
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPR 296
+ GC P +++I +L + GR+ + ++ +M K+G PDV+TY+ C +
Sbjct: 432 KEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEE 491
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
L L +M E +P + TY LL+ F R ++ + + M + S + Y LV
Sbjct: 492 TALTLLLKMEEVSCKPDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILV 551
Query: 357 DALIDKGMLDMARKYDEEMFAKGLSAK 383
L + G L +A + EM +K + K
Sbjct: 552 RGLCENGKLHLACSFFGEMLSKAMVPK 578
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 139/325 (42%), Gaps = 49/325 (15%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP-N 66
A + A+ F +E T TT N ++D L K + + N+ +K SIP N
Sbjct: 278 AGRHQEAIHAFRNIEKYGISTDTT-AMNVLMDALVKEASVEDAHNVFRELK---CSIPFN 333
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCF 125
A+F ++ Y A ++EA ++++ GL+ D +SY ++A C K ++
Sbjct: 334 LASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLV 393
Query: 126 G-ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
E+K + + + +I+ K + + +E+M K G V D YS +
Sbjct: 394 QMEHKGCKPNVIT-------FTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLI 446
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
I+ K+G+ ++ ++M+K+G+ DV+ YNT+I + A+ + +M E+ C+
Sbjct: 447 FILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCK 506
Query: 245 PSVVTCNTVIKL-----------------------------------LCENGRVREAYAV 269
P + T + ++K+ LCENG++ A +
Sbjct: 507 PDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGKLHLACSF 566
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEK 294
EM K VP T+ LE+
Sbjct: 567 FGEMLSKAMVPKDSTFKMLKEELER 591
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 184/381 (48%), Gaps = 36/381 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY++VI + + D ++ L +M +N +PN T+ + L++EA ++
Sbjct: 79 TYSTVIHGFCRQTKVDTAYKLFRQMVEN-GCMPNLVTYNTLLSGLCRNGLMDEAYELLDE 137
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKN-------VGFSGLVE-MNKTK 143
+ E GL+ D+ SY L+ LC+ + A ++ F +N N V +S L+ + KT
Sbjct: 138 MRERGLQPDKFSYDTLMAGLCKTGKIDMALKV-FEDNSNGDCPPDVVAYSTLIAGLCKTG 196
Query: 144 ----------------------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
+ ++ G K + ++ E M+ R ++ +YS
Sbjct: 197 RLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYS 256
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+D +CK+G+ A +++K M +GI+ +VV YN++I ++ GVD A+ + EM
Sbjct: 257 SLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTAT 316
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREI 298
GC P ++T NT+I LC+ GR EA + +M K C PDVITY C F LE+
Sbjct: 317 GCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMA 376
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
LFD M++ + P + T+ L+ + G + + ++M CSPD + Y +LVD
Sbjct: 377 RTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDG 436
Query: 359 LIDKGMLDMARKYDEEMFAKG 379
G + AR+ + M +G
Sbjct: 437 FCKVGRMVEARRVLKRMAKRG 457
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 181/411 (44%), Gaps = 49/411 (11%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
Y+++I L K D + L +M++N S P+ TF + + EA
Sbjct: 184 AYSTLIAGLCKTGRLDEACKLFEKMREN-SCEPDVVTFTALMDGLCKGDRLQEAQQVLET 242
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+++ V +Y +L+D LC+ V +AQE+ K + G +E N YN ++ G
Sbjct: 243 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEV----FKRMIVRG-IEPNVV-TYNSLIHG 296
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK------- 204
+ + EEM G + D+ +Y+ +D +CK+G+ +A +L+ +MK
Sbjct: 297 FCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPD 356
Query: 205 ----------------------------KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
K+ + DVV ++T++ + VD A R+
Sbjct: 357 VITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLE 416
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---E 293
EM C P V T +++ C+ GR+ EA VL M K+GC P+V+TY
Sbjct: 417 EMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAG 476
Query: 294 KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKME-ELGCSPDEFAY 352
KP L + M+ +G++P + TY L+ F G L + +++E + C D FAY
Sbjct: 477 KPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAY 536
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQSG 403
++D L G + A + E + G PR ++ L++G G++ G
Sbjct: 537 RVMMDGLCRTGRMSAALELLEAIKQSG--TPPRHDIYVALIRGLCQGKELG 585
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 121/234 (51%), Gaps = 3/234 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+ +++ G K + + ++ +M K+G V + +Y++ ++ CK K +A L KEMK
Sbjct: 10 WTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMK 69
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+ G+ +VV Y+TVI VD A +++R+M E GC P++VT NT++ LC NG +
Sbjct: 70 ESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMD 129
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
EAY +L EM ++G PD +Y L K +I L +F+ P + Y L+
Sbjct: 130 EAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLI 189
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
+ G L +++KM E C PD + AL+D L L A++ E M
Sbjct: 190 AGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 243
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 171/387 (44%), Gaps = 20/387 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + + A + +E D + T TY+S+ID L K + + + RM P
Sbjct: 228 CKGDRLQEAQQVLETME-DRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIE-P 285
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELC 124
N T+ + + + V+ A+ ++ G L D ++Y L+D LC+ EA L
Sbjct: 286 NVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRL- 344
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
FG+ K F Y+ ++ G+ K+ R +++M K+ V+ D+ ++S +
Sbjct: 345 FGDMK-AKFCN----PDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLV 399
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ C +G A +L +EM DV Y +++ + A RV + M + GCQ
Sbjct: 400 EGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQ 459
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCLEKPREI 298
P+VVT +I C G+ AY +L EM G P+VITY C LE+ R++
Sbjct: 460 PNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKM 519
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
L +R + + M Y +++ R G + + + +++ G P Y AL+
Sbjct: 520 LERLER--DENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRG 577
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAKPR 385
L L A + EEM LS K R
Sbjct: 578 LCQGKELGKAMEVLEEMT---LSRKSR 601
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 113/230 (49%), Gaps = 5/230 (2%)
Query: 175 KDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRV 234
K++ +++I +D +CK+ + +A + +MKKKG + YN +I V A +
Sbjct: 5 KNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLL 64
Query: 235 YREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
+EM+E G P+VVT +TVI C +V AY + +M + GC+P+++TY+ L +
Sbjct: 65 LKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCR 124
Query: 295 P---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFA 351
E L D M E G++P +Y L+ + G + V++ C PD A
Sbjct: 125 NGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVA 184
Query: 352 YNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
Y+ L+ L G LD A K E+M S +P T L+ G G++
Sbjct: 185 YSTLIAGLCKTGRLDEACKLFEKMREN--SCEPDVVTFTALMDGLCKGDR 232
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 74/144 (51%), Gaps = 3/144 (2%)
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPRE 297
M C+ +V+T +I LC+ R+ EA A+M KKG VP+ TY+ F + K
Sbjct: 1 MECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHR 60
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
L M ESG+ P + TY ++ F R + + ++++M E GC P+ YN L+
Sbjct: 61 AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS 120
Query: 358 ALIDKGMLDMARKYDEEMFAKGLS 381
L G++D A + +EM +GL
Sbjct: 121 GLCRNGLMDEAYELLDEMRERGLQ 144
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 180/369 (48%), Gaps = 15/369 (4%)
Query: 33 TYNSVID-ILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
+YNSV+D I+ LS ++R PN T+ I+ + + + + + +G F
Sbjct: 179 SYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFG 238
Query: 92 KLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI-YNMIL 149
+++ G L + V+Y L+DA C+ + EA FG K++ G M I YN+I+
Sbjct: 239 EMERNGCLPNVVTYNTLIDAYCKMGRIDEA----FGLLKSMSSKG---MQPNLISYNVII 291
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G + + E EEM +G D +Y+ ++ CK G +A+ ++ EM + G+
Sbjct: 292 NGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVS 351
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
VV Y +I ++ + ++ AM + +MR G +P+ T T+I G + EAY +
Sbjct: 352 PSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRI 411
Query: 270 LAEMPKKGCVPDVITYHCFFR---CLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
L EM + G P V+TY+ F LE+ E LG+ M+E G+ P + +Y ++ F R
Sbjct: 412 LNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCR 471
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPRE 386
G L F + ++M E G SPD Y++L+ L + L A +EM GL P E
Sbjct: 472 KGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGL--PPDE 529
Query: 387 ELGTKLVQG 395
T L+
Sbjct: 530 FTYTTLINA 538
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 161/351 (45%), Gaps = 11/351 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN +I E M+ N +PN T+ + Y ++EA G
Sbjct: 216 TYNILIRGFCSVGELQKGLGCFGEMERN-GCLPNVVTYNTLIDAYCKMGRIDEAFGLLKS 274
Query: 93 LDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G++ +SY +++ LC + EA E+ + +G+ G T YN +L G
Sbjct: 275 MSSKGMQPNLISYNVIINGLCREGSMKEAWEIL----EEMGYKGFTPDEVT--YNTLLNG 328
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K + + EM + GV + +Y+ ++ MCK+ +A++ + +M+ +G++ +
Sbjct: 329 YCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPN 388
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
Y T+I ++ A R+ EM E G PSVVT N I C R+ EA V+
Sbjct: 389 ERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQ 448
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREILGLF---DRMIESGIRPKMDTYVMLLRKFGRWG 328
EM +KG PDV++Y + E+ F M+E G+ P TY L++
Sbjct: 449 EMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMR 508
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L + ++M ++G PDEF Y L++A +G L+ A +EM KG
Sbjct: 509 RLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKG 559
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 156/326 (47%), Gaps = 24/326 (7%)
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIE--AQELC 124
A F +M K Y +++++A+ T N G V SY +++DA+ + ++ A+E+
Sbjct: 143 AVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEV- 201
Query: 125 FGENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
EM ++++ YN+++RG+ + K + EM++ G + ++
Sbjct: 202 -----------YREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVV 250
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+Y+ +D CK G+ +A L K M KG++ ++++YN +I + + A + EM
Sbjct: 251 TYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEM 310
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI 298
G P VT NT++ C+ G +A + AEM + G P V+TY + K R +
Sbjct: 311 GYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNL 370
Query: 299 ---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
+ FD+M G+RP TY L+ F R G L + + +M E G SP YNA
Sbjct: 371 NRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAF 430
Query: 356 VDALIDKGMLDMARKYDEEMFAKGLS 381
+ ++ A +EM KGL+
Sbjct: 431 IHGHCVLERMEEALGVVQEMVEKGLA 456
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 160/372 (43%), Gaps = 26/372 (6%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
FT TYN++++ K F + + M N S P+ T+ + A +N A
Sbjct: 315 FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVS-PSVVTYTALINSMCKARNLNRA 373
Query: 87 MGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
M F+++ GL+ +E +Y L+D + EA + E GFS V Y
Sbjct: 374 MEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRI-LNEMTESGFSPSV-----VTY 427
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N + G + + +EM ++G+ D+ SYS + C+ G+ +A ++ +EM +
Sbjct: 428 NAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVE 487
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
KG+ D V Y+++I+ + + A + +EM +MG P T T+I C G + +
Sbjct: 488 KGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNK 547
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGL---------------FDRMIE 307
A + EM KG +PD +TY L K RE L +D +IE
Sbjct: 548 ALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIE 607
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
+ + + V L++ F G + V++ M E P E YN ++ G L
Sbjct: 608 NCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPK 667
Query: 368 ARKYDEEMFAKG 379
A +EM G
Sbjct: 668 AFNLYKEMIHSG 679
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 15/289 (5%)
Query: 120 AQELCFGENKNVGFSGL--------VEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKR 171
AQEL + G S V + + +++++++ + ++ +
Sbjct: 112 AQELALSASDPSGSSIFQCLKDSYHVYNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSS 171
Query: 172 GVVKDLHSYSIYMDIMCKSGKPWK--AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVD 229
G + + SY+ +D + +S K A ++Y+EM + + +V YN +IR +
Sbjct: 172 GFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQ 231
Query: 230 FAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF 289
+ + EM GC P+VVT NT+I C+ GR+ EA+ +L M KG P++I+Y+
Sbjct: 232 KGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVII 291
Query: 290 R--CLEKP-REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
C E +E + + M G P TY LL + + G V+ +M G S
Sbjct: 292 NGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVS 351
Query: 347 PDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
P Y AL++++ L+ A ++ ++M +GL +P E T L+ G
Sbjct: 352 PSVVTYTALINSMCKARNLNRAMEFFDQMRIRGL--RPNERTYTTLIDG 398
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 65/353 (18%), Positives = 122/353 (34%), Gaps = 94/353 (26%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A + RA+EFF+ + TY ++ID + + ++ +++ M ++ S P
Sbjct: 365 CKARNLNRAMEFFDQMRIRG-LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFS-P 422
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-------------------------- 99
+ T+ + + EA+G ++ E GL
Sbjct: 423 SVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMK 482
Query: 100 ----------DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
D V+Y +L+ LCE + + EA +L E ++G Y ++
Sbjct: 483 QEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLS-QEMLDMGLPP-----DEFTYTTLI 536
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKL-YKEMKKKGI 208
+ K +EM +G + D +YS+ ++ + K + +A +L +K + ++ +
Sbjct: 537 NAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESV 596
Query: 209 KMDVV-------------------------------------------------AYNTVI 219
DV YN +I
Sbjct: 597 PSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVII 656
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
+ A +Y+EM G P VT T+IK L + G E V+ +
Sbjct: 657 HGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGD 709
>gi|224128340|ref|XP_002320305.1| predicted protein [Populus trichocarpa]
gi|222861078|gb|EEE98620.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 183/385 (47%), Gaps = 13/385 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E L + + K A FF W F H + TY+S++ IL K +F+ +++ M +
Sbjct: 111 EVLERFRHARKPAFRFFCWAAEKPGFVHDSRTYHSMMIILAKARQFETMMSMLEEMGEK- 169
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
+ TF I + + A +A+G F + + V N L+D+L K EA
Sbjct: 170 -RLLTLDTFSIAMRAFAAAKERKKAVGIFELMKNHKYRVGVETINALLDSLGRAKLGKEA 228
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
Q L FG+ G N + Y ++L GW ++ + W EM G D+ ++
Sbjct: 229 QAL-FGK-----LEGRFTPN-LRTYTVLLNGWCRVKNLMEAGRIWNEMLDEGFKPDIVTH 281
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+I ++ + +S K A+K ++ MK KG DV +Y +IR + + A+ + EM +
Sbjct: 282 NIMLEGLLRSKKRSDAIKFFEVMKAKGPSPDVRSYTILIRDLCKQTKMKEAVGYFYEMVD 341
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PRE 297
GC P ++ + R+ Y +L EM +KGC PD TY+ + + P +
Sbjct: 342 SGCHPDAAVYTCLMTGYGNHKRMDMVYELLKEMKEKGCPPDGKTYNALIKLMTSQRMPDD 401
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ ++ +MI++GI P + +Y M+++ + R VW +M + G PD+ +Y +
Sbjct: 402 AVRIYKKMIQNGIEPSIHSYNMIMKSYFRIRNYEMGHAVWDEMSKKGFCPDDNSYTVFIG 461
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSA 382
LI +G + A KY EEM KG+ A
Sbjct: 462 GLISQGRSEEACKYLEEMIEKGMKA 486
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 108/253 (42%), Gaps = 18/253 (7%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
P+ T IM + + + ++A+ F + G +V SY L+ LC+ + EA
Sbjct: 276 PDIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGPSPDVRSYTILIRDLCKQTKMKEA--- 332
Query: 124 CFGENKNVG-FSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
VG F +V+ +Y ++ G+ E +EM ++G D +
Sbjct: 333 -------VGYFYEMVDSGCHPDAAVYTCLMTGYGNHKRMDMVYELLKEMKEKGCPPDGKT 385
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y+ + +M P AV++YK+M + GI+ + +YN ++++ + V+ EM
Sbjct: 386 YNALIKLMTSQRMPDDAVRIYKKMIQNGIEPSIHSYNMIMKSYFRIRNYEMGHAVWDEMS 445
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPR 296
+ G P + I L GR EA L EM +KG + Y+ F F KP
Sbjct: 446 KKGFCPDDNSYTVFIGGLISQGRSEEACKYLEEMIEKGMKAPQLDYNKFAADFSRAGKPD 505
Query: 297 EILGLFDRMIESG 309
+ L +M SG
Sbjct: 506 ILEELAQKMKFSG 518
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 86/217 (39%), Gaps = 34/217 (15%)
Query: 169 DKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV 228
+K G V D +Y M I+ K+ + + + +EM +K + + + ++ +RA ++
Sbjct: 132 EKPGFVHDSRTYHSMMIILAKARQFETMMSMLEEMGEKRL-LTLDTFSIAMRAFAAAKER 190
Query: 229 DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
A+ ++ M+ + V T N ++ L +EA A+ +
Sbjct: 191 KKAVGIFELMKNHKYRVGVETINALLDSLGRAKLGKEAQALFGK---------------- 234
Query: 289 FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
+E P + TY +LL + R L +W +M + G PD
Sbjct: 235 -----------------LEGRFTPNLRTYTVLLNGWCRVKNLMEAGRIWNEMLDEGFKPD 277
Query: 349 EFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
+N +++ L+ A K+ E M AKG S R
Sbjct: 278 IVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGPSPDVR 314
>gi|449442128|ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 195/387 (50%), Gaps = 14/387 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+ L + NDW +A F W + + H+ ++YNS++DILGK F L W L+ M
Sbjct: 178 QLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLA 237
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
S+ + T + +R A EA+ F ++++G+ + + N L+DAL + V +A
Sbjct: 238 GSV-SLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEASVEDA 296
Query: 121 QELCFGENK-NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
+ F E K ++ F+ +N+++ G+ K + + E++K G+ D+ S
Sbjct: 297 HNV-FRELKCSIPFN-------LASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVIS 348
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y+ +++ C+ K+ +M+ KG K +V+ + ++ A+G ++ ++ A++VY +M+
Sbjct: 349 YTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMK 408
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPR 296
+ GC P +++I +L + GR+ + ++ +M K+G PDV+TY+ C +
Sbjct: 409 KEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEE 468
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
L L +M E +P + TY LL+ F R ++ + + M + S + Y LV
Sbjct: 469 TALTLLLKMEEVSCKPDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILV 528
Query: 357 DALIDKGMLDMARKYDEEMFAKGLSAK 383
L + G L +A + EM +K + K
Sbjct: 529 RGLCENGKLHLACSFFGEMLSKAMVPK 555
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 139/325 (42%), Gaps = 49/325 (15%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP-N 66
A + A+ F +E T TT N ++D L K + + N+ +K SIP N
Sbjct: 255 AGRHQEAIHAFRNIEKYGISTDTT-AMNVLMDALVKEASVEDAHNVFRELK---CSIPFN 310
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCF 125
A+F ++ Y A ++EA ++++ GL+ D +SY ++A C K ++
Sbjct: 311 LASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLV 370
Query: 126 G-ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
E+K + + + +I+ K + + +E+M K G V D YS +
Sbjct: 371 QMEHKGCKPNVIT-------FTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLI 423
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
I+ K+G+ ++ ++M+K+G+ DV+ YNT+I + A+ + +M E+ C+
Sbjct: 424 FILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCK 483
Query: 245 PSVVTCNTVIKL-----------------------------------LCENGRVREAYAV 269
P + T + ++K+ LCENG++ A +
Sbjct: 484 PDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGKLHLACSF 543
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEK 294
EM K VP T+ LE+
Sbjct: 544 FGEMLSKAMVPKDSTFKMLKEELER 568
>gi|357145431|ref|XP_003573640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Brachypodium distachyon]
Length = 523
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 178/345 (51%), Gaps = 12/345 (3%)
Query: 42 GKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-D 100
GK FDL+W + RM + I+ +RY A + +A+ TF+ +++F ++ D
Sbjct: 152 GKAGRFDLAWAAVRRMLHR--GVLTRRAMIIVMERYAAASELEKALKTFDVMEKFKVQAD 209
Query: 101 EVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSW-WG 159
+ + +L+ ALC+ K++ +A+EL K + + +N+IL GW +
Sbjct: 210 QAVFYSLLRALCKSKNIEDAEELLLMRKKFFPLTA-------EGFNIILDGWCNIIIDVA 262
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+ + W+EM + D SY++ + K G + +++Y EMKK+G + YN+++
Sbjct: 263 EAKRVWKEMSSYCITPDGTSYTLMVSCFSKVGNLFDTLRVYDEMKKRGWTPGIGVYNSLV 322
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
+ + A +++ ++ + G Q +V T N++I LCE+ ++ EA ++ +M KG V
Sbjct: 323 YVLTRENCMKDAKKIFSKIIDEGLQLNVETYNSMIIPLCESCKLDEARIMMGDMIMKGIV 382
Query: 280 PDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
P ++TYH F + E E L L +M E+G P DT++ML+ KF + VW +
Sbjct: 383 PTILTYHAFLK-QEGVDETLQLLRKMKENGCGPNSDTFLMLIDKFIQANESGNALRVWNE 441
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
M SP Y A++ L+ G + A +Y +EM AKG ++ P
Sbjct: 442 MIRYDISPAYSHYMAVIQGLVKHGCIPRALEYYDEMKAKGFASDP 486
>gi|359496995|ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Vitis vinifera]
Length = 622
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 199/390 (51%), Gaps = 13/390 (3%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMK-DNPSSIPNHATFRIMFK 75
FF W + H+ + Y ++I ILGK +F W LI M+ +NP + + F ++ +
Sbjct: 108 FFVWASKQPGYRHSYEVYKAMIKILGKMRQFGAVWALIEEMRRENPQFVSPY-VFVVLMR 166
Query: 76 RYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFS 134
R+ +A +V +A+ +++ ++G + DE + L+DALC+ V EA L E+ + F+
Sbjct: 167 RFASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLF--EDMRIRFT 224
Query: 135 GLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPW 194
+ K + +L GW + + + ++ + G D+ Y+ + +GK
Sbjct: 225 PTL-----KHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMV 279
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
A L KEM++K + +V+++ T+I+A+ + ++ AMRV+ EM+ GC VT T+I
Sbjct: 280 DAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLI 339
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIR 311
C+ G++ + Y +L M ++G +P+ +TY EK E+ + L + M + G
Sbjct: 340 SGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCT 399
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
P ++ Y +++R + G ++ VW +ME G SP + ++ + + L A ++
Sbjct: 400 PDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEF 459
Query: 372 DEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
+EM +GL + P+ +L+ L E+
Sbjct: 460 FKEMVGRGLLSAPQYGTLKELLNSLLRAEK 489
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 126/320 (39%), Gaps = 51/320 (15%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
YN+++ + +++L+ M+ PN +F + + + EAM F +
Sbjct: 264 VYNNLLTGYAAAGKMVDAYDLLKEMRRKECE-PNVMSFTTLIQALCAKKKMEEAMRVFFE 322
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G D V+Y L+ C++ + + EL N+ G + T Y I+
Sbjct: 323 MQSCGCPADAVTYTTLISGFCKWGKISKGYELL----DNMIQQGHIPNPMT--YLHIMAA 376
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK-- 209
K +C E EEM K G DL+ Y+I + + CK G+ + V+++ EM+ G+
Sbjct: 377 HEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPG 436
Query: 210 --------------------------------MDVVAYNTV---IRAVGVSEGVDFAMRV 234
+ Y T+ + ++ +E ++ + V
Sbjct: 437 LDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDV 496
Query: 235 YREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
+ + GC +V I L NG V+EA + +M G +P T+ R L K
Sbjct: 497 WSCIMTKGCDLNVYAWTIWIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGLRK 556
Query: 295 PREILGLFDRMIESGIRPKM 314
L++R I + I K+
Sbjct: 557 ------LYNRQIAAEITEKV 570
>gi|242038757|ref|XP_002466773.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
gi|241920627|gb|EER93771.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
Length = 487
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 16/373 (4%)
Query: 14 ALEFFNWV--ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
A FF W + HT +Y++V+ L K ++ L W+++ M+ + N TF
Sbjct: 85 AYRFFEWARRQKRGGCAHTVRSYHTVVASLAKIRQYQLMWDVVAVMR--KEGVANVETFS 142
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKN 130
I+ ++Y A +EA+ TFN ++ +G+ ++ N L+ ALC+ K+V +AQE+ + N
Sbjct: 143 IIMRKYARAQKFDEAVYTFNIMERYGVAHNLAAFNSLLGALCKSKNVRKAQEIF--DKMN 200
Query: 131 VGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS 190
FS K Y+++L GW + K RE + +M G D+ +Y I +D +CK+
Sbjct: 201 NRFS-----PDAKTYSILLEGWGRAPNLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKT 255
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTC 250
G+ +AV + ++M +G + Y+ ++ GV ++ A+ + +M + G P VV
Sbjct: 256 GRVEEAVCVVQDMSSRGCQPTTFIYSVLVHTYGVDMRIEDAVATFLDMEKDGIVPDVVVY 315
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC---LEKPREILGLFDRMIE 307
N ++ C+ + A+ V+ +M G P+ T++ L K E +F MI+
Sbjct: 316 NALVTAFCKVKKFDNAFRVMDDMEGHGISPNSRTWNIILNTLISLGKDDEAYRVFRNMIK 375
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
+P DTY M+++ F + VWK M P ++ L++ L DKG +
Sbjct: 376 R-CKPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQ 434
Query: 368 ARKYDEEMFAKGL 380
A E+M KG+
Sbjct: 435 ACVLLEDMIEKGI 447
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 100/241 (41%), Gaps = 33/241 (13%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+++I+R + + + + + M++ GV +L +++ + +CKS KA +++ +M
Sbjct: 141 FSIIMRKYARAQKFDEAVYTFNIMERYGVAHNLAAFNSLLGALCKSKNVRKAQEIFDKMN 200
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+ D Y+ ++ G + + VY +M GCQP +VT ++ LC+ GRV
Sbjct: 201 NR-FSPDAKTYSILLEGWGRAPNLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVE 259
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
EA V+ +M +GC P Y D IE + +D
Sbjct: 260 EAVCVVQDMSSRGCQPTTFIYSVLVHTYG--------VDMRIEDAVATFLD--------- 302
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
ME+ G PD YNALV A D A + ++M G+S
Sbjct: 303 ---------------MEKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGISPNS 347
Query: 385 R 385
R
Sbjct: 348 R 348
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 144/320 (45%), Gaps = 40/320 (12%)
Query: 2 ETLSCYANDWKRALEF------FNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIH 55
ET S + RA +F FN +E H +NS++ L K + +
Sbjct: 139 ETFSIIMRKYARAQKFDEAVYTFNIMER-YGVAHNLAAFNSLLGALCKSKNVRKAQEIFD 197
Query: 56 RMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEY 114
+M + S P+ T+ I+ + + A + + ++ + G + D V+Y +VDALC+
Sbjct: 198 KMNNRFS--PDAKTYSILLEGWGRAPNLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKT 255
Query: 115 KHVIEA----QEL-----------------CFGENKNV--GFSGLVEMNKTKI------Y 145
V EA Q++ +G + + + ++M K I Y
Sbjct: 256 GRVEEAVCVVQDMSSRGCQPTTFIYSVLVHTYGVDMRIEDAVATFLDMEKDGIVPDVVVY 315
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N ++ + K+ + ++M+ G+ + +++I ++ + GK +A ++++ M K
Sbjct: 316 NALVTAFCKVKKFDNAFRVMDDMEGHGISPNSRTWNIILNTLISLGKDDEAYRVFRNMIK 375
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+ K D Y +I+ ++ ++ A++V++ MR PS+ T + +I LC+ G V +
Sbjct: 376 R-CKPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQ 434
Query: 266 AYAVLAEMPKKGCVPDVITY 285
A +L +M +KG P T+
Sbjct: 435 ACVLLEDMIEKGIRPPGSTF 454
>gi|356495784|ref|XP_003516753.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 558
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 197/390 (50%), Gaps = 18/390 (4%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+ L+ ++NDW AL FF W ++ + H+ + YN ++DILGK FD L+ M
Sbjct: 132 QVLNRFSNDWVPALGFFKWAKSLTGYRHSPELYNLMVDILGKCRSFDSMSELVEEM---- 187
Query: 62 SSIPNHATFRIMFK---RYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHV 117
+ + + T M K R A +A+ F ++++FG+K + + N L+DAL + V
Sbjct: 188 ARLEGYVTLETMTKVMRRLARARKHEDAIEAFGRMEKFGVKKDTAALNVLIDALVKGDSV 247
Query: 118 IEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
A ++ + F G + ++ ++ +N+++ GW + + R+ E+M + G D+
Sbjct: 248 EHAHKVV------LEFKGSIPLS-SRSFNVLMHGWCRARDFDNARKAMEDMKEHGFEPDV 300
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
SY+ +++ K ++ +EM++ G + V Y +V+ +G + + A+ VY +
Sbjct: 301 FSYTNFIEAYGHERDFRKVDQVLEEMRENGCPPNAVTYTSVMLHLGKAGQLRKALEVYEK 360
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKP 295
M+ GC +++I +L + GR+++A V +MPK+G V DV+TY+ C
Sbjct: 361 MKSDGCVADTPFYSSMIFILGKAGRLKDACDVFEDMPKQGVVRDVVTYNSMISTACAHSR 420
Query: 296 REI-LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
E L L M + +P + TY LL+ + ++ + + M + SPD Y+
Sbjct: 421 EETALRLLKEMEDGSCKPNVGTYHRLLKMCCKKKRMKVLKFLLDHMFKNNISPDLATYSL 480
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
LV+AL G ++ A + EEM +G + KP
Sbjct: 481 LVNALRKSGKVEDAYSFLEEMVLRGFTPKP 510
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 128/291 (43%), Gaps = 14/291 (4%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP-NHATFRIMFKRYVTAHLVNEAMGT 89
T N +ID L K + + ++ K SIP + +F ++ + A + A
Sbjct: 231 TAALNVLIDALVKGDSVEHAHKVVLEFK---GSIPLSSRSFNVLMHGWCRARDFDNARKA 287
Query: 90 FNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
+ E G + +V SY N ++A + + ++ +N V Y +
Sbjct: 288 MEDMKEHGFEPDVFSYTNFIEAYGHERDFRKVDQVLEEMRENGCPPNAV------TYTSV 341
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ K K E +E+M G V D YS + I+ K+G+ A ++++M K+G+
Sbjct: 342 MLHLGKAGQLRKALEVYEKMKSDGCVADTPFYSSMIFILGKAGRLKDACDVFEDMPKQGV 401
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
DVV YN++I + A+R+ +EM + C+P+V T + ++K+ C+ R++
Sbjct: 402 VRDVVTYNSMISTACAHSREETALRLLKEMEDGSCKPNVGTYHRLLKMCCKKKRMKVLKF 461
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDT 316
+L M K PD+ TY L K ++ + M+ G PK T
Sbjct: 462 LLDHMFKNNISPDLATYSLLVNALRKSGKVEDAYSFLEEMVLRGFTPKPST 512
>gi|147767159|emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
Length = 655
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 199/390 (51%), Gaps = 13/390 (3%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMK-DNPSSIPNHATFRIMFK 75
FF W + H+ + Y ++I ILGK +F W LI M+ +NP + + F ++ +
Sbjct: 141 FFVWASKQPGYRHSYEVYKAMIKILGKMRQFGAVWALIEEMRRENPQFVSPY-VFVVLMR 199
Query: 76 RYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFS 134
R+ +A +V +A+ +++ ++G + DE + L+DALC+ V EA L E+ + F+
Sbjct: 200 RFASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLF--EDMRIRFT 257
Query: 135 GLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPW 194
+ K + +L GW + + + ++ + G D+ Y+ + +GK
Sbjct: 258 PTL-----KHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMV 312
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
A L KEM++K + +V+++ T+I+A+ + ++ AMRV+ EM+ GC VT T+I
Sbjct: 313 DAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLI 372
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIR 311
C+ G++ + Y +L M ++G +P+ +TY EK E+ + L + M + G
Sbjct: 373 SGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCT 432
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
P ++ Y +++R + G ++ VW +ME G SP + ++ + + L A ++
Sbjct: 433 PDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEF 492
Query: 372 DEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
+EM +GL + P+ +L+ L E+
Sbjct: 493 FKEMVGRGLLSAPQYGTLKELLNSLLRAEK 522
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 120/303 (39%), Gaps = 51/303 (16%)
Query: 50 SWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLV 108
+++L+ M+ PN +F + + + EAM F ++ G D V+Y L+
Sbjct: 314 AYDLLKEMRRKECE-PNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLI 372
Query: 109 DALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM 168
C++ + + EL N+ G + T Y I+ K +C E EEM
Sbjct: 373 SGFCKWGKISKGYELL----DNMIQQGHIPNPMT--YLHIMAAHEKKEELEECIELMEEM 426
Query: 169 DKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK------------------- 209
K G DL+ Y+I + + CK G+ + V+++ EM+ G+
Sbjct: 427 RKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCL 486
Query: 210 ---------------MDVVAYNTV---IRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
+ Y T+ + ++ +E ++ + V+ + GC +V
Sbjct: 487 VEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVYAWT 546
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIR 311
I L NG V+EA + +M G +P T+ R L K L++R I + I
Sbjct: 547 IWIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGLRK------LYNRQIAAEIT 600
Query: 312 PKM 314
K+
Sbjct: 601 EKV 603
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 184/381 (48%), Gaps = 36/381 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY++VI + + D ++ L +M +N +PN T+ + L++EA ++
Sbjct: 198 TYSTVIHGFCRQTKVDTAYKLFRQMVEN-GCMPNLVTYNTLLSGLCRNGLMDEAYELLDE 256
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKN-------VGFSGLV------- 137
+ E GL+ D+ SY L+ LC+ + A ++ F +N N V +S L+
Sbjct: 257 MRERGLQPDKFSYDTLMAGLCKTGKIDMALKV-FEDNSNGDCPPDVVAYSTLIAGLCKAG 315
Query: 138 ----------EMNKTK------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
+M + + ++ G K + ++ E M+ R ++ +YS
Sbjct: 316 RLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYS 375
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+D +CK+G+ A +++K M +GI+ +VV YN++I ++ GVD A+ + EM
Sbjct: 376 SLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTAT 435
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREI 298
GC P ++T NT+I LC+ GR EA + +M K C PDVITY C F LE+
Sbjct: 436 GCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMA 495
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
LFD M++ + P + T+ L+ + G + + ++M CSPD + Y +LVD
Sbjct: 496 RTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDG 555
Query: 359 LIDKGMLDMARKYDEEMFAKG 379
G + AR+ + M +G
Sbjct: 556 FCKVGRMVEARRVLKRMAKRG 576
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 177/373 (47%), Gaps = 18/373 (4%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDN--PSSIPN 66
+D AL FF+W F H TYN + + L + D + H +K+ P PN
Sbjct: 2 SDPDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETC---HILKNGWPPGITPN 58
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCF 125
T+ ++ + + +++A ++ E G + D Y ++ ALC+ ++ +A +
Sbjct: 59 VFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDY-- 116
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
F + + +++ G K + + ++ +M K+G V + +Y++ ++
Sbjct: 117 -------FRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLIN 169
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
CK K +A L KEMK+ G+ +VV Y+TVI VD A +++R+M E GC P
Sbjct: 170 GFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMP 229
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLF 302
++VT NT++ LC NG + EAY +L EM ++G PD +Y L K +I L +F
Sbjct: 230 NLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVF 289
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
+ P + Y L+ + G L +++KM E C PD + AL+D L
Sbjct: 290 EDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKG 349
Query: 363 GMLDMARKYDEEM 375
L A++ E M
Sbjct: 350 DRLQEAQQVLETM 362
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 181/411 (44%), Gaps = 49/411 (11%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
Y+++I L K D + L +M++N S P+ TF + + EA
Sbjct: 303 AYSTLIAGLCKAGRLDEACKLFEKMREN-SCEPDVVTFTALMDGLCKGDRLQEAQQVLET 361
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+++ V +Y +L+D LC+ V +AQE+ K + G +E N YN ++ G
Sbjct: 362 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEV----FKRMIVRG-IEPNVV-TYNSLIHG 415
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK------- 204
+ + EEM G + D+ +Y+ +D +CK+G+ +A +L+ +MK
Sbjct: 416 FCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPD 475
Query: 205 ----------------------------KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
K+ + DVV ++T++ + VD A R+
Sbjct: 476 VITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLE 535
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---E 293
EM C P V T +++ C+ GR+ EA VL M K+GC P+V+TY
Sbjct: 536 EMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAG 595
Query: 294 KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKME-ELGCSPDEFAY 352
KP L + M+ +G++P + TY L+ F G L + +++E + C D FAY
Sbjct: 596 KPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAY 655
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQSG 403
++D L G + A + E + G PR ++ L++G G++ G
Sbjct: 656 RVMMDGLCRTGRMSAALELLEAIKQSG--TPPRHDIYVALIRGLCQGKELG 704
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 174/396 (43%), Gaps = 18/396 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + + A + +E D + T TY+S+ID L K + + + RM P
Sbjct: 347 CKGDRLQEAQQVLETME-DRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIE-P 404
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELC 124
N T+ + + + V+ A+ ++ G L D ++Y L+D LC+ EA L
Sbjct: 405 NVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRL- 463
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
FG+ K F Y+ ++ G+ K+ R +++M K+ V+ D+ ++S +
Sbjct: 464 FGDMK-AKFCN----PDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLV 518
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ C +G A +L +EM DV Y +++ + A RV + M + GCQ
Sbjct: 519 EGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQ 578
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCLEKPREI 298
P+VVT +I C G+ AY +L EM G P+VITY C LE+ R+I
Sbjct: 579 PNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKI 638
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
L +R + + M Y +++ R G + + + +++ G P Y AL+
Sbjct: 639 LERLER--DENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRG 696
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQ 394
L L A + EEM S +P E ++Q
Sbjct: 697 LCQGKELGKAMEVLEEMTLSRKS-RPNAEAYEAVIQ 731
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 110/213 (51%), Gaps = 6/213 (2%)
Query: 172 GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFA 231
G+ ++ +Y++ + +CKSG KA +L +EM++ G D YN VI A+ + A
Sbjct: 54 GITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKA 113
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF--- 288
+ +R M C+ +V+T +I LC+ R+ EA A+M KKG VP+ TY+
Sbjct: 114 LDYFRSME---CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLING 170
Query: 289 FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
F + K L M ESG+ P + TY ++ F R + + ++++M E GC P+
Sbjct: 171 FCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPN 230
Query: 349 EFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
YN L+ L G++D A + +EM +GL
Sbjct: 231 LVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQ 263
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 1/190 (0%)
Query: 193 PWKAVKLYK-EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
P A++ + K++G +V YN + A+ + +D + + G P+V T
Sbjct: 4 PDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYA 63
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIR 311
VI+ LC++G + +A +L EM + G VPD Y+ L K R D
Sbjct: 64 VVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECE 123
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
+ T+ +++ + L + KM++ G P+E+ YN L++ + A
Sbjct: 124 KNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLL 183
Query: 372 DEEMFAKGLS 381
+EM GL+
Sbjct: 184 LKEMKESGLA 193
>gi|115476116|ref|NP_001061654.1| Os08g0369200 [Oryza sativa Japonica Group]
gi|113623623|dbj|BAF23568.1| Os08g0369200 [Oryza sativa Japonica Group]
gi|125603197|gb|EAZ42522.1| hypothetical protein OsJ_27088 [Oryza sativa Japonica Group]
gi|215740653|dbj|BAG97309.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 511
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 186/370 (50%), Gaps = 26/370 (7%)
Query: 28 THTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAM 87
+ D Y++V+D LG+ +FD +W L+ + ++ P TF ++ +RYV A + +A+
Sbjct: 100 SRAADAYDAVVDALGRARQFDAAWRLVVEAAADGAATPR--TFAVLARRYVAAGMTRQAV 157
Query: 88 GTFNKLDEFGLK--DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
F+ ++ F + D + L+D LC+YK+ A E+ F + K E N+ K+Y
Sbjct: 158 RAFDDMEAFVGREPDAAEFTTLLDTLCKYKYPKVAAEV-FNKRKYK-----YEPNE-KMY 210
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK---------- 195
+++ GW K++ ++F ++M G+ ++ +Y+I ++ +C+
Sbjct: 211 TVLIYGWCKVNRNDMAQKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRA 270
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A L KEM ++GI+ +V +Y+ ++ + + + ++R M+E G P+V T +VIK
Sbjct: 271 AEDLLKEMHQRGIEPNVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIK 330
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESG--I 310
L GR+ +A ++L EM +G P TY+CFF+ +++ L L+++M G
Sbjct: 331 CLASCGRLDDAESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPA 390
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
P + TY +LL F + V VW M E PD +Y LV L D A +
Sbjct: 391 TPDIHTYNILLGMFIKLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQ 450
Query: 371 YDEEMFAKGL 380
+ EM +G
Sbjct: 451 FFMEMIERGF 460
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 16/227 (7%)
Query: 172 GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFA 231
G D ++ +D +CK P A +++ + K K + + Y +I D A
Sbjct: 168 GREPDAAEFTTLLDTLCKYKYPKVAAEVFNKRKYK-YEPNEKMYTVLIYGWCKVNRNDMA 226
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGR----------VREAYAVLAEMPKKGCVPD 281
+ ++M G +P++VT N ++ +C + VR A +L EM ++G P+
Sbjct: 227 QKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLKEMHQRGIEPN 286
Query: 282 VITY----HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVW 337
V +Y H + R KP L +F M E GI P + TY +++ G L +
Sbjct: 287 VTSYSVILHVYSRA-HKPELCLCMFRSMKERGICPTVATYTSVIKCLASCGRLDDAESLL 345
Query: 338 KKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
+M G P YN + ++ A + +M A G A P
Sbjct: 346 DEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATP 392
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 96/240 (40%), Gaps = 17/240 (7%)
Query: 65 PNHATFRIMFK---RYVTAH-------LVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEY 114
PN T+ I+ R+ + H V A ++ + G++ V+ +++ +
Sbjct: 240 PNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLKEMHQRGIEPNVTSYSVILHVYSR 299
Query: 115 KHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVV 174
H ELC +++ G+ T Y +++ +EM GV
Sbjct: 300 AH---KPELCLCMFRSMKERGICPTVAT--YTSVIKCLASCGRLDDAESLLDEMASEGVC 354
Query: 175 KDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM--DVVAYNTVIRAVGVSEGVDFAM 232
+Y+ + A++LY +MK G D+ YN ++ D M
Sbjct: 355 PSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHTYNILLGMFIKLNQHDTVM 414
Query: 233 RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
+V+ +M E P + + ++ LC+N + REA EM ++G +P IT+ +R L
Sbjct: 415 QVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQFFMEMIERGFLPQKITFETLYRGL 474
>gi|449469499|ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
gi|449487784|ref|XP_004157799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
Length = 502
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 183/371 (49%), Gaps = 19/371 (5%)
Query: 13 RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
+AL+FF +E + H+ +++ IDI G+ ++ W L+ RM+ P+ TF I
Sbjct: 94 KALQFFKHLEYHPSYAHSASSFDHAIDIAGRMRDYKTVWALVARMRARRIG-PSSKTFAI 152
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNV 131
+ +R+V A + A+ F + E G ++ S+ ++D LC+ K V A F +
Sbjct: 153 IAERFVAAGKPDRAIKVFLSMREHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGK 212
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
+ +V YN+I GW + K E +EM +RG+ + +Y+I + ++G
Sbjct: 213 FKADVVS------YNIIANGWCLIKRTPKALEVLKEMVERGLTPTITTYNILLKGYFRAG 266
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
+ +A + + +MK++ +++DVV Y T++ GV + A +V+ EM G PS T N
Sbjct: 267 QLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEMVGEGILPSTATYN 326
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIES 308
+I++LC+ V A + EM KKG VP++ TY+ R L + + +RM
Sbjct: 327 AMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMDKAMEFIERMKTD 386
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G P + TY + +R F G + +++KM + G P+ YN L+ A+
Sbjct: 387 GCEPNVQTYNVAIRYFCDAGDVEKGLSMFEKMGQ-GSLPNLDTYNVLISAMF-------V 438
Query: 369 RKYDEEMFAKG 379
RK E++ G
Sbjct: 439 RKKSEDLVVAG 449
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
Query: 229 DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH-- 286
D A++V+ MRE GC + + NT++ +LC++ RV AY L ++ + DV++Y+
Sbjct: 164 DRAIKVFLSMREHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNII 223
Query: 287 ----CFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE 342
C + K E+L M+E G+ P + TY +LL+ + R G L+ + + +M+E
Sbjct: 224 ANGWCLIKRTPKALEVL---KEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKE 280
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
D Y +V G + ARK EM +G+
Sbjct: 281 REVEIDVVTYTTMVHGFGVVGEIKRARKVFNEMVGEGI 318
>gi|255543335|ref|XP_002512730.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547741|gb|EEF49233.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 552
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 197/397 (49%), Gaps = 19/397 (4%)
Query: 10 DWKRALEFFNWVET-DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
DWK A F W E C + + ++ ILG +F+ +W +I M +I
Sbjct: 136 DWKLAFLGFKWGEKWGCIDEKSCEL---IVWILGNHRKFNNAWIVIRDMHQLSMNI--QQ 190
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGE 127
T IM RY A +A+ FN +++F + DE ++ +L++ALC + ++ EA+E
Sbjct: 191 TMLIMIDRYAAADNPGKAIEVFNIMEKFKMAPDEEAFYSLMNALCNHGYIEEAEEFMVVN 250
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSW-WGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
K +T+ +N+IL GW + + + W EM K + + SY+ +
Sbjct: 251 KKLFPL-------ETEGFNVILNGWCSICVNLLEAKRVWREMSKCCITPNATSYTHMISC 303
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
K G + +++LY EMKK+G + YN++I + A+R +M+E+G QP
Sbjct: 304 FSKVGNLFDSLRLYDEMKKRGWLPGMEVYNSLIYVLTRENCFKEALRFLDKMKEVGLQPD 363
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE-ILGLFDRM 305
T N++I+ LCE ++ EA +VLA M ++ P + TYH E L + +RM
Sbjct: 364 STTYNSMIRPLCEGKKLVEARSVLATMIEENISPTMETYHALLEVENSDFEATLEVLNRM 423
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
+G+ P DT++++L KF + +W +M++ +P+ Y LV+ L+ G+L
Sbjct: 424 TVAGLAPTDDTFLLVLAKFFKLEQAENALKMWIEMKQYEVTPNLTHYKILVEGLVRCGLL 483
Query: 366 DMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQS 402
AR+ +M + G + P+ + K+++ + G+ S
Sbjct: 484 AKARECYADMRSNGFTDDPKLQ---KMLKEPVRGQNS 517
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 177/391 (45%), Gaps = 13/391 (3%)
Query: 15 LEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
+ FF W + H+ H T +YN ++++L K D + + M +PN T+ +
Sbjct: 1 MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDML-GAGCVPNTYTYGYLL 59
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGF 133
+ A EA F + G V SY L+ LC + V EA EL N
Sbjct: 60 RSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELL-----NEMI 114
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
G + N Y +L G KM + + + M RG D Y++ +D K G
Sbjct: 115 DGGHQPNVVT-YGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDM 173
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
+A +L++EM +KG V YN+++ ++++M GC P++ T N +
Sbjct: 174 GEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNL 233
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGI 310
+ C+ G + EA+ + EM GC PDV++Y+ R + KP E L MI SG+
Sbjct: 234 LDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGV 293
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
P + +Y +L+ + + G L ++ ++ + G PD F+Y+ ++D L G + A
Sbjct: 294 GPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFV 353
Query: 371 YDEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
++M A G + P + LV G GE+
Sbjct: 354 VFKDMIANG--SAPDAAVVIPLVIGLCRGER 382
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 163/379 (43%), Gaps = 25/379 (6%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM--KDNPSS 63
C A E N + H + TY S++ L K + + +L RM + P
Sbjct: 98 CRGQKVDEAAELLNEMIDGGHQPNVV-TYGSLLSGLCKMGKLKEAVDLFSRMVYRGCP-- 154
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQE 122
P+ + ++ + + EA F ++ E G V +Y +L+ Q
Sbjct: 155 -PDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQS 213
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L K++ G V T +N +L G+ KM + + EM G D+ SY+
Sbjct: 214 L----FKDMLRQGCVPNIFT--FNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNT 267
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
M MC GKP +A +L +EM + G+ D+V+YN +I S +D A++++ E+ + G
Sbjct: 268 LMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSG 327
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREIL 299
+P + +T+I LC G+V A+ V +M G PD L E+ E
Sbjct: 328 LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESC 387
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
LF M++ P + Y +L+ K + V ++ ++ E G SP D
Sbjct: 388 ELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSP---------DVE 438
Query: 360 IDKGMLDMARKYDEEMFAK 378
I K +L+ R+ D++ A+
Sbjct: 439 ISKVILETLRRSDDKEAAE 457
>gi|115455503|ref|NP_001051352.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|14488357|gb|AAK63924.1|AC084282_5 unknown protein [Oryza sativa Japonica Group]
gi|108711214|gb|ABF99009.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549823|dbj|BAF13266.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|125545804|gb|EAY91943.1| hypothetical protein OsI_13630 [Oryza sativa Indica Group]
gi|125588003|gb|EAZ28667.1| hypothetical protein OsJ_12678 [Oryza sativa Japonica Group]
Length = 484
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 185/373 (49%), Gaps = 16/373 (4%)
Query: 14 ALEFFNWV--ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
A FF W + HT +Y++V+ L K ++ L W+++ M+ + N TF
Sbjct: 82 AYRFFEWARRQKRGGCAHTVRSYHTVVASLAKIRQYQLMWDVVAVMRREGAV--NVETFG 139
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKN 130
I+ ++Y A V+EA+ TFN ++++G+ ++ N L+ ALC+ K+V +AQE+ + N
Sbjct: 140 IIMRKYARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIF--DKMN 197
Query: 131 VGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS 190
FS K Y+++L GW + K RE + EM G D+ +Y I +D +CK+
Sbjct: 198 SRFS-----PDAKTYSILLEGWGRAPNLPKMREVYSEMLDAGCEPDIVTYGIMVDSLCKT 252
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTC 250
G+ +AV++ ++M +G + Y+ ++ GV ++ A+ + +M + G P +V
Sbjct: 253 GRVEEAVRVVQDMTSRGCQPTTYIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDIVVY 312
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR---CLEKPREILGLFDRMIE 307
N ++ C+ + A+ VL +M G + T++ L + E +F RMI+
Sbjct: 313 NALVSAFCKAKKFENAFRVLNDMEGHGITTNSRTWNIILNHLISLGRDDEAYKVFRRMIK 372
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
+P DTY M+++ F + VWK M P ++ L++ L DK +
Sbjct: 373 C-CQPDCDTYTMMIKMFCENDKVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKREVSQ 431
Query: 368 ARKYDEEMFAKGL 380
A E+M KG+
Sbjct: 432 ACVLLEDMIEKGI 444
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 108/249 (43%), Gaps = 5/249 (2%)
Query: 140 NKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKL 199
+ + Y+ ++ K+ + + M + G V ++ ++ I M ++ K +AV
Sbjct: 99 HTVRSYHTVVASLAKIRQYQLMWDVVAVMRREGAV-NVETFGIIMRKYARAQKVDEAVYT 157
Query: 200 YKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCE 259
+ M+K G+ ++ A+N+++ A+ S+ V A ++ +M P T + +++
Sbjct: 158 FNVMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNSR-FSPDAKTYSILLEGWGR 216
Query: 260 NGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDT 316
+ + V +EM GC PD++TY L K E + + M G +P
Sbjct: 217 APNLPKMREVYSEMLDAGCEPDIVTYGIMVDSLCKTGRVEEAVRVVQDMTSRGCQPTTYI 276
Query: 317 YVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
Y +L+ +G + + ME+ G PD YNALV A + A + +M
Sbjct: 277 YSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDIVVYNALVSAFCKAKKFENAFRVLNDME 336
Query: 377 AKGLSAKPR 385
G++ R
Sbjct: 337 GHGITTNSR 345
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 120/280 (42%), Gaps = 9/280 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + + ++A E F+ + + F+ TY+ +++ G+ + M D P
Sbjct: 181 CKSKNVRKAQEIFD--KMNSRFSPDAKTYSILLEGWGRAPNLPKMREVYSEMLDAGCE-P 237
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCF 125
+ T+ IM V EA+ + G + +++ + IE F
Sbjct: 238 DIVTYGIMVDSLCKTGRVEEAVRVVQDMTSRGCQPTTYIYSVLVHTYGVEMRIEDAVATF 297
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
+ + G + +YN ++ + K + +M+ G+ + +++I ++
Sbjct: 298 LDMEKDGI-----VPDIVVYNALVSAFCKAKKFENAFRVLNDMEGHGITTNSRTWNIILN 352
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
+ G+ +A K+++ M K + D Y +I+ ++ V+ A++V++ MR P
Sbjct: 353 HLISLGRDDEAYKVFRRMIK-CCQPDCDTYTMMIKMFCENDKVEMALKVWKYMRLKQFLP 411
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
S+ T + +I LC+ V +A +L +M +KG P T+
Sbjct: 412 SMHTFSVLINGLCDKREVSQACVLLEDMIEKGIRPPGSTF 451
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 177/391 (45%), Gaps = 13/391 (3%)
Query: 15 LEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
+ FF W + H+ H T +YN ++++L K D + + M +PN T+ +
Sbjct: 1 MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDML-AAGCVPNTYTYGYLL 59
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGF 133
+ A EA F + G V SY L+ LC + V EA EL N
Sbjct: 60 RSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELL-----NEMI 114
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
G + N Y +L G KM + + + M RG D Y++ +D K G
Sbjct: 115 DGGHQPNVVT-YGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDM 173
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
+A +L++EM +KG V YN+++ ++++M GC P++ T N +
Sbjct: 174 GEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNL 233
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGI 310
+ C+ G + EA+ + EM GC PDV++Y+ R + KP E L MI SG+
Sbjct: 234 LDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGV 293
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
P + +Y +L+ + + G L ++ ++ + G PD F+Y+ ++D L G + A
Sbjct: 294 GPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFV 353
Query: 371 YDEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
++M A G + P + LV G GE+
Sbjct: 354 VFKDMIANG--SAPDAAVVIPLVIGLCRGER 382
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 161/375 (42%), Gaps = 25/375 (6%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM--KDNPSS 63
C A E N + H + TY S++ L K + + +L RM + P
Sbjct: 98 CRGQKVDEAAELLNEMIDGGHQPNVV-TYGSLLSGLCKMGKLKEAVDLFSRMVYRGCP-- 154
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQE 122
P+ + ++ + + EA F ++ E G V +Y +L+ Q
Sbjct: 155 -PDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQS 213
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L K++ G V T +N +L G+ KM + + EM G D+ SY+
Sbjct: 214 L----FKDMLRQGCVPNIFT--FNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNT 267
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ MC GKP +A +L +EM + G+ D+V+YN +I S +D A++++ E+ + G
Sbjct: 268 LIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSG 327
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREIL 299
+P + +T+I LC G+V A+ V +M G PD L E+ E
Sbjct: 328 LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESC 387
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
LF M++ P + Y +L+ K + V ++ ++ E G SP D
Sbjct: 388 ELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSP---------DVE 438
Query: 360 IDKGMLDMARKYDEE 374
I K +L+ R+ D++
Sbjct: 439 ISKVILETLRRSDDK 453
>gi|297797613|ref|XP_002866691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312526|gb|EFH42950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 638
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 187/374 (50%), Gaps = 13/374 (3%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSIPNHATFRIMFK 75
FF W + H+ + Y S++ IL K +F W LI M K+NP I F ++ +
Sbjct: 134 FFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPE-LFVVLVQ 192
Query: 76 RYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFS 134
R+ +A +V +A+ +++ FGL+ DE + L+DALC++ V +A +L E+ + F
Sbjct: 193 RFASADMVKKAIEVLDEMPTFGLEPDEYVFGCLLDALCKHGSVKDAAKLF--EDMRLRFP 250
Query: 135 GLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPW 194
+ + +L GW + + + +M + G D+ Y+ + +GK
Sbjct: 251 -----VNLRYFTSLLYGWCREEKMMEAKYVLVQMKEAGFEPDIVDYTNLLSGYANAGKMA 305
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
A L K+M+++G + + Y +I+A+ + ++ AM+V+ EM C+ VVT ++
Sbjct: 306 DAYDLLKDMRRRGFEPNATCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALV 365
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIR 311
C+ G++ + Y VL +M KKG +P +TY EK E L L ++M +
Sbjct: 366 SGFCKWGKIDKCYLVLDDMIKKGLMPSQLTYMHIMAAHEKKEKLIECLELMEKMKQIEYH 425
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
P + Y +++R + G ++ +W +ME G SP + +++ L +G L A +
Sbjct: 426 PDIGIYNVVIRLACKLGEVKEAVRLWNEMEGNGLSPGADTFVIIINGLTSQGCLLEACDH 485
Query: 372 DEEMFAKGLSAKPR 385
+EM A+GL + P+
Sbjct: 486 FKEMVARGLFSVPQ 499
>gi|356549210|ref|XP_003542990.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Glycine max]
Length = 648
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 186/385 (48%), Gaps = 13/385 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+ L + + K A FF W F H + TYN ++ +LG+ +F+ ++ M +
Sbjct: 209 DVLQRFKHARKPAFRFFCWAGKRPGFAHDSRTYNFMMCVLGRTRQFETMVAMLEEMGEK- 267
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
+ TF I K + A +A+G F+ + ++G K V N L+D+L K EA
Sbjct: 268 -GLLTMETFSIAIKAFAEAKQRKKAVGIFDLMKKYGFKVGVDVINFLLDSLSTAKLGKEA 326
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
Q + F + K+ L + Y ++L GW ++ + W EM RG D+ ++
Sbjct: 327 QAV-FEKLKDRFTPSL------QTYTILLSGWCRLKNLLEAGRVWNEMIDRGFNPDVVAH 379
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
++ ++ + K K A+KL++ MK KG +V +Y +I+ + + A+ + M +
Sbjct: 380 NVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGEAIEYFDVMVD 439
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PRE 297
GCQP +I ++ Y++L EM ++GC PD TY+ + + P +
Sbjct: 440 RGCQPDAALYTCLITGFGRQKKMDMVYSLLKEMRERGCPPDGRTYNALIKLMTSQHMPDD 499
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ ++ +MI+SGI+P + TY M+++ + +W +M + GC PD+ +Y +
Sbjct: 500 AVRIYKKMIQSGIKPTIHTYNMIMKSYFVTKNYEMGHEIWDEMHQKGCCPDDNSYIVYIG 559
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSA 382
LI + A KY EEM KG+ A
Sbjct: 560 GLIRQDRSGEACKYLEEMLEKGMKA 584
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 94/230 (40%), Gaps = 44/230 (19%)
Query: 14 ALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
A+E+F+ V+ C Y +I G+ + D+ ++L+ M++ P+ T+
Sbjct: 430 AIEYFDVMVDRGCQ--PDAALYTCLITGFGRQKKMDMVYSLLKEMRER-GCPPDGRTYNA 486
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
+ K + H+ ++A+ + K+ + G+K +
Sbjct: 487 LIKLMTSQHMPDDAVRIYKKMIQSGIKPTI------------------------------ 516
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
YNMI++ +F + E W+EM ++G D +SY +Y+ + + +
Sbjct: 517 ----------HTYNMIMKSYFVTKNYEMGHEIWDEMHQKGCCPDDNSYIVYIGGLIRQDR 566
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+A K +EM +KG+K + YN + + + R+M +G
Sbjct: 567 SGEACKYLEEMLEKGMKAPKLDYNKFASDISKTGNAVILEELARKMNFVG 616
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 5/186 (2%)
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
K+ G D YN ++ +G + + + + EM E G ++ T + IK E +
Sbjct: 230 KRPGFAHDSRTYNFMMCVLGRTRQFETMVAMLEEMGEKGLL-TMETFSIAIKAFAEAKQR 288
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVML 320
++A + M K G V + L + E +F+++ + P + TY +L
Sbjct: 289 KKAVGIFDLMKKYGFKVGVDVINFLLDSLSTAKLGKEAQAVFEKL-KDRFTPSLQTYTIL 347
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
L + R L VW +M + G +PD A+N +++ L+ A K E M AKG
Sbjct: 348 LSGWCRLKNLLEAGRVWNEMIDRGFNPDVVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGP 407
Query: 381 SAKPRE 386
S R
Sbjct: 408 SPNVRS 413
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 180/380 (47%), Gaps = 12/380 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + A++ F T+ T TY +++D L K + + L+ ++ N + P
Sbjct: 141 CKSGKVLAAMDHFETTTTN-GCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCT-P 198
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELC 124
AT+ + + EA+ K+ + G D V+Y +L+D L + K EA +L
Sbjct: 199 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL- 257
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
K + GLV T Y ++RG + + ++ M +G V D+ + S +
Sbjct: 258 ---FKEMALRGLVL--DTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMI 312
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D +CK+G+ AV+++K M+ +G+ + V Y+ +I + + +D A+ + +M++ C
Sbjct: 313 DGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCT 372
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGL 301
P +T N +I LC++G V A A EM + GC PDV TY+ K G+
Sbjct: 373 PDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGV 432
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
FD M S P + TY L+ + L + ++ M+E GC PD F Y++LVD L
Sbjct: 433 FDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCK 492
Query: 362 KGMLDMARKYDEEMFAKGLS 381
G L+ +EM G++
Sbjct: 493 SGKLEGGCMLFDEMERSGVA 512
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 114/237 (48%), Gaps = 8/237 (3%)
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
RE E+ GV L ++++ + +CKSGK A+ ++ G +D+ Y ++
Sbjct: 118 REMEEDY---GVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDW 174
Query: 222 VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
+ ++ + A+ + ++ GC P++ T N ++ LC+ GR+ EA +L ++ GC PD
Sbjct: 175 LAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPD 234
Query: 282 VITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWK 338
V+TY L K + E LF M G+ Y L+R + G + V+K
Sbjct: 235 VVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYK 294
Query: 339 KMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
M GC PD + ++D L G + A + + M A+GL+ P E + + L+ G
Sbjct: 295 TMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLA--PNEVVYSALIHG 349
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 146/353 (41%), Gaps = 45/353 (12%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F H+ T N+++D+ + + NL+ + + + +P+ T+ ++ Y A EA
Sbjct: 55 FQHSVHTGNALLDVFARTKRHREAGNLL-KNELATTFLPDVETWNVLITGYCLAREPEEA 113
Query: 87 MGTFNKLDE-FGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
+++E +G+ + K +
Sbjct: 114 FAVIREMEEDYGVAPSL----------------------------------------KTH 133
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N++L G K + +E G D+H+Y+ +D + K+ K AV L +++
Sbjct: 134 NLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITA 193
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G + YN ++ + ++ A+ + R++ + GC P VVT ++I L + R E
Sbjct: 194 NGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFE 253
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLR 322
AY + EM +G V D + Y R L + +I ++ M G P + T ++
Sbjct: 254 AYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMID 313
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
+ G + ++K ME G +P+E Y+AL+ L +D A + +M
Sbjct: 314 GLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 366
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 113/287 (39%), Gaps = 56/287 (19%)
Query: 54 IHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALC 112
+++ + +P+ T M A + A+ F ++ GL +EV Y L+ LC
Sbjct: 292 VYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC 351
Query: 113 EYKHVIEAQELCFGENKNVGFSGLVEMNK------TKIYNMILRGWFKMSWWGKCREFWE 166
+ + + A E+ L +M K T YN+++ G K R F++
Sbjct: 352 KARKMDCALEM------------LAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFD 399
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKP--------------------------------- 193
EM + G D+++Y+I + CK+G
Sbjct: 400 EMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRR 459
Query: 194 --WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
KA ++ MK++G D Y++++ + S ++ ++ EM G S T
Sbjct: 460 QLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANS-QTRT 518
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI 298
+I LC+ RV EA ++ + K+G +P Y+ L K ++
Sbjct: 519 RLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISTLIKSAKV 564
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 75/178 (42%), Gaps = 12/178 (6%)
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMRE--MGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
++ + V++ + D A +++ + G Q SV T N ++ + R REA +L
Sbjct: 23 ISTDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLL 82
Query: 271 AEMPKKGCVPDV------ITYHCFFRCLEKPREILGLFDRMIES-GIRPKMDTYVMLLRK 323
+PDV IT +C R +P E + M E G+ P + T+ ++L
Sbjct: 83 KNELATTFLPDVETWNVLITGYCLAR---EPEEAFAVIREMEEDYGVAPSLKTHNLVLHG 139
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ G + ++ GC+ D Y A+VD L + A E++ A G +
Sbjct: 140 LCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCT 197
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 186/389 (47%), Gaps = 11/389 (2%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKR 76
FF W + H+ + Y ++I LGK +F W LI M+ + F ++ +R
Sbjct: 150 FFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRR 209
Query: 77 YVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSG 135
+ + +V +A+ +++ ++G + DE + L+DALC+ V EA L E+ V F+
Sbjct: 210 FASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLF--EDMRVRFN- 266
Query: 136 LVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK 195
+ + +L GW + + + ++ + G D+ Y+ + ++GK
Sbjct: 267 ----PNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRD 322
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A L EMKK + ++ +I++ +E +D AMR++ EM+ GC+ VVT T+I
Sbjct: 323 AFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLIS 382
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRP 312
C+ G +AY +L +M +KG P ++Y C EK E+ + L + M + G P
Sbjct: 383 GFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVP 442
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
++ Y ++R + G L+ +W +M+ G +P Y +V + +G L A Y
Sbjct: 443 DLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYF 502
Query: 373 EEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
+EM +GL + P+ +L L E+
Sbjct: 503 KEMVERGLLSAPQYGTLKELTNALLRAEK 531
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 131/323 (40%), Gaps = 57/323 (17%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
YN+++ + + +++L+ MK + PN A+F I+ + + ++EAM F +
Sbjct: 306 VYNNLLGGYAQAGKMRDAFDLLAEMK-KVNCGPNAASFTILIQSFCKTEKMDEAMRIFTE 364
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI---YNMI 148
+ G + D V+Y L+ C++ + +A E+ +++ Y I
Sbjct: 365 MQGSGCEADVVTYTTLISGFCKWGNTDKAYEI---------LDDMIQKGHDPSQLSYLCI 415
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ K +C E EEM K G V DL+ Y+ + ++CK G +AV+L+ EM+ G+
Sbjct: 416 MMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGL 475
Query: 209 KMDVVAYNTVIR-------------------------------------AVGVSEGVDFA 231
+ Y ++ A+ +E ++ A
Sbjct: 476 NPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMA 535
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC 291
++ M GC+ +V I L NG V+EA + +M +P T+ R
Sbjct: 536 KNMWSCMTTKGCELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRG 595
Query: 292 LEKPREILGLFDRMIESGIRPKM 314
L+K LF R + I K+
Sbjct: 596 LKK------LFHRQLAVEITEKV 612
>gi|308082018|ref|NP_001183846.1| uncharacterized protein LOC100502439 [Zea mays]
gi|238014984|gb|ACR38527.1| unknown [Zea mays]
gi|414872746|tpg|DAA51303.1| TPA: hypothetical protein ZEAMMB73_971718 [Zea mays]
Length = 623
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 184/386 (47%), Gaps = 12/386 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+ LS ++NDW A FF W T + H D+Y+ ++DILGKF +FDL LI +M +
Sbjct: 168 KVLSRFSNDWVAAFGFFMWAGTQEGYCHCADSYDMMVDILGKFKQFDLMCGLIGQMHE-I 226
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
+ + AT + +R A+ ++A+ F+K+D FG+ + N L+D LC+ + V A
Sbjct: 227 GGLVSLATMTKVMRRLCGANRWSDAIDAFHKMDRFGVAKDTKAMNVLLDTLCKERSVKRA 286
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+ G + +++ +N ++ GW K + RE +EM++ G + +Y
Sbjct: 287 R------GAFQALKGTIPPDESS-FNTLVHGWCKARMLKEARETMKEMERHGFSPSVTTY 339
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ ++ C + EM KG +++ Y V+ A+G + A+ + ++++
Sbjct: 340 TCLIEAYCMEKDFQTVDGILDEMHTKGCTPNIITYTIVMHALGKAGRTQEALDTFDKVKQ 399
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPRE- 297
GC N +I +LC GR+++A V+ EM + G P++ T++ C E
Sbjct: 400 DGCALDASFYNCLIYILCRAGRLQDANFVVEEMHRTGISPNLTTFNTLISAACDHSLAEN 459
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
L L +M E P + TY LL+ R +++ + + M +PD Y LV
Sbjct: 460 ALKLLVQMEEQSCNPDIKTYTPLLKLCCRRKWVKTLLFLICHMFRKDITPDFSTYTLLVC 519
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAK 383
L G L + + EEM KG + +
Sbjct: 520 WLCRNGRLTQSCLFLEEMVLKGFTPQ 545
>gi|326504802|dbj|BAK06692.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 189/387 (48%), Gaps = 28/387 (7%)
Query: 12 KRALEFFNWVETDCHFTH--TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
K AL N V + D Y++V+D LG+ +FD +W L+ + ++ P T
Sbjct: 93 KLALSLLNAVRLHPSVSSPPNADAYDAVVDALGRAHQFDAAWRLVVEAAADGAATPR--T 150
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLK--DEVSYCNLVDALCEYKHVIEAQELCFGE 127
F ++ +RYV A L +A+ F+ ++ F + D + L+D LC+YK+ A E+ F +
Sbjct: 151 FAVLARRYVAAGLTRQAVRAFDDMEAFLGREPDAQEFTTLLDTLCKYKYPKVAVEV-FNK 209
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
K E N+ K+Y +++ GW K++ ++F ++M G+ ++ +Y+I ++ +
Sbjct: 210 RKYK-----YEPNE-KMYTILIYGWCKVNRSDMAQKFLKDMIDHGIEPNIVTYNILLNGI 263
Query: 188 CKSGKPWK----------AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
C+ A L KEM +GI+ DV +Y+ ++ + + + ++R
Sbjct: 264 CRHASLHPDNRFDRTVNAAENLLKEMNDRGIEPDVTSYSIILHVYSRAHKAELCLCMFRS 323
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
M++ G P+V T +VIK L GR+ +A ++L EM +G P TY+CFF+ ++
Sbjct: 324 MKDRGICPTVATYTSVIKCLASCGRLEDAESLLGEMVSEGVCPSPATYNCFFKEYRGRKD 383
Query: 298 ILG---LFDRMIE--SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
+ G L+++M S P + +Y +LL F + V +W M E PD +Y
Sbjct: 384 VSGALELYNKMKAPCSPTAPDIHSYNILLGMFIKLDRHETVMELWNDMCERAVGPDLDSY 443
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKG 379
LV K A ++ EM KG
Sbjct: 444 TLLVHGFCAKEKWREACQFFMEMIEKG 470
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 35/204 (17%)
Query: 52 NLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDA 110
NL+ M D P+ ++ I+ Y AH + F + + G+ V +Y +++
Sbjct: 284 NLLKEMNDRGIE-PDVTSYSIILHVYSRAHKAELCLCMFRSMKDRGICPTVATYTSVIKC 342
Query: 111 LCEYKHVIEAQELCFGENKNVGF--------------------SGLVEM-NKTKI----- 144
L + +A+ L GE + G SG +E+ NK K
Sbjct: 343 LASCGRLEDAESL-LGEMVSEGVCPSPATYNCFFKEYRGRKDVSGALELYNKMKAPCSPT 401
Query: 145 ------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK 198
YN++L + K+ E W +M +R V DL SY++ + C K +A +
Sbjct: 402 APDIHSYNILLGMFIKLDRHETVMELWNDMCERAVGPDLDSYTLLVHGFCAKEKWREACQ 461
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAV 222
+ EM +KG + + T R +
Sbjct: 462 FFMEMIEKGFLPQKITFETPYRGL 485
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 100/273 (36%), Gaps = 48/273 (17%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQEL 123
PN + I+ + + + A + + G++ V+Y L++ +C +H +
Sbjct: 216 PNEKMYTILIYGWCKVNRSDMAQKFLKDMIDHGIEPNIVTYNILLNGIC--RHASLHPDN 273
Query: 124 CFGENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
F N + L EMN I Y++IL + + C + M RG+ +
Sbjct: 274 RFDRTVNAAENLLKEMNDRGIEPDVTSYSIILHVYSRAHKAELCLCMFRSMKDRGICPTV 333
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
+Y+ + + G+ A L EM +G+ YN + + V A+ +Y +
Sbjct: 334 ATYTSVIKCLASCGRLEDAESLLGEMVSEGVCPSPATYNCFFKEYRGRKDVSGALELYNK 393
Query: 238 MREMGCQPSVVTCN----------------TVIKL----------------------LCE 259
M+ C P+ + TV++L C
Sbjct: 394 MKA-PCSPTAPDIHSYNILLGMFIKLDRHETVMELWNDMCERAVGPDLDSYTLLVHGFCA 452
Query: 260 NGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
+ REA EM +KG +P IT+ +R L
Sbjct: 453 KEKWREACQFFMEMIEKGFLPQKITFETPYRGL 485
>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 492
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 188/384 (48%), Gaps = 21/384 (5%)
Query: 2 ETLSCYANDWKRALEFFNWVETDC-HFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDN 60
+TL N +AL FF ++ +TH+ +++ +DI + +F+ +W L+ RM+
Sbjct: 71 KTLKRLWNHGPKALLFFKHLDRHLPSYTHSPSSFDHAVDIAARMRDFNSAWALVGRMRSL 130
Query: 61 PSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIE 119
P+ T I+ +RY + + A+ TF + E GL ++ S+ L+D LC+ V
Sbjct: 131 RLG-PSPKTLAILAERYASIGKPHRAVRTFLSMHEHGLHQDLHSFNTLLDILCKSNRVET 189
Query: 120 AQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
A +L T YN++ G+ +EM +RG+ + +
Sbjct: 190 AHDLLRTLKSRF-------RPDTVSYNILANGYCLKKRTPMALRVLKEMVQRGIEPTMVT 242
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y+ + +S + +A + Y EMKK+ ++DVV+Y TVI G + V A RV+ EM
Sbjct: 243 YNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMV 302
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG-CVPDVITYHCFFRCLEKPREI 298
+ G P+V T N +I++ C+ V+ A AV EM ++G C P+V+T++ R L ++
Sbjct: 303 KEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEMVREGVCSPNVVTFNVVIRGLCHVGDM 362
Query: 299 ---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
LG +RM E G+R + TY +++R F G + V+ KM + C P+ YN L
Sbjct: 363 ERALGFMERMGEHGLRASVQTYNVVIRYFCDAGEIEKGLEVFGKMGDGLCLPNLDTYNVL 422
Query: 356 VDALIDKGMLDMARKYDEEMFAKG 379
+ A+ RK E++ G
Sbjct: 423 ISAMF-------VRKKSEDLVVAG 439
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 33/214 (15%)
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
M + G+ +DLHS++ +DI+CKS + A L + +K + + D V+YN + + +
Sbjct: 161 SMHEHGLHQDLHSFNTLLDILCKSNRVETAHDLLRTLKSR-FRPDTVSYNILANGYCLKK 219
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
A+RV +EM + G +P++VT NT++K + +++EA+ EM K+ C DV++Y
Sbjct: 220 RTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSY- 278
Query: 287 CFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
++ FG G ++ V+ +M + G +
Sbjct: 279 -------------------------------TTVIHGFGEAGEVKKAKRVFDEMVKEGVA 307
Query: 347 PDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
P+ YNAL+ K + A EEM +G+
Sbjct: 308 PNVATYNALIQVFCKKDSVQNAVAVFEEMVREGV 341
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 186/389 (47%), Gaps = 11/389 (2%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKR 76
FF W + H+ + Y ++I LGK +F W LI M+ + F ++ +R
Sbjct: 127 FFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRR 186
Query: 77 YVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSG 135
+ + +V +A+ +++ ++G + DE + L+DALC+ V EA L E+ V F+
Sbjct: 187 FASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLF--EDMRVRFN- 243
Query: 136 LVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK 195
+ + +L GW + + + ++ + G D+ Y+ + ++GK
Sbjct: 244 ----PNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRD 299
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A L EMKK + ++ +I++ +E +D AMR++ EM+ GC+ VVT T+I
Sbjct: 300 AFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLIS 359
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRP 312
C+ G +AY +L +M +KG P ++Y C EK E+ + L + M + G P
Sbjct: 360 GFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVP 419
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
++ Y ++R + G L+ +W +M+ G +P Y +V + +G L A Y
Sbjct: 420 DLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYF 479
Query: 373 EEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
+EM +GL + P+ +L L E+
Sbjct: 480 KEMVERGLLSAPQYGTLKELTNALLRAEK 508
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 131/323 (40%), Gaps = 57/323 (17%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
YN+++ + + +++L+ MK + PN A+F I+ + + ++EAM F +
Sbjct: 283 VYNNLLGGYAQAGKMRDAFDLLAEMK-KVNCGPNAASFTILIQSFCKTEKMDEAMRIFTE 341
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI---YNMI 148
+ G + D V+Y L+ C++ + +A E+ +++ Y I
Sbjct: 342 MQGSGCEADVVTYTTLISGFCKWGNTDKAYEI---------LDDMIQKGHDPSQLSYLCI 392
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ K +C E EEM K G V DL+ Y+ + ++CK G +AV+L+ EM+ G+
Sbjct: 393 MMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGL 452
Query: 209 KMDVVAYNTVIR-------------------------------------AVGVSEGVDFA 231
+ Y ++ A+ +E ++ A
Sbjct: 453 NPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMA 512
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC 291
++ M GC+ +V I L NG V+EA + +M +P T+ R
Sbjct: 513 KNMWSCMTTKGCELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRG 572
Query: 292 LEKPREILGLFDRMIESGIRPKM 314
L+K LF R + I K+
Sbjct: 573 LKK------LFHRQLAVEITEKV 589
>gi|357115308|ref|XP_003559432.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Brachypodium distachyon]
Length = 570
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 181/381 (47%), Gaps = 12/381 (3%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+ +DW A FF W + H D YN ++DILGKF +FDL W LI +M D + +
Sbjct: 136 FGSDWVAAFGFFMWAGAQEGYCHHADLYNLMVDILGKFKQFDLLWGLIRQM-DEIGCLVS 194
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCF 125
AT + +R A+ +A+ FNK+D+FG ++D + L+D LC+ K V A+ + F
Sbjct: 195 LATMTKVMRRLAGANRWTDAIDAFNKMDQFGVVRDTKAMNALLDTLCKEKSVKRARGV-F 253
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
E G+V +++ +N ++ GW + + R+ +EM++ G + +Y+ ++
Sbjct: 254 QE-----LRGVVPPDESS-FNTLVHGWCQARMLNEARDTMKEMEEHGFSPSVITYTSLIE 307
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
C + EM KG + +V+ Y V+ A+G + A+ V+ +++ GC P
Sbjct: 308 AYCMEKDFQTVYAILNEMCSKGCRPNVITYTIVMHALGKAGRTQEALDVFDKVKRDGCVP 367
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLF 302
N++I +L GR+ +A +V EM + G P V ++ + L +
Sbjct: 368 DASFYNSIIYILGRAGRLEDANSVFDEMCRTGIPPTVAIFNTMISAACDHSQAENALKIL 427
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
+M E +P + TY LL+ + +++ + + M SPD Y LV L
Sbjct: 428 VKMEEQSCKPDIKTYTPLLKLCCKRQWMKILPFLICHMFRKDISPDFSTYILLVTWLCRN 487
Query: 363 GMLDMARKYDEEMFAKGLSAK 383
G + + EEM KG K
Sbjct: 488 GKPAQSCLFLEEMVLKGFMPK 508
>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 186/376 (49%), Gaps = 16/376 (4%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKR 76
FF W + H+ + S++ IL K +F W LI M+ + F ++ +R
Sbjct: 117 FFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRR 176
Query: 77 YVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSG 135
+ +A++V +A+ +++ ++GL+ DE + L+DALC+ V EA ++ F
Sbjct: 177 FASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKV---------FED 227
Query: 136 LVEM--NKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
+ E + + +L GW + + +E +M + G+ D+ ++ + +GK
Sbjct: 228 MREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKM 287
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG-VDFAMRVYREMREMGCQPSVVTCNT 252
A L +M+K+G + +V Y +I+A+ +E +D AMRV+ EM GC+ +VT
Sbjct: 288 ADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTA 347
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESG 309
+I C+ G + + Y+VL +M KKG +P +TY EK E L L ++M G
Sbjct: 348 LISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRG 407
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
P + Y +++R + G ++ +W +ME G SP + +++ +G L A
Sbjct: 408 CHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEAC 467
Query: 370 KYDEEMFAKGLSAKPR 385
+ +EM ++G+ + P+
Sbjct: 468 NHFKEMVSRGIFSAPQ 483
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 132/346 (38%), Gaps = 85/346 (24%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKR 76
F N + H D Y+ + D+ + FE PN + ++ +
Sbjct: 274 FTNLLSGYAHAGKMADAYDLMNDMRKRGFE------------------PNVNCYTVLIQA 315
Query: 77 YV-TAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFS 134
T ++EAM F +++ +G + D V+Y L+ C++ + + G+S
Sbjct: 316 LCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMI------------DKGYS 363
Query: 135 GLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
L +M K + Y I+ K + +C E E+M +RG DL Y++ + + C
Sbjct: 364 VLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLAC 423
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG---------------VSEGVDFAMR 233
K G+ +AV+L+ EM+ G+ V + +I VS G+ F+
Sbjct: 424 KLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI-FSAP 482
Query: 234 VYREMREM-------------------------GCQPSVVTCNTVIKLLCENGRVREAYA 268
Y ++ + C+ +V I L G V+EA +
Sbjct: 483 QYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACS 542
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKM 314
+M + +P TY + L K L++R I + I K+
Sbjct: 543 YCLDMMEMDLMPQPNTYAKLMKGLNK------LYNRTIAAEITEKV 582
>gi|449511317|ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Cucumis sativus]
Length = 495
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 186/373 (49%), Gaps = 18/373 (4%)
Query: 13 RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
+ALEFFN+ F HT+ + ++++ ILG+ +FD W+++ +K S+ + T +
Sbjct: 90 QALEFFNYTAKRRGFYHTSFSVDTMLYILGRSRKFDKIWDVLLDVKFKDPSLISLRTVMV 149
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNV 131
+ R V + + +F K +F + +V+ N L+ LC+ K +++A+ +
Sbjct: 150 VLGRIAKVCSVRQTVESFRKFKKFVPEFDVTCFNALLRTLCQEKSMMDARNV-------- 201
Query: 132 GFSGLVEMNKTKI--YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
+ GL M + + +N++L GW K S + F++EM + GV D+ SY+ +D+ CK
Sbjct: 202 -YHGLKSMFRPNLQTFNILLSGW-KSS--EEAEGFFDEMIEMGVKPDVVSYNCLVDVYCK 257
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
+ + KA K+ +M+ + I DV+ Y ++I +G+ D A + +EM+E GC P V
Sbjct: 258 NREMDKAFKVVGKMRDEDIPADVITYTSIIGGLGLVGQPDKARNILKEMKEYGCYPDVAA 317
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMI 306
N I+ C R+ EA+ +L EM KG P+ TY+ FFR + L+ RM+
Sbjct: 318 YNATIRNFCIAKRLHEAFDLLDEMVNKGLSPNATTYNLFFRIFFWSNDLQSAWNLYRRMM 377
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
++G P + + L+R F ++ +W M + G L D L D G L
Sbjct: 378 DTGCLPNTQSCLFLVRLFKKYEKEEMALELWNDMIQKGFGSYILVSEELFDLLCDLGKLI 437
Query: 367 MARKYDEEMFAKG 379
A +M KG
Sbjct: 438 EAESCFLQMVDKG 450
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 182/370 (49%), Gaps = 13/370 (3%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T T+N++I+ L K +F + L M P+ T+ + A G
Sbjct: 191 TIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQ-PDVHTYTTIINGLCKIGETVAAAGL 249
Query: 90 FNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
F K+ E G + D V+Y ++D+LC+ + V EA ++ F K G S YN +
Sbjct: 250 FRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDI-FSYMKAKGISP-----NIFTYNSL 303
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
++G S W + EM ++ ++ ++S+ ++I CK G ++A + K M + G+
Sbjct: 304 IQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGV 363
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ +VV Y++++ + V A +++ M GC+P V + N +I C+ R+ EA
Sbjct: 364 EPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQ 423
Query: 269 VLAEMPKKGCVPDVITYHCFFR--C-LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ EM +G PD+++Y+ C L + RE LF M+ +G P + TY +LL F
Sbjct: 424 LFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFC 483
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
+ G+L F +++ M+ P+ YN L+DA+ L ARK E+F +GL +P
Sbjct: 484 KQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGL--QPN 541
Query: 386 EELGTKLVQG 395
++ T ++ G
Sbjct: 542 VQIYTTIING 551
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 138/269 (51%), Gaps = 11/269 (4%)
Query: 124 CFGENKNV--GFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVK 175
CF + + V GFS L ++ K + +N ++ G K+ +G+ E +++M RG
Sbjct: 166 CFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQP 225
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
D+H+Y+ ++ +CK G+ A L+++M + G + DVV Y+T+I ++ V+ A+ ++
Sbjct: 226 DVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIF 285
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP 295
M+ G P++ T N++I+ LC R REA A+L EM +P+++T+ K
Sbjct: 286 SYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKE 345
Query: 296 REIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
+ G+ M E G+ P + TY L+ + + ++ M GC PD F+Y
Sbjct: 346 GNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSY 405
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKGLS 381
N L++ + A++ EM +GL+
Sbjct: 406 NILINGYCKAKRIGEAKQLFNEMIHQGLT 434
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 7/227 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
PN T+ + Y V EA F+ + G K +V SY L++ C+ K + EA++L
Sbjct: 365 PNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQL 424
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F E + G + + YN ++ G ++ + + ++ M G + DL +YSI
Sbjct: 425 -FNEMIHQGLTPDIVS-----YNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSIL 478
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D CK G KA +L++ M+ +K ++V YN +I A+ S + A +++ E+ G
Sbjct: 479 LDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGL 538
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR 290
QP+V T+I LC+ G + EA M + GC P+ +Y+ R
Sbjct: 539 QPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIR 585
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 7/221 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ ++ I+ Y A + EA FN++ GL D VSY L+D LC+ + EA +L
Sbjct: 400 PDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDL 459
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
KN+ +G + Y+++L G+ K + K + M + ++ Y+I
Sbjct: 460 F----KNMLTNG--NLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNIL 513
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D MCKS +A KL+ E+ +G++ +V Y T+I + +D A+ +R M E GC
Sbjct: 514 IDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGC 573
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
P+ + N +I+ ++ A ++ EM +KG V DV T
Sbjct: 574 PPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 83/166 (50%), Gaps = 3/166 (1%)
Query: 197 VKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKL 256
+ L K+M+ G+ D + +I + VD V ++ ++G Q ++VT NT+I
Sbjct: 142 ISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLING 201
Query: 257 LCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPK 313
LC+ G+ +A + +M +G PDV TY L K E + GLF +M E+G +P
Sbjct: 202 LCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPD 261
Query: 314 MDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ TY ++ + + ++ M+ G SP+ F YN+L+ L
Sbjct: 262 VVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGL 307
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 6/204 (2%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRA-VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
A+ + M + + ++ +N ++ A V + D + + ++M G P T + +I
Sbjct: 105 ALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLI 164
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIR 311
+ RV ++VLA++ K G ++T++ L K + + LFD M+ G +
Sbjct: 165 NCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQ 224
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
P + TY ++ + G +++KM E GC PD Y+ ++D+L ++ A
Sbjct: 225 PDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDI 284
Query: 372 DEEMFAKGLSAKPREELGTKLVQG 395
M AKG+S P L+QG
Sbjct: 285 FSYMKAKGIS--PNIFTYNSLIQG 306
>gi|449466251|ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Cucumis sativus]
Length = 495
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 186/373 (49%), Gaps = 18/373 (4%)
Query: 13 RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
+ALEFFN+ F HT+ + ++++ ILG+ +FD W+++ +K S+ + T +
Sbjct: 90 QALEFFNYTAKRRGFYHTSFSVDTMLYILGRSRKFDKIWDVLLDVKFKDPSLISLRTVMV 149
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNV 131
+ R V + + +F K +F + +V+ N L+ LC+ K +++A+ +
Sbjct: 150 VLGRIAKVCSVRQTVESFRKFKKFVPEFDVTCFNALLRTLCQEKSMMDARNV-------- 201
Query: 132 GFSGLVEMNKTKI--YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
+ GL M + + +N++L GW K S + F++EM + GV D+ SY+ +D+ CK
Sbjct: 202 -YHGLKSMFRPNLQTFNILLSGW-KSS--EEAEGFFDEMIEMGVKPDVVSYNCLVDVYCK 257
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
+ + KA K+ +M+ + I DV+ Y ++I +G+ D A + +EM+E GC P V
Sbjct: 258 NREMDKAFKVVGKMRDEDIPADVITYTSIIGGLGLVGQPDKARNILKEMKEYGCYPDVAA 317
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMI 306
N I+ C R+ EA+ +L EM KG P+ TY+ FFR + L+ RM+
Sbjct: 318 YNATIRNFCIAKRLHEAFDLLDEMVNKGLSPNATTYNLFFRIFFWSNDLQSAWNLYRRMM 377
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
++G P + + L+R F ++ +W M + G L D L D G L
Sbjct: 378 DTGCLPNTQSCLFLVRLFKKYEKEEMALELWNDMIQKGFGSYILVSEELFDLLCDLGKLI 437
Query: 367 MARKYDEEMFAKG 379
A +M KG
Sbjct: 438 EAESCFLQMVDKG 450
>gi|357480939|ref|XP_003610755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512090|gb|AES93713.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 186/385 (48%), Gaps = 12/385 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+ L + NDW A FF W + + H+ + YN ++DILGK EFDL W L+ MK
Sbjct: 182 QVLKRFGNDWVAAYGFFIWAKKQTPYVHSPEVYNLMVDILGKAKEFDLMWKLVKEMKRIE 241
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEA 120
+ ++M +R+ A +A+ F + ++G+ KD + L+DAL ++
Sbjct: 242 GYVCLDTMSKVM-RRFAKAQRHEDAVEAFRGMGKYGVEKDTAALNKLLDAL------VKG 294
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
Q + N F V ++ + +N+++ GW K+ + K R+ EE + G D+ +Y
Sbjct: 295 QSIEIAHNVLDEFKSSVPLS-SPSFNILINGWCKVRNFEKARKVMEERKEHGFEPDVFTY 353
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ +++ C K ++ +EM+ G + V Y ++ G + + A+ Y M++
Sbjct: 354 NNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTILLLGYGKAGQLSKALEEYERMKK 413
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPREI 298
G P ++++ +L + GR+++A V +MPK+G V DV+TY+ C E
Sbjct: 414 DGIVPDTPFYSSLMYILGKAGRLKDACEVFDDMPKQGVVRDVVTYNTMISTACAHSKEET 473
Query: 299 -LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
L L M E+ +P + TY LL+ + ++ + + M + PD Y LV
Sbjct: 474 ALRLLKEMEETSCKPDLQTYHPLLKMCCKKKRMKVLKFLLDHMFKHDLCPDRGTYTLLVQ 533
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSA 382
+L + G L A + EEM +KG +
Sbjct: 534 SLSNSGKLVEACTFFEEMVSKGFTP 558
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 136/299 (45%), Gaps = 14/299 (4%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP-NHATFRIMFKRYVTAHLVNEAMGT 89
T N ++D L K +++ N++ K SS+P + +F I+ + +A
Sbjct: 281 TAALNKLLDALVKGQSIEIAHNVLDEFK---SSVPLSSPSFNILINGWCKVRNFEKARKV 337
Query: 90 FNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
+ E G + +V +Y N +++ C K + E+ N V Y ++
Sbjct: 338 MEERKEHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAV------TYTIL 391
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
L G+ K K E +E M K G+V D YS M I+ K+G+ A +++ +M K+G+
Sbjct: 392 LLGYGKAGQLSKALEEYERMKKDGIVPDTPFYSSLMYILGKAGRLKDACEVFDDMPKQGV 451
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
DVV YNT+I + A+R+ +EM E C+P + T + ++K+ C+ R++
Sbjct: 452 VRDVVTYNTMISTACAHSKEETALRLLKEMEETSCKPDLQTYHPLLKMCCKKKRMKVLKF 511
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLE---KPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
+L M K PD TY + L K E F+ M+ G P T +L RK
Sbjct: 512 LLDHMFKHDLCPDRGTYTLLVQSLSNSGKLVEACTFFEEMVSKGFTPMETTVKLLTRKL 570
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 171/353 (48%), Gaps = 11/353 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +++D L K + + L+ ++ N + P AT+ + + EA+ K
Sbjct: 36 TYTTIVDWLAKNKKIQEAVALMEKITANGCT-PTIATYNALLNGLCKMGRLEEAIDLLRK 94
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + G D V+Y +L+D L + K EA +L F E + G + T Y ++RG
Sbjct: 95 IVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKL-FKEMASRGLA-----LDTVCYTALIRG 148
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + ++ M +G V D+ + S +D +CK+G+ AV+++K M+ +G+ +
Sbjct: 149 LLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPN 208
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V Y+ +I + + +D A+ + +M++ C P +T N +I LC++G V A A
Sbjct: 209 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFD 268
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM + GC PDV TY+ K G+FD M S P + TY L+ +
Sbjct: 269 EMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRR 328
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
L + ++ M+E GC PD F Y++LVD L G L+ +EM G++
Sbjct: 329 QLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA 381
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 157/366 (42%), Gaps = 47/366 (12%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGE 127
TF I+ V A ++ +A + G ++ +Y +VD L + K + EA L
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVAL---- 56
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
+ + +G T YN +L G KM + + ++ G D+ +Y+ +D +
Sbjct: 57 MEKITANGCTPTIAT--YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGL 114
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
K + ++A KL+KEM +G+ +D V Y +IR + + + A VY+ M GC P V
Sbjct: 115 GKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDV 174
Query: 248 VTCNTVIKLLCENGRVREAYAV-----------------------------------LAE 272
VT +T+I LC+ GR+ A + LA+
Sbjct: 175 VTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQ 234
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M K C PD ITY+ L K ++ FD M+E+G +P + TY +L+ F + G
Sbjct: 235 MKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGN 294
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELG 389
V+ M CSP+ Y L+ L + L A Y + M +G P +
Sbjct: 295 TDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERG--CPPDSFVY 352
Query: 390 TKLVQG 395
+ LV G
Sbjct: 353 SSLVDG 358
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 152/347 (43%), Gaps = 13/347 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY S+ID LGK ++ L M ++ + + + + + A + +A +
Sbjct: 106 TYTSLIDGLGKKKRSFEAYKLFKEMASRGLAL-DTVCYTALIRGLLQAGKIPQASSVYKT 164
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G + D V+ ++D LC+ + A + K++ GL +Y+ ++ G
Sbjct: 165 MTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRI----FKSMEARGLAP--NEVVYSALIHG 218
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K E +M K D +Y+I +D +CKSG A + EM + G K D
Sbjct: 219 LCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPD 278
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V YN +I + D A V+ +M C P+VVT T+I LC+ ++ +A
Sbjct: 279 VYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQ 338
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M ++GC PD Y L K ++ G LFD M SG+ T L+ +
Sbjct: 339 HMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFHLCKAN 397
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
+ ++ + + G P +AYN+++ ALI G ++ + +EM
Sbjct: 398 RVDEAVSLFNAIRKEG-MPHPYAYNSIISALIKSGKVNEGQAVYQEM 443
>gi|297839849|ref|XP_002887806.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333647|gb|EFH64065.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 541
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 183/384 (47%), Gaps = 28/384 (7%)
Query: 10 DWKRALEFFNWVET-DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
+W+ A F W E C D +I +LG +F+++W LI M + S A
Sbjct: 130 EWRLAFLAFKWGEKRGCDDQKACDL---MIWVLGNHQKFNIAWCLIRDMF-HVSKDTRKA 185
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGE 127
F +M RY A+ +A+ TF+ +D+F D+ ++ L+ ALC + H+ +AQE
Sbjct: 186 MF-LMMDRYAAANDTIQAIRTFDIMDKFKHTPDDEAFQGLLYALCRHGHIEKAQEFMLAS 244
Query: 128 NK--NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCRE---FWEEMDKRGVVKDLHSYSI 182
K V G +N+IL GW + W E W EM + + SYS
Sbjct: 245 KKLFPVDVEG---------FNIILNGWCNI--WTDVTEAKRIWREMGNYCITPNKDSYSH 293
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ K G + +++LY EMKK+G+ +V YN+++ + AM++ +M E G
Sbjct: 294 MISCFSKVGNLFDSLRLYDEMKKRGLAPGIVVYNSLLYVLTRENCFHEAMKLLEKMDEEG 353
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL--EKPREILG 300
+P VT N++I+ LCE G++ A VLA M + P V T+H F + + E+LG
Sbjct: 354 LKPGSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFDTNLEVLG 413
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+M SG+ P DT++++L K + +W +M+ + Y A V L+
Sbjct: 414 ---QMKVSGLGPTEDTFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATVQGLL 470
Query: 361 DKGMLDMARKYDEEMFAKGLSAKP 384
G L+ AR+ EM +KG P
Sbjct: 471 SCGWLEKAREIYSEMKSKGFPGNP 494
>gi|359491272|ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Vitis vinifera]
Length = 450
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 182/371 (49%), Gaps = 25/371 (6%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
N +AL+FF ++ + H + +++ IDI G+ ++ W L+ RM+ PN
Sbjct: 79 NHGPKALQFFKSLDYHPTYAHVSSSFDHAIDIAGRLRDYKTLWTLVDRMRTRRLG-PNPK 137
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGE 127
TF I+ +RYV+A + A+ F + E G ++D S+ ++D LC+ K V A F
Sbjct: 138 TFAIITERYVSAGKPDRAIKIFFSMHEHGCVQDLNSFNTILDVLCKSKRVEMADNKLFKV 197
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
F G + ++L+G+F+ + EF+ +M KR D+ +Y+ +
Sbjct: 198 -----FRGR--------FRILLKGFFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGF 244
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
+G+ KA +++ EM +G+ V YN I+ + + V+ A+ V+ EM G P+
Sbjct: 245 GVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNS 304
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDR 304
T N VI+ LC GR+ +A +A M C P+V Y+ R EI L +F++
Sbjct: 305 TTYNVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQIYNVVIRYFCDAEEIEKGLNVFEK 364
Query: 305 MIESGIRPKMDTY-----VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
M ++ P +DTY M +RK + +L + +M E G P +F +N ++D L
Sbjct: 365 MGDADCLPNLDTYNILISAMFVRK--KSDYLLTAGKLLIEMVERGFLPRKFTFNRVLDGL 422
Query: 360 IDKGMLDMARK 370
+ G D A++
Sbjct: 423 LLTGNQDFAKE 433
>gi|15239161|ref|NP_201383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170571|sp|Q9FH87.1|PP447_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g65820
gi|9758569|dbj|BAB09050.1| unnamed protein product [Arabidopsis thaliana]
gi|332010728|gb|AED98111.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 186/369 (50%), Gaps = 13/369 (3%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSIPNHATFRIMFK 75
FF W + H+ + Y S++ IL K +F W LI M K+NP I F ++ +
Sbjct: 133 FFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPE-LFVVLVQ 191
Query: 76 RYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFS 134
R+ +A +V +A+ +++ +FG + DE + L+DALC++ V +A +L E+ + F
Sbjct: 192 RFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLF--EDMRMRFP 249
Query: 135 GLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPW 194
+ + +L GW ++ + + +M++ G D+ Y+ + +GK
Sbjct: 250 V-----NLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMA 304
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
A L ++M+++G + + Y +I+A+ + ++ AM+V+ EM C+ VVT ++
Sbjct: 305 DAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALV 364
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIR 311
C+ G++ + Y VL +M KKG +P +TY EK E L L ++M +
Sbjct: 365 SGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYH 424
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
P + Y +++R + G ++ +W +MEE G SP + +++ L +G L A +
Sbjct: 425 PDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDH 484
Query: 372 DEEMFAKGL 380
+EM +GL
Sbjct: 485 FKEMVTRGL 493
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 112/278 (40%), Gaps = 49/278 (17%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCE---------- 113
PN + ++ + + EAM F +++ + + D V+Y LV C+
Sbjct: 320 PNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIV 379
Query: 114 ---------------YKHVIEAQELCFGENKNVGFSGLVE-MNKTK---------IYNMI 148
Y H++ A E K F +E M K + IYN++
Sbjct: 380 LDDMIKKGLMPSELTYMHIMVAHE------KKESFEECLELMEKMRQIEYHPDIGIYNVV 433
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+R K+ + W EM++ G+ + ++ I ++ + G +A +KEM +G+
Sbjct: 434 IRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGL 493
Query: 209 KMDVVAYNTV---IRAVGVSEGVDFAMRVYREMREMG-CQPSVVTCNTVIKLLCENGRVR 264
V Y T+ + V + ++ A V+ + G C+ +V++ I L G +
Sbjct: 494 -FSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEK 552
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEK--PREILG 300
EA + EM + +P T+ + L+K RE G
Sbjct: 553 EACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNREFAG 590
>gi|413939122|gb|AFW73673.1| hypothetical protein ZEAMMB73_530264 [Zea mays]
Length = 526
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 187/388 (48%), Gaps = 29/388 (7%)
Query: 12 KRALEFFNWVETDCHFTHT---TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
K AL + F +T +D Y++V+D LG+ +FD +W ++ + ++ P
Sbjct: 96 KLALSLLHAARLHPSFVNTQPRSDAYDAVVDALGRARQFDAAWRVVVDASADGAASPR-- 153
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK--DEVSYCNLVDALCEYKHVIEAQELCFG 126
TF ++ +RYV A + +A+ F+ ++ F + D + L+D LC+YK+ A E+
Sbjct: 154 TFAVLARRYVAAGMTRQAIRAFDDMEAFVSREPDAAEFATLLDTLCKYKYPKVATEVFNK 213
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
G K+Y++++ GW K++ ++F ++M G+ ++ +Y+I ++
Sbjct: 214 RKYKYG-------PNEKMYSILIYGWCKVNRSDMAKKFLKDMLVHGIEPNIVTYNILLNG 266
Query: 187 MCK--SGKP--------WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
+C+ S P A L KEM+ +GI+ DV +Y+ ++ + + + ++R
Sbjct: 267 ICRHASLHPDYRFDRTVHAAEDLLKEMRGRGIEPDVTSYSIILHVYSRAHKPELCLCMFR 326
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR 296
M+E G P+V T +VIK L GR+ + +L EM +G P TY+CF + +
Sbjct: 327 SMKERGICPTVATYTSVIKCLSSCGRLEDGEILLDEMVAEGVCPSPATYNCFLKEYRGRK 386
Query: 297 EI---LGLFDRMIESG--IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFA 351
++ L L+++M G P + TY +LL F + V +W M E PD +
Sbjct: 387 DVTAALELYNKMKAPGSLTAPDIHTYNILLGMFSKLNRHGTVMDIWSDMCESTVGPDLDS 446
Query: 352 YNALVDALIDKGMLDMARKYDEEMFAKG 379
Y L+ D A ++ EM KG
Sbjct: 447 YTLLIHCFCDSQKWREACQFFMEMIEKG 474
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 95/240 (39%), Gaps = 17/240 (7%)
Query: 65 PNHATFRIMFK---RYVTAH-------LVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEY 114
PN T+ I+ R+ + H V+ A ++ G++ +V+ +++ +
Sbjct: 255 PNIVTYNILLNGICRHASLHPDYRFDRTVHAAEDLLKEMRGRGIEPDVTSYSIILHVYSR 314
Query: 115 KHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVV 174
H ELC +++ G+ T Y +++ +EM GV
Sbjct: 315 AH---KPELCLCMFRSMKERGICPTVAT--YTSVIKCLSSCGRLEDGEILLDEMVAEGVC 369
Query: 175 KDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG--IKMDVVAYNTVIRAVGVSEGVDFAM 232
+Y+ ++ A++LY +MK G D+ YN ++ M
Sbjct: 370 PSPATYNCFLKEYRGRKDVTAALELYNKMKAPGSLTAPDIHTYNILLGMFSKLNRHGTVM 429
Query: 233 RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
++ +M E P + + +I C++ + REA EM +KG +P IT+ +R L
Sbjct: 430 DIWSDMCESTVGPDLDSYTLLIHCFCDSQKWREACQFFMEMIEKGFLPQKITFETLYRGL 489
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 181/402 (45%), Gaps = 31/402 (7%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D + A+ FF W D F H+T T N + L + D + RM D P+ T
Sbjct: 105 DPQTAIVFFVWA-GDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLD-AGYAPDSYT 162
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQEL----- 123
+ ++ K + +++A +K G K EVS Y L A C+ + +A E+
Sbjct: 163 YHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIP 222
Query: 124 --------------CFGENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCRE 163
C + + L EMN+ K+ YN+++ G K S K E
Sbjct: 223 SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASE 282
Query: 164 FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
EM RGV D +++ MD +CK+GK +A L M ++ + YNT+I +
Sbjct: 283 MLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLC 342
Query: 224 VSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVI 283
+ VD A + E G P VVT + + LC+ GR+ EA+ ++ EM KGC P+++
Sbjct: 343 KQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLV 402
Query: 284 TYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
TY+ L K + L + ++ SG P + TY +++ + G L + + M
Sbjct: 403 TYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGM 462
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ GC+P Y AL++ L G +D A +EM +K +A
Sbjct: 463 LKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTA 504
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 171/380 (45%), Gaps = 19/380 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C ND ALEF + + TYN +ID L K + D + ++H M D + P
Sbjct: 237 CRKNDCDGALEFLKEMN-ERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVT-P 294
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELC 124
+ TF + A A + E + +Y L+ LC+ ++V A++L
Sbjct: 295 DTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDL- 353
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
E + GF + Y+++ G K + E +EM +G +L +Y+ +
Sbjct: 354 VDEFVSSGF-----VPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLI 408
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D +CK+ K KA +L + + G DVV Y ++ + +D A+++ M + GC
Sbjct: 409 DGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCT 468
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--C-LEKPREILGL 301
PSV+T +++ LC GRV EA+ + EM K C D + Y C + +E +
Sbjct: 469 PSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKV 528
Query: 302 FDRMIESGIR--PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
D GIR P +D Y L+ + + G L + V++ M GC P+ YN ++D L
Sbjct: 529 VD-----GIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGL 583
Query: 360 IDKGMLDMARKYDEEMFAKG 379
G +D A + E M + G
Sbjct: 584 CKHGKVDEAFPFLESMHSAG 603
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 163/375 (43%), Gaps = 16/375 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A+ ++A E + + F TY ++D L K D + ++ M + P
Sbjct: 412 CKASKTEKAYELLESLVSS-GFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCT-P 469
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKL-DEFGLKDEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ + + V+EA F ++ + D ++Y +LV+ C+ EAQ++
Sbjct: 470 SVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKV- 528
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
G+ +YN ++ G+ K + +E+M RG V ++ +Y+I M
Sbjct: 529 --------VDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVM 580
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D +CK GK +A + M G DVV+YN +I + + A +V +M + G
Sbjct: 581 DGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIP 640
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGL 301
P VT NT++ C+ R +A +L M K G PD +TY+ L + + L
Sbjct: 641 PDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYEL 700
Query: 302 FDRMIESG-IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
M+ +G + TY ++ + + G L+ ++ M G + YN +D L
Sbjct: 701 MHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLC 760
Query: 361 DKGMLDMARKYDEEM 375
+G LD A EM
Sbjct: 761 KEGRLDEASSLLSEM 775
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 145/323 (44%), Gaps = 14/323 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+YN +ID L K + + ++ +M P+ T+ + ++ ++A+G
Sbjct: 610 SYNIIIDGLFKASKPKEARQVLDQMI-QAGIPPDAVTYNTLMAQFCKEERFDDAVGILKN 668
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + G+ D V+Y L+ L + + +A EL +N G V ++ YN I+
Sbjct: 669 MIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRN----GCV-VSACTTYNTIIDR 723
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + + M GV + +Y+I++D +CK G+ +A L EM D
Sbjct: 724 LCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD---TLRD 780
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREM-GCQPSVVTCNTVIKLLCENGRVREAYAVL 270
V+Y TVI + +E +D A ++ REM + G + T N +I + R+ EA +L
Sbjct: 781 EVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLL 840
Query: 271 AEMPKKGCVPDVITYHCFFRC---LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
M ++GC P VITY+ C L+K + LFD M GI +Y +L+
Sbjct: 841 GLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQ 900
Query: 328 GFLRPVFVVWKKMEELGCSPDEF 350
G + V ++M C D+
Sbjct: 901 GRGKEALQVLEEMASSDCEIDDL 923
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 148/366 (40%), Gaps = 44/366 (12%)
Query: 55 HRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV-DALCE 113
++ D P + + Y ++E F + G + N+V D LC+
Sbjct: 526 QKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCK 585
Query: 114 YKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGV 173
+ V EA F +++ +G V YN+I+ G FK S + R+ ++M + G+
Sbjct: 586 HGKVDEA----FPFLESMHSAGCVP--DVVSYNIIIDGLFKASKPKEARQVLDQMIQAGI 639
Query: 174 VKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMR 233
D +Y+ M CK + AV + K M K G+ D V YNT+I + + + A
Sbjct: 640 PPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYE 699
Query: 234 VYREMREMGCQPSVVTC-NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
+ EM GC S T NT+I LC+ G +++A ++ M G + +TY+ F L
Sbjct: 700 LMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRL 759
Query: 293 EKPRE-----------------------ILGL-----FDRMIE--------SGIRPKMDT 316
K I+GL DR + G+ T
Sbjct: 760 CKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHT 819
Query: 317 YVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
+ +L+ F + L + M + GCSP YN ++ L +D A + +EM
Sbjct: 820 FNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMA 879
Query: 377 AKGLSA 382
+G+ A
Sbjct: 880 VRGIVA 885
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 165/334 (49%), Gaps = 12/334 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL 123
PN T+ I+ + + + + + +G F +++ G L + V+Y L+DA C+ + EA
Sbjct: 8 PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEA--- 64
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
FG K++ G+ YN+I+ G + + E EEM +G D +Y+
Sbjct: 65 -FGLLKSMSSKGM--QPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTL 121
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
++ CK G +A+ ++ EM + G+ VV Y +I ++ + ++ AM + +MR G
Sbjct: 122 LNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGL 181
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR---CLEKPREILG 300
+P+ T T+I G + EAY +L EM + G P V+TY+ F LE+ E LG
Sbjct: 182 RPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALG 241
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+ M+E G+ P + +Y ++ F R G L F + ++M E G SPD Y++L+ L
Sbjct: 242 VVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLC 301
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQ 394
+ L A +EM GL P E T L+
Sbjct: 302 EMRRLTEACDLSQEMLDMGL--PPDEFTYTTLIN 333
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 161/352 (45%), Gaps = 11/352 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN +I E M+ N +PN T+ + Y ++EA G
Sbjct: 12 TYNILIRGFCSVGELQKGLGCFGEMERN-GCLPNVVTYNTLIDAYCKMGRIDEAFGLLKS 70
Query: 93 LDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G++ +SY +++ LC + EA E+ + +G+ G T YN +L G
Sbjct: 71 MSSKGMQPNLISYNVIINGLCREGSMKEAWEIL----EEMGYKGFTPDEVT--YNTLLNG 124
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K + + EM + GV + +Y+ ++ MCK+ +A++ + +M+ +G++ +
Sbjct: 125 YCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPN 184
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
Y T+I ++ A R+ EM E G PSVVT N I C R+ EA V+
Sbjct: 185 ERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQ 244
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREILGLF---DRMIESGIRPKMDTYVMLLRKFGRWG 328
EM +KG PDV++Y + E+ F M+E G+ P TY L++
Sbjct: 245 EMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMR 304
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
L + ++M ++G PDEF Y L++A +G L+ A +EM KG
Sbjct: 305 RLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGF 356
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 160/375 (42%), Gaps = 30/375 (8%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
FT TYN++++ K F + + M N S P+ T+ + A +N A
Sbjct: 111 FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVS-PSVVTYTALINSMCKARNLNRA 169
Query: 87 MGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
M F+++ GL+ +E +Y L+D + EA + E GFS V Y
Sbjct: 170 MEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRI-LNEMTESGFSPSV-----VTY 223
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N + G + + +EM ++G+ D+ SYS + C+ G+ +A ++ +EM +
Sbjct: 224 NAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVE 283
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
KG+ D V Y+++I+ + + A + +EM +MG P T T+I C G + +
Sbjct: 284 KGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNK 343
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEK--------------------PREILGLFDRM 305
A + EM KG +PD +TY L K P ++ +D +
Sbjct: 344 ALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDV--TYDTL 401
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
IE+ + + V L++ F G + V++ M E P E YN ++ G L
Sbjct: 402 IENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNL 461
Query: 366 DMARKYDEEMFAKGL 380
A +EM G
Sbjct: 462 PKAFNLYKEMIHSGF 476
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 107/217 (49%), Gaps = 3/217 (1%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M + V ++++Y+I + C G+ K + + EM++ G +VV YNT+I A
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
+D A + + M G QP++++ N +I LC G ++EA+ +L EM KG PD +TY+
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120
Query: 288 FFR--CLEKP-REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
C E + L + M+ +G+ P + TY L+ + L + +M G
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
P+E Y L+D +G+L+ A + EM G S
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFS 217
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 65/353 (18%), Positives = 122/353 (34%), Gaps = 94/353 (26%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A + RA+EFF+ + TY ++ID + + ++ +++ M ++ S P
Sbjct: 161 CKARNLNRAMEFFDQMRIR-GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFS-P 218
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-------------------------- 99
+ T+ + + EA+G ++ E GL
Sbjct: 219 SVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMK 278
Query: 100 ----------DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
D V+Y +L+ LCE + + EA +L ++ + GL T Y ++
Sbjct: 279 QEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDL----SQEMLDMGLPPDEFT--YTTLI 332
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM---------------------- 187
+ K +EM +G + D +YS+ ++ +
Sbjct: 333 NAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESV 392
Query: 188 ----------------------------CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
C G +A ++++ M ++ K YN +I
Sbjct: 393 PSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVII 452
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
+ A +Y+EM G P VT T+IK L + G E V+ +
Sbjct: 453 HGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGD 505
>gi|356560073|ref|XP_003548320.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Glycine max]
Length = 466
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 190/402 (47%), Gaps = 19/402 (4%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILG----KFFEFDLSWNLIHRMKDNPSSIP 65
D K AL FF W ++H YN ++DIL K +F + +++ MK N +
Sbjct: 36 DEKIALRFFTWAGHQEDYSHEPCAYNDMMDILSSTRYKVKQFRIVCDVLEYMKRNNKTTV 95
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV-DALCEYKHVIEAQELC 124
++ ++Y +L + + + E++ NL+ DALC+ V +A+ L
Sbjct: 96 PVEVLLVILRKYTEKYLTHVQKFARKRRIRVKTQPEINAFNLLLDALCKCCLVEDAETLY 155
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
K V + + YN+ + GW ++ + + EEM + G D +Y+ +
Sbjct: 156 KKMRKTVKPNA-------ETYNIFVFGWCRVRNPTRGMKLLEEMVELGHRPDNFAYNTAI 208
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMD---VVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
D CK+G +AV L++ M+ KG + Y +I A+ + ++ ++ M
Sbjct: 209 DTYCKAGMVTEAVDLFEFMRTKGSSISSPTAKTYAIIIVALAQHDRMEECFKLIGHMISS 268
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREI 298
GC P V T +I+ +C G++ EAY L EM K PD++TY+CF + L +K +
Sbjct: 269 GCLPDVTTYKEIIEGMCVCGKIDEAYKFLEEMGNKSYRPDIVTYNCFLKVLCDNKKSEDA 328
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
L L+ RMIE P + TY ML+ F F W++M+ GC PD Y+ ++D
Sbjct: 329 LKLYGRMIELNCIPSVQTYNMLISMFFEIDDPDGAFETWQEMDNRGCRPDIDTYSVMIDG 388
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGE 400
L + ++ A EE+ KG+ P ++ + L+Q + G+
Sbjct: 389 LFNCNKVEDACFLLEEVINKGIKL-PYKKFDSFLMQLSVIGD 429
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 110/244 (45%), Gaps = 22/244 (9%)
Query: 6 CYANDWKRALEFFNWVET--DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
C A A++ F ++ T + T TY +I L + + + LI M +
Sbjct: 212 CKAGMVTEAVDLFEFMRTKGSSISSPTAKTYAIIIVALAQHDRMEECFKLIGHMISS-GC 270
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK----DEVSYCNLVDALCEYKHVIE 119
+P+ T++ + + ++EA + L+E G K D V+Y + LC+ K +
Sbjct: 271 LPDVTTYKEIIEGMCVCGKIDEA---YKFLEEMGNKSYRPDIVTYNCFLKVLCDNKKSED 327
Query: 120 AQELCFGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
A +L + ++E+N + YNM++ +F++ E W+EMD RG D
Sbjct: 328 ALKL---------YGRMIELNCIPSVQTYNMLISMFFEIDDPDGAFETWQEMDNRGCRPD 378
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
+ +YS+ +D + K A L +E+ KGIK+ +++ + + V + RV
Sbjct: 379 IDTYSVMIDGLFNCNKVEDACFLLEEVINKGIKLPYKKFDSFLMQLSVIGDLQAIHRVSE 438
Query: 237 EMRE 240
MR+
Sbjct: 439 HMRK 442
>gi|326525088|dbj|BAK07814.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 539
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 185/366 (50%), Gaps = 27/366 (7%)
Query: 11 WKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
+ AL FF+ V Y ++ID+L K F L+ +L+ M++ + +
Sbjct: 119 FPEALTFFHHVVPSLPADSLPALYAAMIDLLAKHHHFPLARHLLDEMRERSIPVSSQVIL 178
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFG--LKDEVSYCNLVDALCEYKHVIEAQELCFGEN 128
I+ +RYV A + EA F +++E+G + D +L+ AL + + EAQ L F
Sbjct: 179 AII-RRYVRAGMSPEASELFRRMEEYGAGVPDPAVLASLLGALSKKRLAGEAQAL-FDSY 236
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
K+V +V +Y ++ W + K + + EM + G++ ++++Y+ +D M
Sbjct: 237 KSVFPPDVV------LYTTLVHAWCRAGCLDKAEQVFAEMQQAGIMPNVYTYTSVIDAMY 290
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA---VGVSEGVDFAMRVYREMREMGCQP 245
++G+ +A +L +M + G + +N ++RA G SE V ++V+ +MR++GC P
Sbjct: 291 RAGQVPRAQELLCQMMETGCPPNTATFNAIMRAHVKAGRSEQV---LQVHNQMRQLGCDP 347
Query: 246 SVVTCNTVIKLLCENGR--VREAYAVLAEMPKKGCVPDVITYHCFFRC------LEKPRE 297
++T N +++ C G+ + A VLA+M KGC+PD T++ + +E R
Sbjct: 348 DIITYNFLMETHCGKGQSNLDAAMKVLAKMIAKGCIPDCHTFNPMLKLVLGTGNVEAARR 407
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
L++RM E +P + TY +L++ F + + V + K M+ G P+ Y AL++
Sbjct: 408 ---LYERMQELQCKPNVVTYNLLMKLFNKEKSMDMVLRIKKDMDAQGVEPNVNTYGALIE 464
Query: 358 ALIDKG 363
+ +G
Sbjct: 465 SFCGRG 470
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 9/243 (3%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+Y ++ K + R +EM +R + + ++G +A +L++ M
Sbjct: 141 LYAAMIDLLAKHHHFPLARHLLDEMRERSIPVSSQVILAIIRRYVRAGMSPEASELFRRM 200
Query: 204 KKKGIKM-DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
++ G + D +++ A+ A ++ + + P VV T++ C G
Sbjct: 201 EEYGAGVPDPAVLASLLGALSKKRLAGEAQALFDSYKSV-FPPDVVLYTTLVHAWCRAGC 259
Query: 263 VREAYAVLAEMPKKGCVPDVITY----HCFFRCLEKPREILGLFDRMIESGIRPKMDTYV 318
+ +A V AEM + G +P+V TY +R + PR L +M+E+G P T+
Sbjct: 260 LDKAEQVFAEMQQAGIMPNVYTYTSVIDAMYRAGQVPRA-QELLCQMMETGCPPNTATFN 318
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM--LDMARKYDEEMF 376
++R + G V V +M +LGC PD YN L++ KG LD A K +M
Sbjct: 319 AIMRAHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKVLAKMI 378
Query: 377 AKG 379
AKG
Sbjct: 379 AKG 381
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 41/242 (16%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY SVID + + + + L+ +M + PN ATF + + +V A + + N+
Sbjct: 281 TYTSVIDAMYRAGQVPRAQELLCQMMET-GCPPNTATFNAIMRAHVKAGRSEQVLQVHNQ 339
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + G D ++Y L++ C G+ +
Sbjct: 340 MRQLGCDPDIITYNFLMETHC-------------GKGQ---------------------- 364
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
S + +M +G + D H+++ + ++ +G A +LY+ M++ K +
Sbjct: 365 ----SNLDAAMKVLAKMIAKGCIPDCHTFNPMLKLVLGTGNVEAARRLYERMQELQCKPN 420
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
VV YN +++ + +D +R+ ++M G +P+V T +I+ C G R A+A L
Sbjct: 421 VVTYNLLMKLFNKEKSMDMVLRIKKDMDAQGVEPNVNTYGALIESFCGRGNWRRAHATLR 480
Query: 272 EM 273
EM
Sbjct: 481 EM 482
>gi|15220863|ref|NP_178203.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200729|sp|Q9SAH2.1|PP137_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80880, mitochondrial; Flags: Precursor
gi|6503300|gb|AAF14676.1|AC011713_24 Contains PF|01535 Domain of unknown function [Arabidopsis thaliana]
gi|91806121|gb|ABE65789.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198342|gb|AEE36463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 540
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 188/386 (48%), Gaps = 30/386 (7%)
Query: 9 NDWKRALEFFNWVET-DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
++W+ A F W E C + D +I +LG +F+++W LI M N S
Sbjct: 135 DEWRLAFLAFKWGEKRGCDDQKSCDL---MIWVLGNHQKFNIAWCLIRDMF-NVSKDTRK 190
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK--DEVSYCNLVDALCEYKHVIEAQELCF 125
A F +M RY A+ ++A+ TF+ +D+F DE ++ L+ ALC + H+ +A+E
Sbjct: 191 AMF-LMMDRYAAANDTSQAIRTFDIMDKFKHTPYDE-AFQGLLCALCRHGHIEKAEEFML 248
Query: 126 GENK--NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCRE---FWEEMDKRGVVKDLHSY 180
K V G +N+IL GW + W E W EM + + SY
Sbjct: 249 ASKKLFPVDVEG---------FNVILNGWCNI--WTDVTEAKRIWREMGNYCITPNKDSY 297
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
S + K G + +++LY EMKK+G+ + YN+++ + + D AM++ +++ E
Sbjct: 298 SHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNE 357
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL--EKPREI 298
G +P VT N++I+ LCE G++ A VLA M + P V T+H F + EK E+
Sbjct: 358 EGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEKTLEV 417
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
LG +M S + P +T++++L K + +W +M+ + Y A +
Sbjct: 418 LG---QMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQG 474
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAKP 384
L+ G L+ AR+ EM +KG P
Sbjct: 475 LLSCGWLEKAREIYSEMKSKGFVGNP 500
>gi|357159762|ref|XP_003578551.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Brachypodium distachyon]
Length = 534
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 184/368 (50%), Gaps = 31/368 (8%)
Query: 11 WKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP-NHAT 69
+ AL FFN V + Y S++D+L K F L+ +L+ M+ SIP +
Sbjct: 114 FPEALAFFNHVLPSLPTDSLPELYASMMDLLAKHHHFPLARHLLDEMRKR--SIPISSQV 171
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFG--LKDEVSYCNLVDALCEYKHVIEAQELCFGE 127
+ +RYV A + +EA F ++E+G + D +L+ AL + + EAQ L F
Sbjct: 172 ILALIRRYVRAGMSSEASDLFRSMEEYGGGVPDPAVLASLLGALSKKRLASEAQAL-FDS 230
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
K+V +V +Y ++ W + K + + EM + G++ ++++Y+ +D M
Sbjct: 231 YKSVFTPDVV------LYTTLVHAWCRSGCLDKAEQVFAEMQQAGIMPNVYTYTAVIDAM 284
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA---VGVSEGVDFAMRVYREMREMGCQ 244
++G+ +A +L +M G + +N ++RA G SE V ++V+ +MR++GC
Sbjct: 285 YRAGQVPRAQELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQV---LQVHNQMRQLGCD 341
Query: 245 PSVVTCNTVIKLLCENGR--VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG-- 300
P ++T N +++ C G+ + A +L +M KGC PD T++ + + +LG
Sbjct: 342 PDIITYNFLMETHCGKGQSNLDAAMKLLLKMIAKGCTPDCHTFNPMLKLV----VVLGNV 397
Query: 301 -----LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
L++RM E +P + TY +L++ FG+ + V + K M+ G P+ Y AL
Sbjct: 398 DAAHKLYERMQELQCKPNVITYNLLMKLFGKDKSMDMVLRIKKDMDAQGVEPNVNTYGAL 457
Query: 356 VDALIDKG 363
++ +G
Sbjct: 458 IETFCGRG 465
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 186/374 (49%), Gaps = 12/374 (3%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKR 76
FF W + H+ + S++ IL K +F W LI M+ + F ++ +R
Sbjct: 117 FFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRR 176
Query: 77 YVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSG 135
+ +A++V +A+ +++ ++GL+ DE + L+DALC+ V EA ++ E+ F
Sbjct: 177 FASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVF--EDMREKFPP 234
Query: 136 LVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK 195
+ + +L GW + + +E +M + G+ D+ ++ + +GK
Sbjct: 235 -----NLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMAD 289
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG-VDFAMRVYREMREMGCQPSVVTCNTVI 254
A L +M+K+G + +V Y +I+A+ +E +D AMRV+ EM GC+ +VT +I
Sbjct: 290 AYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALI 349
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIR 311
C+ G + + Y+VL +M KKG +P +TY EK E L L ++M G
Sbjct: 350 SGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCH 409
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
P + Y +++R + G ++ +W +ME G SP + +++ +G L A +
Sbjct: 410 PDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNH 469
Query: 372 DEEMFAKGLSAKPR 385
+EM ++G+ + P+
Sbjct: 470 FKEMVSRGIFSAPQ 483
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 132/346 (38%), Gaps = 85/346 (24%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKR 76
F N + H D Y+ + D+ + FE PN + ++ +
Sbjct: 274 FTNLLSGYAHAGKMADAYDLMNDMRKRGFE------------------PNVNCYTVLIQA 315
Query: 77 YV-TAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFS 134
T ++EAM F +++ +G + D V+Y L+ C++ + + G+S
Sbjct: 316 LCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMI------------DKGYS 363
Query: 135 GLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
L +M K + Y I+ K + +C E E+M +RG DL Y++ + + C
Sbjct: 364 VLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLAC 423
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG---------------VSEGVDFAMR 233
K G+ +AV+L+ EM+ G+ V + +I VS G+ F+
Sbjct: 424 KLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI-FSAP 482
Query: 234 VYREMREM-------------------------GCQPSVVTCNTVIKLLCENGRVREAYA 268
Y ++ + C+ +V I L G V+EA +
Sbjct: 483 QYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACS 542
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKM 314
+M + +P TY + L K L++R I + I K+
Sbjct: 543 YCLDMMEMDLMPQPNTYAKLMKGLNK------LYNRTIAAEITEKV 582
>gi|147862837|emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
Length = 927
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 177/377 (46%), Gaps = 17/377 (4%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
K A FF W FTH + TYN+++ +LG+ +F+ ++ M + + TF
Sbjct: 250 KPAFRFFCWAGQKAGFTHNSRTYNAMMSVLGRTRQFESMMGMLGEMGE--KGLLTMETFS 307
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKN 130
I K + A +A+G F + + V N L+D L K EAQ L
Sbjct: 308 IAIKAFAAAKERKKAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQAL------- 360
Query: 131 VGFSGLVE--MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
F L + + Y ++L GW ++ + W EM +G D+ ++ ++ +
Sbjct: 361 --FEKLEDRFTPNLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLL 418
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
K K A+KL++ MK KG +V Y +IR + + A+ + EM + GCQP
Sbjct: 419 KCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMKEAVEYFDEMVDSGCQPDAA 478
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRM 305
+I ++ + YA+L EM +KGC D TY+ + + + P + + ++ +M
Sbjct: 479 VYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKM 538
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
I++GI+P + TY M+++ + VWK+M GC PD+ +Y + LI G
Sbjct: 539 IQNGIQPTLHTYNMMMKSYFYTRNYEMGCAVWKEMGRKGCCPDDNSYIVFIGGLIRHGRS 598
Query: 366 DMARKYDEEMFAKGLSA 382
+ A +Y EEM KG+ A
Sbjct: 599 EEACRYLEEMIEKGMKA 615
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 136/304 (44%), Gaps = 27/304 (8%)
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEA--QELCFGENKNVGFSGLVEMNKTKIYNMILR 150
LDE + ++S+ +V L +KH + + C+ K GF+ + ++ YN +
Sbjct: 226 LDECNV--DLSHALVVGVLERFKHARKPAFRFFCWAGQK-AGFT-----HNSRTYNAM-- 275
Query: 151 GWFKMSWWGKCREFWE------EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
MS G+ R+F EM ++G++ + ++SI + + + KAV +++ MK
Sbjct: 276 ----MSVLGRTRQFESMMGMLGEMGEKGLLT-METFSIAIKAFAAAKERKKAVGVFELMK 330
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+ V N ++ +G ++ A ++ ++ + P++ T ++ C +
Sbjct: 331 RYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDR-FTPNLRTYTVLLNGWCRIKNLV 389
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLL 321
EA EM KG PD+I +H L +K + + LF+ M G P + TY +L+
Sbjct: 390 EAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILI 449
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
R + ++ + +M + GC PD Y L+ ++ +D +EM KG
Sbjct: 450 RDLCKQMKMKEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCP 509
Query: 382 AKPR 385
A R
Sbjct: 510 ADGR 513
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 125/293 (42%), Gaps = 32/293 (10%)
Query: 26 HFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNE 85
+F DT N ++D LG+ + L +++D PN T+ ++ + + E
Sbjct: 333 NFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDR--FTPNLRTYTVLLNGWCRIKNLVE 390
Query: 86 AMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL-----CFGENKNVG------- 132
A T+N++ + G K D +++ +++ L + K +A +L G + NV
Sbjct: 391 AGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIR 450
Query: 133 --------------FSGLVE---MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVK 175
F +V+ +Y ++ G+ K +EM ++G
Sbjct: 451 DLCKQMKMKEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPA 510
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
D +Y+ + +M P AV++YK+M + GI+ + YN ++++ + + V+
Sbjct: 511 DGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQPTLHTYNMMMKSYFYTRNYEMGCAVW 570
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
+EM GC P + I L +GR EA L EM +KG + Y+ F
Sbjct: 571 KEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKF 623
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 175/372 (47%), Gaps = 13/372 (3%)
Query: 28 THTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAM 87
T +T Y S+I L FD + L M + P+ T+ +M ++ EA
Sbjct: 42 TPSTVAYTSLIHGLCMANSFDDARELFADM-NRRGCPPSPVTYNVMIDASCKRGMLEEAC 100
Query: 88 GTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYN 146
K+ E G + D V+Y ++D LC+ V EA L F E + +G + + +N
Sbjct: 101 DLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEAL-LLFNEMERLGCT-----PNRRSHN 154
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
I+ G + S + + + EM+ + + D SY I +D + K+GK +A KL++ M
Sbjct: 155 TIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDS 214
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
GI V YN VI + ++ +D A+ +++ MR GC+PS T N +I C+ G++ EA
Sbjct: 215 GITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEA 274
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRK 323
+ +L M G VPDV+TY L + + L + M++ +P + T L+
Sbjct: 275 FRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHG 334
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAK 383
+ G ++ V M G SPD YN LV G + AR+ +M A+GL+
Sbjct: 335 LCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLA-- 392
Query: 384 PREELGTKLVQG 395
P T LV G
Sbjct: 393 PNVVTYTALVSG 404
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 175/405 (43%), Gaps = 18/405 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + +A + F+ +E + +Y +ID L K + + ++ L RM D+ P
Sbjct: 161 CQQSKIDQACQVFHEMEAK-DIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDS-GITP 218
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ ++ A+ ++EA+ F + G + ++ L+DA C+ + EA L
Sbjct: 219 SAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLL 278
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
K + G V Y+ ++ G ++ R E+M KR + + + +
Sbjct: 279 ----KRMTDDGHVP--DVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLI 332
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+CK+G+ +A ++ M G DVV YNT++ + + A + +M G
Sbjct: 333 HGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLA 392
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---L 301
P+VVT ++ LC+ R+ EA V A+M GC P++ TY ++ G L
Sbjct: 393 PNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKL 452
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWG-FLRPVFVVWKKMEELGCSP--DEFAYNALVDA 358
F M+ +GI P Y L + + G R + ++ + E L DE Y VD
Sbjct: 453 FGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV-YRFAVDG 511
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQSG 403
L++ G ++MA + +M G P E LV G Q G
Sbjct: 512 LLEAGKMEMALGFVRDMVRGG--QLPAPERCASLVAGLCKSGQGG 554
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 108/217 (49%), Gaps = 3/217 (1%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M++R V D SY I +D + K+GK A L++++ G+ VAY ++I + ++
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
D A ++ +M GC PS VT N +I C+ G + EA ++ +M + G VPDV+TY+
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 288 FFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
L K E L LF+ M G P ++ ++ + + V+ +ME
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
PD ++Y L+D L G L+ A K + M G++
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGIT 217
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 113/273 (41%), Gaps = 38/273 (13%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y +++ G K R ++++ GV +Y+ + +C + A +L+ +M
Sbjct: 13 YGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 72
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
++G V YN +I A ++ A + ++M E G P VVT NTV+ LC++ RV
Sbjct: 73 RRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVE 132
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL-------------------------------- 292
EA + EM + GC P+ +++ L
Sbjct: 133 EALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILI 192
Query: 293 ------EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
K E LF RM++SGI P TY +++ L ++K M GC
Sbjct: 193 DGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCR 252
Query: 347 PDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
P F +N L+DA +G LD A + + M G
Sbjct: 253 PSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDG 285
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 129/336 (38%), Gaps = 71/336 (21%)
Query: 6 CYANDWKRALEFFNWVET-DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C A ALE F + + C + T +N +ID K + D ++ L+ RM D+ +
Sbjct: 231 CLAYTLDEALELFKSMRSKGCRPSRFT--FNILIDAHCKRGKLDEAFRLLKRMTDD-GHV 287
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQEL 123
P+ T+ + + V++A + + K V N L+ LC+ + EA+E+
Sbjct: 288 PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 347
Query: 124 -----CFGENKNVGF----------SGLVEMNKTKIYNMILRGW------FKMSWWGKCR 162
G++ +V +G E + + +M+ RG + G C+
Sbjct: 348 LDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCK 407
Query: 163 E--------FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVA 214
+ +M G +L +Y+ + C +G+ +KL+ EM GI D V
Sbjct: 408 ANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVV 467
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREM--------------------------------- 241
Y T+ + S A+ + RE RE
Sbjct: 468 YGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRD 527
Query: 242 ----GCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
G P+ C +++ LC++G+ EA AVL E+
Sbjct: 528 MVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 563
>gi|255579531|ref|XP_002530608.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529856|gb|EEF31788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 596
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 191/394 (48%), Gaps = 17/394 (4%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKR 76
FF W + H+ + Y +++ I K +F W L+ M+ + S + F ++ +R
Sbjct: 126 FFVWASKQPGYRHSYENYKAMVKIFSKMRQFGAVWALLEEMRKDNSVLITSELFIVLIRR 185
Query: 77 YVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSG 135
+ +A LV +A+ +++ ++G + DE + L+DALC+ V +A L E+ V FS
Sbjct: 186 FASARLVEKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKQAASLF--EDMRVRFSP 243
Query: 136 LVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK 195
+ + +L GW + + + +M + G D+ ++ + +GK
Sbjct: 244 -----SLRHFTSLLYGWCREGKLIEAKHVLVQMREAGFEPDIVVFNNLLSAYSMAGKMTD 298
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A L KEM +KG + + +Y +I+A E +D AMRV+ EM GC+ VVT +I
Sbjct: 299 AFDLLKEMVRKGCEPNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALIS 358
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL------EKPREILGLFDRMIESG 309
C+ G++ Y +L M +KG +P+ +TY R L E+ E L L + M G
Sbjct: 359 GFCKWGKINRGYQILDAMKQKGHMPNQLTY---LRILLAHEKKEELEECLELIESMRMVG 415
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
P + Y +++R + G ++ +W +ME SP+ + ++ + +G L A
Sbjct: 416 CVPDLSIYNVVIRLACKLGEVKQGVQIWNEMEASDFSPELDTFVIMIHGFLGQGCLVEAC 475
Query: 370 KYDEEMFAKGLSAKPREELGTKLVQGGLDGEQSG 403
+Y +EM +GL P+ + +L+ L GE+ G
Sbjct: 476 EYFKEMIGRGLLTTPQYGILKELLNALLRGEKLG 509
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 54/286 (18%), Positives = 111/286 (38%), Gaps = 40/286 (13%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PN ++ IM + + + ++EAM F +++ G + D V+Y L+ C++ + ++
Sbjct: 313 PNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALISGFCKWGKINRGYQI 372
Query: 124 CFGENKNVGFSGLVE-----------------------------MNKTKIYNMILRGWFK 154
+ + + IYN+++R K
Sbjct: 373 LDAMKQKGHMPNQLTYLRILLAHEKKEELEECLELIESMRMVGCVPDLSIYNVVIRLACK 432
Query: 155 MSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVA 214
+ + + W EM+ +L ++ I + G +A + +KEM +G+ +
Sbjct: 433 LGEVKQGVQIWNEMEASDFSPELDTFVIMIHGFLGQGCLVEACEYFKEMIGRGL-LTTPQ 491
Query: 215 YNTV---IRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
Y + + A+ E + A V+ + GC+ + I L NG V+EA +
Sbjct: 492 YGILKELLNALLRGEKLGMAKDVWSCIVTKGCELNADAWTIWIHSLFSNGHVKEACSYCL 551
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTY 317
+M + +P T+ R L K L++R + I K+ +
Sbjct: 552 DMMEADIMPKPETFAKLMRGLRK------LYNREFAAEITEKIKDF 591
>gi|356531098|ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Glycine max]
Length = 466
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 194/404 (48%), Gaps = 23/404 (5%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILG----KFFEFDLSWNLIHRMKDNPSSIP 65
D K AL FF W ++H YN ++DIL K +F + +++ MK N ++
Sbjct: 36 DEKIALRFFTWAGHQEDYSHEPCAYNDMMDILSSTRYKVKQFRIVCDVLEYMKRNNRTMV 95
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV---SYCNLVDALCEYKHVIEAQE 122
++ ++Y +L + M F K +K ++ ++ L+DALC+ V +A+
Sbjct: 96 PAEVLLVILRKYTEKYLTH--MQKFAKKKRIRVKTQLEINAFNLLLDALCKCCLVEDAES 153
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L K V + + YN+++ GW ++ + + EEM + G D +Y+
Sbjct: 154 LYKKMRKTVKPNA-------ETYNILVFGWCRVRNPTRGMKLLEEMIELGHRPDNFTYNT 206
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMD---VVAYNTVIRAVGVSEGVDFAMRVYREMR 239
+D CK+G +AV L++ M+ KG + Y +I A+ + ++ ++ M
Sbjct: 207 AIDTYCKTGMITEAVDLFEFMRTKGSTISSPTAKTYAIIIVALAQHDRMEDCFKLIGHMI 266
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPR 296
GC P V T +I+ +C G++ EAY L EM K PD++TY+CF + L +K
Sbjct: 267 SSGCLPDVTTYKEIIEGMCMCGKIDEAYKFLEEMGNKSYRPDIVTYNCFLKVLCDNKKSE 326
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
+ L L+ RMIE P + TY ML+ F F W++++ GC PD Y ++
Sbjct: 327 DALKLYGRMIELNCIPSVQTYNMLISMFFEMDDPDGAFETWQEIDNRGCRPDTDTYCVMI 386
Query: 357 DALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGE 400
+ L + ++ A EE+ +G+ P ++ + L+Q + G+
Sbjct: 387 EGLFNCNKMEDACFLLEEVINEGVKL-PYKKFDSFLMQLSVIGD 429
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 107/244 (43%), Gaps = 22/244 (9%)
Query: 6 CYANDWKRALEFFNWVET--DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
C A++ F ++ T + T TY +I L + + + LI M +
Sbjct: 212 CKTGMITEAVDLFEFMRTKGSTISSPTAKTYAIIIVALAQHDRMEDCFKLIGHMISS-GC 270
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK----DEVSYCNLVDALCEYKHVIE 119
+P+ T++ + + ++EA + L+E G K D V+Y + LC+ K +
Sbjct: 271 LPDVTTYKEIIEGMCMCGKIDEA---YKFLEEMGNKSYRPDIVTYNCFLKVLCDNKKSED 327
Query: 120 AQELCFGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
A +L + ++E+N + YNM++ +F+M E W+E+D RG D
Sbjct: 328 ALKL---------YGRMIELNCIPSVQTYNMLISMFFEMDDPDGAFETWQEIDNRGCRPD 378
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
+Y + ++ + K A L +E+ +G+K+ +++ + + V + R+
Sbjct: 379 TDTYCVMIEGLFNCNKMEDACFLLEEVINEGVKLPYKKFDSFLMQLSVIGDLQAIHRLSE 438
Query: 237 EMRE 240
M++
Sbjct: 439 HMKK 442
>gi|225443152|ref|XP_002263537.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Vitis vinifera]
Length = 537
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 192/397 (48%), Gaps = 16/397 (4%)
Query: 10 DWKRALEFFNWVET-DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
DW+ A FNW E C+ + T VI ILG +F ++W LI + + SS+
Sbjct: 124 DWRLAYWVFNWGEKWGCN---SERTRGLVIWILGNCKKFGVAWCLIREL--HRSSVDTRR 178
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE 127
IM RY A+ +A+ TF+ +++F L D+ ++ L+ ALC++ +V +A+EL F
Sbjct: 179 AMLIMIDRYTAANDPCKAIKTFHIMEKFRLSPDQEAFYTLLTALCKHGNVEDAEELMFQN 238
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSW-WGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
K +T+ +N+IL GW +S + + W EM K +V + +Y++ +
Sbjct: 239 KKLFPL-------ETEGFNIILNGWSNVSLDIFEAKRIWREMSKCCIVPNATTYTLMISC 291
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
K G + +++L+ +MKK+G + YN++I + + A+++ +++EMG Q
Sbjct: 292 FSKFGNLFDSLRLFDDMKKRGWIPGLEVYNSLIYVLTHENCLTEALKILGKIKEMGLQLD 351
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMI 306
+ N +I+ LC+ ++ EA +LA M + P TYH F E + +
Sbjct: 352 SASYNCMIRPLCKAKKLEEARTILAAMIGENLGPTTETYHAFLEGASY-EETFEVLKNLR 410
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
+G P DT++++L + +W +M++ P Y L++ L G L
Sbjct: 411 TAGFGPNGDTFLLILDNLFKLDQPENALKIWVEMKQFDVVPGSEHYKVLIEGLTKFGWLV 470
Query: 367 MARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQSG 403
AR+ EM +KG P+ + K G GE+ G
Sbjct: 471 KARELYAEMRSKGFLDDPKLKKLLKDPVEGDSGEREG 507
>gi|298204688|emb|CBI25186.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 192/397 (48%), Gaps = 16/397 (4%)
Query: 10 DWKRALEFFNWVET-DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
DW+ A FNW E C+ + T VI ILG +F ++W LI + + SS+
Sbjct: 124 DWRLAYWVFNWGEKWGCN---SERTRGLVIWILGNCKKFGVAWCLIREL--HRSSVDTRR 178
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE 127
IM RY A+ +A+ TF+ +++F L D+ ++ L+ ALC++ +V +A+EL F
Sbjct: 179 AMLIMIDRYTAANDPCKAIKTFHIMEKFRLSPDQEAFYTLLTALCKHGNVEDAEELMFQN 238
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSW-WGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
K +T+ +N+IL GW +S + + W EM K +V + +Y++ +
Sbjct: 239 KKLFPL-------ETEGFNIILNGWSNVSLDIFEAKRIWREMSKCCIVPNATTYTLMISC 291
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
K G + +++L+ +MKK+G + YN++I + + A+++ +++EMG Q
Sbjct: 292 FSKFGNLFDSLRLFDDMKKRGWIPGLEVYNSLIYVLTHENCLTEALKILGKIKEMGLQLD 351
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMI 306
+ N +I+ LC+ ++ EA +LA M + P TYH F E + +
Sbjct: 352 SASYNCMIRPLCKAKKLEEARTILAAMIGENLGPTTETYHAFLEGASY-EETFEVLKNLR 410
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
+G P DT++++L + +W +M++ P Y L++ L G L
Sbjct: 411 TAGFGPNGDTFLLILDNLFKLDQPENALKIWVEMKQFDVVPGSEHYKVLIEGLTKFGWLV 470
Query: 367 MARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQSG 403
AR+ EM +KG P+ + K G GE+ G
Sbjct: 471 KARELYAEMRSKGFLDDPKLKKLLKDPVEGDSGEREG 507
>gi|225437663|ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Vitis vinifera]
Length = 526
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 176/372 (47%), Gaps = 16/372 (4%)
Query: 13 RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
+AL FFN+ F HT + ++++ ILG+ FD W L+ M+ S+ + + ++
Sbjct: 108 QALAFFNYTNKRKGFYHTPFSLDTMLYILGRSRRFDQIWELLVDMRRKDQSLISPRSVQV 167
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNV 131
+ R V + + +F K + + D + L+ LC+ K + +A +NV
Sbjct: 168 VLGRIAKVCSVKQTVESFRKFKKLVPEFDTACFNALLRTLCQEKSMRDA--------RNV 219
Query: 132 GFSGLVEMNKT-KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS 190
S + + +N++L GW + F++EM + GV D+ SY+ +D+ CK
Sbjct: 220 YHSLKHDFRPDLRTFNILLSGWKSAE---EAEGFFDEMREMGVEPDVVSYNCLIDVYCKG 276
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTC 250
+ +A K+ +M+ + I DV++Y ++I +G+ D A V +EM+E GC P V
Sbjct: 277 REIERAYKVIDKMRDEQISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVAAY 336
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIE 307
N I+ C R+ +A ++ EM KG P+ TY+ FFRC ++ GL+ RM +
Sbjct: 337 NAAIRNFCIANRLGDADGLMDEMVGKGLSPNATTYNLFFRCFYWSNDLGRSCGLYQRMKK 396
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
+G P + + L R F R + +W M E G + L D L D G L
Sbjct: 397 TGCLPNTQSCMFLTRLFRRQEKVEMALELWNDMVEKGFGSYILVSDVLFDMLCDMGKLVE 456
Query: 368 ARKYDEEMFAKG 379
K +M KG
Sbjct: 457 VEKCCLQMIEKG 468
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 7/190 (3%)
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
+ V+ +++ KK + D +N ++R + + + A VY ++ +P + T N
Sbjct: 180 QTVESFRKFKKLVPEFDTACFNALLRTLCQEKSMRDARNVYHSLKH-DFRPDLRTFNI-- 236
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIR 311
LL EA EM + G PDV++Y+C K REI + D+M + I
Sbjct: 237 -LLSGWKSAEEAEGFFDEMREMGVEPDVVSYNCLIDVYCKGREIERAYKVIDKMRDEQIS 295
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
P + +Y ++ G G V K+M+E GC PD AYNA + L A
Sbjct: 296 PDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVAAYNAAIRNFCIANRLGDADGL 355
Query: 372 DEEMFAKGLS 381
+EM KGLS
Sbjct: 356 MDEMVGKGLS 365
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 122/286 (42%), Gaps = 35/286 (12%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T +N+++ L + + N+ H +K + P+ TF I+ + +A EA G F
Sbjct: 197 TACFNALLRTLCQEKSMRDARNVYHSLKHDFR--PDLRTFNILLSGWKSAE---EAEGFF 251
Query: 91 NKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL------------CFGENKNVGFSGLV 137
+++ E G++ D VSY L+D C+ + + A ++ +G GLV
Sbjct: 252 DEMREMGVEPDVVSYNCLIDVYCKGREIERAYKVIDKMRDEQISPDVISYTSIIGGLGLV 311
Query: 138 -----------EMNK------TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
EM + YN +R + + G +EM +G+ + +Y
Sbjct: 312 GQPDKARDVLKEMKEYGCYPDVAAYNAAIRNFCIANRLGDADGLMDEMVGKGLSPNATTY 371
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+++ S ++ LY+ MKK G + + + R E V+ A+ ++ +M E
Sbjct: 372 NLFFRCFYWSNDLGRSCGLYQRMKKTGCLPNTQSCMFLTRLFRRQEKVEMALELWNDMVE 431
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
G ++ + + +LC+ G++ E +M +KG P +++
Sbjct: 432 KGFGSYILVSDVLFDMLCDMGKLVEVEKCCLQMIEKGHKPSNVSFR 477
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 175/372 (47%), Gaps = 13/372 (3%)
Query: 28 THTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAM 87
T +T Y S+I L FD + L M + P+ T+ ++ ++ EA
Sbjct: 42 TPSTVAYTSLIHGLCMANSFDDARELFADM-NRRGCPPSPVTYNVIIDASCKRGMLEEAC 100
Query: 88 GTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYN 146
K+ E G + D V+Y ++D LC+ V EA L F E + +G + + +N
Sbjct: 101 DLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEAL-LLFNEMERLGCT-----PNRRSHN 154
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
I+ G + S + + + EM+ R + D SY I +D + K+GK +A KL++ M
Sbjct: 155 TIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDS 214
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
GI V YN VI + ++ +D A+ +++ MR GC+PS T N +I C+ G++ EA
Sbjct: 215 GITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEA 274
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRK 323
+ +L M G VPDV+TY L + + L + M++ +P + T L+
Sbjct: 275 FRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHG 334
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAK 383
+ G ++ V M G SPD YN LV G + AR+ +M A+GL+
Sbjct: 335 LCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLA-- 392
Query: 384 PREELGTKLVQG 395
P T LV G
Sbjct: 393 PNVVTYTALVSG 404
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 175/405 (43%), Gaps = 18/405 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + +A + F+ +E + +Y +ID L K + + ++ L RM D+ P
Sbjct: 161 CQQSKIDQACQVFHEMEAR-DIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDS-GITP 218
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ ++ A+ ++EA+ F + G + ++ L+DA C+ + EA L
Sbjct: 219 SAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLL 278
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
K + G V Y+ ++ G ++ R E+M KR + + + +
Sbjct: 279 ----KRMTDDGHVP--DVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLI 332
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+CK+G+ +A ++ M G DVV YNT++ + + A + +M G
Sbjct: 333 HGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLA 392
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---L 301
P+VVT ++ LC+ R+ EA V A+M GC P++ TY ++ G L
Sbjct: 393 PNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKL 452
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWG-FLRPVFVVWKKMEELGCSP--DEFAYNALVDA 358
F M+ +GI P Y L + + G R + ++ + E L DE Y VD
Sbjct: 453 FGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV-YRFAVDG 511
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQSG 403
L+D G ++MA + +M G P E LV G Q G
Sbjct: 512 LLDAGKMEMALGFVRDMVRGG--QLPAPERCASLVAGLCKSGQGG 554
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 107/217 (49%), Gaps = 3/217 (1%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M++R V D SY I +D + K+GK A L++++ G+ VAY ++I + ++
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
D A ++ +M GC PS VT N +I C+ G + EA ++ +M + G VPDV+TY+
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 288 FFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
L K E L LF+ M G P ++ ++ + + V+ +ME
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
PD ++Y L+D L G L+ A K M G++
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGIT 217
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 115/273 (42%), Gaps = 38/273 (13%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y +++ G K R+ ++++ GV +Y+ + +C + A +L+ +M
Sbjct: 13 YGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 72
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
++G V YN +I A ++ A + ++M E G P VVT NTV+ LC++GRV
Sbjct: 73 RRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVE 132
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL-------------------------------- 292
EA + EM + GC P+ +++ L
Sbjct: 133 EALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILI 192
Query: 293 ------EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
K E LF RM++SGI P TY +++ L ++K M GC
Sbjct: 193 DGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCR 252
Query: 347 PDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
P F +N L+DA +G +D A + + M G
Sbjct: 253 PSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDG 285
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 129/336 (38%), Gaps = 71/336 (21%)
Query: 6 CYANDWKRALEFFNWVET-DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C A ALE F + + C + T +N +ID K + D ++ L+ RM D+ +
Sbjct: 231 CLAYTLDEALELFKSMRSKGCRPSRFT--FNILIDAHCKRGKMDEAFRLLKRMTDD-GHV 287
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQEL 123
P+ T+ + + V++A + + K V N L+ LC+ + EA+E+
Sbjct: 288 PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 347
Query: 124 -----CFGENKNVGF----------SGLVEMNKTKIYNMILRGW------FKMSWWGKCR 162
G++ +V +G E + + +M+ RG + G C+
Sbjct: 348 LDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCK 407
Query: 163 E--------FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVA 214
+ +M G +L +Y+ + C +G+ +KL+ EM GI D V
Sbjct: 408 ANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVV 467
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREM--------------------------------- 241
Y T+ + S A+ + RE RE
Sbjct: 468 YGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRD 527
Query: 242 ----GCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
G P+ C +++ LC++G+ EA AVL E+
Sbjct: 528 MVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 563
>gi|115480461|ref|NP_001063824.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|32526676|dbj|BAC79199.1| chloroplast RNA processing 1 -like protein [Oryza sativa Japonica
Group]
gi|113632057|dbj|BAF25738.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|125606498|gb|EAZ45534.1| hypothetical protein OsJ_30195 [Oryza sativa Japonica Group]
gi|215768653|dbj|BAH00882.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 543
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 183/365 (50%), Gaps = 31/365 (8%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI- 72
A+ FF+ V Y ++ID+L K F L+ +L+ M++ S+P A +
Sbjct: 127 AVAFFHHVLPSLPPDSLPALYAAMIDLLAKHHHFPLARHLLDEMRER--SVPISAQLILA 184
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFGL--KDEVSYCNLVDALCEYKHVIEAQELCFGENKN 130
+ +RYV A + +EA F +++E+G D + +L+ AL + + EAQ + F K+
Sbjct: 185 LIRRYVRAEMPSEASDLFRRMEEYGAGAPDPATLASLLGALSKKRLASEAQAM-FDSYKS 243
Query: 131 VGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS 190
V +V +Y ++ W + + + EM + GV ++++Y+ +D M ++
Sbjct: 244 VFTPDVV------LYTTLVHAWCRSGRLNEAERVFAEMQQAGVTPNVYTYTAVIDAMYRA 297
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA---VGVSEGVDFAMRVYREMREMGCQPSV 247
G+ +A +L +M G + +N ++RA G SE V ++V+ +MR++GC+P +
Sbjct: 298 GQVPRAQELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQV---LQVHNQMRQLGCEPDI 354
Query: 248 VTCNTVIKLLCENGR--VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG----- 300
+T N +++ C G+ + A +L M KGC+PD T++ + + +LG
Sbjct: 355 ITYNFLMETHCGKGQSNLDAAMKMLTRMIAKGCIPDCHTFNPMLKLV----LVLGNVNAA 410
Query: 301 --LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
L++RM E +P + TY +L+R F + V + K M+ G P+ Y AL++A
Sbjct: 411 RKLYERMQELQCKPNVVTYNLLMRLFNLEKSMDMVLRIKKDMDAQGVEPNVNTYAALIEA 470
Query: 359 LIDKG 363
+G
Sbjct: 471 FCGRG 475
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 67/169 (39%), Gaps = 5/169 (2%)
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
Y +I + A + EMRE S +I+ EA + M
Sbjct: 147 YAAMIDLLAKHHHFPLARHLLDEMRERSVPISAQLILALIRRYVRAEMPSEASDLFRRME 206
Query: 275 KKGC-VPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
+ G PD T L K R E +FD +S P + Y L+ + R G L
Sbjct: 207 EYGAGAPDPATLASLLGALSKKRLASEAQAMFDS-YKSVFTPDVVLYTTLVHAWCRSGRL 265
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
V+ +M++ G +P+ + Y A++DA+ G + A++ +M G
Sbjct: 266 NEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSG 314
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 177/371 (47%), Gaps = 15/371 (4%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T T+ ++I+ L K EF + L M P+ T+ + A G
Sbjct: 160 TIITFTTLINGLCKAGEFAQALELFDDMVARGCQ-PDVYTYTTIINGLCKMGETAAAAGL 218
Query: 90 FNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
K+ E G + D V+Y L+D+LC+ + V EA ++ F K G S V Y +
Sbjct: 219 IKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDI-FSYMKAKGISPTVVS-----YTSL 272
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
++G S W + EM ++ D+ ++S+ +DI CK G +A + K M + G+
Sbjct: 273 IQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGV 332
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ +V+ YN+++ + V A +++ M GC+P V + + +I C R+ EA
Sbjct: 333 EPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQ 392
Query: 269 VLAEMPKKGCVPDVITY----HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
+ EM +G P+ ++Y H F + L K RE LF M +G P + TY +LL F
Sbjct: 393 LFNEMIHQGLTPNTVSYTTLIHAFCQ-LGKLREARELFKDMHTNGYLPDLCTYSVLLEGF 451
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
+ G+L F +++ M+ P+ Y L+D++ G L+ ARK E+F GL +P
Sbjct: 452 CKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGL--QP 509
Query: 385 REELGTKLVQG 395
++ T ++ G
Sbjct: 510 DVQIYTTIING 520
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 163/347 (46%), Gaps = 22/347 (6%)
Query: 55 HRMKDNPSSIPN----HATFRIMFKRYVTAHLV--NEAMGTFNKLDEF-----GLKDEVS 103
H+ D SS N A+F M R ++ N+ + ++ ++ L ++
Sbjct: 59 HKNDDASSSFRNIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQME 118
Query: 104 YCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI------YNMILRGWFKMSW 157
L C +I C ++ ++GFS L ++ K + + ++ G K
Sbjct: 119 LAGLSPNTCTLNILINC--FCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGE 176
Query: 158 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
+ + E +++M RG D+++Y+ ++ +CK G+ A L K+M + G + DVV Y+T
Sbjct: 177 FAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYST 236
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
+I ++ V+ A+ ++ M+ G P+VV+ ++I+ LC R +EA A+L EM
Sbjct: 237 LIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLN 296
Query: 278 CVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
+PD++T+ K +L G+ M E G+ P + TY L+ + +
Sbjct: 297 IMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEAR 356
Query: 335 VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
++ M GC PD F+Y+ L++ +D A++ EM +GL+
Sbjct: 357 KLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLT 403
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 135/286 (47%), Gaps = 9/286 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + WK A N + T + T++ +IDI K + ++ M + P
Sbjct: 277 CSFSRWKEASAMLNEM-TSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVE-P 334
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELC 124
N T+ + Y V EA F+ + G K +V SY L++ C K + EA++L
Sbjct: 335 NVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQL- 393
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F E + G + T Y ++ + ++ + RE +++M G + DL +YS+ +
Sbjct: 394 FNEMIHQGLTP-----NTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLL 448
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ CK G KA +L++ M+ +K ++V Y +I ++ S ++ A +++ E+ G Q
Sbjct: 449 EGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQ 508
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR 290
P V T+I LC+ G + EA +M + GC P+ +Y+ R
Sbjct: 509 PDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIR 554
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 108/218 (49%), Gaps = 7/218 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ ++ I+ Y ++EA FN++ GL + VSY L+ A C+ + EA+EL
Sbjct: 369 PDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREAREL 428
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + G+ + Y+++L G+ K + GK + M + +L Y+I
Sbjct: 429 -FKDMHTNGY-----LPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTIL 482
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D MCKSG A KL+ E+ G++ DV Y T+I + +D A+ +R+M E GC
Sbjct: 483 IDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGC 542
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
P+ + N +I+ ++ A ++ EM KG V D
Sbjct: 543 PPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Query: 212 VVAYNTVIRA-VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
++ +N ++ A V + + D + + ++M G P+ T N +I C V ++VL
Sbjct: 90 IIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVL 149
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
A++ K G P +IT+ L K E L LFD M+ G +P + TY ++ +
Sbjct: 150 AKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKM 209
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREE 387
G + KKM E+GC PD Y+ L+D+L +++ A M AKG+S P
Sbjct: 210 GETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGIS--PTVV 267
Query: 388 LGTKLVQG 395
T L+QG
Sbjct: 268 SYTSLIQG 275
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 186/403 (46%), Gaps = 35/403 (8%)
Query: 25 CHFTHTTDTYNSVIDILGKFFEFDLSWN------LIHRMKDNPSSI-------------- 64
CH H D ++ +LG F+ L N L++ + I
Sbjct: 21 CHSNH--DHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGY 78
Query: 65 -PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
P+ T+ + A+ K++E G K + V Y ++D+LC+ K + EA E
Sbjct: 79 EPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAME 138
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
E N G S V Y+ IL G+ + + +++M +R V+ D +++I
Sbjct: 139 F-LSEMVNRGISPNV-----VTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNI 192
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D + K G +A +++ M +KG++ +V YN ++ +D A +++ M G
Sbjct: 193 LVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKG 252
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREIL 299
C PSV + N +IK C++GR+ EA +LAEM K PD +TY + C + +P++
Sbjct: 253 CAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQ 312
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
L + M G+ P + TY ++L + G L F + K M+E P+ F Y L+ +
Sbjct: 313 KLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGM 372
Query: 360 IDKGMLDMARKYDEEMFAKGLSAK--PREELGTKLVQGGLDGE 400
+ G L+ AR+ +F KG+ + + L++GGL E
Sbjct: 373 CNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNE 415
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 161/356 (45%), Gaps = 17/356 (4%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
Y+++ID L K + + M + S PN T+ + + NEA F ++
Sbjct: 120 YSTIIDSLCKDKLITEAMEFLSEMVNRGIS-PNVVTYSSILHGFCNLGRSNEATSLFKQM 178
Query: 94 DEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
E + D V++ LVD L + ++EAQ C E VE N YN ++ G+
Sbjct: 179 VERNVMPDTVTFNILVDGLSKEGMILEAQ--CVFETM---IEKGVEPN-VNTYNALMDGY 232
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
S + ++ + M ++G + SY+I + CKSG+ +A L EM K + D
Sbjct: 233 CSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDT 292
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V Y+T+++ A ++ EMR G P ++T + V+ LC+ G + EA+ +L
Sbjct: 293 VTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKA 352
Query: 273 MPKKGCVPDVITYH------CFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
M + P++ Y C F LE RE LF + GI+P + TY +++ +
Sbjct: 353 MQESKIEPNIFIYTILIQGMCNFGKLEAARE---LFSNLFVKGIQPDVVTYTVMISGLLK 409
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
G +++ M GC P+ YN ++ + G A + EEM +G SA
Sbjct: 410 GGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSA 465
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 119/266 (44%), Gaps = 22/266 (8%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
PN T+ + Y + ++EA FN + G V SY L+ C+ + EA+ L
Sbjct: 220 PNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGL 279
Query: 124 CFGENKNVGFSGLVEMNK------TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
L EM+ T Y+ +++G+ + ++ EEM G++ DL
Sbjct: 280 ------------LAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDL 327
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
+YSI +D +CK G +A +L K M++ I+ ++ Y +I+ + ++ A ++
Sbjct: 328 MTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSN 387
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
+ G QP VVT +I L + G EA + +M GC+P+ TY+ + + +
Sbjct: 388 LFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGD 447
Query: 298 ILG---LFDRMIESGIRPKMDTYVML 320
L + M+ G T+ ML
Sbjct: 448 TSNAGRLIEEMVGRGFSADSSTFQML 473
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 167/353 (47%), Gaps = 11/353 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS+ID L K E D + L MK S P+ T+ + + AM F +
Sbjct: 12 TYNSLIDGLCKNNEPDRAQELFEHMKSVECS-PSMVTYNTLLDGLFRTGKLERAMALFQE 70
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ + D +S+ LV LC + A E F + + ++ Y++++ G
Sbjct: 71 MLDRRSHDVISFNILVTGLCRAGKIETALEF-FRKMDDRCSPNVIT------YSVLIDGL 123
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K + + E E M RG D+ +Y+I +D +CK K A ++ +EM G ++
Sbjct: 124 CKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNL 183
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V YN+++ + + V A+ + R+M GC P+VVT T+I LC+ GRV++A A+LA+
Sbjct: 184 VTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLAD 243
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M KG PD++ Y+ L K ++ + L R + GI+P + TY ++ R
Sbjct: 244 MIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNR 303
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
L + ++ GC PD Y+ L+D L G +D A E M G A
Sbjct: 304 LDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDA 356
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 173/402 (43%), Gaps = 35/402 (8%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C N+ RA E F +++ + + TYN+++D L + + + + L M D S
Sbjct: 21 CKNNEPDRAQELFEHMKS-VECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSH-- 77
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQEL-- 123
+ +F I+ A + A+ F K+D+ + ++Y L+D LC+ V +A EL
Sbjct: 78 DVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLIDGLCKANRVSQAVELLE 137
Query: 124 ------CFGE--NKNVGFSGLVEMNKTK-------------------IYNMILRGWFKMS 156
C + + GL + +K YN +L G +
Sbjct: 138 SMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRAR 197
Query: 157 WWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
+M RG ++ +Y +D +CK G+ A + +M KG D++ YN
Sbjct: 198 RVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYN 257
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
+I + ++ VD ++ + R G +P VVT ++VI LC + R+ EA +L + +
Sbjct: 258 MLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSR 317
Query: 277 GCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
GC PDVI Y L K E L++ M G + TY L+ + G +
Sbjct: 318 GCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEA 377
Query: 334 FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
++ +M +G P YN+L+ L D LD A + EEM
Sbjct: 378 HLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEM 419
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 168/389 (43%), Gaps = 32/389 (8%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A + ALEFF ++ C + TY+ +ID L K + L+ MK S P
Sbjct: 90 CRAGKIETALEFFRKMDDRC--SPNVITYSVLIDGLCKANRVSQAVELLESMKARGCS-P 146
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNK-LDEFGLKDEVSYCNLVDALCEYKHVIEAQEL- 123
+ T+ I+ V A + LD + + V+Y +L+ LC + V +A L
Sbjct: 147 DVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALM 206
Query: 124 ----CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
C G NV Y ++ G K+ +M +G DL
Sbjct: 207 RDMTCRGCTPNV-----------VTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMI 255
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y++ ++ +CK+ + +++ L + GIK DVV Y++VI + S +D A R+ ++
Sbjct: 256 YNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVK 315
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---R 296
GC P V+ +T+I LC+ G+V EA+ + M GC DV+TY L K
Sbjct: 316 SRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVD 375
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
E L RM+ G P TY L++ L + ++ME C+P YN L+
Sbjct: 376 EAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILI 435
Query: 357 DAL-----IDKGMLDMARKYDEEMFAKGL 380
+ +D LD Y +EM G+
Sbjct: 436 HGMCRMERVDSAALD----YFQEMIDNGV 460
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 159/380 (41%), Gaps = 49/380 (12%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C AN +A+E ++ + TY ++D L K + +W ++ M D +P
Sbjct: 124 CKANRVSQAVELLESMKAR-GCSPDVITYTILVDGLCKESKVAAAWEVLREMLD-AGCVP 181
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N T+ + A V++A+ + G + V+Y L+D LC+ V +A +
Sbjct: 182 NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAML 241
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSW--------------------------- 157
G L+ IYNM++ G K
Sbjct: 242 ADMIDKGGTPDLM------IYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVI 295
Query: 158 WGKCRE--------FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
+G CR + RG D+ YS +D +CK+GK +A LY+ M G
Sbjct: 296 YGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCD 355
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
DVV Y+T+I + + VD A + M MG PS +T N++IK LC+ + EA +
Sbjct: 356 ADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIEL 415
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREI----LGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ EM + C P +TY+ + + + L F MI++G+ P TY +LL
Sbjct: 416 VEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLK 475
Query: 326 RWGFLRPV-FVVWKKMEELG 344
+ L + +V +M +LG
Sbjct: 476 KSKDLHELRHLVLDQMVQLG 495
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 127/285 (44%), Gaps = 13/285 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY ++ID L K + ++ M D + P+ + ++ A V+E++ +
Sbjct: 220 TYGTLIDGLCKVGRVKDACAMLADMIDKGGT-PDLMIYNMLINGLCKADQVDESIALLRR 278
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
G+K D V+Y +++ LC + EA L ++ +Y+ ++ G
Sbjct: 279 AVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVI------LYSTLIDG 332
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + + +E M G D+ +YS +D +CK+G+ +A L M + G
Sbjct: 333 LCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPS 392
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV-REAYAVL 270
+ YN++I+ + +D A+ + EM C PS VT N +I +C RV A
Sbjct: 393 TMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYF 452
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPREILGL----FDRMIESGIR 311
EM G +PD ITY L+K +++ L D+M++ G R
Sbjct: 453 QEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLGYR 497
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 117/270 (43%), Gaps = 38/270 (14%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M G ++ +Y+ +D +CK+ +P +A +L++ MK +V YNT++ + +
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 228 VDFAMRVYREM-------------------------------REMG--CQPSVVTCNTVI 254
++ AM +++EM R+M C P+V+T + +I
Sbjct: 61 LERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLI 120
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIR 311
LC+ RV +A +L M +GC PDVITY L K ++ + M+++G
Sbjct: 121 DGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCV 180
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
P + TY LL R + + + M GC+P+ Y L+D L G + A
Sbjct: 181 PNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAM 240
Query: 372 DEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
+M KG P + L+ G +Q
Sbjct: 241 LADMIDKG--GTPDLMIYNMLINGLCKADQ 268
>gi|449436637|ref|XP_004136099.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Cucumis sativus]
gi|449509164|ref|XP_004163514.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Cucumis sativus]
Length = 547
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 184/379 (48%), Gaps = 14/379 (3%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
+DWK +L F W E + N +I +LG +F +W+LI + + S + +
Sbjct: 127 DDWKSSLLAFKWGEKVGAIDE--EICNLMIWVLGNHKKFSTAWSLIREL--HGSLLNSMQ 182
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGE 127
+M RY A+ ++A+ TF+ +++F L D+ ++ L+++LC+Y ++ EA+E F
Sbjct: 183 AMLVMIDRYAYANEASKAIKTFHMMEKFRLTPDQEAFHVLLNSLCKYGNIEEAEEFMFVN 242
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSW-WGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
K T+ +N+IL GW ++ + + W EM K ++ D SY+ +
Sbjct: 243 KKLFPLG-------TESFNIILNGWCNVTVDVFEAKRIWREMSKCCILPDSTSYTHMISC 295
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
K+G + +++ Y +MKK+ V YN++ + + A+++ +++E+G +P
Sbjct: 296 FSKNGNLFDSLRFYDQMKKRDWIPSVEVYNSLAYVLTRENCFNEALKILEKIKEVGLRPD 355
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMI 306
T N++I LCE G++ EA VL M + P + TYH F + + + L RM
Sbjct: 356 STTYNSLISPLCEAGKLDEAKDVLTMMTEDNISPTIETYHSFIQAADS-KMSFELLKRMR 414
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
+ G+ P T++++ K VW +M+ P Y+ L+ L G L
Sbjct: 415 QDGLGPTEGTFLIMFNKSFELEEPEYALNVWVEMKRYEVFPSCEHYSVLIQGLATCGHLK 474
Query: 367 MARKYDEEMFAKGLSAKPR 385
AR+ +EM G A P+
Sbjct: 475 KARELYDEMILHGFIAHPK 493
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 180/381 (47%), Gaps = 17/381 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + AL+ F+ F TYN++I+ K + D + ++ RM + + +P
Sbjct: 56 CKVGELDEALKIFDGA-VKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMV-SENLVP 113
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALC-EYKHVIEAQELC 124
+ T+ + V+EA +D+ + ++Y L+ LC E + V EA +L
Sbjct: 114 DVVTYNSLVNGLCKNGRVDEARMLI--VDKGFSPNVITYSTLISGLCRELRGVSEALKL- 170
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
FG G+ + YN+++ G K + E + + K G+ D +Y++++
Sbjct: 171 FGSVLKQGYE-----PEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFI 225
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D +CK+G+ A+ + K+M +KG DVV++N VI + + VD A + M GC
Sbjct: 226 DGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCS 285
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR------EI 298
P+ ++ NT+I C G+ ++A EM K+G P V+TY+ L K R E
Sbjct: 286 PNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEA 345
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+ LFD MIE G P + TY L+ G+ G L + ME GC P+ + YN+L+
Sbjct: 346 ITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISG 405
Query: 359 LIDKGMLDMARKYDEEMFAKG 379
L +D A + M KG
Sbjct: 406 LCGLEKVDEALELFVAMVEKG 426
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 138/277 (49%), Gaps = 14/277 (5%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
AL+ F V + TYN +ID L K + ++ L + + P+ T+ +
Sbjct: 167 ALKLFGSVLKQ-GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLE-PDAITYTVF 224
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFG-ENKNV 131
A V +A+ +DE G + D VS+ +++ LC+ K V EA+ L G E K
Sbjct: 225 IDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGC 284
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS- 190
+ + +N ++ G + W K ++EM KRGV + +Y+I +D +CK+
Sbjct: 285 SPNAIS-------FNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKAR 337
Query: 191 --GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
G+ +A+ L+ M +KG DVV Y+ +I +G + +D A R+ M GC P+V
Sbjct: 338 QEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVY 397
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
T N++I LC +V EA + M +KGCVPD ITY
Sbjct: 398 TYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITY 434
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 115/239 (48%), Gaps = 7/239 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN +L G + +E M K G D+ +Y+ + CK G+ +A+K++
Sbjct: 13 YNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAV 72
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K+G DVV YN +I ++ +D A R+ + M P VVT N+++ LC+NGRV
Sbjct: 73 KRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVD 132
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFF----RCLEKPREILGLFDRMIESGIRPKMDTYVML 320
EA ++ + KG P+VITY R L E L LF +++ G P++ TY +L
Sbjct: 133 EARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNIL 189
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ + + F ++ + + G PD Y +D L G ++ A ++M KG
Sbjct: 190 IDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKG 248
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 142/286 (49%), Gaps = 13/286 (4%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWG 159
+ ++Y L+ LC + +AQ L + G+S V YN +L G+ K+
Sbjct: 9 NRITYNALLSGLCNGGRMSDAQAL-YERMIKAGYSPDV-----VTYNTLLHGFCKVGELD 62
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+ + ++ KRG V D+ +Y+ ++ CK+ K +A ++ + M + + DVV YN+++
Sbjct: 63 EALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLV 122
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR-VREAYAVLAEMPKKGC 278
+ + VD A + + + G P+V+T +T+I LC R V EA + + K+G
Sbjct: 123 NGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGY 179
Query: 279 VPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFV 335
P+V TY+ L ++ E LF +++ G+ P TY + + + G + +
Sbjct: 180 EPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALL 239
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ K M+E GC PD ++NA+++ L + +D A M AKG S
Sbjct: 240 MLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCS 285
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 127/260 (48%), Gaps = 13/260 (5%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P T+ I+ + VNEA F+ L + GL+ D ++Y +D LC+ V +A +
Sbjct: 181 PEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLM 240
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
K++ G V +N ++ G K + M+ +G + S++
Sbjct: 241 L----KDMDEKGCVP--DVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTL 294
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV--GVSEG-VDFAMRVYREMRE 240
+ C++GK KA+ +KEM K+G+K VV YN ++ + EG + A+ ++ M E
Sbjct: 295 ICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIE 354
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--C-LEKPRE 297
G P VVT + +I L + G++ +A +L M KGC+P+V TY+ C LEK E
Sbjct: 355 KGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDE 414
Query: 298 ILGLFDRMIESGIRPKMDTY 317
L LF M+E G P TY
Sbjct: 415 ALELFVAMVEKGCVPDTITY 434
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 155/348 (44%), Gaps = 24/348 (6%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PN T+ + +++A + ++ + G D V+Y L+ C+ + EA ++
Sbjct: 8 PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKI 67
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
G K GF + YN ++ G+ K + + + M +V D+ +Y+
Sbjct: 68 FDGAVKR-GF-----VPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSL 121
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV-----GVSEGVDFAMRVYREM 238
++ +CK+G+ +A L + KG +V+ Y+T+I + GVSE A++++ +
Sbjct: 122 VNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSE----ALKLFGSV 174
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI 298
+ G +P V T N +I L + RV EA+ + + + K G PD ITY F L K +
Sbjct: 175 LKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRV 234
Query: 299 ---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
L + M E G P + ++ ++ + + V+ ME GCSP+ ++N L
Sbjct: 235 EDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTL 294
Query: 356 VDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQSG 403
+ G A +EM +G+ KP LV G Q G
Sbjct: 295 ICGQCRAGKWKKAMTTFKEMLKRGV--KPTVVTYNILVDGLCKARQEG 340
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
++N+VI+ L K D + L+ M+ S PN +F + A +AM TF +
Sbjct: 255 SHNAVINGLCKEKRVDEAEVLLSGMEAKGCS-PNAISFNTLICGQCRAGKWKKAMTTFKE 313
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKH---VIEAQELCFGENKNVGFSGLVEMNKTK---IY 145
+ + G+K V +Y LVD LC+ + + EA L F ++E + Y
Sbjct: 314 MLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITL---------FDAMIEKGRVPDVVTY 364
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
+ ++ G K R M+ +G + ++++Y+ + +C K +A++L+ M +
Sbjct: 365 SALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVE 424
Query: 206 KGIKMDVVAYNTVIRA 221
KG D + Y T+I A
Sbjct: 425 KGCVPDTITYGTIISA 440
>gi|224111364|ref|XP_002315827.1| predicted protein [Populus trichocarpa]
gi|222864867|gb|EEF01998.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 188/405 (46%), Gaps = 31/405 (7%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILG----KFFEFDLSWNLIHRMKDNPSSIPNH 67
K + FF W +++H YN +IDIL K +F + +++ MK N ++
Sbjct: 44 KTSFRFFMWAGHQKNYSHEPCAYNEMIDILTSTKYKARQFRIVCDMLDYMKRNNKNVVPV 103
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV-DALCEYKHVIEAQELCFG 126
+ + Y +L K + E++ NL+ DALC+ C
Sbjct: 104 EVLLTILRNYTEKYLTRVQKFAKKKRIRVKTQPEINAFNLLLDALCK---------CCLA 154
Query: 127 ENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
E+ GL + K K+ YN++ GW ++ + + EEM + G D +Y
Sbjct: 155 EDA----EGLFKRVKNKVKPDANTYNVMFFGWCRVRNPTRGMKVLEEMIQLGHTPDSFTY 210
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD---VVAYNTVIRAVGVSEGVDFAMRVYRE 237
+D C++G +A +L++ M+ KG M Y +I A+ + +D ++ +
Sbjct: 211 ITAIDAFCRAGMVNEAAELFEFMRTKGSTMSSPTAKTYAIMIGALVRNNRMDECFKLLED 270
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EK 294
M GC P V T +I+ +C G++ EAY L EM KG PD++TY+CF + L +
Sbjct: 271 MINSGCLPDVSTFKELIEGMCSAGKIDEAYRFLQEMGNKGYPPDIVTYNCFLKVLCENKN 330
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
E L L++RMIE+G P + T+ ML+ F G F W +M++ GC+ D Y
Sbjct: 331 SEEALRLYERMIEAGCFPSVQTHNMLISMFFEMGDPDGAFETWYEMDKRGCAQDVDTYIV 390
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDG 399
++D L ++ A E++ KG+ P ++ + L+Q + G
Sbjct: 391 MIDGLFGCNKVEDACFLIEDIVNKGMKL-PYQKFDSFLMQLSVIG 434
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 108/243 (44%), Gaps = 22/243 (9%)
Query: 6 CYANDWKRALEFFNWVET--DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
C A A E F ++ T + T TY +I L + D + L+ M N
Sbjct: 218 CRAGMVNEAAELFEFMRTKGSTMSSPTAKTYAIMIGALVRNNRMDECFKLLEDMI-NSGC 276
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK----DEVSYCNLVDALCEYKHVIE 119
+P+ +TF+ + + +A ++EA + L E G K D V+Y + LCE K+ E
Sbjct: 277 LPDVSTFKELIEGMCSAGKIDEA---YRFLQEMGNKGYPPDIVTYNCFLKVLCENKNSEE 333
Query: 120 AQELCFGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
A L + ++E + +NM++ +F+M E W EMDKRG +D
Sbjct: 334 ALRL---------YERMIEAGCFPSVQTHNMLISMFFEMGDPDGAFETWYEMDKRGCAQD 384
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
+ +Y + +D + K A L +++ KG+K+ +++ + + V + R+
Sbjct: 385 VDTYIVMIDGLFGCNKVEDACFLIEDIVNKGMKLPYQKFDSFLMQLSVIGNIRAIHRLSE 444
Query: 237 EMR 239
MR
Sbjct: 445 HMR 447
>gi|125564557|gb|EAZ09937.1| hypothetical protein OsI_32236 [Oryza sativa Indica Group]
Length = 544
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 183/365 (50%), Gaps = 31/365 (8%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI- 72
A+ FF+ V Y ++ID+L K F L+ +L+ M++ S+P A +
Sbjct: 128 AVAFFHHVLPSLPPDSLPALYAAMIDLLAKHHHFPLARHLLDEMRER--SVPISAQLILA 185
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFGL--KDEVSYCNLVDALCEYKHVIEAQELCFGENKN 130
+ +RYV A + +EA F +++E+G D + +L+ AL + + EAQ + F K+
Sbjct: 186 LIRRYVRAEMPSEASDLFRRMEEYGAGAPDPATLASLLGALSKKRLASEAQAM-FDSYKS 244
Query: 131 VGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS 190
V +V +Y ++ W + + + EM + GV ++++Y+ +D M ++
Sbjct: 245 VFTPDVV------LYTTLVHAWCRSGRLDEAERVFAEMQQAGVTPNVYTYTAVIDAMYRA 298
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA---VGVSEGVDFAMRVYREMREMGCQPSV 247
G+ +A +L +M G + +N ++RA G SE V ++V+ +MR++GC+P +
Sbjct: 299 GQVPRAQELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQV---LQVHNQMRQLGCEPDI 355
Query: 248 VTCNTVIKLLCENGR--VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG----- 300
+T N +++ C G+ + A +L M KGC+PD T++ + + +LG
Sbjct: 356 ITYNFLMETHCGKGQSNLDAAMKMLTRMIAKGCIPDCHTFNPMLKLV----LVLGNVNAA 411
Query: 301 --LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
L++RM E +P + TY +L+R F + V + + M+ G P+ Y AL++A
Sbjct: 412 RKLYERMQELQCKPNVVTYNLLMRLFNLEKSMDMVLRIKRDMDAQGVEPNVNTYAALIEA 471
Query: 359 LIDKG 363
+G
Sbjct: 472 FCGRG 476
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 67/169 (39%), Gaps = 5/169 (2%)
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
Y +I + A + EMRE S +I+ EA + M
Sbjct: 148 YAAMIDLLAKHHHFPLARHLLDEMRERSVPISAQLILALIRRYVRAEMPSEASDLFRRME 207
Query: 275 KKGC-VPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
+ G PD T L K R E +FD +S P + Y L+ + R G L
Sbjct: 208 EYGAGAPDPATLASLLGALSKKRLASEAQAMFDS-YKSVFTPDVVLYTTLVHAWCRSGRL 266
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
V+ +M++ G +P+ + Y A++DA+ G + A++ +M G
Sbjct: 267 DEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSG 315
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 165/358 (46%), Gaps = 31/358 (8%)
Query: 35 NSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLD 94
N+++ LG+ EF L+ MK+ PN TF I+ V+EA+ F K++
Sbjct: 309 NALLTALGRAREFKRMNTLLAEMKEMDIQ-PNVVTFGILINHLCKFRRVDEALEVFEKMN 367
Query: 95 ---EFGL---KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVE--------MN 140
G D ++Y L+D LC+ E GLVE M
Sbjct: 368 GGESNGFLVEPDVITYNTLIDGLCKVGRQEEGL-------------GLVERMRSQPRCMP 414
Query: 141 KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
T YN ++ G+ K S RE +++M+K GV ++ + + +D MCK G+ AV+ +
Sbjct: 415 NTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFF 474
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
EM+ KG+K + V Y +IRA ++ AM ++ EM E GC P + T+I L +
Sbjct: 475 NEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQA 534
Query: 261 GRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTY 317
G++ A VL++M + G PD+++++ K E + M +GI+P TY
Sbjct: 535 GKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTY 594
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
L+ F + G + KKM + G P Y AL+ A G LD A K +M
Sbjct: 595 NTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDM 652
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 157/365 (43%), Gaps = 46/365 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++ID L K + L+ RM+ P +PN T+ + Y A ++ A F++
Sbjct: 382 TYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQ 441
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+++ G+ V N LVD +C++ + A E F E + G G Y ++R
Sbjct: 442 MNKDGVPPNVVTLNTLVDGMCKHGRINGAVEF-FNEMQGKGLKG-----NAVTYTALIRA 495
Query: 152 WFKMSWWGKCREFWEEM-----------------------------------DKRGVVKD 176
+ ++ K E ++EM + G D
Sbjct: 496 FCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPD 555
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
+ S+++ ++ C+ K +A ++ KEM+ GIK D V YNT+I + A R+ +
Sbjct: 556 IVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMK 615
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV-PDVITYHCFFRCLEKP 295
+M + G P+VVT +I C NG + EA + +M V P+ + Y+ L +
Sbjct: 616 KMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRK 675
Query: 296 REI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
++ L L D M G++P +T+ + + +L F + +M E C+PD
Sbjct: 676 NQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITM 735
Query: 353 NALVD 357
L +
Sbjct: 736 EILTE 740
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 170/405 (41%), Gaps = 52/405 (12%)
Query: 25 CHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDN-----PSSIPNHATFRIMFKRYVT 79
C T N +ID+L + D + +L+ M P+S H F + KR
Sbjct: 186 CPSRRLTHIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKV 245
Query: 80 AHLVNEA--MGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGF--- 133
V+E +G +K E + + + L+ LC A ++ G K G
Sbjct: 246 GRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEA 305
Query: 134 --------------------SGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEE 167
+ L EM + I + +++ K + E +E+
Sbjct: 306 ASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEK 365
Query: 168 MD---KRG--VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM-DVVAYNTVIRA 221
M+ G V D+ +Y+ +D +CK G+ + + L + M+ + M + V YN +I
Sbjct: 366 MNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDG 425
Query: 222 VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
+ ++ A ++ +M + G P+VVT NT++ +C++GR+ A EM KG +
Sbjct: 426 YCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGN 485
Query: 282 VITYHCFFRC------LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFV 335
+TY R +EK E LFD M+E+G P Y L+ + G L
Sbjct: 486 AVTYTALIRAFCNVNNIEKAME---LFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASF 542
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
V KM+E G SPD ++N L++ K LD A + +EM G+
Sbjct: 543 VLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGI 587
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 176/410 (42%), Gaps = 71/410 (17%)
Query: 13 RALEFFNWVETDC-----------------HFTHTTDTYNSVIDILGKFFEFDLSWNLIH 55
+AL+FFNWV+ + H + +++N ++D+ F S + H
Sbjct: 102 KALKFFNWVQANSPCQDSPLLSFTLEAVFEHASREPNSHNKLLDL------FKTSKS--H 153
Query: 56 RMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYK 115
++ P S+ N AT ++ + + A +V+E+ +N+L + L+D L
Sbjct: 154 KI---PLSV-NAAT--LLIRCFGRAQMVDESFLVYNELCPSRRLTHIRNI-LIDVLFRKG 206
Query: 116 HVIEAQELC---------FGENKNVG---FSGLVEMNKTKIYNMILRGWFKMSWWGKCRE 163
V +A L F N N G FS L + +K + R + G +
Sbjct: 207 RVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDK------VGRAVDEEEIVGLVSK 260
Query: 164 FWEEMDKRGVVKDLHSYSIYM----DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
F E ++ SI++ +C+SG+ +A + + K G M+ + N ++
Sbjct: 261 FAEH--------EVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALL 312
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM---PKK 276
A+G + + EM+EM QP+VVT +I LC+ RV EA V +M
Sbjct: 313 TALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESN 372
Query: 277 GCV--PDVITYHCFFRCLEK---PREILGLFDRM-IESGIRPKMDTYVMLLRKFGRWGFL 330
G + PDVITY+ L K E LGL +RM + P TY L+ + + +
Sbjct: 373 GFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMI 432
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
++ +M + G P+ N LVD + G ++ A ++ EM KGL
Sbjct: 433 EAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGL 482
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 108/247 (43%), Gaps = 12/247 (4%)
Query: 6 CYANDWKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C N+ ++A+E F+ +E C + Y ++I L + + D + ++ +MK+ S
Sbjct: 497 CNVNNIEKAMELFDEMLEAGC--SPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFS- 553
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ +F ++ + + ++EA +++ G+K D V+Y L+ + A L
Sbjct: 554 PDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRL 613
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRG-VVKDLHSYSI 182
K + GLV T Y ++ + + + + +M V + Y+I
Sbjct: 614 M----KKMVKEGLVPTVVT--YGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNI 667
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ +C+ + A+ L +MK KG+K + +N + + + + A + M E
Sbjct: 668 LINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHA 727
Query: 243 CQPSVVT 249
C P +T
Sbjct: 728 CNPDYIT 734
>gi|225447826|ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Vitis vinifera]
Length = 679
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 179/385 (46%), Gaps = 17/385 (4%)
Query: 4 LSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
L + + K A FF W FTH + TYN+++ +LG+ +F+ ++ M +
Sbjct: 242 LERFKHARKPAFRFFCWAGQKAGFTHNSRTYNAMMSVLGRTRQFESMMGMLGEMGEK--G 299
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQE 122
+ TF I K + A +A+G F + + V N L+D L K EAQ
Sbjct: 300 LLTMETFSIAIKAFAAAKERKKAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQA 359
Query: 123 LCFGENKNVGFSGLVE--MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
L F L + + Y ++L GW ++ + W EM +G D+ ++
Sbjct: 360 L---------FEKLEDRFTPNLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAH 410
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
++ + K K A+KL++ MK KG +V Y +IR + + A+ + EM +
Sbjct: 411 HTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMQEAVEYFDEMVD 470
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPRE 297
GCQP +I ++ + YA+L EM +KGC D TY+ + + + P +
Sbjct: 471 SGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDD 530
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ ++ +MI++GI+ + TY M+++ + VW++M GC PD+ +Y +
Sbjct: 531 AVRIYKKMIQNGIQSTLHTYNMMMKSYFYTRNYEMGCAVWEEMGRKGCCPDDNSYIVFIG 590
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSA 382
LI G + A +Y EEM KG+ A
Sbjct: 591 GLIRHGRSEEACRYLEEMIEKGMKA 615
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 124/293 (42%), Gaps = 32/293 (10%)
Query: 26 HFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNE 85
+F DT N ++D LG+ + L +++D PN T+ ++ + + E
Sbjct: 333 NFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDR--FTPNLRTYTVLLNGWCRIKNLVE 390
Query: 86 AMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL-----CFGENKNVG------- 132
A T+N++ + G K D +++ +++ L + K +A +L G + NV
Sbjct: 391 AGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIR 450
Query: 133 --------------FSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVK 175
F +V+ +Y ++ G+ K +EM ++G
Sbjct: 451 DLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPA 510
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
D +Y+ + +M P AV++YK+M + GI+ + YN ++++ + + V+
Sbjct: 511 DGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHTYNMMMKSYFYTRNYEMGCAVW 570
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
EM GC P + I L +GR EA L EM +KG + Y+ F
Sbjct: 571 EEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKF 623
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 132/296 (44%), Gaps = 25/296 (8%)
Query: 101 EVSYCNLVDALCEYKHVIEA--QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWW 158
++S+ +V L +KH + + C+ K GF+ + ++ YN + MS
Sbjct: 232 DLSHALVVGVLERFKHARKPAFRFFCWAGQK-AGFT-----HNSRTYNAM------MSVL 279
Query: 159 GKCREFWE------EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
G+ R+F EM ++G++ + ++SI + + + KAV +++ MK+ V
Sbjct: 280 GRTRQFESMMGMLGEMGEKGLLT-METFSIAIKAFAAAKERKKAVGVFELMKRYNFDAGV 338
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
N ++ +G ++ A ++ ++ + P++ T ++ C + EA E
Sbjct: 339 DTINCLLDNLGRAKLGKEAQALFEKLEDR-FTPNLRTYTVLLNGWCRIKNLVEAGRTWNE 397
Query: 273 MPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M KG PD+I +H L +K + + LF+ M G P + TY +L+R +
Sbjct: 398 MIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMK 457
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
++ + +M + GC PD Y L+ ++ +D +EM KG A R
Sbjct: 458 MQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGR 513
>gi|224107985|ref|XP_002314678.1| predicted protein [Populus trichocarpa]
gi|222863718|gb|EEF00849.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 183/371 (49%), Gaps = 12/371 (3%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A F W + + HT + Y+ +IDILGKF +F L W+L+ +MK + ++M
Sbjct: 105 AFGVFIWAKNQTSYVHTPELYDYMIDILGKFKKFSLMWSLVEQMKGLNGYVSLATASKVM 164
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
+R A +A+ F ++++G KD + L+DAL + V +A F E
Sbjct: 165 -RRLAKARKYKDAIDVFRGIEKYGASKDREALNVLMDALVKEGDVEDAHS-AFLE----- 217
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
F + ++ + +N+++ G+ K + R+ EEM+K G D+ SYS ++ C+
Sbjct: 218 FKDCITLDSSS-FNILIHGYCKARMFVVARKIMEEMEKHGFHPDVVSYSCFIAAYCEQKD 276
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
++ EM++KG K +V+ Y TV+ A+G + ++ A+ VY +M+ GC P ++
Sbjct: 277 FRNVEAVFDEMQEKGCKPNVITYTTVMHALGKARQLNEALEVYEKMKRNGCLPDSKFYSS 336
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESG 309
+I +L ++GR+++A+ V +M K+G ++ Y+ + L L +RM
Sbjct: 337 LIYVLSQSGRIKDAWDVFEDMEKQGVCRNLWVYNTMISSACAHSQGGSALKLLERMEGDS 396
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
+P + TY LL+ R ++ + + M + S D Y LV+ G L+ A
Sbjct: 397 CKPDVKTYAPLLKMCCRRKSIKLLKFLLSHMFKNNVSVDLGTYTLLVNEFCRNGKLEHAC 456
Query: 370 KYDEEMFAKGL 380
Y +E KG+
Sbjct: 457 FYFQEAVLKGM 467
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 189/385 (49%), Gaps = 14/385 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + + AL+ V+ + + YN++ID + K + +++L M S P
Sbjct: 201 CKVGETRAALDLLQRVDGNLVQPNVV-MYNTIIDSMCKVKLVNEAFDLFSEMISKGIS-P 258
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELC 124
+ T+ + + +N+A+ FNK+ +K +V N LV+A C+ + E + +
Sbjct: 259 DVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVF 318
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
K V YN ++ G+ + K + + M + GV D+ SYSI +
Sbjct: 319 DMMMKQGIKPNFVT------YNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMI 372
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ CK K +A+ L+KEM +K I DVV Y+++I + S + +A+++ +M + G
Sbjct: 373 NGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVP 432
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGL 301
P++ T N+++ LC+ +V +A A+L ++ KG P++ TY + L K + +
Sbjct: 433 PTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKV 492
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
F+ ++ G +DTY ++++ F G + KME+ GC PD Y ++ +L
Sbjct: 493 FEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFK 552
Query: 362 KGMLDMARKYDEEMFAKGLSAKPRE 386
K DMA K EM A+G+ +PR+
Sbjct: 553 KDENDMAEKLLREMIARGV--RPRQ 575
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 149/328 (45%), Gaps = 16/328 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL 123
PN I+ + L+ A F K+ + G + D +++ L+ LC K I+ L
Sbjct: 118 PNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLC-LKGQIQQAFL 176
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ +GF ++ Y ++ G K+ + + +D V ++ Y+
Sbjct: 177 FHDKVVALGF----HFDQIS-YGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTI 231
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D MCK +A L+ EM KGI DVV Y+ +I + ++ A+ ++ +M
Sbjct: 232 IDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENI 291
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPRE 297
+P V T N ++ C++G+++E V M K+G P+ +TY +C + + K +
Sbjct: 292 KPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKS 351
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
I F+ M + G+ P + +Y +++ F + ++K+M PD Y++L+D
Sbjct: 352 I---FNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLID 408
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPR 385
L G + A + ++M +G+ R
Sbjct: 409 GLSKSGRISYALQLVDQMHDRGVPPTIR 436
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 118/267 (44%), Gaps = 41/267 (15%)
Query: 133 FSGLVEMNKTKI---YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
F+ L+ N T +N IL K + ++M+ RG+ +L + +I ++ C+
Sbjct: 73 FNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQ 132
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG------- 242
G A ++ ++ K G D + + T+I+ + + + A + ++ +G
Sbjct: 133 LGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQIS 192
Query: 243 ----------------------------CQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
QP+VV NT+I +C+ V EA+ + +EM
Sbjct: 193 YGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMI 252
Query: 275 KKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
KG PDV+TY F L K + + LF++MI I+P + T+ +L+ F + G ++
Sbjct: 253 SKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMK 312
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDA 358
V+ M + G P+ YN+L+D
Sbjct: 313 EGKTVFDMMMKQGIKPNFVTYNSLMDG 339
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 93/189 (49%), Gaps = 3/189 (1%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
AV L+ + ++ +N ++ ++ S+ + + ++M G +P++V CN +I
Sbjct: 69 AVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILIN 128
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPREILGLF-DRMIESGIRP 312
C+ G + A++V A++ K G VPD IT+ + CL+ + LF D+++ G
Sbjct: 129 CFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHF 188
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
+Y L+ + G R + ++++ P+ YN ++D++ +++ A
Sbjct: 189 DQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLF 248
Query: 373 EEMFAKGLS 381
EM +KG+S
Sbjct: 249 SEMISKGIS 257
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 83/188 (44%), Gaps = 18/188 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+S+ID L K + L+ +M D P T+ + H V++A+ K
Sbjct: 402 TYSSLIDGLSKSGRISYALQLVDQMHDRGVP-PTIRTYNSILDALCKIHQVDKAIALLTK 460
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQE-----LCFGENKNVGFSGLVEMNKTKIYN 146
L + G++ + +Y L+ LC+ + +A++ L G N NV Y
Sbjct: 461 LKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNV-----------DTYT 509
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++++G+ + + +M+ G + D +Y I + + K + A KL +EM +
Sbjct: 510 IMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIAR 569
Query: 207 GIKMDVVA 214
G++ +A
Sbjct: 570 GVRPRQIA 577
>gi|224068054|ref|XP_002302657.1| predicted protein [Populus trichocarpa]
gi|222844383|gb|EEE81930.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 191/395 (48%), Gaps = 17/395 (4%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A +FF W + H + Y ++I +L K +F W L+ M+ + S + F ++
Sbjct: 98 AYKFFVWASKQPCYRHCYENYKAMIKVLSKMKQFGAVWALLEEMRRDNSVLITSEVFVVV 157
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
+R+ ++ +VN+A+ +++ ++G + DE + L+DALC+ V EA L E+ V
Sbjct: 158 MRRFASSRMVNKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLF--EDMRVR 215
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
FS K + +L GW K + + +M + G D+ Y+ + +GK
Sbjct: 216 FS-----PSLKHFTCLLYGWCKEGKLLEAKHVLVQMREAGFEPDIVVYNNLLSGYATAGK 270
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
A L KE+++KG + +Y +I+A+ E +D AMRV+ EM GC VVT
Sbjct: 271 MGDAFDLLKEIRRKGCDPNATSYTILIQALCGQEKMDEAMRVFVEMERSGCDADVVTYTA 330
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMI 306
++ C+ + + Y +L M +KG +P+ +TY H LE+ +E++G M
Sbjct: 331 LVSGFCKWRMIDKGYQILQSMIQKGHMPNQLTYLHLMLAHEKKEELEECKELMG---EMQ 387
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
+ G P + Y +++R + G + W +ME G SP + +++ + G L
Sbjct: 388 KIGCIPDLSIYNVVIRLACKLGEVNAGVDAWNEMEVSGLSPGLDTFVIMINGFLGHGYLV 447
Query: 367 MARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
A +Y +EM +GL + + + L+ L GE+
Sbjct: 448 EACQYFKEMVERGLLSSRQYGILKDLLNALLRGEK 482
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 116/288 (40%), Gaps = 50/288 (17%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
PN ++ I+ + ++EAM F +++ G D V+Y LV C+++ + + ++
Sbjct: 288 PNATSYTILIQALCGQEKMDEAMRVFVEMERSGCDADVVTYTALVSGFCKWRMIDKGYQI 347
Query: 124 C----------------------------------FGENKNVGFSGLVEMNKTKIYNMIL 149
GE + +G + IYN+++
Sbjct: 348 LQSMIQKGHMPNQLTYLHLMLAHEKKEELEECKELMGEMQKIGC-----IPDLSIYNVVI 402
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
R K+ + W EM+ G+ L ++ I ++ G +A + +KEM ++G+
Sbjct: 403 RLACKLGEVNAGVDAWNEMEVSGLSPGLDTFVIMINGFLGHGYLVEACQYFKEMVERGL- 461
Query: 210 MDVVAYNTV---IRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
+ Y + + A+ E ++ A ++ + GC+ +V + I L NG V+EA
Sbjct: 462 LSSRQYGILKDLLNALLRGEKLELAKDLWSCIVTKGCELNVDSWTIWIHALFSNGHVKEA 521
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKM 314
+ +M +P T+ R L K L++R + I K+
Sbjct: 522 CSYCLDMMDADLMPKPETFAKLMRGLRK------LYNRQFAAEITEKV 563
>gi|357156708|ref|XP_003577549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Brachypodium distachyon]
Length = 522
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 182/367 (49%), Gaps = 26/367 (7%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
D Y++V+D LG+ +FD +W L+ + ++ TF ++ +RYV A + +A+ F
Sbjct: 114 ADAYDAVVDALGRAHQFDAAWRLVVEAAADGAATSR--TFAVLARRYVAAGMTRQAVRAF 171
Query: 91 NKLDEFGLK--DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
+ ++ F + D + L+D LC+YK+ A E+ F + K E N+ K+Y ++
Sbjct: 172 DDMEAFVGREPDAGEFTTLLDTLCKYKYPKVATEV-FNKRKYK-----YEPNE-KMYTIL 224
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK----------AVK 198
+ GW K++ ++F ++M G+ ++ +Y+I ++ +C+ A
Sbjct: 225 IYGWCKVNRNDMSQKFLKDMIDHGIEPNVVTYNILLNGVCRHASLHPDNRFDRTVRAAED 284
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
L KEM+ +GI+ DV +Y+ V+ + + + ++R M++ G P+V T +VIK L
Sbjct: 285 LLKEMRDRGIEPDVTSYSIVLHVYSRAHKAELCLCMFRSMKDRGICPTVATYTSVIKCLA 344
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRM--IESGIRPK 313
GR+ +A +L EM +G P TY+CFF+ ++++G L+ +M S P
Sbjct: 345 SCGRLEDAERLLHEMASEGVCPSPATYNCFFKEYRGRKDVIGALELYKKMKAPASPTAPD 404
Query: 314 MDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDE 373
+ +Y +LL F + V +W M E PD +Y L+ + A ++
Sbjct: 405 IHSYHILLGMFVKLNQHGTVTELWNDMCESTVGPDLDSYTLLIHGFCENEKWREACQFFM 464
Query: 374 EMFAKGL 380
EM KG
Sbjct: 465 EMIEKGF 471
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 100/257 (38%), Gaps = 18/257 (7%)
Query: 48 DLSWNLIHRMKDNPSSIPNHATFRIMFK---RYVTAH-------LVNEAMGTFNKLDEFG 97
D+S + M D+ PN T+ I+ R+ + H V A ++ + G
Sbjct: 235 DMSQKFLKDMIDHGIE-PNVVTYNILLNGVCRHASLHPDNRFDRTVRAAEDLLKEMRDRG 293
Query: 98 LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSW 157
++ +V+ ++V + H ELC +++ G+ T Y +++
Sbjct: 294 IEPDVTSYSIVLHVYSRAH---KAELCLCMFRSMKDRGICPTVAT--YTSVIKCLASCGR 348
Query: 158 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG--IKMDVVAY 215
EM GV +Y+ + A++LYK+MK D+ +Y
Sbjct: 349 LEDAERLLHEMASEGVCPSPATYNCFFKEYRGRKDVIGALELYKKMKAPASPTAPDIHSY 408
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
+ ++ ++ +M E P + + +I CEN + REA EM +
Sbjct: 409 HILLGMFVKLNQHGTVTELWNDMCESTVGPDLDSYTLLIHGFCENEKWREACQFFMEMIE 468
Query: 276 KGCVPDVITYHCFFRCL 292
KG +P IT+ +R L
Sbjct: 469 KGFLPQKITFEILYRGL 485
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 76/193 (39%), Gaps = 39/193 (20%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TY SVI L + + L+H M P+ AT+ FK Y
Sbjct: 332 TVATYTSVIKCLASCGRLEDAERLLHEMASE-GVCPSPATYNCFFKEYR----------- 379
Query: 90 FNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
G KD VI A EL + + K +++ Y+++L
Sbjct: 380 -------GRKD----------------VIGALEL-YKKMKAPASPTAPDIHS---YHILL 412
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
+ K++ G E W +M + V DL SY++ + C++ K +A + + EM +KG
Sbjct: 413 GMFVKLNQHGTVTELWNDMCESTVGPDLDSYTLLIHGFCENEKWREACQFFMEMIEKGFL 472
Query: 210 MDVVAYNTVIRAV 222
+ + + R +
Sbjct: 473 PQKITFEILYRGL 485
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 178/370 (48%), Gaps = 13/370 (3%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T T+ ++I+ LGK +F + L M P+ T+ + A G
Sbjct: 44 TIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQ-PDDYTYTTIINGLCKIGETALAAGL 102
Query: 90 FNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
F K++E G + + V+Y L+ +LC+Y+ V EA ++ F K S + Y +
Sbjct: 103 FKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDI-FSYMKAKDISPTI-----FTYTSL 156
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
++G S W + EM ++ ++ ++++ +D CK GK A + K M + G+
Sbjct: 157 IQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGV 216
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ DVV YN+++ + V A +++ M GC+P V + + +I C+ R+ EA
Sbjct: 217 EPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQ 276
Query: 269 VLAEMPKKGCVPDVITYHCFFR--C-LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ EM +G P+ ++Y+ C L + RE LF M +G P + TY +LL F
Sbjct: 277 LFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFC 336
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
+ G+L F +++ M+ P+ YN LV+A+ G L AR+ E+F GL +P
Sbjct: 337 KQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGL--QPN 394
Query: 386 EELGTKLVQG 395
++ T ++ G
Sbjct: 395 VQIYTTIING 404
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 141/281 (50%), Gaps = 11/281 (3%)
Query: 124 CFGENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
C + ++GFS L + K + + ++ G K+ + + E +++M RG D
Sbjct: 21 CQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDD 80
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
++Y+ ++ +CK G+ A L+K+M++ G +++VV Y+T+I ++ V+ A+ ++
Sbjct: 81 YTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSY 140
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
M+ P++ T ++I+ LC R +EA A+L EM +P+V+T++ K +
Sbjct: 141 MKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGK 200
Query: 298 IL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
+L G+ M E G+ P + TY L+ + W + ++ M GC PD F+Y+
Sbjct: 201 VLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSI 260
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
L++ +D A++ EM +G + P L+ G
Sbjct: 261 LINGYCKAKRIDEAKQLFNEMIHQG--STPNNVSYNTLIHG 299
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 135/289 (46%), Gaps = 15/289 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + WK A N + T + T+N ++D K + + ++ M + P
Sbjct: 161 CNFSRWKEASALLNEM-TSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVE-P 218
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELC 124
+ T+ + Y V EA F+ + G K +V SY L++ C+ K + EA++L
Sbjct: 219 DVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQL- 277
Query: 125 FGENKNVGFSGLVEMNKTK---IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
F+ ++ T YN ++ G ++ + ++ ++ M G + +L++Y+
Sbjct: 278 --------FNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYA 329
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
I +D CK G KA +L++ M+ +K ++V YN ++ A+ S + A ++ E+ +
Sbjct: 330 ILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVI 389
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR 290
G QP+V T+I LC+ G + EA M GC PD +Y+ R
Sbjct: 390 GLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIR 438
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 107/221 (48%), Gaps = 7/221 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL 123
P+ ++ I+ Y A ++EA FN++ G + VSY L+ LC+ + EAQ+L
Sbjct: 253 PDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDL 312
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
KN+ +G + Y ++L G+ K + GK + M + +L Y+I
Sbjct: 313 F----KNMHTNG--NLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNIL 366
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
++ MCKSG A +L+ E+ G++ +V Y T+I + +D A+ +R M + GC
Sbjct: 367 VNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGC 426
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
P + N +I+ ++ A ++ EM +G + D T
Sbjct: 427 PPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 3/162 (1%)
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M+ G+ + N +I + VD V + ++G QP++VT T+I L + G+
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVM 319
+A + +M +GC PD TY L K E GLF +M E+G + + TY
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
L+ ++ + ++ M+ SP F Y +L+ L +
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCN 162
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 154/300 (51%), Gaps = 10/300 (3%)
Query: 86 AMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI 144
A G F K+ E G + D V+Y ++D+LC+ + V EA ++ F K G S
Sbjct: 29 AAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDI-FSYMKAKGISP-----NIFT 82
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN +++G S W + EM ++ ++ ++S+ ++I CK G ++A + K M
Sbjct: 83 YNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMT 142
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+ G++ +VV Y++++ + V A +++ M GC+P V + N +I C+ R+
Sbjct: 143 EMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIG 202
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFR--C-LEKPREILGLFDRMIESGIRPKMDTYVMLL 321
EA + EM +G PD+++Y+ C L + RE LF M+ +G P + TY +LL
Sbjct: 203 EAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILL 262
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
F + G+L F +++ M+ P+ YN L+DA+ L ARK E+F +GL
Sbjct: 263 DGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQ 322
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 111/217 (51%), Gaps = 3/217 (1%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M RG D+H+Y+ ++ +CK G+ A L+K+M + G + DVV Y+T+I ++
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
V+ A+ ++ M+ G P++ T N++I+ LC R REA A+L EM +P+++T+
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120
Query: 288 FFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
K + G+ M E G+ P + TY L+ + + ++ M G
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
C PD F+YN L++ + A++ EM +GL+
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLT 217
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 113/238 (47%), Gaps = 3/238 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y I+ G K+ +++M + G D+ +YS +D +CK + +A+ ++ MK
Sbjct: 13 YTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMK 72
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
KGI ++ YN++I+ + A + EM + P++VT + +I + C+ G V
Sbjct: 73 AKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVF 132
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLL 321
EA VL M + G P+V+TY E+ LFD MI G +P + +Y +L+
Sbjct: 133 EARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILI 192
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ + + ++ +M G +PD +YN L+D L G L A + M G
Sbjct: 193 NGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNG 250
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 137/273 (50%), Gaps = 15/273 (5%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
AL+ F++++ + TYNS+I L F + + +++ M + + +PN TF ++
Sbjct: 64 ALDIFSYMKAK-GISPNIFTYNSLIQGLCNFSRWREASAMLNEMM-SLNIMPNIVTFSLL 121
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
+ V EA G + E G++ + V+Y +L++ V EA++L
Sbjct: 122 INIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKL--------- 172
Query: 133 FSGLVEMN-KTKI--YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
F ++ K + YN+++ G+ K G+ ++ + EM +G+ D+ SY+ +D +C+
Sbjct: 173 FDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQ 232
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
G+ +A L+K M G D+ Y+ ++ + A R++R M+ +P++V
Sbjct: 233 LGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVM 292
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
N +I +C++ ++EA + +E+ +G P++
Sbjct: 293 YNILIDAMCKSRNLKEARKLFSELFVQGLQPNM 325
>gi|356561933|ref|XP_003549231.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g62470, mitochondrial-like [Glycine max]
Length = 510
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 182/385 (47%), Gaps = 13/385 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+ L + + K A FF F H + TYN ++ +LG+ +F+ + M +
Sbjct: 71 DVLQRFKHARKPAFRFFCXAGKRPGFAHDSRTYNFMMCVLGRTRQFETMVAKLEEMGEK- 129
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
+ TF I K + A + +G F+ + ++G K V N L+D+L K EA
Sbjct: 130 -GLLTMETFSIAIKAFAEAKQRKKEVGIFDLMKKYGFKVGVDVINFLLDSLSTAKLGKEA 188
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
Q + F + K+ L + Y ++L GW ++ + W EM RG D+ ++
Sbjct: 189 QAV-FEKLKDRFTPSL------QTYTILLSGWCRLKNLLEAGRVWNEMIDRGFNPDIVAH 241
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
++ ++ + K K A+KL++ MK KG +V +Y +I+ + + A+ + M +
Sbjct: 242 NVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGEAIEYFDVMVD 301
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PRE 297
GCQP +I ++ Y++L EM ++GC PD TY+ + + P +
Sbjct: 302 RGCQPDAALYTCLITGFGRQKKMDMVYSLLKEMRERGCPPDGRTYNALIKLMTSQHMPDD 361
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ ++ +MI+SGI+P + TY M+++ + +W +M GC PD+ +Y +
Sbjct: 362 AVRIYKKMIQSGIKPTIHTYNMIMKSYFVTKNYEMGHEIWDEMHPKGCCPDDNSYIVYIG 421
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSA 382
LI + A KY EEM KG+ A
Sbjct: 422 GLIRQDRSGEACKYLEEMLEKGMKA 446
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 111/270 (41%), Gaps = 20/270 (7%)
Query: 26 HFTHTTDTYNSVID---ILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHL 82
FT + TY ++ L E WN + NP + ++ +M + +
Sbjct: 198 RFTPSLQTYTILLSGWCRLKNLLEAGRVWNEMIDRGFNPDIVAHN----VMLEGLLKCKK 253
Query: 83 VNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVE--- 138
++A+ F + G V SY ++ C+ K + EA E F +V+
Sbjct: 254 KSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGEAIEY---------FDVMVDRGC 304
Query: 139 MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK 198
+Y ++ G+ + +EM +RG D +Y+ + +M P AV+
Sbjct: 305 QPDAALYTCLITGFGRQKKMDMVYSLLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVR 364
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
+YK+M + GIK + YN ++++ V++ + ++ EM GC P + I L
Sbjct: 365 IYKKMIQSGIKPTIHTYNMIMKSYFVTKNYEMGHEIWDEMHPKGCCPDDNSYIVYIGGLI 424
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
R EA L EM +KG + Y+ F
Sbjct: 425 RQDRSGEACKYLEEMLEKGMKALKLDYNKF 454
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 92/229 (40%), Gaps = 42/229 (18%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A+E+F+ V D Y +I G+ + D+ ++L+ M++ P+ T+ +
Sbjct: 292 AIEYFD-VMVDRGCQPDAALYTCLITGFGRQKKMDMVYSLLKEMRERGCP-PDGRTYNAL 349
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGF 133
K + H+ ++A+ + K+ + G+K +
Sbjct: 350 IKLMTSQHMPDDAVRIYKKMIQSGIKPTIH------------------------------ 379
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
YNMI++ +F + E W+EM +G D +SY +Y+ + + +
Sbjct: 380 ----------TYNMIMKSYFVTKNYEMGHEIWDEMHPKGCCPDDNSYIVYIGGLIRQDRS 429
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+A K +EM +KG+K + YN + + + R+M +G
Sbjct: 430 GEACKYLEEMLEKGMKALKLDYNKFASDISKTGNAVILEELARKMNFVG 478
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 5/185 (2%)
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
K+ G D YN ++ +G + + + EM E G ++ T + IK E +
Sbjct: 92 KRPGFAHDSRTYNFMMCVLGRTRQFETMVAKLEEMGEKGLL-TMETFSIAIKAFAEAKQR 150
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVML 320
++ + M K G V + L + E +F+++ + P + TY +L
Sbjct: 151 KKEVGIFDLMKKYGFKVGVDVINFLLDSLSTAKLGKEAQAVFEKL-KDRFTPSLQTYTIL 209
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
L + R L VW +M + G +PD A+N +++ L+ A K E M AKG
Sbjct: 210 LSGWCRLKNLLEAGRVWNEMIDRGFNPDIVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGP 269
Query: 381 SAKPR 385
S R
Sbjct: 270 SPNVR 274
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 178/370 (48%), Gaps = 13/370 (3%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T T+ ++I+ L K EF + L M P+ T+ + A G
Sbjct: 162 TIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQ-PDVYTYNTIINGLCKIGETAAAAGL 220
Query: 90 FNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
K++E G + + V+Y L+D+LC + V EA ++ F K G S + Y +
Sbjct: 221 LKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDI-FSYMKAKGISPDIF-----TYTSL 274
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
++G K S W + EM ++ D+ ++++ +D CK GK +A+ + K M + G+
Sbjct: 275 IQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGV 334
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ +VV Y++++ + V A +++ M GC+P++ + N +I C+ R+ EA
Sbjct: 335 EPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQ 394
Query: 269 VLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ EM +G P+ ++Y+ F L K RE LF M +G P + TY +LL F
Sbjct: 395 LFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFC 454
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
+ G+L F +++ M+ P+ Y LV A+ G ARK E+F +GL +P
Sbjct: 455 KQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGL--QPH 512
Query: 386 EELGTKLVQG 395
+L T ++ G
Sbjct: 513 VQLYTTIING 522
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 185/430 (43%), Gaps = 50/430 (11%)
Query: 6 CYANDWKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C ++ +A+E F+ V C TYN++I+ L K E + L+ +M++
Sbjct: 174 CKVGEFAQAVELFDDMVAKGCQ--PDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQ- 230
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
PN T+ + LVNEA+ F+ + G+ ++ +Y +L+ LC++ EA L
Sbjct: 231 PNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASAL 290
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
E + L M +N+++ + K + + M + GV ++ +YS
Sbjct: 291 -LNE-----MTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSL 344
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
M +A KL+ M KG K ++ +YN +I ++ +D AM+++ EM G
Sbjct: 345 MYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGL 404
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF--------------- 288
P+ V+ NT+I C+ G++REA + M G +PD+ TY
Sbjct: 405 TPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFR 464
Query: 289 -FRCLE----KPREIL------------------GLFDRMIESGIRPKMDTYVMLLRKFG 325
FR ++ KP ++ LF + G++P + Y ++
Sbjct: 465 LFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLC 524
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
+ G L ++ ME GC PDE +YN ++ L+ A EM +G A R
Sbjct: 525 KEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADVR 584
Query: 386 EELGTKLVQG 395
L +++ QG
Sbjct: 585 PCL-SEVCQG 593
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 143/281 (50%), Gaps = 11/281 (3%)
Query: 124 CFGENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
C + ++GFS L ++ K + + ++ G K+ + + E +++M +G D+
Sbjct: 139 CQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDV 198
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
++Y+ ++ +CK G+ A L K+M++ G + ++V Y+T+I ++ V+ A+ ++
Sbjct: 199 YTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSY 258
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-K 294
M+ G P + T ++I+ LC+ R +EA A+L EM +PD++T++ C E K
Sbjct: 259 MKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGK 318
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
E LG+ M E G+ P + TY L+ + W + ++ M GC P+ F+YN
Sbjct: 319 VSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNI 378
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
L++ +D A + EM +GL+ P L+ G
Sbjct: 379 LINGYCKAKRIDEAMQLFNEMIHQGLT--PNNVSYNTLIHG 417
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 4/199 (2%)
Query: 165 WEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAV-KLYKEMKKKGIKMDVVAYNTVIRAVG 223
+ M R + + ++ + + K G+ + V L K+M+ G+ ++ + +
Sbjct: 80 FNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFC 139
Query: 224 VSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVI 283
+ VD V ++ ++G QP++VT T+I LC+ G +A + +M KGC PDV
Sbjct: 140 QLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVY 199
Query: 284 TYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
TY+ L K E GL +M E+G +P M TY L+ R + ++ M
Sbjct: 200 TYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYM 259
Query: 341 EELGCSPDEFAYNALVDAL 359
+ G SPD F Y +L+ L
Sbjct: 260 KAKGISPDIFTYTSLIQGL 278
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 5/170 (2%)
Query: 229 DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
D + + ++M +G P++ T + + C+ RV ++VLA++ K G P ++T+
Sbjct: 110 DVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTL 169
Query: 289 FRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
L K E + LFD M+ G +P + TY ++ + G + KKMEE GC
Sbjct: 170 INGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGC 229
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
P+ Y+ L+D+L +++ A M AKG+S P T L+QG
Sbjct: 230 QPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGIS--PDIFTYTSLIQG 277
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 190/386 (49%), Gaps = 15/386 (3%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
++ +FN + D F ++ +N ++ + F+ W+ + K + + +F I+
Sbjct: 113 SISYFNEM-VDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKV--VLDVYSFGIL 169
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNVG 132
K A + ++ +L EFG V Y L+D C+ + +A++L F +G
Sbjct: 170 IKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFF----EMG 225
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
GLV +T Y +++ G FK + E +E+M + GV +L++Y+ M+ +CK G+
Sbjct: 226 KLGLVANERT--YTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGR 283
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
A +++ EM+++G+ ++V YNT+I + ++ A +V +M+ G P+++T NT
Sbjct: 284 TKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNT 343
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESG 309
+I C G++ +A ++ ++ +G P ++TY+ + + G + M E G
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
I+P TY +L+ F R + + MEELG PD Y+ L+ KG ++ A
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS 463
Query: 370 KYDEEMFAKGLSAKPREELGTKLVQG 395
+ + M K + +P E + ++ G
Sbjct: 464 RLFKSMVEK--NCEPNEVIYNTMILG 487
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 148/315 (46%), Gaps = 12/315 (3%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
K+ E + ++ D F + TYN V++ L K ++ + M++ S N T+
Sbjct: 250 KQGFEMYEKMQEDGVFPNLY-TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSC-NIVTYN 307
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKN 130
+ +NEA +++ G+ + ++Y L+D C + +A LC ++
Sbjct: 308 TLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLC----RD 363
Query: 131 VGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS 190
+ GL T YN+++ G+ + + +EM++RG+ +Y+I +D +S
Sbjct: 364 LKSRGLSPSLVT--YNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARS 421
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTC 250
KA++L M++ G+ DV Y+ +I + ++ A R+++ M E C+P+ V
Sbjct: 422 DNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIY 481
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIE 307
NT+I C+ G A +L EM +K P+V +Y L K +E L ++MI+
Sbjct: 482 NTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMID 541
Query: 308 SGIRPKMDTYVMLLR 322
SGI P ++ R
Sbjct: 542 SGIDPSTSILSLISR 556
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
P+ T+ I+ + + + +A+ ++E GL +V +Y L+ C + EA L
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 124 CFGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
F +VE N IYN ++ G+ K + + +EM+++ + ++ SY
Sbjct: 466 ---------FKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASY 516
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
++++CK K +A +L ++M GI + + RA
Sbjct: 517 RYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557
>gi|242087579|ref|XP_002439622.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
gi|241944907|gb|EES18052.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
Length = 657
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 176/377 (46%), Gaps = 16/377 (4%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
+ + FF W FTHTT TY ++ ILGK +F++ +I M + F+
Sbjct: 211 RPSYRFFRWATASGGFTHTTITYCKMLHILGKTRQFEMMVAIIQEMGK--VGALSMDAFK 268
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKN 130
+ K + A + A+G F + + G D V S+ L+ AL EA+++ F +
Sbjct: 269 VAIKSFAAAGEIKNAVGVFELMKKNGFDDGVESFNCLLVALANEGLGREARQV-FDKMHG 327
Query: 131 VGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS 190
L + Y ++ W + W EM ++G+ D+ ++ ++ + +
Sbjct: 328 QYSPDL------RSYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRG 381
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTC 250
+ +A+K+++ MK KG +V Y +IR +D AM + EM+E CQP V T
Sbjct: 382 QRRPEALKMFELMKAKGPPPNVWTYTMLIRDHCKRGKMDMAMECFEEMQEARCQPDVATY 441
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIE 307
++ R+ AVL EM +KGC PD TY+ + L P + ++ +MI+
Sbjct: 442 TCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMIK 501
Query: 308 SGIRPKMDTYVMLLRKF--GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
G+ P + TY M+++ + G + VW++M G PD +Y ++ I G
Sbjct: 502 KGLEPTIHTYNMMMKSYFLGDRNYAMGC-AVWEEMHRRGICPDVNSYTVFINGHIRHGRP 560
Query: 366 DMARKYDEEMFAKGLSA 382
+ A KY EEM KG++A
Sbjct: 561 EEAYKYIEEMINKGMTA 577
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 10/227 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
P+ M + + EA+ F + G V +Y L+ C+ + A E
Sbjct: 366 PDVVVHNTMIEGLLRGQRRPEALKMFELMKAKGPPPNVWTYTMLIRDHCKRGKMDMAME- 424
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
CF E + V Y +L G+ + EEM ++G D +Y+
Sbjct: 425 CFEEMQEARCQPDV-----ATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNAL 479
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM--RVYREMREM 241
+ ++ P A ++YK+M KKG++ + YN ++++ + + ++AM V+ EM
Sbjct: 480 IKLLTNRKMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGD-RNYAMGCAVWEEMHRR 538
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
G P V + I +GR EAY + EM KG I Y+ F
Sbjct: 539 GICPDVNSYTVFINGHIRHGRPEEAYKYIEEMINKGMTAPQIDYNKF 585
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 180/394 (45%), Gaps = 14/394 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C K+A EF ++E F +YN++I + + ++ M+ P
Sbjct: 260 CKEGKLKKAREFIGFME-GLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIE-P 317
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ + + EA G F+K+ E GL + V+Y L+D C + E
Sbjct: 318 DSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL----ERA 373
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F + G+ M YN+++ F G+ + +EM K+G++ D +Y+I +
Sbjct: 374 FSYRDEMVKKGI--MPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILI 431
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ + G KA L+ EM KGI+ V Y ++I + + A ++ ++ + G
Sbjct: 432 NGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVS 491
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF--RCLE-KPREILGL 301
P V+ N ++ C NG V A+ +L EM +K PD +T++ RC E K E L
Sbjct: 492 PDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARML 551
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
D M GI+P +Y L+ +GR G ++ F V +M +G +P YNAL+ L
Sbjct: 552 LDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCK 611
Query: 362 KGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
D+A + +EM KG+S P + L++G
Sbjct: 612 NQEGDLAEELLKEMVNKGIS--PDDSTYLSLIEG 643
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 143/315 (45%), Gaps = 21/315 (6%)
Query: 81 HLVNEAMGT--------FNKL----DEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGEN 128
L+ + MGT F++L D +K + + LV CE + EA + CF
Sbjct: 147 QLLKQVMGTRIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFK-CFYMM 205
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
K G +E + + +M+W + EM + + +++++I ++++C
Sbjct: 206 KEKGIVPKIETCNDMLSLFLKLNRMEMAWV-----LYAEMFRLRISSTVYTFNIMVNVLC 260
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
K GK KA + M+ G K +VV+YNT+I ++ A R+ MR G +P
Sbjct: 261 KEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSY 320
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLF---DRM 305
T ++I +C+ GR+ EA + +M + G VP+ +TY+ ++ F D M
Sbjct: 321 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 380
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
++ GI P + TY +L+ G + + K+M + G PD YN L++ G
Sbjct: 381 VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNA 440
Query: 366 DMARKYDEEMFAKGL 380
A EM +KG+
Sbjct: 441 KKAFDLHNEMLSKGI 455
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 23/222 (10%)
Query: 10 DWKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
+ K+A + N + TH T Y S+I +L + + +L ++ D S P+
Sbjct: 439 NAKKAFDLHNEMLSKGIEPTHVT--YTSLIYVLSRRNRMKEADDLFEKILDQGVS-PDVI 495
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE 127
F M + V A ++D + DEV++ L+ C V EA+ L
Sbjct: 496 MFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARML---- 551
Query: 128 NKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
L EM + I YN ++ G+ + +EM G L +Y+
Sbjct: 552 --------LDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYN 603
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
+ +CK+ + A +L KEM KGI D Y ++I +G
Sbjct: 604 ALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMG 645
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 180/394 (45%), Gaps = 14/394 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C K+A EF ++E F +YN++I + + ++ M+ P
Sbjct: 238 CKEGKLKKAREFIGFME-GLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIE-P 295
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ + + EA G F+K+ E GL + V+Y L+D C + E
Sbjct: 296 DSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL----ERA 351
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F + G+ M YN+++ F G+ + +EM K+G++ D +Y+I +
Sbjct: 352 FSYRDEMVKKGI--MPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILI 409
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ + G KA L+ EM KGI+ V Y ++I + + A ++ ++ + G
Sbjct: 410 NGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVS 469
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF--RCLE-KPREILGL 301
P V+ N ++ C NG V A+ +L EM +K PD +T++ RC E K E L
Sbjct: 470 PDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARML 529
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
D M GI+P +Y L+ +GR G ++ F V +M +G +P YNAL+ L
Sbjct: 530 LDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCK 589
Query: 362 KGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
D+A + +EM KG+S P + L++G
Sbjct: 590 NQEGDLAEELLKEMVNKGIS--PDDSTYLSLIEG 621
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 143/315 (45%), Gaps = 21/315 (6%)
Query: 81 HLVNEAMGT--------FNKL----DEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGEN 128
L+ + MGT F++L D +K + + LV CE + EA + CF
Sbjct: 125 QLLKQVMGTRIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFK-CFYMM 183
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
K G +E + + +M+W + EM + + +++++I ++++C
Sbjct: 184 KEKGIVPKIETCNDMLSLFLKLNRMEMAWV-----LYAEMFRLRISSTVYTFNIMVNVLC 238
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
K GK KA + M+ G K +VV+YNT+I ++ A R+ MR G +P
Sbjct: 239 KEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSY 298
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLF---DRM 305
T ++I +C+ GR+ EA + +M + G VP+ +TY+ ++ F D M
Sbjct: 299 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 358
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
++ GI P + TY +L+ G + + K+M + G PD YN L++ G
Sbjct: 359 VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNA 418
Query: 366 DMARKYDEEMFAKGL 380
A EM +KG+
Sbjct: 419 KKAFDLHNEMLSKGI 433
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 23/222 (10%)
Query: 10 DWKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
+ K+A + N + TH T Y S+I +L + + +L ++ D S P+
Sbjct: 417 NAKKAFDLHNEMLSKGIEPTHVT--YTSLIYVLSRRNRMKEADDLFEKILDQGVS-PDVI 473
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE 127
F M + V A ++D + DEV++ L+ C V EA+ L
Sbjct: 474 MFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARML---- 529
Query: 128 NKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
L EM + I YN ++ G+ + +EM G L +Y+
Sbjct: 530 --------LDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYN 581
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
+ +CK+ + A +L KEM KGI D Y ++I +G
Sbjct: 582 ALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMG 623
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 186/389 (47%), Gaps = 25/389 (6%)
Query: 27 FTHTTDTYNSVIDIL-----GKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAH 81
F T +YN+V+D L ++D + + M N S PN T+ ++ + V+
Sbjct: 163 FAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVS-PNVYTYNVIIRGVVSQG 221
Query: 82 LVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN 140
+ + +G K+++ G+ + V+Y L+DA C+ K V EA L + L+
Sbjct: 222 DLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLIS-- 279
Query: 141 KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
YN ++ G + E EEM +G+V D +Y+ ++ CK G + + L
Sbjct: 280 ----YNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLL 335
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
EM KG+ +VV Y T+I + + + A+ ++ +MR G +P+ T T+I C+
Sbjct: 336 SEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQK 395
Query: 261 GRVREAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPKM 314
G + EAY VL+EM G P V+TY +CF L + +E +G+ M+E G+ P +
Sbjct: 396 GLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCF---LGRVQEAVGILRGMVERGLPPDV 452
Query: 315 DTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
+Y ++ F R L F + ++M E G PD Y++L+ L + L A E
Sbjct: 453 VSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFRE 512
Query: 375 MFAKGLSAKPREELGTKLVQG-GLDGEQS 402
M +GL P E T L+ +DGE S
Sbjct: 513 MMRRGL--PPDEVTYTSLINAYCVDGELS 539
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 156/356 (43%), Gaps = 32/356 (8%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY ++I+ + K + + +M+ PN T+ + + L+NEA ++
Sbjct: 349 TYTTLINCMCKAGNLSRAVEIFDQMRVRGLR-PNERTYTTLIDGFCQKGLMNEAYKVLSE 407
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIYNMI 148
+ G V +Y LV C V EA + G+VE Y+ +
Sbjct: 408 MIVSGFSPSVVTYNALVHGYCFLGRVQEAVGI---------LRGMVERGLPPDVVSYSTV 458
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G+ + GK + EEM ++GV+ D +YS + +C K +A L++EM ++G+
Sbjct: 459 IAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGL 518
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
D V Y ++I A V + A+R++ EM + G P VT + +I L + R + A
Sbjct: 519 PPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKR 578
Query: 269 VLAEMPKKGCVPDVITYHCF--------FRCLEKP----------REILGLFDRMIESGI 310
+L ++ + VPD +TY+ F+ +E E +F M++
Sbjct: 579 LLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNH 638
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
+P Y +++ R G + + ++ ++E + A ALV AL +GM D
Sbjct: 639 KPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMND 694
>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 654
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 189/392 (48%), Gaps = 11/392 (2%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A F++W D Y ++I +L + +F W LI M+ + F I+
Sbjct: 139 AYRFYSWASKQSGHRLDHDAYKAMIKVLSRMRQFGAVWALIEEMRQENPHLITPQVFVIL 198
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
+R+ +A +V++A+ +++ ++G + DE + L+DALC+ V EA L E+
Sbjct: 199 MRRFASARMVHKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLF--EDMRYR 256
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
+ V K + +L GW K + + +M G+ D+ Y+ + ++GK
Sbjct: 257 WKPSV-----KHFTSLLYGWCKEGKLMEAKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGK 311
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
A L KEM++K + + +Y +I+++ E ++ A R++ EM+ GCQ VVT +T
Sbjct: 312 MGDAYDLLKEMRRKRCEPNATSYTVLIQSLCKHERLEEATRLFVEMQTNGCQADVVTYST 371
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC---LEKPREILGLFDRMIESG 309
+I C+ G+++ Y +L EM ++G P+ + Y E+ E L + M + G
Sbjct: 372 LISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMLAHEKKEELEECKELVNEMQKIG 431
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
P + Y ++R + G ++ +W +ME G SP + +++ +++G L A
Sbjct: 432 CAPDLSIYNTVIRLACKLGEVKEGIQLWNEMESSGLSPGMDTFVIMINGFLEQGCLVEAC 491
Query: 370 KYDEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
+Y +EM +GL P+ +L+ L E+
Sbjct: 492 EYFKEMVGRGLFTAPQYGTLKELMNSLLRAEK 523
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 124/321 (38%), Gaps = 52/321 (16%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
YN+++ + + +++L+ M+ PN ++ ++ + + EA F +
Sbjct: 298 VYNNLLGGYAQAGKMGDAYDLLKEMRRKRCE-PNATSYTVLIQSLCKHERLEEATRLFVE 356
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G + D V+Y L+ C++ + EL + F V IY I+
Sbjct: 357 MQTNGCQADVVTYSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQV------IYQHIMLA 410
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK-- 209
K +C+E EM K G DL Y+ + + CK G+ + ++L+ EM+ G+
Sbjct: 411 HEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEVKEGIQLWNEMESSGLSPG 470
Query: 210 MD--VVAYNTVIRAVGVSEGVD----------FAMRVYREMREM---------------- 241
MD V+ N + + E + F Y ++E+
Sbjct: 471 MDTFVIMINGFLEQGCLVEACEYFKEMVGRGLFTAPQYGTLKELMNSLLRAEKLEMAKDA 530
Query: 242 --------GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE 293
GCQ +V I L G V+EA + +M K +P+ T+ L+
Sbjct: 531 WNCITASKGCQLNVSAWTIWIHALFSKGHVKEACSFCIDMMDKDLMPNPDTFAKLMHGLK 590
Query: 294 KPREILGLFDRMIESGIRPKM 314
K L++R + I K+
Sbjct: 591 K------LYNRQFAAEITEKV 605
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 175/404 (43%), Gaps = 69/404 (17%)
Query: 15 LEFFNWVET----DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
++ FN + DC +H T +N +ID+ K + DL++ L M D +P+ T+
Sbjct: 358 IDAFNLAQMMLRRDCKPSHFT--FNLMIDMFCKVGQLDLAYELFQLMTDR-GCLPDIYTY 414
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE------- 122
IM A+ +++A ++ E G D V+Y ++V LC+ V EA E
Sbjct: 415 NIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRN 474
Query: 123 ----------------LCFGENKNVGFSGLVEMNKTK------IYNMILRGWFKMSWWGK 160
LC + L EM + Y +++ G+ K K
Sbjct: 475 GGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDK 534
Query: 161 CREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIR 220
F+ EM +G V + +YSI +D +CKS + L K M ++G+ D + Y +VI
Sbjct: 535 SLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVID 594
Query: 221 AVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVP 280
+ S+ D A +Y+ M++ GC P+VVT N ++ LC+ R+ EA +L M GC+P
Sbjct: 595 GLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLP 654
Query: 281 DVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
D +TY+ +FD +S K F +++ M
Sbjct: 655 DTVTYN-------------SVFDGFWKSAEHDK-------------------AFRLFQAM 682
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
+ GCSP F Y+ L+ L+ + +D A + EE G P
Sbjct: 683 KSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDP 726
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 172/367 (46%), Gaps = 13/367 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN+++D L K ++ ++NL M P+H TF +M + ++ A F
Sbjct: 343 TYNTLMDSLVKSGKYIDAFNLAQMMLRRDCK-PSHFTFNLMIDMFCKVGQLDLAYELFQL 401
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + G L D +Y ++ C + +A++L + +V YN I+ G
Sbjct: 402 MTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVV------TYNSIVSG 455
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K S + E +E + G D+ + S +D +CKS + A KL +EM++ G D
Sbjct: 456 LCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPD 515
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
VVAY +I ++ +D ++ + EM + GC P+V+T + VI LC++ RVR+ +L
Sbjct: 516 VVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLK 575
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M ++G PD I Y L K E L+ M ++G P + TY +L+ K +
Sbjct: 576 TMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVS 635
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP--RE 386
L + + ME GC PD YN++ D D A + + M ++G S P
Sbjct: 636 RLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYS 695
Query: 387 ELGTKLV 393
L TKLV
Sbjct: 696 LLLTKLV 702
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 165/344 (47%), Gaps = 19/344 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++I+ K D + L ++M +N S P+ T+ I+ Y + +
Sbjct: 273 TYNTLINGFCKLGNMDEAVVLFNQMLENSCS-PDVFTYNILIDGYCKQERPQDGAKLLQE 331
Query: 93 LDEFGLKDE-VSYCNLVDALCEYKHVIEA----QELCFGENKNVGFSGLVEMNKTKIYNM 147
+ ++G + ++Y L+D+L + I+A Q + + K F+ +N+
Sbjct: 332 MVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFT----------FNL 381
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++ + K+ E ++ M RG + D+++Y+I + C++ + A +L + M + G
Sbjct: 382 MIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAG 441
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
DVV YN+++ + + VD A VY +R G VVTC+T+I LC++ R+ +A
Sbjct: 442 CPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAE 501
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKF 324
+L EM + G PDV+ Y K ++ L F M++ G P + TY +++ K
Sbjct: 502 KLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKL 561
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
+ +R ++ K M E G +PD Y +++D L D A
Sbjct: 562 CKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEA 605
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 171/375 (45%), Gaps = 18/375 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+++I+ K +F ++ L+ M+ +P++A + + K V+ A+ +
Sbjct: 169 TYSTLINGFCKARDFQQAYRLLDEMEKR-GIVPHNAVYNTIIKGLCDNGRVDSALVHYRD 227
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ ++Y LVDALC+ + +A L + G + V YN ++ G+
Sbjct: 228 MQRNCAPSVITYTILVDALCKSARISDAS-LILEDMIEAGCAPNV-----VTYNTLINGF 281
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K+ + + +M + D+ +Y+I +D CK +P KL +EM K G + +
Sbjct: 282 CKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNF 341
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
+ YNT++ ++ S A + + M C+PS T N +I + C+ G++ AY +
Sbjct: 342 ITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQL 401
Query: 273 MPKKGCVPDVITYH------CFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
M +GC+PD+ TY+ C ++ R++L +RM E+G P + TY ++ +
Sbjct: 402 MTDRGCLPDIYTYNIMISGACRANRIDDARQLL---ERMTEAGCPPDVVTYNSIVSGLCK 458
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPRE 386
+ + V++ + G D + L+D L LD A K EM G + P
Sbjct: 459 ASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNG--SAPDV 516
Query: 387 ELGTKLVQGGLDGEQ 401
T L+ G +Q
Sbjct: 517 VAYTILIHGFCKADQ 531
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 133/283 (46%), Gaps = 10/283 (3%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWG 159
D ++Y L++ C+ + +A L K G+V N +YN I++G
Sbjct: 166 DSITYSTLINGFCKARDFQQAYRLLDEMEKR----GIVPHNA--VYNTIIKGLCDNGRVD 219
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+ +M +R + +Y+I +D +CKS + A + ++M + G +VV YNT+I
Sbjct: 220 SALVHYRDM-QRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLI 278
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
+D A+ ++ +M E C P V T N +I C+ R ++ +L EM K GC
Sbjct: 279 NGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCE 338
Query: 280 PDVITYHCFFRCLEKPREILGLFD---RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVV 336
P+ ITY+ L K + + F+ M+ +P T+ +++ F + G L + +
Sbjct: 339 PNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYEL 398
Query: 337 WKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++ M + GC PD + YN ++ +D AR+ E M G
Sbjct: 399 FQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAG 441
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 88/191 (46%), Gaps = 4/191 (2%)
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
K +A L+K + D + Y+T+I + A R+ EM + G P N
Sbjct: 147 KAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYN 206
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIES 308
T+IK LC+NGRV A +M ++ C P VITY L K I + + MIE+
Sbjct: 207 TIIKGLCDNGRVDSALVHYRDM-QRNCAPSVITYTILVDALCKSARISDASLILEDMIEA 265
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G P + TY L+ F + G + V++ +M E CSPD F YN L+D +
Sbjct: 266 GCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDG 325
Query: 369 RKYDEEMFAKG 379
K +EM G
Sbjct: 326 AKLLQEMVKYG 336
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 179/391 (45%), Gaps = 38/391 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY I +LG+ + D ++ ++ RM D+ P+ T+ ++ TA +++AM F K
Sbjct: 266 TYTICIRVLGRDGKIDEAYRIMKRMDDDGCG-PDVVTYTVLIDALCTARKLDDAMCLFTK 324
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHV-----------------------IEAQELCFGEN 128
+ K D+V+Y L+D + H+ I LC
Sbjct: 325 MKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGR 384
Query: 129 KNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
N F L M K + YN ++ G + + + + M+ GV ++Y +
Sbjct: 385 INEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYIL 444
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D KSG P KA++ +++MK +GI ++VA N + ++ + A ++ E++ G
Sbjct: 445 LIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSG 504
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REIL 299
P VT N ++K + G+V EA +L+EM K C PDVI + L K E
Sbjct: 505 LAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAW 564
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+F RM E + P + TY +LL G+ G ++ +++ M GCSP+ +N L+D L
Sbjct: 565 QMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCL 624
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPREELGT 390
+D+A K MF K + R ++ T
Sbjct: 625 CKNDEVDLALK----MFYKMTTMNCRPDVLT 651
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 151/298 (50%), Gaps = 19/298 (6%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T TYNS+ID GK + + ++L M PN T+ ++ V ++ +++AM +
Sbjct: 825 TFTYNSLIDAHGKSGKINELFDLYDEMLTRGCK-PNTITYNMVISNLVKSNRLDKAMDLY 883
Query: 91 NKL--DEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIY 145
L +F ++ L+D L + + +A E+ F G+V + IY
Sbjct: 884 YNLVSGDFS-PTPCTFGPLIDGLLKSGRLDDAHEM---------FDGMVHYGCRPNSAIY 933
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N+++ G+ K+ EF++ M K G+ DL SY+I +DI+C +G+ A+ ++++K+
Sbjct: 934 NILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQ 993
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G+ D+VAYN +I +G S+ + A+ ++ EM+ G P + T N++I L G + E
Sbjct: 994 AGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEE 1053
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFR--CLEKPREIL-GLFDRMIESGIRPKMDTYVML 320
A + E+ G P+V TY+ R L E+ G++ +M+ G P T+ L
Sbjct: 1054 AGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 121/239 (50%), Gaps = 3/239 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y +I + F + E+M + G V + +SY+ + + +SG +A+++Y+ M
Sbjct: 162 YLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMV 221
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+G+K + ++ ++ A G + M + EM MG +P++ T I++L +G++
Sbjct: 222 SEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKID 281
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
EAY ++ M GC PDV+TY L R++ + LF +M S +P TYV LL
Sbjct: 282 EAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLL 341
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
KF G L V +W +ME G +PD + LV+AL G ++ A + M +G+
Sbjct: 342 DKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGV 400
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 179/413 (43%), Gaps = 48/413 (11%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDIL-------GKFFEFDLSWNLIHRMKDNP 61
+D AL +F V + HTT+T N +++IL F FDL I R
Sbjct: 102 SDPIHALFYFKSVGELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRR---- 157
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEA 120
N T+ I+FK + +A K+ E G + + SY L+ L + EA
Sbjct: 158 ----NVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEA 213
Query: 121 QEL---------------------CFGENKNV-GFSGLVEMNKTK-------IYNMILRG 151
E+ G+ +N+ GL+E ++ Y + +R
Sbjct: 214 LEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRV 273
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + + MD G D+ +Y++ +D +C + K A+ L+ +MK K D
Sbjct: 274 LGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPD 333
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V Y T++ +D +++ EM G P VVT ++ LC+ GR+ EA+ +L
Sbjct: 334 KVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLD 393
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M K+G +P++ TY+ L + + L LF M G+ P TY++L+ G+ G
Sbjct: 394 TMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSG 453
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
++KM+ G +P+ A NA + +L + G L A+ E+ + GL+
Sbjct: 454 HPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLA 506
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 130/285 (45%), Gaps = 8/285 (2%)
Query: 99 KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWW 158
KD+ ++ LC++K A+ + K +G + K+YN+++ G+ ++
Sbjct: 752 KDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTL-----KVYNLLIDGFLEVHNV 806
Query: 159 GKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTV 218
+EEM G D +Y+ +D KSGK + LY EM +G K + + YN V
Sbjct: 807 EVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMV 866
Query: 219 IRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGC 278
I + S +D AM +Y + P+ T +I L ++GR+ +A+ + M GC
Sbjct: 867 ISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGC 926
Query: 279 VPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFV 335
P+ Y+ K + F RM++ GIRP + +Y +L+ G +
Sbjct: 927 RPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALH 986
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
++K+++ G PD AYN +++ L + A EM +G+
Sbjct: 987 YFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGI 1031
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 165/393 (41%), Gaps = 53/393 (13%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T T+N+++D L K E DL+ + ++M + P+ TF + ++ + + A+ F
Sbjct: 614 TITFNTLLDCLCKNDEVDLALKMFYKMT-TMNCRPDVLTFNTIIHGFIKQNQIKNAIWLF 672
Query: 91 NKLDEFGLKDEVSYCNLVDALCEYKHVIEA----QELCFGENKNVGFSGLVEMNKTKIYN 146
+++ + D V+ C L+ + + + +A ++ + N+ S +
Sbjct: 673 HQMKKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRS---------FWE 723
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY-KEMKK 205
++ G + K F E + R + KD + ++CK K A ++ K K+
Sbjct: 724 DVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKE 783
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G+K + YN +I V+ A ++ EM+ GC P T N++I ++G++ E
Sbjct: 784 LGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINE 843
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE--------------------------IL 299
+ + EM +GC P+ ITY+ L K I
Sbjct: 844 LFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLID 903
Query: 300 GL------------FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
GL FD M+ G RP Y +L+ +G+ G + +K+M + G P
Sbjct: 904 GLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRP 963
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
D +Y LVD L G +D A Y E++ GL
Sbjct: 964 DLKSYTILVDILCIAGRVDDALHYFEKLKQAGL 996
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 149/347 (42%), Gaps = 10/347 (2%)
Query: 37 VIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEF 96
+I +L K + ++ N+ + P + ++ ++ H V A F ++
Sbjct: 760 IIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSA 819
Query: 97 G-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKM 155
G D +Y +L+DA + + E +L + E G T YNM++ K
Sbjct: 820 GCAPDTFTYNSLIDAHGKSGKINELFDL-YDEMLTRGCK-----PNTITYNMVISNLVKS 873
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
+ K + + + ++ +D + KSG+ A +++ M G + + Y
Sbjct: 874 NRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIY 933
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
N ++ G VD A ++ M + G +P + + ++ +LC GRV +A ++ +
Sbjct: 934 NILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQ 993
Query: 276 KGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
G PD++ Y+ L ++ E L LF M GI P + TY L+ G G +
Sbjct: 994 AGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEE 1053
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++++++ +G P+ F YNAL+ G ++A ++M G
Sbjct: 1054 AGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGG 1100
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 152/331 (45%), Gaps = 13/331 (3%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T YN +ID + +++WNL MK + P+ T+ + + + +NE
Sbjct: 789 TLKVYNLLIDGFLEVHNVEVAWNLFEEMK-SAGCAPDTFTYNSLIDAHGKSGKINELFDL 847
Query: 90 FNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK-IYNM 147
++++ G K + ++Y ++ L + + +A +L + SG + + T +
Sbjct: 848 YDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNL-----VSG--DFSPTPCTFGP 900
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++ G K E ++ M G + Y+I ++ K G A + +K M K+G
Sbjct: 901 LIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEG 960
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
I+ D+ +Y ++ + ++ VD A+ + ++++ G P +V N +I L + R EA
Sbjct: 961 IRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEAL 1020
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLE---KPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
++ EM +G VPD+ TY+ L E +++ + G++P + TY L+R +
Sbjct: 1021 SLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGY 1080
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
G + ++KKM GC P+ + L
Sbjct: 1081 TLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 144/306 (47%), Gaps = 12/306 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++I L + D + +L M ++ P T+ ++ + + +A+ TF K
Sbjct: 406 TYNTLISGLLRANRLDDALDLFSNM-ESLGVEPTAYTYILLIDYHGKSGHPGKALETFEK 464
Query: 93 LDEFGLKDEVSYCNL-VDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G+ + CN + +L E + EA+ + F E K+ G + + YNM+++
Sbjct: 465 MKARGIAPNIVACNASLYSLAEMGRLGEAKAM-FNELKSSGLA-----PDSVTYNMMMKC 518
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K+ + + EM K D+ + +D + K+G+ +A +++ M++ +
Sbjct: 519 YSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPT 578
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
VV YN ++ +G + A++++ M GC P+ +T NT++ LC+N V A +
Sbjct: 579 VVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFY 638
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+M C PDV+T++ K +I + LF +M + +RP T LL + G
Sbjct: 639 KMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM-KKLLRPDHVTLCTLLPGVIKSG 697
Query: 329 FLRPVF 334
+ F
Sbjct: 698 QIEDAF 703
>gi|297819626|ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323534|gb|EFH53955.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1188
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 187/377 (49%), Gaps = 18/377 (4%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSIPNHATFRIMFK 75
FF W + H+ + S++ IL K +F W LI M K+NP I F ++ +
Sbjct: 120 FFLWATKQPGYCHSYEVCKSMVKILSKMRQFGAVWGLIEEMRKENPELI-EPELFVVLIR 178
Query: 76 RYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFS 134
R+ +A++V +A+ +++ ++G + DE + L+DALC+ V +A ++ F
Sbjct: 179 RFASANMVKKAVEVLDEMPKYGFEPDEYVFGCLLDALCKNGSVKDASKV---------FE 229
Query: 135 GLVEM--NKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
+ E + + +L GW + + +E +M + G+ D+ ++ + +GK
Sbjct: 230 DMREKIPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGK 289
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG-VDFAMRVYREMREMGCQPSVVTCN 251
A L +M+K+G + + Y +I+A+ +E +D AMRV+ EM GC+ +VT
Sbjct: 290 MADAYDLLNDMRKRGYEPNANCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYT 349
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIES 308
+I C+ G + + Y+VL +M KKG +P +TY EK E L L ++M +
Sbjct: 350 ALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQILVAHEKKEQFEECLELIEKMKQI 409
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G P + Y +++R + ++ +W +ME G SP + +++ +G L A
Sbjct: 410 GCHPDLLIYNVVIRLACNFREVKEAVRLWNEMEANGLSPGADMFVIMINGFTSQGYLIEA 469
Query: 369 RKYDEEMFAKGLSAKPR 385
+ +EM ++G+ + P+
Sbjct: 470 CSHFKEMVSRGIFSAPQ 486
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 132/346 (38%), Gaps = 85/346 (24%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKR 76
F N + H D Y+ + D+ + +E PN + ++ +
Sbjct: 277 FTNLLSGYAHAGKMADAYDLLNDMRKRGYE------------------PNANCYTVLIQA 318
Query: 77 YV-TAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFS 134
T ++EAM F +++ +G + D V+Y L+ C++ + + G+S
Sbjct: 319 LCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMI------------DKGYS 366
Query: 135 GLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
L +M K + Y IL K + +C E E+M + G DL Y++ + + C
Sbjct: 367 VLDDMRKKGVMPSQVTYMQILVAHEKKEQFEECLELIEKMKQIGCHPDLLIYNVVIRLAC 426
Query: 189 KSGKPWKAVKLYKEMKKKGIK----MDVVAYNT------VIRAVG-----VSEGVDFAMR 233
+ +AV+L+ EM+ G+ M V+ N +I A VS G+ F+
Sbjct: 427 NFREVKEAVRLWNEMEANGLSPGADMFVIMINGFTSQGYLIEACSHFKEMVSRGI-FSAP 485
Query: 234 VYREMREM-------------------------GCQPSVVTCNTVIKLLCENGRVREAYA 268
Y ++ + C+ +V I L G V+EA +
Sbjct: 486 QYGTLKSLLNTLLRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALFAKGHVKEACS 545
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKM 314
+M + +P TY + L K L++R I + I K+
Sbjct: 546 YCLDMMEMDLMPQPNTYVKLMKGLNK------LYNRTIAAEITEKV 585
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 189/392 (48%), Gaps = 15/392 (3%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
+ ++ +FN + D F ++ +N+++ + F+ W + K +
Sbjct: 107 SQSLDSSISYFNEM-VDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKIKVD--LDV 163
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFG 126
+F I+ K A + ++ +L EFG V Y L+D C+ + +A++L F
Sbjct: 164 YSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFF- 222
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
+G GLV T Y +++ G FK + E +E+M + GV +L++Y+ M+
Sbjct: 223 ---EMGKFGLVANEWT--YTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ 277
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
CK G+ A KL+ EM+++G+ ++V YNT+I + + A +V +M+ G P+
Sbjct: 278 HCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPN 337
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFD 303
++T NT+I C G++ +A ++ ++ +G P ++TY+ K + G +
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVK 397
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
M E GI+P TY +L+ F R + + MEELG +PD Y+ L+ KG
Sbjct: 398 EMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKG 457
Query: 364 MLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
++ A + + M AK L +P + + +V G
Sbjct: 458 QMNEASRLFKLMVAKKL--EPNKVIYNTMVLG 487
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 145/316 (45%), Gaps = 13/316 (4%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
K+ E + ++ D F + TYN V++ K ++ L M++ S N T+
Sbjct: 250 KQGFEMYEKMQEDGVFPNLY-TYNCVMNQHCKDGRTKDAFKLFDEMRERGVSC-NIVTYN 307
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKN 130
+ NEA +++ G+ ++Y L+D C + +A LC ++
Sbjct: 308 TLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLC----RD 363
Query: 131 VGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS 190
+ GL T YN+++ G+ K + +EM++RG+ +Y+I +D +
Sbjct: 364 LKSRGLSPSLVT--YNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARM 421
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTC 250
KA++L M++ G+ DV Y+ +I + ++ A R+++ M +P+ V
Sbjct: 422 DNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIY 481
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIE 307
NT++ C+ G A + EM +K P+V +Y L K +E GL ++MI+
Sbjct: 482 NTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMID 541
Query: 308 SGIRPKMDTYVMLLRK 323
+GI P D+ + L+ +
Sbjct: 542 TGIDPS-DSILNLISR 556
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 73/158 (46%), Gaps = 7/158 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
P+ T+ I+ + + +A+ + ++E GL +V +Y L+ C + EA L
Sbjct: 406 PSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ + +E NK IYN ++ G+ K + + EM+++ + ++ SY
Sbjct: 466 F-----KLMVAKKLEPNKV-IYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYM 519
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
++++CK K +A L ++M GI N + RA
Sbjct: 520 IEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLISRA 557
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 160/332 (48%), Gaps = 10/332 (3%)
Query: 69 TFRIMFKRYVTAHLVNEAMG-TFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFG 126
TF + K ++AM ++ E G + D SY NL+ LC+ EA EL
Sbjct: 129 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHM 188
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
+ G ++ YN +L G+FK K + EM RG++ D+ +YS +
Sbjct: 189 MADDRGGGSPPDVVS---YNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAA 245
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+CK+ KA+++ M K G+ D + YN+++ S A+ ++MR G +P+
Sbjct: 246 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPN 305
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFD 303
VVT ++++ LC+NGR EA + M K+G PD+ TY + E+ L D
Sbjct: 306 VVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLD 365
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
M+ +GI+P + +L+ + + + +V+ KM + G +P+ Y ++D L G
Sbjct: 366 LMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSG 425
Query: 364 MLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+D A Y E+M +GL+ P + T L+ G
Sbjct: 426 SVDDAMLYFEQMIDEGLT--PNIIVYTSLIHG 455
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 150/320 (46%), Gaps = 10/320 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+H F I+ Y V++AM F+K+ + GL + V Y ++D LC+ V +A L
Sbjct: 374 PDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAM-L 432
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + + G + +Y ++ G W K E EM RG+ + ++
Sbjct: 433 YFEQMIDEGLT-----PNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSI 487
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D CK G+ ++ KL+ M + G+K D++ YNT+I ++ +D A ++ M +G
Sbjct: 488 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGV 547
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG--- 300
+P +VT T+I C R+ +A A+ EM G P++ITY+ + L R
Sbjct: 548 KPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 607
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L+ + +SG + ++ TY ++L + +++ + + +N ++ AL+
Sbjct: 608 LYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 667
Query: 361 DKGMLDMARKYDEEMFAKGL 380
G +D A+ A GL
Sbjct: 668 KCGRMDEAKDLFAAHSANGL 687
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 163/366 (44%), Gaps = 46/366 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+S+I L K D + +++ M N +P+ T+ + Y ++ EA+GT K
Sbjct: 238 TYSSIIAALCKAQAMDKAMEVLNTMVKN-GVMPDCMTYNSILHGYCSSGQPKEAIGTLKK 296
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G++ + V+Y +L++ LC+ EA+++ F G + Y +L+G
Sbjct: 297 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKI-FDSMTKRGLEPDI-----ATYRTLLQG 350
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + + M + G+ D H ++I + K K +A+ ++ +M++ G+ +
Sbjct: 351 YATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPN 410
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV----------TC----------- 250
VV Y TVI + S VD AM + +M + G P+++ TC
Sbjct: 411 VVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELIL 470
Query: 251 --------------NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE- 293
N++I C+ GRV E+ + M + G PD+ITY+ CL
Sbjct: 471 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAG 530
Query: 294 KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
K E L M+ G++P + TY L+ + R + ++K+M G SP+ YN
Sbjct: 531 KMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYN 590
Query: 354 ALVDAL 359
++ L
Sbjct: 591 IILQGL 596
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 114/268 (42%), Gaps = 50/268 (18%)
Query: 173 VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM 232
V +H+Y+I + C++G+ + KKG ++D + + +++ + + AM
Sbjct: 88 VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147
Query: 233 R-VYREMREMGCQPSVVTCNTVIKLLCENGRVRE-------------------------- 265
V R M E+GC P V + N ++K LC+ R +E
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207
Query: 266 ------------AYAVLAEMPKKGCVPDVITYH------CFFRCLEKPREILGLFDRMIE 307
AY+ EM +G +PDV+TY C + ++K E+L + M++
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVL---NTMVK 264
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
+G+ P TY +L + G + KKM G P+ Y++L++ L G
Sbjct: 265 NGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE 324
Query: 368 ARKYDEEMFAKGLSAKPREELGTKLVQG 395
ARK + M +GL +P L+QG
Sbjct: 325 ARKIFDSMTKRGL--EPDIATYRTLLQG 350
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 157/377 (41%), Gaps = 45/377 (11%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + A+ +F + D T Y S+I L ++D + LI M D +
Sbjct: 422 CKSGSVDDAMLYFEQM-IDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICL- 479
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N F + + V E+ F+ + G+K D ++Y L+D C + EA +L
Sbjct: 480 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKL- 538
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+VG + Y ++ G+ ++S ++EM GV ++ +Y+I +
Sbjct: 539 LASMVSVGVKPDI-----VTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 593
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ + + A +LY + K G ++++ YN ++ + + D A+R+++ + Q
Sbjct: 594 QGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 653
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDR 304
T N +I L + GR+ EA + A G VPDV TY + +
Sbjct: 654 LETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSL-------------MAEN 700
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
+IE G ++D ++ MEE GCS D N++V L+ +G
Sbjct: 701 LIEQGSLEELDD-------------------LFLSMEENGCSADSRMLNSIVRKLLQRGD 741
Query: 365 LDMARKY----DEEMFA 377
+ A Y DE+ F+
Sbjct: 742 ITRAGTYLFMIDEKHFS 758
>gi|242071011|ref|XP_002450782.1| hypothetical protein SORBIDRAFT_05g018050 [Sorghum bicolor]
gi|241936625|gb|EES09770.1| hypothetical protein SORBIDRAFT_05g018050 [Sorghum bicolor]
Length = 528
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 190/390 (48%), Gaps = 31/390 (7%)
Query: 12 KRALEFFNWVETDCHFTHT---TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
K AL + F +T D Y++V+D L + +FD +W ++ + ++ P
Sbjct: 98 KLALSLLHAARLHPSFVNTRPPPDAYDAVVDALARARQFDAAWRVVVDASADGAASPR-- 155
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS--YCNLVDALCEYKHVIEAQELCFG 126
+F ++ +RYV A + +A+ F+ ++ F ++ S + L+D LC+YK+ A E+ F
Sbjct: 156 SFAVLARRYVAAGMTRQAVRAFDDMEAFVGREANSAEFATLLDTLCKYKYPKVATEI-FN 214
Query: 127 ENKNVGFSGLVEMNKT-KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
+ K + N K+Y +++ GW K++ R+F ++M G+ ++ +Y+I ++
Sbjct: 215 KRK-------YKYNPNEKMYTILIYGWCKVNRNDMARKFLKDMLDHGIEPNIVTYNILLN 267
Query: 186 IMCK--SGKP--------WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
+C+ S P A + KEM+ +GI+ DV +Y+ ++ + + + ++
Sbjct: 268 GICRHASLHPDYRFDRTVHSAEDVLKEMRDRGIEPDVTSYSIILHVYSRAHKPELCVCMF 327
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP 295
R M++ G P+V T +VIK L GR+ +A +L EM +G P TY+CFF+
Sbjct: 328 RSMKDRGICPTVATYTSVIKCLASCGRLEDAETLLDEMVAEGVCPSPATYNCFFKEYRGR 387
Query: 296 REILG---LFDRMIESG--IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF 350
++ G L+++M + G P + TY +LL F + V +W M E PD
Sbjct: 388 NDVSGALQLYNKMKQPGSLTAPDIHTYNILLGMFIKLNRHGSVKDIWSDMCESTVGPDLD 447
Query: 351 AYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+Y L+ A ++ EM KG
Sbjct: 448 SYTLLIHGFCASQKWREACQFFMEMIEKGF 477
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 91/225 (40%), Gaps = 30/225 (13%)
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
++ +D +CK P A +++ + K K + Y +I D A + ++M
Sbjct: 193 FATLLDTLCKYKYPKVATEIFNKRKYK-YNPNEKMYTILIYGWCKVNRNDMARKFLKDML 251
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL 299
+ G +P++VT N ++ +C + + Y F R + ++L
Sbjct: 252 DHGIEPNIVTYNILLNGICRHASLHPDYR-------------------FDRTVHSAEDVL 292
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
M + GI P + +Y ++L + R +++ M++ G P Y +++ L
Sbjct: 293 ---KEMRDRGIEPDVTSYSIILHVYSRAHKPELCVCMFRSMKDRGICPTVATYTSVIKCL 349
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKP-------REELGTKLVQGGL 397
G L+ A +EM A+G+ P +E G V G L
Sbjct: 350 ASCGRLEDAETLLDEMVAEGVCPSPATYNCFFKEYRGRNDVSGAL 394
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 74/193 (38%), Gaps = 39/193 (20%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TY SVI L + + L+ M P+ AT+ FK Y + V+ A+
Sbjct: 338 TVATYTSVIKCLASCGRLEDAETLLDEMVAE-GVCPSPATYNCFFKEYRGRNDVSGALQL 396
Query: 90 FNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+NK+ + G + YN++L
Sbjct: 397 YNKMKQ--------------------------------------PGSLTAPDIHTYNILL 418
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
+ K++ G ++ W +M + V DL SY++ + C S K +A + + EM +KG
Sbjct: 419 GMFIKLNRHGSVKDIWSDMCESTVGPDLDSYTLLIHGFCASQKWREACQFFMEMIEKGFL 478
Query: 210 MDVVAYNTVIRAV 222
+ + T+ R +
Sbjct: 479 PQKITFETLYRGL 491
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 179/389 (46%), Gaps = 14/389 (3%)
Query: 11 WKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
K+A EF ++E F +YN++I + + ++ M+ P+ T+
Sbjct: 189 LKKAREFIGFME-GLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIE-PDSYTY 246
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENK 129
+ + EA G F+K+ E GL + V+Y L+D C + E F
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL----ERAFSYRD 302
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
+ G+ M YN+++ F G+ + +EM K+G++ D +Y+I ++ +
Sbjct: 303 EMVKKGI--MPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSR 360
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
G +A L+ EM KGI+ V Y ++I + + A ++ ++ + G P V+
Sbjct: 361 CGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIM 420
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF--RCLE-KPREILGLFDRMI 306
N +I C NG V A+ +L EM +K PD +T++ RC E K E L D M
Sbjct: 421 FNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMK 480
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
GI+P +Y L+ +GR G ++ F V +M +G +P YNAL+ L D
Sbjct: 481 XRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGD 540
Query: 367 MARKYDEEMFAKGLSAKPREELGTKLVQG 395
+A + +EM KG+S P + L++G
Sbjct: 541 LAEELLKEMVNKGIS--PDDSTYLSLIEG 567
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 12/225 (5%)
Query: 162 REFWEEMD---KRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTV 218
RE ++E+ R VK SI D++ GK KA + M+ G K +VV+YNT+
Sbjct: 161 RELFDELTLSRDRLSVKS----SIVFDLL--EGKLKKAREFIGFMEGLGFKPNVVSYNTI 214
Query: 219 IRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGC 278
I ++ A R+ MR G +P T ++I +C+ GR+ EA + +M + G
Sbjct: 215 IHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGL 274
Query: 279 VPDVITYHCFFRCLEKPREILGLF---DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFV 335
VP+ +TY+ ++ F D M++ GI P + TY +L+ G +
Sbjct: 275 VPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADD 334
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ K+M + G PD YN L++ G A EM +KG+
Sbjct: 335 MIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGI 379
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 89/222 (40%), Gaps = 23/222 (10%)
Query: 10 DWKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
+ KRA + N + TH T Y S+I +L + + +L ++ D S P+
Sbjct: 363 NAKRAFDLHNEMLSKGIEPTHVT--YTSLIYVLSRRNRMKEADDLFEKILDQGVS-PDVI 419
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE 127
F M + V A ++D + DEV++ L+ C V EA+ L
Sbjct: 420 MFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARML---- 475
Query: 128 NKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
L EM I YN ++ G+ + +EM G L +Y+
Sbjct: 476 --------LDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYN 527
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
+ +CK+ + A +L KEM KGI D Y ++I +G
Sbjct: 528 ALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMG 569
>gi|413945076|gb|AFW77725.1| ATP binding protein isoform 1 [Zea mays]
gi|413945077|gb|AFW77726.1| ATP binding protein isoform 2 [Zea mays]
gi|413945078|gb|AFW77727.1| ATP binding protein isoform 3 [Zea mays]
Length = 634
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 176/377 (46%), Gaps = 16/377 (4%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
+ + FF W FTHTT TY ++ ILGK +F+ +I M + + F+
Sbjct: 209 RPSYRFFRWATVSGGFTHTTITYCKMLHILGKTRQFESMVAMIQEMGK--AGALSMDAFK 266
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKN 130
+ K + A + A+G F + + G D V N L+ AL + EA+++ F +
Sbjct: 267 VAIKSFAAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALAKEGLGREARQV-FDKMHG 325
Query: 131 VGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS 190
L + Y ++ W + W EM ++G+ D+ ++ ++ + +
Sbjct: 326 QYSPDL------RSYTALMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRG 379
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTC 250
+ +AVK+++ MK KG +V Y +IR +D AM + EM+E CQP V T
Sbjct: 380 QRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATY 439
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIE 307
++ ++ AVL EM +KGC PD TY+ + L P + ++ +MI+
Sbjct: 440 TCLLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIK 499
Query: 308 SGIRPKMDTYVMLLRKF--GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
G+ P + TY M+++ + G + VW++M + G PD +Y ++ I G
Sbjct: 500 KGLEPTIHTYNMMMKSYFVGDSNYAMGC-AVWEEMHQRGICPDVNSYTVFINGHIRHGRP 558
Query: 366 DMARKYDEEMFAKGLSA 382
+ A KY EEM KG+ A
Sbjct: 559 EEAYKYIEEMINKGMKA 575
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 10/227 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
P+ M + + EA+ F + G V +Y L+ C+ + A E
Sbjct: 364 PDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKMDMAME- 422
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
CF E + V Y +L G+ + EEM ++G D +Y+
Sbjct: 423 CFEEMQEAKCQPDV-----ATYTCLLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNAL 477
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM--RVYREMREM 241
+ ++ P A ++YK+M KKG++ + YN ++++ V + ++AM V+ EM +
Sbjct: 478 IKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFVGDS-NYAMGCAVWEEMHQR 536
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
G P V + I +GR EAY + EM KG I Y+ F
Sbjct: 537 GICPDVNSYTVFINGHIRHGRPEEAYKYIEEMINKGMKAPQIDYNKF 583
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 160/332 (48%), Gaps = 10/332 (3%)
Query: 69 TFRIMFKRYVTAHLVNEAMG-TFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFG 126
TF + K ++AM ++ E G + D SY NL+ LC+ EA EL
Sbjct: 129 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHM 188
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
+ G ++ YN +L G+FK K + EM RG++ D+ +YS +
Sbjct: 189 MADDRGGGSPPDVVS---YNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAA 245
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+CK+ KA+++ M K G+ D + YN+++ S A+ ++MR G +P+
Sbjct: 246 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPN 305
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFD 303
VVT ++++ LC+NGR EA + M K+G PD+ TY + E+ L D
Sbjct: 306 VVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLD 365
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
M+ +GI+P + +L+ + + + +V+ KM + G +P+ Y ++D L G
Sbjct: 366 LMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSG 425
Query: 364 MLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+D A Y E+M +GL+ P + T L+ G
Sbjct: 426 SVDDAMLYFEQMIDEGLT--PNIIVYTSLIHG 455
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 151/325 (46%), Gaps = 10/325 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+H F I+ Y V++AM F+K+ + GL + V Y ++D LC+ V +A L
Sbjct: 374 PDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAM-L 432
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + + G + +Y ++ G W K E EM RG+ + ++
Sbjct: 433 YFEQMIDEGLT-----PNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSI 487
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D CK G+ ++ KL+ M + G+K D++ YNT+I ++ +D A ++ M +G
Sbjct: 488 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGV 547
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG--- 300
+P +VT T+I C R+ +A A+ EM G P++ITY+ + L R
Sbjct: 548 KPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 607
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L+ + +SG + ++ TY ++L + +++ + + +N ++ AL+
Sbjct: 608 LYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 667
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPR 385
G +D A+ A GL R
Sbjct: 668 KCGRMDEAKDLFAAHSANGLVPDVR 692
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 163/366 (44%), Gaps = 46/366 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+S+I L K D + +++ M N +P+ T+ + Y ++ EA+GT K
Sbjct: 238 TYSSIIAALCKAQAMDKAMEVLNTMVKN-GVMPDCMTYNSILHGYCSSGQPKEAIGTLKK 296
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G++ + V+Y +L++ LC+ EA+++ F G + Y +L+G
Sbjct: 297 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKI-FDSMTKRGLEPDI-----ATYRTLLQG 350
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + + M + G+ D H ++I + K K +A+ ++ +M++ G+ +
Sbjct: 351 YATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPN 410
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV----------TC----------- 250
VV Y TVI + S VD AM + +M + G P+++ TC
Sbjct: 411 VVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELIL 470
Query: 251 --------------NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE- 293
N++I C+ GRV E+ + M + G PD+ITY+ CL
Sbjct: 471 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAG 530
Query: 294 KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
K E L M+ G++P + TY L+ + R + ++K+M G SP+ YN
Sbjct: 531 KMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYN 590
Query: 354 ALVDAL 359
++ L
Sbjct: 591 IILQGL 596
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 44/265 (16%)
Query: 173 VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM 232
V +H+Y+I + C++G+ + KKG ++D + + +++ + + AM
Sbjct: 88 VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147
Query: 233 R-VYREMREMGCQPSVVTCNTVIKLLCENGRVRE-------------------------- 265
V R M E+GC P V + N ++K LC+ R +E
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207
Query: 266 ------------AYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGI 310
AY+ EM +G +PDV+TY L K + + + + + M+++G+
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
P TY +L + G + KKM G P+ Y++L++ L G ARK
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327
Query: 371 YDEEMFAKGLSAKPREELGTKLVQG 395
+ M +GL +P L+QG
Sbjct: 328 IFDSMTKRGL--EPDIATYRTLLQG 350
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 157/377 (41%), Gaps = 45/377 (11%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + A+ +F + D T Y S+I L ++D + LI M D +
Sbjct: 422 CKSGSVDDAMLYFEQM-IDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICL- 479
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N F + + V E+ F+ + G+K D ++Y L+D C + EA +L
Sbjct: 480 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKL- 538
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+VG + Y ++ G+ ++S ++EM GV ++ +Y+I +
Sbjct: 539 LASMVSVGVKPDI-----VTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 593
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ + + A +LY + K G ++++ YN ++ + + D A+R+++ + Q
Sbjct: 594 QGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 653
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDR 304
T N +I L + GR+ EA + A G VPDV TY + +
Sbjct: 654 LETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSL-------------MAEN 700
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
+IE G ++D ++ MEE GCS D N++V L+ +G
Sbjct: 701 LIEQGSLEELDD-------------------LFLSMEENGCSADSRMLNSIVRKLLQRGD 741
Query: 365 LDMARKY----DEEMFA 377
+ A Y DE+ F+
Sbjct: 742 ITRAGTYLFMIDEKHFS 758
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 176/355 (49%), Gaps = 18/355 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT-FN 91
TYNS+++ K + + L M + P+ T+ + V EA+ F+
Sbjct: 80 TYNSLLNAFCKETKMKEAMELFKTMAEKGFE-PDVVTYSTIISGLCKTGKVTEALEMLFH 138
Query: 92 KLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
K+ E G + V+Y L++ LC+ +++ A +L + + G V N T YN IL
Sbjct: 139 KMIERGCSANTVAYNALINGLCKDENIERAYKLL----EEMASKGYVPDNIT--YNTILS 192
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
G +M + ++F++ M RG D+ +Y+ +D + K GK +A+KL+K++ KG
Sbjct: 193 GLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMP 252
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
D V YN+++ + +D A ++++M GC P+ T + V+ C +V +A+ VL
Sbjct: 253 DTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVL 312
Query: 271 AEMPKKGCVPDVITYH------CFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
EM K G VPDV+TY+ C ++K E LF M+++G P + +Y ++L
Sbjct: 313 EEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHE---LFSTMVDNGCAPDIVSYSVVLNGL 369
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ + V++ +M E PD +N L+D L G LD A+ ++M G
Sbjct: 370 CKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSG 424
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 151/320 (47%), Gaps = 11/320 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PN TFR++ K + + + F ++ + G+ D + Y L+D + V EA L
Sbjct: 6 PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ E +VG + YN +L + K + + E ++ M ++G D+ +YS
Sbjct: 66 -YEEMVSVGLEPSI-----YTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTI 119
Query: 184 MDIMCKSGKPWKAVK-LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ +CK+GK +A++ L+ +M ++G + VAYN +I + E ++ A ++ EM G
Sbjct: 120 ISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKG 179
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREIL 299
P +T NT++ LC G+V EA MP +G PDV+ Y+ L K E +
Sbjct: 180 YVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAM 239
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
LF +I G P TY +L R + ++KKM GC+P+ Y+ ++
Sbjct: 240 KLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGH 299
Query: 360 IDKGMLDMARKYDEEMFAKG 379
+D A K EEM G
Sbjct: 300 CRAKKVDDAHKVLEEMSKIG 319
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 160/354 (45%), Gaps = 16/354 (4%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN +ID K D + L M + P+ T+ + + + EAM F +
Sbjct: 46 YNILIDGYAKKGRVDEANRLYEEMV-SVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTM 104
Query: 94 DEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
E G + D V+Y ++ LC+ V EA E+ F + G S T YN ++ G
Sbjct: 105 AEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSA-----NTVAYNALINGL 159
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K + + EEM +G V D +Y+ + +C+ GK +A + + M +G DV
Sbjct: 160 CKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDV 219
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
VAYN ++ A+ D AM++++++ G P VT N+++ L + EA + +
Sbjct: 220 VAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKK 279
Query: 273 MPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
M GC P+ TY HC + ++ ++L + M + G P + TY +LL +
Sbjct: 280 MVASGCAPNGATYSIVLSGHCRAKKVDDAHKVL---EEMSKIGAVPDVVTYNILLDGLCK 336
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ ++ M + GC+PD +Y+ +++ L + AR + M + L
Sbjct: 337 TNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKL 390
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 4/208 (1%)
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
+++ + + CK GK KL+++M GI D + YN +I VD A R+Y E
Sbjct: 9 YTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEE 68
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
M +G +PS+ T N+++ C+ +++EA + M +KG PDV+TY L K +
Sbjct: 69 MVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGK 128
Query: 298 ILG----LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
+ LF +MIE G Y L+ + + + + ++M G PD YN
Sbjct: 129 VTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYN 188
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGLS 381
++ L G + A+++ + M ++G S
Sbjct: 189 TILSGLCRMGKVSEAKQFFDSMPSRGYS 216
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 140/327 (42%), Gaps = 47/327 (14%)
Query: 6 CYANDWKRALE--FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
C ALE F +E C + T YN++I+ L K + ++ L+ M +
Sbjct: 124 CKTGKVTEALEMLFHKMIERGC--SANTVAYNALINGLCKDENIERAYKLLEEMA-SKGY 180
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+P++ T+ + V+EA F+ + G D V+Y L+DAL + EA +
Sbjct: 181 VPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMK 240
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMS-------------------------- 156
L F + G+ M T YN IL G + S
Sbjct: 241 L-FKDVIAKGY-----MPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSI 294
Query: 157 -WWGKCR--------EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
G CR + EEM K G V D+ +Y+I +D +CK+ KA +L+ M G
Sbjct: 295 VLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG 354
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
D+V+Y+ V+ + + V A ++ M E P VVT N ++ LC+ G++ EA
Sbjct: 355 CAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAK 414
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEK 294
+L +M GC PD + Y+ L K
Sbjct: 415 DLLDQMTCSGCAPDYVAYNTLMNGLRK 441
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 121/277 (43%), Gaps = 9/277 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A +FF+ + + ++ YN ++D L K + D + L + +P
Sbjct: 195 CRMGKVSEAKQFFDSMPSR-GYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAK-GYMP 252
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ + ++EA F K+ G + +Y ++ C K V +A ++
Sbjct: 253 DTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKV- 311
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
E +G + YN++L G K + K E + M G D+ SYS+ +
Sbjct: 312 LEEMSKIG-----AVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVL 366
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ +CK+ K A L+ M ++ + DVV +N ++ + + +D A + +M GC
Sbjct: 367 NGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCA 426
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
P V NT++ L + GR +A + M +KG + D
Sbjct: 427 PDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 75/181 (41%), Gaps = 41/181 (22%)
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR------- 290
MRE C P+ T V+K C+ G++R+ Y + +M G PD I Y+
Sbjct: 1 MRE--CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGR 58
Query: 291 ------------------------------CLE-KPREILGLFDRMIESGIRPKMDTYVM 319
C E K +E + LF M E G P + TY
Sbjct: 59 VDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYST 118
Query: 320 LLRKFGRWGFLRPVF-VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
++ + G + +++ KM E GCS + AYNAL++ L ++ A K EEM +K
Sbjct: 119 IISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASK 178
Query: 379 G 379
G
Sbjct: 179 G 179
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%)
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
P T+ ++L+ F + G LR + ++++M + G SPD YN L+D KG +D A +
Sbjct: 6 PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65
Query: 372 DEEMFAKGL 380
EEM + GL
Sbjct: 66 YEEMVSVGL 74
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 181/384 (47%), Gaps = 43/384 (11%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +I+ L K + L+ L +MK N + T+ ++ + EA+ F++
Sbjct: 114 TYGILINGLCKARKTGLAIKLHEKMKGNCKG--DVFTYGMIIDSLCKDGMTTEALDMFSE 171
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G L D V Y +L+D LC + + EA E F E + G S V + I+ + G
Sbjct: 172 MIGAGILPDVVVYSSLMDGLCRFGRLKEALEF-FKEMEGRGISADVYTYNSLIHGLSRAG 230
Query: 152 -WFKMSWW-----------------------------GKCREFWEEMDKRGVVKDLHSYS 181
W +++W+ G+ ++ E M +G D+ +Y+
Sbjct: 231 LWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYN 290
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
M+ +C G+ A KL++ + +GIK++V +YN +I + +D A R++ EMR
Sbjct: 291 TLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPK 350
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REI 298
G +PS VT NT+I LC++GRVR A + EM G + TY L K E
Sbjct: 351 GLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEA 410
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL---GCSPDEFAYNAL 355
+ LF + ++ +P ++ + +LL R G L WK+ +E+ G PD AYN L
Sbjct: 411 IDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEE---AWKQFDEISKNGLEPDTIAYNIL 467
Query: 356 VDALIDKGMLDMARKYDEEMFAKG 379
++ L +KGML A K +M KG
Sbjct: 468 INGLCNKGMLSEAVKLLWQMEEKG 491
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 109/221 (49%), Gaps = 4/221 (1%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+ ++EM ++G+ D +Y I ++ +CK+ K A+KL+++MK K DV Y +I ++
Sbjct: 98 QLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMKGN-CKGDVFTYGMIIDSL 156
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
A+ ++ EM G P VV ++++ LC GR++EA EM +G DV
Sbjct: 157 CKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADV 216
Query: 283 ITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
TY+ L + +E+ + M++ G P T+ +L+ + G + + +
Sbjct: 217 YTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILEL 276
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
M G PD YN L++ L G L+ A K E + +G+
Sbjct: 277 MHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGI 317
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 142/321 (44%), Gaps = 18/321 (5%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDIL---GKFFEFDLSWNLIHRMKDNPSSI 64
A WK F N + D F+ T+ +ID L GK E L+H P +
Sbjct: 229 AGLWKEVTWFLNLM-VDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDIL 287
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
T+ + + +A F L + G+K V SY L++ C+ + + EA L
Sbjct: 288 ----TYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRL 343
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F E + G T YN ++ + ++ + EM G L +Y +
Sbjct: 344 -FEEMRPKGLK-----PSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVL 397
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D +CK+G +A+ L++ +KK K ++ ++ ++ + + ++ A + + E+ + G
Sbjct: 398 LDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGL 457
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LG 300
+P + N +I LC G + EA +L +M +KGC+PD IT++ + L K EI +
Sbjct: 458 EPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQ 517
Query: 301 LFDRMIESGIRPKMDTYVMLL 321
L + M P MLL
Sbjct: 518 LLEEMRNRNFSPDEAVTSMLL 538
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 164/356 (46%), Gaps = 14/356 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEF-DLSWNLIHRMKDNPSSI 64
C K ALEFF +E + TYNS+I L + + +++W ++ M D S
Sbjct: 192 CRFGRLKEALEFFKEMEGR-GISADVYTYNSLIHGLSRAGLWKEVTW-FLNLMVDRGFS- 248
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ TF I+ V EA + G + D ++Y L++ LC + +A +L
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKL 308
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + G +++N YN+++ G+ K + +EEM +G+ +Y+
Sbjct: 309 -FESLADRG----IKLNVFS-YNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTL 362
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ +C+SG+ A KL+ EM+ G + + Y ++ + + ++ A+ +++ +++
Sbjct: 363 IGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEH 422
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILG 300
+P++ + ++ +C G++ EA+ E+ K G PD I Y+ L E +
Sbjct: 423 KPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVK 482
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
L +M E G P T+ ++++ + + + ++M SPDE + L+
Sbjct: 483 LLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 4/163 (2%)
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K+G + D V T+++ V + G+ A++++ EM E G T +I LC+ +
Sbjct: 70 KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG 129
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLL 321
A + +M K C DV TY L K E L +F MI +GI P + Y L+
Sbjct: 130 LAIKLHEKM-KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
R+G L+ +K+ME G S D + YN+L+ L G+
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGL 231
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 118/258 (45%), Gaps = 24/258 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI-PNHATFRIMFKRYVTAHLVNEAMGTFN 91
+YN +I+ K + D ++ L M+ P + P+ T+ + + V A F
Sbjct: 323 SYNILINGYCKDQKIDEAFRLFEEMR--PKGLKPSTVTYNTLIGALCQSGRVRTAQKLFV 380
Query: 92 KLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
++ G ++S YC L+D LC+ H+ EA +L F K +E +++++L
Sbjct: 381 EMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDL-FQSIKKTEHKPNIE-----VFSILLD 434
Query: 151 GWFKMSWWGKCREFWEEMD---KRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
G M GK E W++ D K G+ D +Y+I ++ +C G +AVKL +M++KG
Sbjct: 435 G---MCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG 491
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
D + +N +I+ + + A+++ EMR P + LLC + +
Sbjct: 492 CLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSM---LLCLASFDPQWH 548
Query: 268 AVLAEMPKK-----GCVP 280
A L +P G VP
Sbjct: 549 AALVSLPNALQKGVGSVP 566
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Query: 242 GCQPSVVTCNTVIK-LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI-- 298
G +P VT T++K + ENG + +A + EM +KG D TY L K R+
Sbjct: 72 GFEPDAVTVTTLVKGVWMENG-IPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGL 130
Query: 299 -LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ L ++M + + + TY M++ + G ++ +M G PD Y++L+D
Sbjct: 131 AIKLHEKM-KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMD 189
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSA 382
L G L A ++ +EM +G+SA
Sbjct: 190 GLCRFGRLKEALEFFKEMEGRGISA 214
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 161/320 (50%), Gaps = 10/320 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQEL 123
PN T+ + + A V+ A + + E GLK V++ ++V+ +C+ + +A+++
Sbjct: 190 PNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKV 249
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F E G + YN ++ G+ K+ + + EM ++G++ D+ +++
Sbjct: 250 -FDEMVKEGLA-----PDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSL 303
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ +MCK+G +AV L +EM+++G++M+ + + +I +D A+ REMR+
Sbjct: 304 IHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRI 363
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLF- 302
QPSVV N +I C GR+ EA ++ EM KG PDV+TY K + F
Sbjct: 364 QPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQ 423
Query: 303 --DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+M+E+G+ P TY L+R L V++K M LG PDE Y +L+D
Sbjct: 424 LNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHC 483
Query: 361 DKGMLDMARKYDEEMFAKGL 380
+G ++ A +EM G+
Sbjct: 484 KEGNVERALSLHDEMVKAGV 503
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 118/237 (49%), Gaps = 10/237 (4%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN +L S R F++ M GV ++++Y+I + +C G +A+ + ++M+
Sbjct: 126 YNAVLLALSDASLPSA-RRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMR 184
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
G + V YNT++ A + VD A R+ MRE G +P++VT N+V+ +C+ GR+
Sbjct: 185 GAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRME 244
Query: 265 EAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPKMDTYV 318
+A V EM K+G PD ++Y +C C E L +F M GI P + T+
Sbjct: 245 DARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGC---SHEALSVFAEMTRKGIMPDVVTFT 301
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
L+ + G L + ++M E G +E + AL+D KG LD A EM
Sbjct: 302 SLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREM 358
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 159/357 (44%), Gaps = 39/357 (10%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+P+ TF + A + A+G ++ E GL+ +E+++ L+D C+ + +A
Sbjct: 294 MPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDA-- 351
Query: 123 LCFGENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
+ EM + +I YN ++ G+ + + RE EM+ +GV D
Sbjct: 352 ----------LLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPD 401
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
+ +YS + CK+G A +L ++M + G+ D + Y+++IR + + + A +++
Sbjct: 402 VVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFK 461
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP- 295
M +G QP VT ++I C+ G V A ++ EM K G +PDV+TY L K
Sbjct: 462 NMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSA 521
Query: 296 ------REILGL-----------FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWK 338
R + L +D ++ ++ + + LL+ F G + V++
Sbjct: 522 RTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQ 581
Query: 339 KMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+ + + D Y+ L+ +G + A + ++M G + P L++G
Sbjct: 582 SILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFA--PNSTSTISLIRG 636
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 10/215 (4%)
Query: 172 GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFA 231
G + +Y+ + + + P A + + M G+ +V YN ++RA+ A
Sbjct: 118 GYAPSVLAYNAVLLALSDASLP-SARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH----- 286
+ V R+MR GC P+ VT NT++ C G V A ++ M + G P+++T++
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236
Query: 287 -CFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
C +E R++ FD M++ G+ P +Y L+ + + G V+ +M G
Sbjct: 237 ICKAGRMEDARKV---FDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGI 293
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
PD + +L+ + G L+ A EM +GL
Sbjct: 294 MPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGL 328
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 49/121 (40%), Gaps = 4/121 (3%)
Query: 277 GCVPDVITYHCFFRCLEKPR--EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
G P V+ Y+ L FD M+ G+ P + TY +L+R G +
Sbjct: 118 GYAPSVLAYNAVLLALSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL 177
Query: 335 VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQ 394
V + M GC P+ YN LV A G +D A + + M GL KP +V
Sbjct: 178 SVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGL--KPNLVTFNSVVN 235
Query: 395 G 395
G
Sbjct: 236 G 236
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%), Gaps = 10/226 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ + + V A+ +++ + G L D V+Y L++ L + EAQ L
Sbjct: 470 PDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRL 529
Query: 124 CF------GENKNVGFSGLVEMNKT---KIYNMILRGWFKMSWWGKCREFWEEMDKRGVV 174
F N+ + L+ + K +L+G+ + + ++ + R
Sbjct: 530 LFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWN 589
Query: 175 KDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRV 234
D YS+ + C+ G KA+ +K+M + G + + ++IR + V A +V
Sbjct: 590 LDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQV 649
Query: 235 YREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVP 280
+++ +I L + G V VL M + G +P
Sbjct: 650 IQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLP 695
>gi|15228767|ref|NP_191806.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181319|sp|Q9LZP3.1|PP293_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g62470, mitochondrial; Flags: Precursor
gi|7340718|emb|CAB82961.1| putative protein [Arabidopsis thaliana]
gi|34365579|gb|AAQ65101.1| At3g62470 [Arabidopsis thaliana]
gi|332646835|gb|AEE80356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 179/385 (46%), Gaps = 17/385 (4%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E L + + K A FF W F H + TYNS++ IL K +F+ +++ M
Sbjct: 166 EVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM--GT 223
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
+ TF I K + A +A+G F + ++ K V N L+D+L K EA
Sbjct: 224 KGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEA 283
Query: 121 QELCFGENKNVGFSGLVEMNKTKI--YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
Q L F L E + Y ++L GW ++ + W +M +G+ D+
Sbjct: 284 QVL---------FDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIV 334
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
++++ ++ + +S K A+KL+ MK KG +V +Y +IR ++ A+ + +M
Sbjct: 335 AHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 394
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---P 295
+ G QP +I ++ Y +L EM +KG PD TY+ + + P
Sbjct: 395 VDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP 454
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
++++MI++ I P + T+ M+++ + VW++M + G PD+ +Y L
Sbjct: 455 EHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVL 514
Query: 356 VDALIDKGMLDMARKYDEEMFAKGL 380
+ LI +G A +Y EEM KG+
Sbjct: 515 IRGLIGEGKSREACRYLEEMLDKGM 539
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 134/311 (43%), Gaps = 33/311 (10%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A + K+A+ F ++ F +T N ++D LG+ + L ++K+ + PN
Sbjct: 242 AKERKKAVGIFELMKK-YKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFT--PNM 298
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYK---------HV 117
T+ ++ + + EA +N + + GLK D V++ +++ L + HV
Sbjct: 299 MTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHV 358
Query: 118 IEAQELC------------FGENKNVG-----FSGLVEMN---KTKIYNMILRGWFKMSW 157
++++ C F + ++ F +V+ +Y ++ G+
Sbjct: 359 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKK 418
Query: 158 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
E +EM ++G D +Y+ + +M P A ++Y +M + I+ + +N
Sbjct: 419 LDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNM 478
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
++++ ++ + V+ EM + G P + +I+ L G+ REA L EM KG
Sbjct: 479 IMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKG 538
Query: 278 CVPDVITYHCF 288
+I Y+ F
Sbjct: 539 MKTPLIDYNKF 549
>gi|226509960|ref|NP_001150456.1| LOC100284086 [Zea mays]
gi|195639404|gb|ACG39170.1| ATP binding protein [Zea mays]
Length = 634
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 176/377 (46%), Gaps = 16/377 (4%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
+ + FF W FTHTT TY ++ ILGK +F+ +I M + + F+
Sbjct: 209 RPSYRFFRWATVSGGFTHTTITYCKMLHILGKTRQFESMVAMIQEMGK--AGALSMDAFK 266
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKN 130
+ K + A + A+G F + + G D V N L+ AL + EA+++ F +
Sbjct: 267 VAIKSFAAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALAKEGLGREARQV-FDKMHG 325
Query: 131 VGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS 190
L + Y ++ W + W EM ++G+ D+ ++ ++ + +
Sbjct: 326 QYSPDL------RSYTALMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRG 379
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTC 250
+ +AVK+++ MK KG +V Y +IR +D AM + EM+E CQP V T
Sbjct: 380 QRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATY 439
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIE 307
++ ++ AVL EM +KGC PD TY+ + L P + ++ +MI+
Sbjct: 440 TCLLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIK 499
Query: 308 SGIRPKMDTYVMLLRKF--GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
G+ P + TY M+++ + G + VW++M + G PD +Y ++ I G
Sbjct: 500 KGLEPTIHTYNMMMKSYFVGDSNYAMGC-AVWEEMHQRGICPDVNSYTVFINRHIRHGRP 558
Query: 366 DMARKYDEEMFAKGLSA 382
+ A KY EEM KG+ A
Sbjct: 559 EEAYKYIEEMINKGMKA 575
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 10/227 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
P+ M + + EA+ F + G V +Y L+ C+ + A E
Sbjct: 364 PDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKMDMAME- 422
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
CF E + V Y +L G+ + EEM ++G D +Y+
Sbjct: 423 CFEEMQEAKCQPDV-----ATYTCLLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNAL 477
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM--RVYREMREM 241
+ ++ P A ++YK+M KKG++ + YN ++++ V + ++AM V+ EM +
Sbjct: 478 IKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFVGDS-NYAMGCAVWEEMHQR 536
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
G P V + I +GR EAY + EM KG I Y+ F
Sbjct: 537 GICPDVNSYTVFINRHIRHGRPEEAYKYIEEMINKGMKAPQIDYNKF 583
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 168/377 (44%), Gaps = 30/377 (7%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
AL FF + F HT TY ++I LG + D L+ MK S N F I+
Sbjct: 56 ALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISC-NEDLFVIV 114
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGF 133
Y A L +A+ TF ++ EFG K V Y HV++A ENK
Sbjct: 115 INAYRRAGLAEQALKTFYRIGEFGCKPSVKI---------YNHVLDA---LLSENKFQMI 162
Query: 134 SGL--------VEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
+G+ +E+N YNM+L+ K R+ EM +G + D SY+ +
Sbjct: 163 NGIYNNMKRDGIELN-VYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVS 221
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
MC+ GK +A +E+ + IK V YN +I ++ ++ EM G P
Sbjct: 222 SMCRLGKVEEA----RELSMR-IKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDP 276
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLF 302
V+T +TVI L E G V A AVLA+M +GC P+V T+ + + E L L+
Sbjct: 277 DVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLW 336
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
+RMI+ G P Y L+ +G + V +KME G P+E Y+ L+D
Sbjct: 337 NRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKA 396
Query: 363 GMLDMARKYDEEMFAKG 379
G L A + +M G
Sbjct: 397 GDLVGASEIWNKMITNG 413
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 185/398 (46%), Gaps = 21/398 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + + E FN + + TY++VI+ L + +++ ++ +M S P
Sbjct: 254 CREHKMEEVFELFNEMAVE-GIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCS-P 311
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N TF + K Y + EA+ +N++ + G + + V+Y L+ LC Y ++EA +
Sbjct: 312 NVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVS 371
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+N F N+T Y+ ++ G+ K E W +M G + ++ Y+ +
Sbjct: 372 QKMERNGVFP-----NETT-YSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMV 425
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D++C++ A+ L + M + + +NT I+ + S ++AM+V +MR+ GC
Sbjct: 426 DVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCA 485
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCLEKPREI 298
P+V T N V+ L R REA ++ E+ + +++TY+ C + +I
Sbjct: 486 PNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQI 545
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS-PDEFAYNALVD 357
G +++ G +P TY ++ + + G ++ + ++ + G PD F Y +L+
Sbjct: 546 AG---KLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLW 602
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+ + +D A + ++M +G+ P LV+G
Sbjct: 603 GVCNWIGVDEAVVHLDKMINEGIC--PNRATWNALVRG 638
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 111/234 (47%), Gaps = 8/234 (3%)
Query: 164 FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
+ M G+ + + I ++ ++G +A+K + + + G K V YN V+ A+
Sbjct: 95 LLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALL 154
Query: 224 VSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVI 283
+Y M+ G + +V T N ++K LC+N RV A +LAEM KGC+PD +
Sbjct: 155 SENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAV 214
Query: 284 TYHCFFRCLEKPREILGLFDRMIESGIRPK--MDTYVMLLRKFGRWGFLRPVFVVWKKME 341
+Y + + LG + E +R K + Y L+ F R + VF ++ +M
Sbjct: 215 SYTTVVSSMCR----LGKVEEARELSMRIKSFVPVYNALINGFCREHKMEEVFELFNEMA 270
Query: 342 ELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
G PD Y+ +++ L + G ++MA +MF +G S P T L++G
Sbjct: 271 VEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCS--PNVHTFTSLMKG 322
>gi|125560868|gb|EAZ06316.1| hypothetical protein OsI_28549 [Oryza sativa Indica Group]
Length = 326
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 148/289 (51%), Gaps = 9/289 (3%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFK-MSWW 158
D+ + +L+ ALC+ K++ +A+EL K + + +N+IL GW ++
Sbjct: 9 DQTVFYSLLRALCKNKNIEDAEELLLMRKKFFPLTA-------EGFNIILDGWCNVITDI 61
Query: 159 GKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTV 218
+ + W EM + D SY++ + K G + +++Y EMKK+G + YN++
Sbjct: 62 AEAKRIWREMSNYCITPDGTSYTLMVSCFAKVGNLFDTLRVYDEMKKRGWTPSIAVYNSL 121
Query: 219 IRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGC 278
I + + A ++ + + G QP+V T N++I LCE+ ++ EA VL +M KG
Sbjct: 122 IYVLTKENCMKDAQNIFTRIIDEGLQPNVKTYNSMIVPLCESRKLDEARMVLEDMMLKGI 181
Query: 279 VPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWK 338
VP ++TYH F R E E L L +M + G PK DT++ML+ +F + +W
Sbjct: 182 VPTILTYHTFLR-QENIDETLKLLKKMKDDGCGPKSDTFLMLIDRFFQLNEPGHALKLWN 240
Query: 339 KMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREE 387
+M+ P Y ++V LI G ++ A +Y +EM G ++ P+ E
Sbjct: 241 EMKRYDIRPSYSHYMSVVQGLIKHGCMERALEYYDEMKENGFASDPKLE 289
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 183/386 (47%), Gaps = 49/386 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRM--KDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
+YN+V+ L + D + L+ M + +P+ PN ++ ++ + L ++A+G
Sbjct: 79 SYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLL 138
Query: 91 NKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+ G++ D V+Y L+ LC+ V +A EL GE G +E N +Y+ +L
Sbjct: 139 RSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL-MGEMCESG----IEPNVV-VYSSLL 192
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
+G+ K W + + EM ++G+ D+ Y+ +D +CK GK KA + M ++G++
Sbjct: 193 QGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLE 252
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT----------------- 252
+VV YN +I + V A+ V ++M E G P VVT NT
Sbjct: 253 PNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWL 312
Query: 253 --------------------VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
VI+ LC+ GR+R+A+ V A M + GC+ +++TY+ L
Sbjct: 313 LEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGL 372
Query: 293 ---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE 349
K R+ + L D M G+ P TY +L++ F + + + M + G P+
Sbjct: 373 LRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPEL 432
Query: 350 FAYNALVDALIDKGMLDMARKYDEEM 375
F Y L+ A+ ++GM++ AR EM
Sbjct: 433 FHYIPLLVAMCEQGMMERARNLFNEM 458
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 113/223 (50%), Gaps = 3/223 (1%)
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
SY++ M +C +AV L + M+ G++ DVV Y T+IR + + VD A+ + EM
Sbjct: 117 SYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEM 176
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKP 295
E G +P+VV +++++ C++GR + V EM +KG PDV+ Y L K
Sbjct: 177 CESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKA 236
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
++ G+ D M+ G+ P + TY +L+ + G ++ V KKM E G +PD YN L
Sbjct: 237 KKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTL 296
Query: 356 VDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLD 398
+ L D +D A EEM KP ++QG D
Sbjct: 297 IKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCD 339
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 150/339 (44%), Gaps = 19/339 (5%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA--- 120
PN T+ ++ V EA+G K+ E G+ D V+Y L+ L + + EA
Sbjct: 253 PNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWL 312
Query: 121 -QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
+E+ G+N +V+ N +N +++G + + + M++ G + +L +
Sbjct: 313 LEEMVRGKN-------IVKPNVVT-FNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVT 364
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y++ + + + K KA++L EM G++ D Y+ +I+ VD A + MR
Sbjct: 365 YNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMR 424
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL 299
+ G +P + ++ +CE G + A + EM + DV+ Y K ++
Sbjct: 425 DRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPL-DVVAYSTMIHGACKAGDLK 483
Query: 300 G---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
L +++ G+ P TY +++ F + G + V K+M G PD +++L+
Sbjct: 484 TAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLI 543
Query: 357 DALIDKGMLDMARKYDEEMFAK--GLSAKPREELGTKLV 393
KG ++ + EM K L +K L T LV
Sbjct: 544 QGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLV 582
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 12/283 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI-PNHATFRIMFKRYVTAHLVNEAMGTFN 91
TYN++I L E D + L+ M + + PN TF + + + +A
Sbjct: 292 TYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRA 351
Query: 92 KLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
++E G + + V+Y L+ L V +A EL E ++G + Y+++++
Sbjct: 352 MMEETGCMVNLVTYNLLIGGLLRVHKVRKAMEL-MDEMTSLGLE-----PDSFTYSILIK 405
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
G+ KM + + M RG+ +L Y + MC+ G +A L+ EM +
Sbjct: 406 GFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNN-FPL 464
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
DVVAY+T+I + + A + + + + G P VT + VI + ++G + A VL
Sbjct: 465 DVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVL 524
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGI 310
+M G +PDV + + EI L L MI I
Sbjct: 525 KQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNI 567
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 109/252 (43%), Gaps = 13/252 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+NSVI L ++ + M + + N T+ ++ + H V +AM ++
Sbjct: 329 TFNSVIQGLCDIGRMRQAFQ-VRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDE 387
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI--L 149
+ GL+ D +Y L+ C+ V A++L ++ G + ++++ I L
Sbjct: 388 MTSLGLEPDSFTYSILIKGFCKMWQVDRAEDL-LSTMRDRGI-------EPELFHYIPLL 439
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
+ + R + EMD + D+ +YS + CK+G A +L K + +G+
Sbjct: 440 VAMCEQGMMERARNLFNEMDNNFPL-DVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLT 498
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
D V Y+ VI S ++ A V ++M G P V +++I+ G + + +
Sbjct: 499 PDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLEL 558
Query: 270 LAEMPKKGCVPD 281
+ EM K D
Sbjct: 559 IREMITKNIALD 570
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 69/183 (37%), Gaps = 50/183 (27%)
Query: 245 PSV---VTCNTVIKLLCENGRVREAYAVLAEM---PKKGCVPDVITYHCFFRCLEKPR-- 296
PSV V+ NTV+ LC G A A+L M P C P+ ++Y R L R
Sbjct: 72 PSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLA 131
Query: 297 -EILGLFDRMIESGIRPKMDTYVMLLR--------------------------------- 322
+ +GL M +G+R + TY L+R
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSL 191
Query: 323 -----KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
K GRW + VFV +M E G PD Y L+D+L G A + M
Sbjct: 192 LQGYCKSGRWEDVGKVFV---EMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVR 248
Query: 378 KGL 380
+GL
Sbjct: 249 RGL 251
>gi|147782978|emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera]
Length = 708
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 186/384 (48%), Gaps = 26/384 (6%)
Query: 12 KRALEFFNWV-ETDCHFTHTTDTYNSVIDILG----KFFEFDLSWNLIHRMKDN-PSSIP 65
K A FF W DC ++H YN +IDIL K +F + +++ MK N S+P
Sbjct: 254 KMAFRFFMWAGHQDC-YSHEPRAYNEMIDILSSTKYKVKQFRIVCDMLDYMKRNDKKSVP 312
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE---VSYCNLVDALCEYKHVIEAQE 122
I+ ++Y HL + + F K + +K + + L+DALC+ V +AQ
Sbjct: 313 VEVLLMIL-RKYTEKHLAH--LHKFAKKKKIRVKTQPEINALNLLLDALCKCSLVEDAQA 369
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ F KN YN++ GW ++ + EEM + G D +Y+
Sbjct: 370 M-FRRVKNK------VKPDANTYNILFFGWCRVRNPSRGMRVLEEMIEMGHTPDSFTYNT 422
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMD---VVAYNTVIRAVGVSEGVDFAMRVYREMR 239
+D CK+G +A +L++ M+ KG M Y +I A+ S+ + ++ ++M
Sbjct: 423 AIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEECFKLIKDMI 482
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPR 296
G P V T VI+ +C G+V EAY L EM KG PD++TY+CF L +K
Sbjct: 483 NSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENKKSE 542
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
E LGL+ RMIE+G P + T+ ML+ F G F W +M++ GC+ D Y ++
Sbjct: 543 EALGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVMI 602
Query: 357 DALIDKGMLDMARKYDEEMFAKGL 380
+ L + ++ A +E+ KG+
Sbjct: 603 EGLFNCNKMEDACFLLDEVINKGI 626
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 122/270 (45%), Gaps = 14/270 (5%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ I+F + + M ++ E G D +Y +D+ C+ V EA EL
Sbjct: 380 PDANTYNILFFGWCRVRNPSRGMRVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATEL 439
Query: 124 C-FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
F K S K Y +++ + +C + ++M GV+ D+ +Y
Sbjct: 440 FEFMRTKGSTMSSPT----AKTYAIMILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQ 495
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ MC +GK +A K +EM KG + D+V YN + + ++ + A+ +Y M E G
Sbjct: 496 VIEGMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENKKSEEALGLYGRMIEAG 555
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY----HCFFRCLEKPREI 298
C PSV T N +I + E G A+ EM K+GC D TY F C K +
Sbjct: 556 CVPSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVMIEGLFNC-NKMEDA 614
Query: 299 LGLFDRMIESGIR---PKMDTYVMLLRKFG 325
L D +I GI+ K D ++M L G
Sbjct: 615 CFLLDEVINKGIKLPYRKFDCFLMQLSMIG 644
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 16/211 (7%)
Query: 6 CYANDWKRALEFFNWVET--DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
C A A E F ++ T + T TY +I L + + + LI M N
Sbjct: 428 CKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEECFKLIKDMI-NSGV 486
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK----DEVSYCNLVDALCEYKHVIE 119
+P+ +T++ + + A V EA + L+E G K D V+Y +D LCE K E
Sbjct: 487 LPDVSTYKQVIEGMCLAGKVEEA---YKFLEEMGNKGYRPDIVTYNCFLDVLCENKKSEE 543
Query: 120 AQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
A L +G G V +NM++ +F++ E W EMDKRG +D +
Sbjct: 544 ALGL-YGRMIEAGCVPSVH-----TFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDT 597
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
Y + ++ + K A L E+ KGIK+
Sbjct: 598 YCVMIEGLFNCNKMEDACFLLDEVINKGIKL 628
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 183/386 (47%), Gaps = 49/386 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRM--KDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
+YN+V+ L + D + L+ M + +P+ PN ++ ++ + L ++A+G
Sbjct: 79 SYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLL 138
Query: 91 NKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+ G++ D V+Y L+ LC+ V +A EL GE G +E N +Y+ +L
Sbjct: 139 RSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL-MGEMCESG----IEPNVV-VYSSLL 192
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
+G+ K W + + EM ++G+ D+ Y+ +D +CK GK KA + M ++G++
Sbjct: 193 QGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLE 252
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT----------------- 252
+VV YN +I + V A+ V ++M E G P VVT NT
Sbjct: 253 PNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWL 312
Query: 253 --------------------VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
VI+ LC+ GR+R+A+ V A M + GC+ +++TY+ L
Sbjct: 313 LEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGL 372
Query: 293 ---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE 349
K R+ + L D M G+ P TY +L++ F + + + M + G P+
Sbjct: 373 LRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPEL 432
Query: 350 FAYNALVDALIDKGMLDMARKYDEEM 375
F Y L+ A+ ++GM++ AR EM
Sbjct: 433 FHYIPLLVAMCEQGMMERARNLFNEM 458
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 113/223 (50%), Gaps = 3/223 (1%)
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
SY++ M +C +AV L + M+ G++ DVV Y T+IR + + VD A+ + EM
Sbjct: 117 SYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEM 176
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKP 295
E G +P+VV +++++ C++GR + V EM +KG PDV+ Y L K
Sbjct: 177 CESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKA 236
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
++ G+ D M+ G+ P + TY +L+ + G ++ V KKM E G +PD YN L
Sbjct: 237 KKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTL 296
Query: 356 VDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLD 398
+ L D +D A EEM KP ++QG D
Sbjct: 297 IKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCD 339
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 150/339 (44%), Gaps = 19/339 (5%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA--- 120
PN T+ ++ V EA+G K+ E G+ D V+Y L+ L + + EA
Sbjct: 253 PNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWL 312
Query: 121 -QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
+E+ G+N +V+ N +N +++G + + + M++ G + +L +
Sbjct: 313 LEEMVRGKN-------IVKPNVVT-FNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVT 364
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y++ + + + K KA++L EM G++ D Y+ +I+ VD A + MR
Sbjct: 365 YNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMR 424
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL 299
+ G +P + ++ +CE G + A + EM + DV+ Y K ++
Sbjct: 425 DRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPL-DVVAYSTMIHGACKAGDLK 483
Query: 300 G---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
L +++ G+ P TY +++ F + G + V K+M G PD +++L+
Sbjct: 484 TAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLI 543
Query: 357 DALIDKGMLDMARKYDEEMFAK--GLSAKPREELGTKLV 393
KG ++ + EM K L +K L T LV
Sbjct: 544 QGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLV 582
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 12/283 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI-PNHATFRIMFKRYVTAHLVNEAMGTFN 91
TYN++I L E D + L+ M + + PN TF + + + +A
Sbjct: 292 TYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRA 351
Query: 92 KLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
++E G + + V+Y L+ L V +A EL E ++G + Y+++++
Sbjct: 352 MMEETGCMVNLVTYNLLIGGLLRVHKVRKAMEL-MDEMTSLGLE-----PDSFTYSILIK 405
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
G+ KM + + M RG+ +L Y + MC+ G +A L+ EM +
Sbjct: 406 GFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNN-FPL 464
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
DVVAY+T+I + + A + + + + G P VT + VI + ++G + A VL
Sbjct: 465 DVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVL 524
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGI 310
+M G +PDV + + EI L L MI I
Sbjct: 525 KQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNI 567
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 109/252 (43%), Gaps = 13/252 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+NSVI L ++ + M + + N T+ ++ + H V +AM ++
Sbjct: 329 TFNSVIQGLCDIGRMRQAFQ-VRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDE 387
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI--L 149
+ GL+ D +Y L+ C+ V A++L ++ G + ++++ I L
Sbjct: 388 MTSLGLEPDSFTYSILIKGFCKMWQVDRAEDL-LSTMRDRGI-------EPELFHYIPLL 439
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
+ + R + EMD + D+ +YS + CK+G A +L K + +G+
Sbjct: 440 VAMCEQGMMERARNLFNEMDNNFPL-DVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLT 498
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
D V Y+ VI S ++ A V ++M G P V +++I+ G + + +
Sbjct: 499 PDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLEL 558
Query: 270 LAEMPKKGCVPD 281
+ EM K D
Sbjct: 559 IREMITKNIALD 570
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 69/183 (37%), Gaps = 50/183 (27%)
Query: 245 PSV---VTCNTVIKLLCENGRVREAYAVLAEM---PKKGCVPDVITYHCFFRCLEKPR-- 296
PSV V+ NTV+ LC G A A+L M P C P+ ++Y R L R
Sbjct: 72 PSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLA 131
Query: 297 -EILGLFDRMIESGIRPKMDTYVMLLR--------------------------------- 322
+ +GL M +G+R + TY L+R
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSL 191
Query: 323 -----KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
K GRW + VFV +M E G PD Y L+D+L G A + M
Sbjct: 192 LQGYCKSGRWEDVGKVFV---EMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVR 248
Query: 378 KGL 380
+GL
Sbjct: 249 RGL 251
>gi|224093900|ref|XP_002310039.1| predicted protein [Populus trichocarpa]
gi|222852942|gb|EEE90489.1| predicted protein [Populus trichocarpa]
Length = 507
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 181/371 (48%), Gaps = 14/371 (3%)
Query: 13 RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
+AL+FFN+ F H++ + ++++ ILG+ +FD W+++ +K ++ T ++
Sbjct: 91 QALDFFNFTADRRGFYHSSYSLDTMLYILGRSRKFDHIWDVLIDIKRKDRNLITPRTLQV 150
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEF-GLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNV 131
+ R V + +F K + D + L+ LC+ K + +A+ + K
Sbjct: 151 VLGRVAKVCSVRMTVESFWKFKRLVPVFDTSCFNALLRTLCQEKSMSDARNVYHHLKK-- 208
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
GF + +N++L GW K S + F+EEM + GV D+ +Y+ +D+ CK
Sbjct: 209 GFRP-----NLQTFNILLSGW-KSSEEAEL--FYEEMKELGVKPDIVTYNSLIDVFCKGR 260
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
+ KA + M+++ I DV+ Y ++I +G+ D A + +EM+E GC P V N
Sbjct: 261 ELEKAYGVVARMREEDILPDVITYTSIIGGLGLVGQPDKARDMLKEMKEHGCYPDVAAYN 320
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFD---RMIES 308
VI+ C R+ AY+++AEM KG P+ +Y+ FFR ++ +D RM+++
Sbjct: 321 AVIRNYCIAKRLDAAYSLMAEMESKGMSPNATSYNLFFRVFSWSNDLRNSWDFYGRMMDA 380
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G P + + L++ F R + +W M E G + L+ L D G L A
Sbjct: 381 GCLPNTQSCMFLIKLFKRHEKVEMALQLWNDMVEKGFGSYILVSDVLLGMLCDMGKLVEA 440
Query: 369 RKYDEEMFAKG 379
K +M KG
Sbjct: 441 EKCFLQMVEKG 451
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 81/174 (46%), Gaps = 7/174 (4%)
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
D +N ++R + + + A VY +++ G +P++ T N LL EA
Sbjct: 179 DTSCFNALLRTLCQEKSMSDARNVYHHLKK-GFRPNLQTFNI---LLSGWKSSEEAELFY 234
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
EM + G PD++TY+ K RE+ G+ RM E I P + TY ++ G
Sbjct: 235 EEMKELGVKPDIVTYNSLIDVFCKGRELEKAYGVVARMREEDILPDVITYTSIIGGLGLV 294
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G + K+M+E GC PD AYNA++ LD A EM +KG+S
Sbjct: 295 GQPDKARDMLKEMKEHGCYPDVAAYNAVIRNYCIAKRLDAAYSLMAEMESKGMS 348
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 118/291 (40%), Gaps = 47/291 (16%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T +N+++ L + + N+ H +K PN TF I+ + ++ EA +
Sbjct: 180 TSCFNALLRTLCQEKSMSDARNVYHHLKKGFR--PNLQTFNILLSGWKSSE---EAELFY 234
Query: 91 NKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
++ E G+K D V+Y +L+D C+ + + +A + + ++ Y I+
Sbjct: 235 EEMKELGVKPDIVTYNSLIDVFCKGRELEKAYGVVARMREEDILPDVI------TYTSII 288
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G + K R+ +EM + G D+ +Y+ + C + + A L EM+ KG+
Sbjct: 289 GGLGLVGQPDKARDMLKEMKEHGCYPDVAAYNAVIRNYCIAKRLDAAYSLMAEMESKGMS 348
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKL------------- 256
+ +YN R S + + Y M + GC P+ +C +IKL
Sbjct: 349 PNATSYNLFFRVFSWSNDLRNSWDFYGRMMDAGCLPNTQSCMFLIKLFKRHEKVEMALQL 408
Query: 257 ----------------------LCENGRVREAYAVLAEMPKKGCVPDVITY 285
LC+ G++ EA +M +KG P +++
Sbjct: 409 WNDMVEKGFGSYILVSDVLLGMLCDMGKLVEAEKCFLQMVEKGHKPSNVSF 459
>gi|225427504|ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Vitis vinifera]
Length = 709
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 186/384 (48%), Gaps = 26/384 (6%)
Query: 12 KRALEFFNWV-ETDCHFTHTTDTYNSVIDILG----KFFEFDLSWNLIHRMKDN-PSSIP 65
K A FF W DC ++H YN +IDIL K +F + +++ MK N S+P
Sbjct: 281 KMAFRFFMWAGHQDC-YSHEPRAYNEMIDILSSTKYKVKQFRIVCDMLDYMKRNDKKSVP 339
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE---VSYCNLVDALCEYKHVIEAQE 122
I+ ++Y HL + + F K + +K + + L+DALC+ V +AQ
Sbjct: 340 VEVLLMIL-RKYTEKHLAH--LHKFAKKKKIRVKTQPEINALNLLLDALCKCSLVEDAQA 396
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ F KN YN++ GW ++ + EEM + G D +Y+
Sbjct: 397 M-FRRVKNK------VKPDANTYNILFFGWCRVRNPSRGMRVLEEMIEMGHTPDSFTYNT 449
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMD---VVAYNTVIRAVGVSEGVDFAMRVYREMR 239
+D CK+G +A +L++ M+ KG M Y +I A+ S+ + ++ ++M
Sbjct: 450 AIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEECFKLIKDMI 509
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPR 296
G P V T VI+ +C G+V EAY L EM KG PD++TY+CF L +K
Sbjct: 510 NSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENKKSE 569
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
E LGL+ RMIE+G P + T+ ML+ F G F W +M++ GC+ D Y ++
Sbjct: 570 EALGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVMI 629
Query: 357 DALIDKGMLDMARKYDEEMFAKGL 380
+ L + ++ A +E+ KG+
Sbjct: 630 EGLFNCNKMEDACFLLDEVVNKGI 653
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 14/270 (5%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ I+F + + M ++ E G D +Y +D+ C+ V EA EL
Sbjct: 407 PDANTYNILFFGWCRVRNPSRGMRVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATEL 466
Query: 124 C-FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
F K S K Y +++ + +C + ++M GV+ D+ +Y
Sbjct: 467 FEFMRTKGSTMSSPT----AKTYAIMILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQ 522
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ MC +GK +A K +EM KG + D+V YN + + ++ + A+ +Y M E G
Sbjct: 523 VIEGMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENKKSEEALGLYGRMIEAG 582
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY----HCFFRCLEKPREI 298
C PSV T N +I + E G A+ EM K+GC D TY F C K +
Sbjct: 583 CVPSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVMIEGLFNC-NKMEDA 641
Query: 299 LGLFDRMIESGIR---PKMDTYVMLLRKFG 325
L D ++ GI+ K D ++M L G
Sbjct: 642 CFLLDEVVNKGIKLPYRKFDCFLMQLSMIG 671
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 16/211 (7%)
Query: 6 CYANDWKRALEFFNWVET--DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
C A A E F ++ T + T TY +I L + + + LI M N
Sbjct: 455 CKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEECFKLIKDMI-NSGV 513
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK----DEVSYCNLVDALCEYKHVIE 119
+P+ +T++ + + A V EA + L+E G K D V+Y +D LCE K E
Sbjct: 514 LPDVSTYKQVIEGMCLAGKVEEA---YKFLEEMGNKGYRPDIVTYNCFLDVLCENKKSEE 570
Query: 120 AQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
A L +G G V +NM++ +F++ E W EMDKRG +D +
Sbjct: 571 ALGL-YGRMIEAGCVPSVH-----TFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDT 624
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
Y + ++ + K A L E+ KGIK+
Sbjct: 625 YCVMIEGLFNCNKMEDACFLLDEVVNKGIKL 655
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 180/375 (48%), Gaps = 14/375 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + + + AL +F+ ++ TH T +N ++ L K + + + +M + P
Sbjct: 231 CASGNLEDALAYFDELDDSLDLTHFT--FNPLVAALCKAERTEEAIAFVKKMSER-RCFP 287
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELC 124
T+ + ++ ++EA+ + E G + D V+Y +++D LC+ V E E
Sbjct: 288 TLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER- 346
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F E +N G+ Y ++ G+ K K + +M + G V +Y+I +
Sbjct: 347 FHEMRNRGYE-----PDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIIL 401
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D +CK+G+ +A + M+++G VV Y+ ++ V A+ ++R M + GC+
Sbjct: 402 DGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCE 461
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---- 300
P++V+ N +I+ LC G++ +AY ++ ++ PDV T++ F L + + +G
Sbjct: 462 PNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVE 521
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
LF+ M+ G P + +Y +L+ R G L ++ +M G +PD +N L+ L
Sbjct: 522 LFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLC 581
Query: 361 DKGMLDMARKYDEEM 375
G +D A + E+
Sbjct: 582 IAGRVDEALEVFREL 596
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 161/336 (47%), Gaps = 12/336 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI---PNHATFRIMFKRYVTAHLVNEAMGT 89
Y ++I L K + D + +++M +N + P+ ++ ++ + + +A+
Sbjct: 183 VYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAY 242
Query: 90 FNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
F++LD+ ++ LV ALC+ + EA ++ F L Y ++
Sbjct: 243 FDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLF------TYTSLV 296
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G+ K+ + +E +RG + D +Y+ +D +CK G+ + + + EM+ +G +
Sbjct: 297 DGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYE 356
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
D V Y +I ++ + A RVYR+M + G S VT N ++ LC+ GRV EAYA
Sbjct: 357 PDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYAT 416
Query: 270 LAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
M ++GCV V+TY C E + LF RM++ G P + +Y +++R R
Sbjct: 417 FLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCR 476
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
G L + ++K+ + PD + +N+ + L +
Sbjct: 477 AGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQR 512
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 6/207 (2%)
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
D + ++ +CK+G+ +A+ L EM D+VA+ VI + + +D A V
Sbjct: 8 DTRVCTALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVL 64
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP 295
GC+P VT N I LC+ RV +A+ +L +M +K C+P +TY L K
Sbjct: 65 ERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKA 124
Query: 296 ---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
E + + ++M+E G P + TY +++ + G + ++ M GC PD F Y
Sbjct: 125 GRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVY 184
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKG 379
AL+ L G LD A Y +M G
Sbjct: 185 TALISGLAKIGKLDEALVYLNQMVENG 211
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 154/359 (42%), Gaps = 23/359 (6%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T ++++ L K + D + L+ M P S P+ F ++ ++EA
Sbjct: 9 TRVCTALLNGLCKTGQLDRAMLLLDEM---PCS-PDMVAFTVVINGLCREKRLDEAFSVL 64
Query: 91 NKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC--FGENKNVGFSGLVEMNKTKIYNM 147
+ G + D V+Y +D LC+ + V +A +L E K + T Y
Sbjct: 65 ERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKC--------LPTTVTYTA 116
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++ G K + E+M ++G L +Y++ +D + K+G+ +A +++ +M G
Sbjct: 117 LVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNG 176
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC----QPSVVTCNTVIKLLCENGRV 263
+ D Y +I + +D A+ +M E GC +P VV N VI+ LC +G +
Sbjct: 177 CRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNL 236
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVML 320
+A A E+ + T++ L E+ E + +M E P + TY L
Sbjct: 237 EDALAYFDELDDSLDLTH-FTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSL 295
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ F + G L + K+ E G PD Y +++D L G ++ + EM +G
Sbjct: 296 VDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRG 354
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 165/409 (40%), Gaps = 45/409 (11%)
Query: 12 KRALEFFNWVETDCHFTHTTD--TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
KR E F+ +E D TYN ID L K D ++ L+ +M D +P T
Sbjct: 55 KRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKM-DEKKCLPTTVT 113
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGEN 128
+ + + A ++EAM ++ E G + +Y ++D L + V EA+ +
Sbjct: 114 YTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDML 173
Query: 129 KN----------VGFSGLVEMNKTK-----------------------IYNMILRGWFKM 155
N SGL ++ K I+N+++R
Sbjct: 174 GNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCAS 233
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSI--YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
+++E+D DL ++ + +CK+ + +A+ K+M ++ +
Sbjct: 234 GNLEDALAYFDELDDS---LDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLF 290
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
Y +++ +D A+ +E E G P VT ++I LC+ GRV E EM
Sbjct: 291 TYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEM 350
Query: 274 PKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
+G PD +TY K + I ++ +M++SG TY ++L + G +
Sbjct: 351 RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRV 410
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ + MEE GC Y+AL+D +G + A + M +G
Sbjct: 411 AEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRG 459
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 118/243 (48%), Gaps = 9/243 (3%)
Query: 54 IHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALC 112
++R ++ + T+ I+ A V EA TF ++E G + V+Y L+D C
Sbjct: 381 VYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFC 440
Query: 113 EYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRG 172
+V A EL F + G E N YN+I+RG + K ++E++ +R
Sbjct: 441 SEGNVSAAVEL-FRRMLDRG----CEPNLVS-YNIIIRGLCRAGKLAKAYFYFEKLLQRR 494
Query: 173 VVKDLHSYSIYMDIMCKS-GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFA 231
+ D+++++ ++ +C+ V+L++ M +G ++ +Y+ ++ + + G++
Sbjct: 495 LCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVT 554
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC 291
+ ++ EM G P VV NT+I+ LC GRV EA V E+ ++ PD +Y
Sbjct: 555 LEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDA 613
Query: 292 LEK 294
L +
Sbjct: 614 LSR 616
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKP-REILGLFDRM 305
C ++ LC+ G++ A +L EMP C PD++ + C EK E + +R
Sbjct: 11 VCTALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVLERA 67
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
+ +G P TY + + + + F + KKM+E C P Y ALVD L+ G L
Sbjct: 68 VRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRL 127
Query: 366 DMARKYDEEMFAKGLS 381
D A E+M KG S
Sbjct: 128 DEAMAILEQMVEKGNS 143
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 177/366 (48%), Gaps = 13/366 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N++I+ L K +F + + + P T+ + A G F K
Sbjct: 167 TFNTLINGLCKVGKFAQAVEFFDDFEASGCQ-PTVYTYTTIINGLCKIGETTAAAGLFKK 225
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
++E G + + V+Y L+D+LC+ K V EA ++ F K S + YN +++G
Sbjct: 226 MEEAGCQPNVVTYNILIDSLCKDKLVNEALDI-FSYMKAKRISPDI-----FTYNSLIQG 279
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
W + EM ++ ++ ++++ +D +CK GK +A ++K M + G++ D
Sbjct: 280 LCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPD 339
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
VV Y++++ + + A +++ M GC+P + N +IK C+ R+ EA +
Sbjct: 340 VVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFN 399
Query: 272 EMPKKGCVPDVITYHCFFR--C-LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM +G PD + Y+ C L + RE LF M +G P + TY MLL F + G
Sbjct: 400 EMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEG 459
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREEL 388
+L F +++ M+ PD YN L+DA+ G L ARK E+F +GL P ++
Sbjct: 460 YLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGL--LPNVQI 517
Query: 389 GTKLVQ 394
T ++
Sbjct: 518 YTTIIN 523
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 180/418 (43%), Gaps = 49/418 (11%)
Query: 6 CYANDWKRALEFFNWVE-TDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C + +A+EFF+ E + C T TY ++I+ L K E + L +M++
Sbjct: 176 CKVGKFAQAVEFFDDFEASGCQ--PTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQ- 232
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
PN T+ I+ LVNEA+ F+ + + ++ +Y +L+ LC ++ EA L
Sbjct: 233 PNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASAL 292
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
N+ + L M +N+++ K + + ++ M + GV D+ +YS
Sbjct: 293 L---NE---MTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSL 346
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
M + +A KL+ M KG K D +YN +I+ ++ +D A +++ EM G
Sbjct: 347 MYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGL 406
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF--------------- 288
P V NT+I LC+ GR+REA + M G +PD+ TY
Sbjct: 407 TPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFR 466
Query: 289 -FRCLE----KP------------------REILGLFDRMIESGIRPKMDTYVMLLRKFG 325
FR ++ KP ++ LF + G+ P + Y ++
Sbjct: 467 LFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLC 526
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAK 383
+ G L ++ ME GC PDEF+YN ++ + A + EM +G A+
Sbjct: 527 KEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAE 584
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 149/340 (43%), Gaps = 58/340 (17%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQEL------------------------------------ 123
D S+ N+ DAL + H++ + L
Sbjct: 68 DASSFRNIDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLS 127
Query: 124 -----------CFGENKNV--GFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREF 164
CF + V FS +M K + +N ++ G K+ + + EF
Sbjct: 128 PDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEF 187
Query: 165 WEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGV 224
+++ + G +++Y+ ++ +CK G+ A L+K+M++ G + +VV YN +I ++
Sbjct: 188 FDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCK 247
Query: 225 SEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
+ V+ A+ ++ M+ P + T N++I+ LC R +EA A+L EM +P++ T
Sbjct: 248 DKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFT 307
Query: 285 YHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKME 341
++ C E K E G+F M E G+ P + TY L+ + + ++ M
Sbjct: 308 FNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMI 367
Query: 342 ELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
GC PD F+YN L+ +D A++ EM +GL+
Sbjct: 368 TKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLT 407
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 7/221 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ ++ I+ K Y A ++EA FN++ GL D V+Y L+ LC+ + EAQ+L
Sbjct: 373 PDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDL 432
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ N L Y+M+L G+ K + GK + M + D+ Y+I
Sbjct: 433 FKNMHSNGNLPDLFT------YSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNIL 486
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D MCK G A KL+ E+ +G+ +V Y T+I + +D A+ +R M GC
Sbjct: 487 IDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGC 546
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
P + N +I+ + A ++ EM +G V + T
Sbjct: 547 PPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGT 587
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 60/137 (43%), Gaps = 6/137 (4%)
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE----ILGLFDRMIESGIRPKMDTYV 318
+ +A A M + +P +I + + K + ++ L +M +G+ P + T
Sbjct: 75 IDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLS 134
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+L+ F + F V+ KM +LG PD +N L++ L G A ++ ++ A
Sbjct: 135 ILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEAS 194
Query: 379 GLSAKPREELGTKLVQG 395
G +P T ++ G
Sbjct: 195 G--CQPTVYTYTTIING 209
>gi|224107981|ref|XP_002314676.1| predicted protein [Populus trichocarpa]
gi|222863716|gb|EEF00847.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 182/386 (47%), Gaps = 18/386 (4%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+ L ++N W AL F W + + H + YNS+IDILGK +F L W+L+ M
Sbjct: 142 QLLKRFSNQWLIALGVFIWAKNQTGYVHKPEIYNSMIDILGKSRKFSLMWDLVQEM---- 197
Query: 62 SSIPNHATFRIM---FKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHV 117
S + + + M KR V NEA+ F L++FGL N L+D L V
Sbjct: 198 SGLNGYVSLVTMGKVMKRLVRDGKYNEAIDAFRGLEKFGLSKSTEAMNVLMDILARNGRV 257
Query: 118 IEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
+A+ + + F G + ++ + YN++ G+ K +G R+ EEM++RG ++
Sbjct: 258 EDARAVA------LEFEGCLTLD-YRSYNILSSGYCKARMFGDARKTMEEMEERGFHPNV 310
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
SY+ +++ + + EM++KG D++ Y IRA+G + ++ A+ + E
Sbjct: 311 VSYTAFIEAYGEQKDFRNVEIILNEMQEKGCPPDLITYTVYIRALGKARQINKALEICEE 370
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR---CLEK 294
++ G ++I LC +GR+++A+ + ++ K+G D+ Y L +
Sbjct: 371 IKRNGFVLGTQFYCSLIHSLCLSGRLKDAWNIFEDVEKQGVGRDLGMYKAMISAACALSQ 430
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
L L +M E +P + TY LL+ R ++ + + M E S D Y+
Sbjct: 431 DESALKLLHKMEEDSCKPDVQTYAPLLKMCCRKKSMKMLKFLLNHMFENDVSIDIVTYDL 490
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGL 380
LV L +G L A + +E KG+
Sbjct: 491 LVHGLRKQGKLKYACFFFQEAVLKGM 516
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 134/333 (40%), Gaps = 39/333 (11%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGK----------FFEFDLSWNLIHRM 57
A D R LE F + +T+ N ++DIL + EF+ L +R
Sbjct: 225 AIDAFRGLEKFG-------LSKSTEAMNVLMDILARNGRVEDARAVALEFEGCLTLDYR- 276
Query: 58 KDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKH 116
++ I+ Y A + +A T +++E G + VSY ++A E K
Sbjct: 277 -----------SYNILSSGYCKARMFGDARKTMEEMEERGFHPNVVSYTAFIEAYGEQKD 325
Query: 117 VIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
E+ E + G Y + +R K K E EE+ + G V
Sbjct: 326 FRNV-EIILNEMQEKGCPP-----DLITYTVYIRALGKARQINKALEICEEIKRNGFVLG 379
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
Y + +C SG+ A ++++++K+G+ D+ Y +I A + A+++
Sbjct: 380 TQFYCSLIHSLCLSGRLKDAWNIFEDVEKQGVGRDLGMYKAMISAACALSQDESALKLLH 439
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR 296
+M E C+P V T ++K+ C ++ +L M + D++TY L K
Sbjct: 440 KMEEDSCKPDVQTYAPLLKMCCRKKSMKMLKFLLNHMFENDVSIDIVTYDLLVHGLRKQG 499
Query: 297 EI---LGLFDRMIESGIRPKMDTYVMLLRKFGR 326
++ F + G+ P TY +LL + R
Sbjct: 500 KLKYACFFFQEAVLKGMVPCDKTYKILLEELER 532
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 165/348 (47%), Gaps = 14/348 (4%)
Query: 38 IDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG 97
+DI F F LI+ KD S P+ F + F+ V A L+NEA F+KL +G
Sbjct: 15 LDISNSFTHF--VERLIYTYKDWGSD-PH--VFDVFFQVLVEAGLLNEARKFFDKLLNYG 69
Query: 98 LKDEVSYCNL-VDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMS 156
+ CNL + L + ++ F E +G T+ YN+++ F++
Sbjct: 70 VALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCW-----NTESYNILMNSLFRLG 124
Query: 157 WWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
+ M+ +G + D+ SY+ +D C G+ K V+L KEM+ KG+K ++ Y+
Sbjct: 125 KIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYS 184
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
++I + S V +V REM + G P V T+I C+ G + AY + +EM +
Sbjct: 185 SIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAR 244
Query: 277 GCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
VPD I + L +++ LF+ MI+ G P TY L+ + + G ++
Sbjct: 245 EIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKA 304
Query: 334 FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
F + +M ++G +P+ Y AL D L G LD A + EM KGL
Sbjct: 305 FFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQ 352
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 171/353 (48%), Gaps = 11/353 (3%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
Y ++ID K ++ L M+ +P+ F + + V EA FN++
Sbjct: 218 YTTLIDGFCKLGNTQAAYKLFSEMEAR-EIVPDSIAFSALICGLSGSGKVVEADKLFNEM 276
Query: 94 DEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ G + DEV+Y L+D C+ E ++ F N+ V GL T Y + G
Sbjct: 277 IKKGFEPDEVTYTALIDGYCKLG---EMKKAFFLHNQMVQI-GLTPNVVT--YTALADGL 330
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K E EM ++G+ ++ +Y+ ++ +CK+G +AVKL +EMK+ G+ D
Sbjct: 331 CKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDT 390
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
+ Y T++ A + + A + REM + G QP+VVT N ++ LC +G++ + +L
Sbjct: 391 ITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKW 450
Query: 273 MPKKGCVPDVITYHCFFR--CLEKPREI-LGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M +KG +P+ TY+ + C+ I ++ M G+ P +TY +L++ +
Sbjct: 451 MLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARN 510
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
++ + + K+M E + +YNAL+ + L AR+ EEM +GL A
Sbjct: 511 MKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVA 563
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 122/284 (42%), Gaps = 9/284 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + K+A N + T TY ++ D L K E D + L+H M +
Sbjct: 296 CKLGEMKKAFFLHNQM-VQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQL- 353
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N +T+ + A + +A+ ++ E GL D ++Y L+DA + +++A+EL
Sbjct: 354 NISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKAREL- 412
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
E + G V +N+++ G + M ++G++ + +Y+ M
Sbjct: 413 LREMLDRGLQPTV-----VTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIM 467
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
C + ++Y+ M +G+ D YN +I+ + + A +++EM E
Sbjct: 468 KQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFN 527
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
+ + N +IK + ++ EA + EM ++G V Y+ F
Sbjct: 528 LTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLF 571
>gi|242049112|ref|XP_002462300.1| hypothetical protein SORBIDRAFT_02g023500 [Sorghum bicolor]
gi|241925677|gb|EER98821.1| hypothetical protein SORBIDRAFT_02g023500 [Sorghum bicolor]
Length = 541
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 171/372 (45%), Gaps = 14/372 (3%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
+L FF + FTH ++ + L F L +L + D P + F ++
Sbjct: 97 SLRFFLFAAALPGFTHLPESLLILAGSLAGARLFPLLRSL---LSDLPRPALSRDLFPLL 153
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGF 133
F+ Y A L ++A+ F+ ++ FG V+ + + + ++E E F E+ + F
Sbjct: 154 FRAYARAGLPDDAIRAFSSMERFGFLPTVADLHSLLFTLSHNGLVEHAEAFFRESP-IQF 212
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
K Y +++ GW ++ K ++ ++EM +RGV D+ +Y+ +D +C+ G
Sbjct: 213 D-----VSAKTYTILISGWAVVAKPEKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDV 267
Query: 194 WKAVKLYKEMKK-KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
A + K+M++ +G+ D Y +R+ S+ A+RV MR P+V T N
Sbjct: 268 ALAQEQLKDMQRSRGLAPDAATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFTYNA 327
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESG 309
VI+LLCE G V EAY +L EM G PDV +Y+ K +E+ L L RM E
Sbjct: 328 VIRLLCELGEVDEAYNILNEMATYGEKPDVWSYNTLLNTHCKLKEVNKALRLISRMDEGL 387
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL-IDKGMLDMA 368
P +Y M+L+ G + VW ME+ G P Y ++ L KG + A
Sbjct: 388 CLPNRHSYNMILKMLIAIGRVDRAIEVWDGMEKRGFHPGAATYAVMIHGLSCKKGRAEEA 447
Query: 369 RKYDEEMFAKGL 380
Y M G+
Sbjct: 448 CSYFLRMVDDGI 459
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 119/311 (38%), Gaps = 65/311 (20%)
Query: 14 ALEFFNWVET--DCHFTHTTDTYNSVIDILGKFF-----EFDLSWNLIHRMKDNPSSIPN 66
++E F ++ T D H T ++N +++ FF +FD+S
Sbjct: 172 SMERFGFLPTVADLHSLLFTLSHNGLVEHAEAFFRESPIQFDVSAK-------------- 217
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCF 125
T+ I+ + +A F+++ E G++ +V +Y L+DALC V AQE
Sbjct: 218 --TYTILISGWAVVAKPEKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDVALAQEQLK 275
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
++ G + Y LR + M R + ++ +Y+ +
Sbjct: 276 DMQRSRGLA-----PDAATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFTYNAVIR 330
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
++C+ G+ +A + EM G K DV +YNT++ + V+ A+R+ M E C P
Sbjct: 331 LLCELGEVDEAYNILNEMATYGEKPDVWSYNTLLNTHCKLKEVNKALRLISRMDEGLCLP 390
Query: 246 SVVTCNTVIKLL------------------------------------CENGRVREAYAV 269
+ + N ++K+L C+ GR EA +
Sbjct: 391 NRHSYNMILKMLIAIGRVDRAIEVWDGMEKRGFHPGAATYAVMIHGLSCKKGRAEEACSY 450
Query: 270 LAEMPKKGCVP 280
M G P
Sbjct: 451 FLRMVDDGIPP 461
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 185/407 (45%), Gaps = 36/407 (8%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A A+ F + C + TYN++I+ L K D + L+ M DN + P
Sbjct: 207 CDAGQCSDAVLHFREMSKTC--PPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFA-P 263
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA---- 120
N ++ + + A+ V A+ ++ G D VSY +++ LC+ V EA
Sbjct: 264 NVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVM 323
Query: 121 -QELCFGENKNV--------GF------SGLVEMNK----------TKIYNMILRGWFKM 155
+ + G NV GF G VE+ + YN I+ + +
Sbjct: 324 DKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRR 383
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
+ + + + M + G D +YS + CK+GK +A L ++M ++G + DV
Sbjct: 384 NDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACL 443
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
+T+I A+ + +D A + R M C P VV + +I LC+ R+ EA + L M K
Sbjct: 444 STLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVK 503
Query: 276 KGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
C PDV+TY+ L K R I LFDRM +G+ P + TY +++ F + L
Sbjct: 504 NRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDS 563
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
F + ++M+E C PD Y+AL++ L G +D A +EM G
Sbjct: 564 AFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCG 610
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 167/353 (47%), Gaps = 11/353 (3%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
+N VI L + D + L M+++ S P+ T+ + V + V++A +
Sbjct: 915 HNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDM 974
Query: 94 DEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
G + V+Y +L+ LC+ + EA L ++ +V YN I+ G
Sbjct: 975 VSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIV------TYNTIIDGH 1028
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K+ + EEM G ++ +Y++ +D CK GK A+ L + M +KG ++
Sbjct: 1029 CKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNL 1088
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
YN+++ + V+ A ++ M + GC P+VV+ NTVI LC+ +V E +L +
Sbjct: 1089 FTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQ 1148
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRW-G 328
M CVPD++T++ + K + LF+ + ESG P + TY L+ +
Sbjct: 1149 MLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRR 1208
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
F + +++ + + GCSPD YN ++D L +D A K +M + GL+
Sbjct: 1209 FDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLA 1261
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 169/372 (45%), Gaps = 26/372 (6%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D AL FF W ET + H N ++++L K ++ + +L R + + T
Sbjct: 105 DPGAALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLF-RSRIEGQWGGDTVT 163
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENK 129
+ + ++ A + A F++++ GLK +K ++ LC
Sbjct: 164 YSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGV---------HKSILRG--LCDAGQC 212
Query: 130 NVGFSGLVEMNKT-----KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+ EM+KT YN ++ G K EEM G ++ SY+ +
Sbjct: 213 SDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVL 272
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
CK+ + A+ L ++M +G DVV+Y TVI + + VD A RV +M + GCQ
Sbjct: 273 HGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQ 332
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY----HCFFR--CLEKPREI 298
P+V+T T++ C G + A ++ +M ++G P+ ITY H F R +E+ ++
Sbjct: 333 PNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQV 392
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
L + MI++G P Y ++ F + G LR + ++M GC PD + L+DA
Sbjct: 393 LQM---MIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDA 449
Query: 359 LIDKGMLDMARK 370
L +D A++
Sbjct: 450 LCKAAAIDSAQE 461
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 168/369 (45%), Gaps = 21/369 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS++D+ K E + + L+ M +PN ++ + A V+E + +
Sbjct: 1090 TYNSLLDMFCKKDEVERACQLLSSMIQK-GCVPNVVSYNTVIAGLCKATKVHEGVLLLEQ 1148
Query: 93 -LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK---IYNMI 148
L + D V++ ++DA+C+ V A EL F+ + E T YN +
Sbjct: 1149 MLSNNCVPDIVTFNTIIDAMCKTYRVDIAYEL---------FNLIQESGCTPNLVTYNSL 1199
Query: 149 LRGWFKMSWWGKCREFWEEMD-KRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
+ G K + + EM K+G D+ +Y+ +D +CKS + +A KL+ +M G
Sbjct: 1200 VHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDG 1259
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ D V Y+ VI ++ +D A V M + G P +T T+I C+ G + +A
Sbjct: 1260 LAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKAL 1319
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKF 324
+L + KG PDV+T+ F L K R+ L + M+ +G+ P TY LL+ F
Sbjct: 1320 EILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGF 1379
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID-KGMLDMARKYDEEMFAKGLSAK 383
+++ M + GC PD Y LV L+D K D+ + + M G K
Sbjct: 1380 CDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGF--K 1437
Query: 384 PREELGTKL 392
EL +KL
Sbjct: 1438 LNHELSSKL 1446
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 129/239 (53%), Gaps = 4/239 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+ +++ G + G E +EM + GV +++ +++ + +C + K A++L+KEM+
Sbjct: 880 FTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEME 939
Query: 205 KKG-IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
+ G DV Y+T++ ++ S VD A R+ +M GC P+VVT ++++ LC+ G++
Sbjct: 940 ESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKL 999
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFF--RC-LEKPREILGLFDRMIESGIRPKMDTYVML 320
EA A+L M + GC P+++TY+ C L + E L + M++ G +P + TY +L
Sbjct: 1000 DEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVL 1059
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L F + G + + M E G P+ F YN+L+D K ++ A + M KG
Sbjct: 1060 LDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKG 1118
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 167/376 (44%), Gaps = 12/376 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C D A+E + T+ + TYN+++ + + + + + ++ M P
Sbjct: 346 CRVGDLDGAVELVRKM-TERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCP-P 403
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELC 124
+ + + + A + EA ++ G + +V+ L+DALC+ + AQEL
Sbjct: 404 DAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELL 463
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
++G ++ Y++++ K + + + M K D+ +Y+ +
Sbjct: 464 ---RMSIGMDCAPDV---VAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVV 517
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D +CKS + A L+ M+ G+ DVV Y+ VI + +D A ++ M+E C
Sbjct: 518 DGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCV 577
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGL 301
P VVT + +I LC+ G V +A+ V EM GC P+++TY+ L K + +
Sbjct: 578 PDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEM 637
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
+ M + P TY L+ L + V ++M++ GC PD Y L+ AL
Sbjct: 638 LEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQK 697
Query: 362 KGMLDMARKYDEEMFA 377
L++ + +EM A
Sbjct: 698 TNNLELVEQLLKEMEA 713
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 110/208 (52%), Gaps = 4/208 (1%)
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
++ +++I + +C++G A +L KEM + G+ +V+ +N VI+ + + +D A+ ++
Sbjct: 876 NMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELF 935
Query: 236 REMREMG-CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
+EM E G C P V T +T++ L ++G+V +A ++ +M KGC P+V+TY L K
Sbjct: 936 KEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCK 995
Query: 295 P---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFA 351
E L RM SG P + TY ++ + G + + + ++M + GC P+
Sbjct: 996 AGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVT 1055
Query: 352 YNALVDALIDKGMLDMARKYDEEMFAKG 379
Y L+DA G + A E M KG
Sbjct: 1056 YTVLLDAFCKCGKAEDAIGLVEVMVEKG 1083
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 162/377 (42%), Gaps = 34/377 (9%)
Query: 14 ALEFFNWV-ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
A E FN + E+ C T TYNS++ L K FD + L+ M P+ T+
Sbjct: 1177 AYELFNLIQESGC--TPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNT 1234
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNV 131
+ + V+ A F ++ GL D+V+Y ++ +LC+++ + EA + KN
Sbjct: 1235 VIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNG 1294
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
G + Y ++ G+ K K E + + +G D+ ++SI++D + K G
Sbjct: 1295 FDPGAI------TYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRG 1348
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
+ +A +L + M + G+ D V YNT+++ + + A+ ++ MR+ GC+P T
Sbjct: 1349 RLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYT 1408
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI-------LGLFDR 304
T++ L + ++ +LAE+ K H LE E+ + D
Sbjct: 1409 TLVGHLVDKKSYKD---LLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDM 1465
Query: 305 MIESGIRPKMDTYV---MLLRKFGRWGFLRPVFV----------VWKKMEELGCSPDEFA 351
+ G P+ V M R W + V+V +W+ M G PD
Sbjct: 1466 FGKCG-SPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVT 1524
Query: 352 YNALVDALIDKGMLDMA 368
+ +L+ G+LD A
Sbjct: 1525 FLSLLTMCCHAGLLDAA 1541
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 6/182 (3%)
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
++G D N +++A+ + A++VYR ++ C P++ T +I LC G +
Sbjct: 836 SQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRN--KLCCSPNMFTFTILIHGLCRAGDI 893
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESG-IRPKMDTYVM 319
AY +L EMP+ G +VI ++ + L R++ L LF M ESG P + TY
Sbjct: 894 GTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYST 953
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++ + G + + + M GCSP+ Y++L+ L G LD A + M G
Sbjct: 954 IVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSG 1013
Query: 380 LS 381
S
Sbjct: 1014 CS 1015
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 4/143 (2%)
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG- 300
G Q + CN ++ +L + + +A+ + + D +TY + +IL
Sbjct: 121 GYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPA 180
Query: 301 --LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
LFD M G++ + +LR G + +++M + C PD YN +++
Sbjct: 181 YELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMING 239
Query: 359 LIDKGMLDMARKYDEEMFAKGLS 381
L LD A + EEM G +
Sbjct: 240 LSKSDRLDDAIRLLEEMVDNGFA 262
>gi|15228788|ref|NP_191813.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214682|sp|Q3EAF8.1|PP294_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g62540, mitochondrial; Flags: Precursor
gi|332646841|gb|AEE80362.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 177/385 (45%), Gaps = 17/385 (4%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E L + + K A FF W F H + TYNS++ IL K +F+ +++ M
Sbjct: 166 EVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEM--GT 223
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
+ TF I K + A +A+G F + ++ K V N L+D+L K EA
Sbjct: 224 KGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEA 283
Query: 121 QELCFGENKNVGFSGLVEMNKTKI--YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
Q L F L E + Y ++L GW ++ + W +M G+ D+
Sbjct: 284 QVL---------FDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIV 334
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
++++ ++ + +S K A+KL+ MK KG +V +Y +IR ++ A+ + +M
Sbjct: 335 AHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 394
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---P 295
+ G QP +I ++ Y +L EM +KG PD TY+ + + P
Sbjct: 395 VDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP 454
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
++++MI++ I P + T+ M+++ + VW +M + G PD+ +Y L
Sbjct: 455 EHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVL 514
Query: 356 VDALIDKGMLDMARKYDEEMFAKGL 380
+ LI +G A +Y EEM KG+
Sbjct: 515 IRGLISEGKSREACRYLEEMLDKGM 539
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 133/312 (42%), Gaps = 35/312 (11%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A + K+A+ F ++ F +T N ++D LG+ + L ++K+ + PN
Sbjct: 242 AKERKKAVGIFELMKK-YKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFT--PNM 298
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV-----------DALCEYKH 116
T+ ++ + + EA +N + + GLK ++ N++ DA+ + H
Sbjct: 299 MTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLF-H 357
Query: 117 VIEAQELC------------FGENKNVG-----FSGLVEMN---KTKIYNMILRGWFKMS 156
V++++ C F + ++ F +V+ +Y ++ G+
Sbjct: 358 VMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQK 417
Query: 157 WWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
E +EM ++G D +Y+ + +M P ++Y +M + I+ + +N
Sbjct: 418 KLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFN 477
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
++++ V+ + V+ EM + G P + +I+ L G+ REA L EM K
Sbjct: 478 MIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDK 537
Query: 277 GCVPDVITYHCF 288
G +I Y+ F
Sbjct: 538 GMKTPLIDYNKF 549
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 180/385 (46%), Gaps = 36/385 (9%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TY +++D LGK D + +L+ M+ P+ T+ + + E++
Sbjct: 562 TVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCE-PSVVTYSSLMASFYKRDQEEESLSL 620
Query: 90 FNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG-----------FSGLV 137
F+++ G + D +Y +++ LC+ V +A ++ FG K G S LV
Sbjct: 621 FDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDV-FGRMKEEGMEPLLGNYKTLLSSLV 679
Query: 138 EMNK-------------------TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
+ K T +YN+++ G K + + + + M + ++ DL
Sbjct: 680 KDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLF 739
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+Y+ +D + KSG+ +A ++ +M ++G + DVVAY +++ +G + A+ ++R M
Sbjct: 740 TYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAM 799
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI 298
+ C P VVT +++I L + GRV EAY KGC P+V Y K +
Sbjct: 800 AKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMV 859
Query: 299 ---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
L LF+ M P + TY LL + G L + ++ME++GC PD YN L
Sbjct: 860 DRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNIL 919
Query: 356 VDALIDKGMLDMARKYDEEMFAKGL 380
+D + GM+D A Y + M KG+
Sbjct: 920 IDGVGKMGMVDEAESYFKRMKEKGI 944
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 169/375 (45%), Gaps = 41/375 (10%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKR 76
F E +C + YN++ID LGK E D++ L MKD +PN T+ IM
Sbjct: 380 FVEMKENNC--SPDAIAYNTLIDGLGKAGEADMACGLFKEMKDR-GLVPNLRTYNIMISV 436
Query: 77 YVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCE----------YKHVIE-AQELC 124
A EA F+ L E G + D +Y L+D L + K ++E E
Sbjct: 437 LGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECI 496
Query: 125 FGENKNVGFSGLVE-MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ N G G +E ++T Y + G+ + +Y+
Sbjct: 497 ISRDSNAGHEGTIEGADRTVEYPSL--GFKSLGEI--------------------TYNTL 534
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
M +G +AVKL + MKK VV Y T++ +G + +D A+ + REM + GC
Sbjct: 535 MSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGC 594
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LG 300
+PSVVT ++++ + + E+ ++ EM +KGCV DV TY CL K ++ L
Sbjct: 595 EPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALD 654
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+F RM E G+ P + Y LL + + ++ +++E PD F YN +V+ L+
Sbjct: 655 VFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLV 714
Query: 361 DKGMLDMARKYDEEM 375
+D A K + M
Sbjct: 715 KSNRVDEACKLVDSM 729
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 174/387 (44%), Gaps = 48/387 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+ VI+ L K + D + ++ RMK+ P ++ + V ++ A+ FN+
Sbjct: 635 TYSLVINCLCKSDDVDQALDVFGRMKEEGME-PLLGNYKTLLSSLVKDEKIDFALQIFNE 693
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFG-ENKNVGFSGLVEMNKTKIYNMILR 150
L E L D Y +V+ L + V EA +L +N+N+ + Y +L
Sbjct: 694 LQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNI-------LPDLFTYTSLLD 746
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
G K + + +M + G D+ +Y+ MD++ K GK A+ +++ M KK
Sbjct: 747 GLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVP 806
Query: 211 DVVAYNTVIRAVG---------------VSEG--------------------VDFAMRVY 235
DVV Y+++I ++G +S+G VD A+ ++
Sbjct: 807 DVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELF 866
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK- 294
EM+ C P++VT N ++ L + GR+ A +L EM K GCVPD++TY+ + K
Sbjct: 867 EEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKM 926
Query: 295 --PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
E F RM E GI P + T+ L+ G+ L ++ MEE G +P Y
Sbjct: 927 GMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTY 986
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKG 379
N L+D L G + A EM KG
Sbjct: 987 NVLIDILGRAGKVHEAAMIFHEMKVKG 1013
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 155/373 (41%), Gaps = 44/373 (11%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D A FF W ++HT TY +I L E D ++ M I H
Sbjct: 161 DLHLAKCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMH-L 219
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENK 129
+ + + + + V+ A+ FN++ FG CN
Sbjct: 220 LTSLLRTFGSTNNVSGALEIFNQMKSFG-------CN----------------------- 249
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
T +YN +L K ++ + ++ + + D ++ I++ +
Sbjct: 250 ----------PSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNR 299
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
SG+ A + +EM K GI V + +I A+ S +D A + + M+ + C P+VVT
Sbjct: 300 SGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVT 359
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE---ILGLFDRMI 306
T++ L + GR+ EA V EM + C PD I Y+ L K E GLF M
Sbjct: 360 YTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMK 419
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
+ G+ P + TY +++ G+ G + ++ ++E G PD F YN L+D L G +D
Sbjct: 420 DRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMD 479
Query: 367 MARKYDEEMFAKG 379
+EM KG
Sbjct: 480 KVLAIIKEMVEKG 492
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 168/351 (47%), Gaps = 14/351 (3%)
Query: 4 LSCYANDWKR--ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
LS D K AL+ FN ++ + T YN +++ L K D + L+ MK N
Sbjct: 675 LSSLVKDEKIDFALQIFNELQ-ESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMK-NQ 732
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA 120
+ +P+ T+ + + + EA F K+ E G + D V+Y +L+D L + + A
Sbjct: 733 NILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHA 792
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+ K +V Y+ ++ K + F+E +G ++ Y
Sbjct: 793 LIIFRAMAKKRCVPDVV------TYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVY 846
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
S +D K G +A++L++EM+++ ++V YN ++ + + ++ A ++ EM +
Sbjct: 847 SSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEK 906
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL- 299
+GC P +VT N +I + + G V EA + M +KG VPDVIT+ L K ++L
Sbjct: 907 VGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLE 966
Query: 300 --GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
LFD M E G P + TY +L+ GR G + +++ +M+ GC PD
Sbjct: 967 ACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPD 1017
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 137/290 (47%), Gaps = 31/290 (10%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY S++D LGK + ++N+ +M + P+ + + ++ A+ F
Sbjct: 740 TYTSLLDGLGKSGRLEEAFNMFTKMTEEGHE-PDVVAYTSLMDVLGKGGKLSHALIIFRA 798
Query: 93 L-DEFGLKDEVSYCNLVDALCEYKHVIEA-----QELCFGENKNVG-FSGLV-------- 137
+ + + D V+Y +L+D+L + V EA + G NVG +S L+
Sbjct: 799 MAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGM 858
Query: 138 ---------EMNKTK------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
EM + + YN +L G K + EEM+K G V DL +Y+I
Sbjct: 859 VDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNI 918
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D + K G +A +K MK+KGI DV+ + ++I ++G + + A ++ M E G
Sbjct: 919 LIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEG 978
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
PSVVT N +I +L G+V EA + EM KGC+PD IT R L
Sbjct: 979 YNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRIL 1028
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 111/266 (41%), Gaps = 39/266 (14%)
Query: 158 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
KC W + G + +Y++ + + + + V++ M K+G ++ + +
Sbjct: 164 LAKCFFTWAG-QQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTS 222
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
++R G + V A+ ++ +M+ GC PS N V++LL + G A V ++ +
Sbjct: 223 LLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFR 282
Query: 278 CVPDVITY----HCFFR------CLEKPREILG------------LFDRMIESG------ 309
PD T+ H F R E +E++ L D +++SG
Sbjct: 283 IQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEAC 342
Query: 310 ----------IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
P + TY L+ + G L V+ +M+E CSPD AYN L+D L
Sbjct: 343 KFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGL 402
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPR 385
G DMA +EM +GL R
Sbjct: 403 GKAGEADMACGLFKEMKDRGLVPNLR 428
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 10/211 (4%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKR 76
F N + C T Y+S+ID GK D + L M+ PN T+ +
Sbjct: 831 FENSISKGC--TPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCP-PNIVTYNNLLSG 887
Query: 77 YVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSG 135
A +N A ++++ G + D V+Y L+D + + V EA+ F K G
Sbjct: 888 LAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESY-FKRMKEKGI-- 944
Query: 136 LVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK 195
+ + ++ K+ + E ++ M++ G + +Y++ +DI+ ++GK +
Sbjct: 945 ---VPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHE 1001
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
A ++ EMK KG D + + R + V E
Sbjct: 1002 AAMIFHEMKVKGCMPDGITIGIMKRILSVRE 1032
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 180/384 (46%), Gaps = 43/384 (11%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +I+ L K + L+ L +MK N + T+ ++ + EA+ F++
Sbjct: 1053 TYGILINGLCKARKTGLAIKLHEKMKGNCKG--DVFTYGMIIDALCKDGMTTEALDMFSE 1110
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G L D V Y +L+D LC + + EA E F E + G S V + I+ + G
Sbjct: 1111 MIGAGILPDVVVYSSLMDGLCRFGRLKEALEF-FKEMEGRGISADVYTYNSLIHGLSRAG 1169
Query: 152 -WFKMSWW-----------------------------GKCREFWEEMDKRGVVKDLHSYS 181
W +++W+ G+ ++ E M +G D+ +Y+
Sbjct: 1170 LWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYN 1229
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
M+ +C G+ A KL++ + +GIK++V +YN +I + +D A R + EMR
Sbjct: 1230 TLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPK 1289
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REI 298
G +PS VT NT+I LC++GRVR A + EM G + TY L K E
Sbjct: 1290 GLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEA 1349
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL---GCSPDEFAYNAL 355
+ LF + ++ +P ++ + +LL R G L WK+ +E+ G PD AYN L
Sbjct: 1350 MDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEE---AWKQFDEISKNGLEPDTIAYNIL 1406
Query: 356 VDALIDKGMLDMARKYDEEMFAKG 379
++ L +KGML A K +M KG
Sbjct: 1407 INGLCNKGMLSEAVKLLWQMEEKG 1430
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 8/250 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++++ L + + + L + D + N ++ I+ Y ++EA F +
Sbjct: 1227 TYNTLMNGLCLVGQLEDATKLFESLADRGIKL-NVFSYNILINGYCKDQKIDEAFRFFEE 1285
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ GLK V+Y L+ ALC+ V AQ+L F E + G + K Y ++L G
Sbjct: 1286 MRPKGLKPSTVTYNTLIGALCQSGRVRTAQKL-FVEMQTCG-----QFLKLSTYCVLLDG 1339
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + + ++ + K ++ +SI +D MC++GK +A K + E+ K G++ D
Sbjct: 1340 LCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPD 1399
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+AYN +I + + A+++ +M E GC P +T N +I+ L + + EA +L
Sbjct: 1400 TIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLE 1459
Query: 272 EMPKKGCVPD 281
EM + PD
Sbjct: 1460 EMRNRNFSPD 1469
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 142/318 (44%), Gaps = 12/318 (3%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A WK F N + D F+ T+ +ID L K + + ++ M+ P+
Sbjct: 1168 AGLWKEVTWFLNLM-VDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKE-PDI 1225
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFG 126
T+ + + +A F L + G+K V SY L++ C+ + + EA F
Sbjct: 1226 LTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRF-FE 1284
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
E + G T YN ++ + ++ + EM G L +Y + +D
Sbjct: 1285 EMRPKGLK-----PSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDG 1339
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+CK+G +A+ L++ +KK K ++ ++ ++ + + ++ A + + E+ + G +P
Sbjct: 1340 LCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPD 1399
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFD 303
+ N +I LC G + EA +L +M +KGC+PD IT++ + L K EI + L +
Sbjct: 1400 TIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLE 1459
Query: 304 RMIESGIRPKMDTYVMLL 321
M P MLL
Sbjct: 1460 EMRNRNFSPDEAVTSMLL 1477
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 165/356 (46%), Gaps = 14/356 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEF-DLSWNLIHRMKDNPSSI 64
C K ALEFF +E + TYNS+I L + + +++W ++ M D S
Sbjct: 1131 CRFGRLKEALEFFKEMEGR-GISADVYTYNSLIHGLSRAGLWKEVTW-FLNLMVDRGFS- 1187
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ TF I+ V EA + G + D ++Y L++ LC + +A +L
Sbjct: 1188 PDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKL 1247
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + G +++N YN+++ G+ K + F+EEM +G+ +Y+
Sbjct: 1248 -FESLADRG----IKLNVFS-YNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTL 1301
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ +C+SG+ A KL+ EM+ G + + Y ++ + + ++ AM +++ +++
Sbjct: 1302 IGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEH 1361
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILG 300
+P++ + ++ +C G++ EA+ E+ K G PD I Y+ L E +
Sbjct: 1362 KPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVK 1421
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
L +M E G P T+ ++++ + + + ++M SPDE + L+
Sbjct: 1422 LLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 4/229 (1%)
Query: 139 MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK 198
M T +N +L K+ ++ + +++ G+ DL++ +I + C
Sbjct: 943 MPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFG 1002
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
++ K+G + D V T+++ V + G+ A++++ EM + G T +I LC
Sbjct: 1003 VFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLC 1062
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMD 315
+ + A + +M K C DV TY L K E L +F MI +GI P +
Sbjct: 1063 KARKTGLAIKLHEKM-KGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVV 1121
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
Y L+ R+G L+ +K+ME G S D + YN+L+ L G+
Sbjct: 1122 VYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGL 1170
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 117/258 (45%), Gaps = 24/258 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI-PNHATFRIMFKRYVTAHLVNEAMGTFN 91
+YN +I+ K + D ++ M+ P + P+ T+ + + V A F
Sbjct: 1262 SYNILINGYCKDQKIDEAFRFFEEMR--PKGLKPSTVTYNTLIGALCQSGRVRTAQKLFV 1319
Query: 92 KLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
++ G ++S YC L+D LC+ H+ EA +L F K +E +++++L
Sbjct: 1320 EMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDL-FQSIKKTEHKPNIE-----VFSILLD 1373
Query: 151 GWFKMSWWGKCREFWEEMD---KRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
G M GK E W++ D K G+ D +Y+I ++ +C G +AVKL +M++KG
Sbjct: 1374 G---MCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG 1430
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
D + +N +I+ + + A+++ EMR P + LLC + +
Sbjct: 1431 CLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSM---LLCLASFDPQWH 1487
Query: 268 AVLAEMPKK-----GCVP 280
A L +P G VP
Sbjct: 1488 AALVSLPNALQKGVGSVP 1505
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 6/188 (3%)
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK-LL 257
+Y+++ GI+ D+ N +I V V+ + G +P VT T++K +
Sbjct: 968 MYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVW 1027
Query: 258 CENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKM 314
ENG + +A + EM KKG + D TY L K R+ + L ++M + + +
Sbjct: 1028 MENG-IPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDV 1085
Query: 315 DTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
TY M++ + G ++ +M G PD Y++L+D L G L A ++ +E
Sbjct: 1086 FTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKE 1145
Query: 375 MFAKGLSA 382
M +G+SA
Sbjct: 1146 MEGRGISA 1153
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 294 KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
K + + LFDR + S P DT+ LL + G+ VF +++K+ ++G PD + N
Sbjct: 926 KLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLN 985
Query: 354 ALV 356
L+
Sbjct: 986 ILI 988
>gi|297821162|ref|XP_002878464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324302|gb|EFH54723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 628
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 178/385 (46%), Gaps = 17/385 (4%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+ L + + K A FF W F H + TYNS++ IL K +F+ +++ M
Sbjct: 175 KVLERFRHARKPAFRFFCWAAEKQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM--GT 232
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
+ TF I K + A +A+G F + ++ K V N L+D+L K EA
Sbjct: 233 KGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEA 292
Query: 121 QELCFGENKNVGFSGLVEMNKTKI--YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
Q L F L E + Y ++L GW ++ + W +M +G+ D+
Sbjct: 293 QVL---------FDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIV 343
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
++++ ++ + +S K A+KL+ MK KG +V +Y +IR ++ A+ + +M
Sbjct: 344 AHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 403
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---P 295
+ G QP +I ++ Y +L EM +KG PD TY+ + + P
Sbjct: 404 VDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP 463
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
++++MI++ I P + T+ M+++ + VW +M + G PD+ +Y L
Sbjct: 464 EHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGSAVWDEMIKKGICPDDNSYTVL 523
Query: 356 VDALIDKGMLDMARKYDEEMFAKGL 380
+ LI +G A +Y EEM KG+
Sbjct: 524 IRGLIGEGKSREACRYLEEMLDKGM 548
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 134/311 (43%), Gaps = 33/311 (10%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A + K+A+ F ++ F +T N ++D LG+ + L ++K+ + PN
Sbjct: 251 AKERKKAVGIFELMKK-YKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFT--PNM 307
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYK---------HV 117
T+ ++ + + EA +N + + GLK D V++ +++ L + HV
Sbjct: 308 MTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHV 367
Query: 118 IEAQELC------------FGENKNVG-----FSGLVEMN---KTKIYNMILRGWFKMSW 157
++++ C F + ++ F +V+ +Y ++ G+
Sbjct: 368 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKK 427
Query: 158 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
E +EM ++G D +Y+ + +M P A ++Y +M + I+ + +N
Sbjct: 428 LDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNM 487
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
++++ ++ + V+ EM + G P + +I+ L G+ REA L EM KG
Sbjct: 488 IMKSYFMARNYEMGSAVWDEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKG 547
Query: 278 CVPDVITYHCF 288
+I Y+ F
Sbjct: 548 MKTPLIDYNKF 558
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 191/396 (48%), Gaps = 18/396 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + + AL+ V+ + + YN++ID + K + +++L M S P
Sbjct: 201 CKVGETRAALDLLQRVDGNLVQPNVV-MYNTIIDSMCKVKLVNEAFDLFSEMVSKGIS-P 258
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELC 124
+ T+ + + + +A+ FNK+ +K +V N LV+A C+ + E + +
Sbjct: 259 DVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTV- 317
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F G ++ N YN ++ G+ + K + + M + GV D+ SYSI +
Sbjct: 318 FDMMMKQG----IKPNFVT-YNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMI 372
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ CK K +A+ L+KEM +K I DVV Y+++I + S + +A+++ +M + G
Sbjct: 373 NGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVP 432
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--C----LEKPREI 298
P++ T N+++ LC+ +V +A A+L + KG PD+ TY + C LE R++
Sbjct: 433 PNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKV 492
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
F+ ++ G + Y ++++ F G + KME+ GC PD Y ++ +
Sbjct: 493 ---FEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILS 549
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQ 394
L K DMA K EM A+GL + T+L Q
Sbjct: 550 LFKKDENDMAEKLLREMIARGLPLNFYDLYLTRLAQ 585
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 146/323 (45%), Gaps = 16/323 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL 123
PN I+ + L+ A F K+ + G + D +++ L LC K I+ L
Sbjct: 118 PNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLC-LKGQIQQAFL 176
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ +GF ++ Y ++ G K+ + + +D V ++ Y+
Sbjct: 177 FHDKVVALGF----HFDQIS-YGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTI 231
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D MCK +A L+ EM KGI DVV Y+ +I + + A+ ++ +M
Sbjct: 232 IDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENI 291
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPRE 297
+P V T N ++ C++G+++E V M K+G P+ +TY +C + + K +
Sbjct: 292 KPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKS 351
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
I F+ M + G+ P + +Y +++ F + ++K+M PD Y++L+D
Sbjct: 352 I---FNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLID 408
Query: 358 ALIDKGMLDMARKYDEEMFAKGL 380
L G + A + ++M +G+
Sbjct: 409 GLSKSGRISYALQLVDQMHDRGV 431
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 111/254 (43%), Gaps = 5/254 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+N IL K + ++M+ RG+ +L + +I ++ C+ G A ++ ++
Sbjct: 88 FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKIL 147
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K G D + + T+ + + + + A + ++ +G ++ T+I LC+ G R
Sbjct: 148 KMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETR 207
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLL 321
A +L + P+V+ Y+ + K + E LF M+ GI P + TY L+
Sbjct: 208 AALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALI 267
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
F G L+ ++ KM PD + +N LV+A G + + + M +G+
Sbjct: 268 SGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGI- 326
Query: 382 AKPREELGTKLVQG 395
KP L+ G
Sbjct: 327 -KPNFVTYNSLMDG 339
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 93/189 (49%), Gaps = 3/189 (1%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
AV L+ + ++ +N ++ ++ S+ + + ++M G +P++V CN +I
Sbjct: 69 AVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILIN 128
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPREILGLF-DRMIESGIRP 312
C+ G + A++V A++ K G VPD IT+ + CL+ + LF D+++ G
Sbjct: 129 CFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHF 188
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
+Y L+ + G R + ++++ P+ YN ++D++ +++ A
Sbjct: 189 DQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLF 248
Query: 373 EEMFAKGLS 381
EM +KG+S
Sbjct: 249 SEMVSKGIS 257
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 179/400 (44%), Gaps = 45/400 (11%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMK---------------------------------D 59
TYN VI+ L + E + + L+ RM+ +
Sbjct: 270 TYNVVINGLARKGELEKAAQLVDRMRMSKKASAFTFNPLITGYFARGSVEKAGALQLEME 329
Query: 60 NPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVI 118
N +P T+ + + V A F ++ GL D ++Y +L++ C+ ++
Sbjct: 330 NEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLK 389
Query: 119 EAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
EA L FG+ K G + V YN++L G+ ++ + R F +EM ++G D+
Sbjct: 390 EALWL-FGDLKRAGLAPSV-----LTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVS 443
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+Y+I M+ K + + EM KG++ D AYNT I A + A ++ M
Sbjct: 444 TYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVM 503
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC---LEKP 295
G VT N + LC++G +++AY + +M G PD ITY C +
Sbjct: 504 ISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRL 563
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
RE +FD M+ SG+ P TY + + + R G L + ++KM E G P+E YN L
Sbjct: 564 REARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVL 623
Query: 356 VDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+ AL G ++A ++ EM +GLS P + T L+ G
Sbjct: 624 IHALCRMGRTNLAYQHFHEMLERGLS--PNKYTYTLLIDG 661
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 143/324 (44%), Gaps = 16/324 (4%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQE 122
+P+ T+ + Y A + EA+ F L GL V +Y L+D C + EA+
Sbjct: 369 LPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARR 428
Query: 123 LCFGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
F + +VE Y +++ G K+ REF++EM +G+ D +
Sbjct: 429 --FKQE-------MVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFA 479
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y+ + G +A +L + M +GI D V YN + + S + A ++ +M
Sbjct: 480 YNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMV 539
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI- 298
G QP +T +I CE GR+REA + M G P +TY F + +
Sbjct: 540 SDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLY 599
Query: 299 --LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
G F +M+E G+RP TY +L+ R G + + +M E G SP+++ Y L+
Sbjct: 600 SAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLI 659
Query: 357 DALIDKGMLDMARKYDEEMFAKGL 380
D +G + A + EM G+
Sbjct: 660 DGNCKEGNWEEAIRLYSEMHQHGI 683
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 131/299 (43%), Gaps = 11/299 (3%)
Query: 87 MGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYN 146
+ F ++ G+ + CNLV + + + E +G + YN
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSI-----VTYN 235
Query: 147 MILRGWFKMSWWGKCREFWEEMDKR--GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+L +F+ + + EM+ R G + +Y++ ++ + + G+ KA +L M+
Sbjct: 236 TLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMR 295
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K +N +I V+ A + EM G P+VVT NT+I + +G V
Sbjct: 296 MSK-KASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVE 354
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLL 321
A EM G +PD+ITY+ K +E L LF + +G+ P + TY +LL
Sbjct: 355 AARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILL 414
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ R G L ++M E GC PD Y L++ L M R++ +EM +KGL
Sbjct: 415 DGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGL 473
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 67/131 (51%)
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+ R+ ++ M G+ +Y++++ C+ G + A +++M ++G++ + V YN +I
Sbjct: 565 EARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLI 624
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
A+ + A + + EM E G P+ T +I C+ G EA + +EM + G
Sbjct: 625 HALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIH 684
Query: 280 PDVITYHCFFR 290
PD T++ F+
Sbjct: 685 PDHCTHNALFK 695
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 65/162 (40%), Gaps = 32/162 (19%)
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
+NT R S + +REM G P + CN V++ L + R + +V AEM
Sbjct: 164 FNTRARNPAPSTCSTLCLAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEML 223
Query: 275 KKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKF-GRWGFLRPV 333
+ G P ++TY+ L D G ++D LLR+ R G
Sbjct: 224 QLGIEPSIVTYNT-------------LLDSFFREG---RVDQAAKLLREMEARPG----- 262
Query: 334 FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
GC P + YN +++ L KG L+ A + + M
Sbjct: 263 ----------GCLPSDVTYNVVINGLARKGELEKAAQLVDRM 294
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 6/100 (6%)
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKF---GRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
L F M G+ P + ++LR RW +R V+ +M +LG P YN L
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYA---EMLQLGIEPSIVTYNTL 237
Query: 356 VDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+D+ +G +D A K EM A+ P + ++ G
Sbjct: 238 LDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVING 277
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 187/392 (47%), Gaps = 15/392 (3%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
+ ++ +FN + D F ++ +N+++ + F+ W + K + +
Sbjct: 107 SQSLDSSIYYFNEM-VDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK--IKVVLDV 163
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFG 126
+F I+ K A + ++ +L EFG V Y L+D C+ + +A++L F
Sbjct: 164 YSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFF- 222
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
+G GLV T Y +++ G FK + E +E+M + GV +LH+Y+ M+
Sbjct: 223 ---EMGKFGLVANEWT--YTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQ 277
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+CK G+ A K++ EM+++G+ ++V YNT+I + + A V +M+ G P+
Sbjct: 278 LCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPN 337
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFD 303
++T NT+I C ++ +A ++ ++ +G P ++TY+ K + G +
Sbjct: 338 LITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVK 397
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
M E GI+P TY +L+ F R + + MEELG +PD Y+ L+ KG
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKG 457
Query: 364 MLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
++ A + + M K +P E + +V G
Sbjct: 458 RMNEASRLFKSMVEKKF--EPNEVIYNTMVLG 487
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 140/295 (47%), Gaps = 12/295 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN V++ L K ++ + M++ S N T+ + NEA ++
Sbjct: 270 TYNCVMNQLCKDGRTKDAFKVFDEMRERGVSC-NIVTYNTLIGGLCREMKANEANEVMDQ 328
Query: 93 LDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G+ ++Y L+D C + + +A LC +++ GL T YN+++ G
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVRKLGKALSLC----RDLKSRGLSPSLVT--YNILVSG 382
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K + +EM++RG+ +Y+I +D +S KA++L M++ G+ D
Sbjct: 383 FCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPD 442
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V Y+ +I + ++ A R+++ M E +P+ V NT++ C+ G A +
Sbjct: 443 VHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFR 502
Query: 272 EMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRK 323
EM +K P+V +Y L K +E GL ++MI+SGI P D+ + L+ +
Sbjct: 503 EMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPS-DSILNLISR 556
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 13/161 (8%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
P+ T+ I+ + + + +A+ + ++E GL +V +Y L+ C + EA L
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRL 465
Query: 124 CFGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
F +VE IYN ++ G+ K + + EM+++ + ++ SY
Sbjct: 466 ---------FKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASY 516
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
++++CK K +A L ++M GI N + RA
Sbjct: 517 RYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLISRA 557
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 173/379 (45%), Gaps = 14/379 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTD--TYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
C A A F ++ H T D TY S+I+ LG+ D ++ L +M D +
Sbjct: 455 CKAQRLDDACSIFEGLD---HKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLD-ANQ 510
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQEL 123
IPN + + + + + +N++ G ++ N IE
Sbjct: 511 IPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRA 570
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F E KN+GF + + Y +++ G K + + E + M ++G V D +Y+
Sbjct: 571 LFQEIKNLGF-----IPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTV 625
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D CKSGK KA +L +EMK KG + VV Y +VI + + +D A ++ E + G
Sbjct: 626 IDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGI 685
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LG 300
+ +VV +++I + GR+ EAY ++ E+ +KG P+V T++C L K EI L
Sbjct: 686 ELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALV 745
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
F M + P TY +L+ + FV W++M++ G P+ F Y ++ L
Sbjct: 746 CFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLA 805
Query: 361 DKGMLDMARKYDEEMFAKG 379
G + A E+ KG
Sbjct: 806 KAGNIVEADTLFEKFKEKG 824
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 165/385 (42%), Gaps = 47/385 (12%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN ID GK + D++W H MK N + + T+ M A +NEA+ F +
Sbjct: 273 YNVCIDCFGKAGKVDMAWKFFHEMKAN-GLVLDDVTYTSMIGVLCKADRLNEAVELFEHM 331
Query: 94 DEF-GLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
D+ + +Y ++ +A L + + +V YN IL
Sbjct: 332 DQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVS------YNCILSCL 385
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
+ + + +EEM K+ + +L +Y+I +D++CK+GK A+ + MK G+ +V
Sbjct: 386 GRKGQVDEALKKFEEM-KKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNV 444
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY----- 267
+ N ++ + ++ +D A ++ + C+P VT ++I+ L +GRV EAY
Sbjct: 445 ITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQ 504
Query: 268 ------------------------------AVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
+ EM + GC PD++ + + C+ K E
Sbjct: 505 MLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGE 564
Query: 298 I---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
I LF + G P +Y +L+ + GF + ++ M+E GC D AYN
Sbjct: 565 IEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNT 624
Query: 355 LVDALIDKGMLDMARKYDEEMFAKG 379
++D G ++ A + EEM KG
Sbjct: 625 VIDGFCKSGKVNKAYQLLEEMKTKG 649
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 163/363 (44%), Gaps = 12/363 (3%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D A+ +F W E H + YNS++ ++ + +F+ ++ M N+
Sbjct: 109 DVNNAVNYFRWAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTC 168
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGEN 128
I+ ++ + + EA + + + S Y NL+ AL + + F +
Sbjct: 169 IEIVLS-FIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDS-DCMLTLFQQM 226
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
+ +G++ V + + ++R + + +EM + D+ Y++ +D
Sbjct: 227 QELGYAVNVHL-----FTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFG 281
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
K+GK A K + EMK G+ +D V Y ++I + ++ ++ A+ ++ M + P
Sbjct: 282 KAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAY 341
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRM 305
NT+I G+ +AY++L +KGC+P V++Y+C CL + ++ L F+ M
Sbjct: 342 AYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM 401
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
+ I P + TY +++ + G L VV M++ G P+ N +VD L L
Sbjct: 402 KKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRL 460
Query: 366 DMA 368
D A
Sbjct: 461 DDA 463
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 123/274 (44%), Gaps = 12/274 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + +A + ++T H T TY SVID L K D ++ L K +
Sbjct: 630 CKSGKVNKAYQLLEEMKTKGH-EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIEL- 687
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELC 124
N + + + ++EA +L + GL V N L+DAL + + + EA +C
Sbjct: 688 NVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEAL-VC 746
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F K++ + Y++++ G K+ + K FW+EM K+G ++ +Y+ +
Sbjct: 747 FQSMKDLKCTP-----NYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMI 801
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ K+G +A L+++ K+KG D YN +I + + A R++ E R GC
Sbjct: 802 SGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCS 861
Query: 245 PSVVTCNTVIKLLCENGRVREAY---AVLAEMPK 275
TC ++ L + + +A AVL E K
Sbjct: 862 IYTKTCVVLLDSLHKAECIEQAAIVGAVLRETAK 895
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 3/170 (1%)
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
AYN+++ + + + ++ EM G PS TC ++ ++ ++REA+ + M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191
Query: 274 PKKGCVPDVITYHCFFRCLEKPRE---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
K P Y L R+ +L LF +M E G + + L+R F R G +
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ +M+ PD YN +D G +DMA K+ EM A GL
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGL 301
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 144/342 (42%), Gaps = 36/342 (10%)
Query: 35 NSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLD 94
N+ +D + K E + L +K N IP+ ++ I+ V A +EA F +
Sbjct: 553 NTYMDCVFKAGEIEKGRALFQEIK-NLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMK 611
Query: 95 EFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG-----------FSGLVEMNKT 142
E G + D +Y ++D C+ V +A +L E K G GL ++++
Sbjct: 612 EQGCVLDTRAYNTVIDGFCKSGKVNKAYQL-LEEMKTKGHEPTVVTYGSVIDGLAKIDRL 670
Query: 143 K-------------------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
IY+ ++ G+ K+ + EE+ ++G+ ++++++
Sbjct: 671 DEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCL 730
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D + K+ + +A+ ++ MK + + Y+ +I + + A ++EM++ G
Sbjct: 731 LDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGF 790
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE---KPREILG 300
+P+V T T+I L + G + EA + + +KG V D Y+ L + +
Sbjct: 791 KPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYR 850
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE 342
LF+ G T V+LL + + +V + E
Sbjct: 851 LFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRE 892
>gi|297839201|ref|XP_002887482.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333323|gb|EFH63741.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 490
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 168/380 (44%), Gaps = 18/380 (4%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILG----KFFEFDLSWNLIHRMKDNPSSIPNH 67
K A FF W H++H YN +IDIL K +F + +++ MK N ++
Sbjct: 38 KTAFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNKKTVVPA 97
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFG 126
+ ++Y +L + K + E++ N L+DALC+ V E + L
Sbjct: 98 DILLEILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRR 157
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
V +N++ GW ++ K + EEM + G + +Y +D
Sbjct: 158 MRHRVKPDATT-------FNVLFFGWCRVRDPKKAMKLLEEMIQAGHKPENFTYCAAIDT 210
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT---VIRAVGVSEGVDFAMRVYREMREMGC 243
C++G +A L++ M KG + T +I A+ ++ + + M GC
Sbjct: 211 FCQAGMVDEAADLFEFMITKGSVVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGC 270
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILG 300
P V T VI+ +C G+V EAY L EM KG PD++TY+CF R L K E L
Sbjct: 271 LPDVSTYKDVIEGMCMAGKVEEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKSDEALK 330
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L+ RM+ES P + TY ML+ F F WK+M+E C D Y +++ L
Sbjct: 331 LYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWKEMDERDCVQDIETYCVMINGLF 390
Query: 361 DKGMLDMARKYDEEMFAKGL 380
D A EE+ KGL
Sbjct: 391 DCHRAKEACFLLEEVVNKGL 410
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 139/317 (43%), Gaps = 11/317 (3%)
Query: 32 DTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
+ +N ++D L K L+ RM+ P+ TF ++F + +AM
Sbjct: 133 NAFNMLLDALCKCGLVKEGEALLRRMRHRVK--PDATTFNVLFFGWCRVRDPKKAMKLLE 190
Query: 92 KLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
++ + G K E +YC +D C+ V EA +L + +V K + +++
Sbjct: 191 EMIQAGHKPENFTYCAAIDTFCQAGMVDEAADLF---EFMITKGSVVSAPTAKTFALMIV 247
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
K +C E M G + D+ +Y ++ MC +GK +A K EM KG
Sbjct: 248 ALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAGKVEEAYKFLDEMSNKGYPP 307
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
D+V YN +R + + D A+++Y M E C PSV T N +I + E A+
Sbjct: 308 DIVTYNCFLRVLCENRKSDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTW 367
Query: 271 AEMPKKGCVPDVITY----HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
EM ++ CV D+ TY + F C + +E L + ++ G++ + L +
Sbjct: 368 KEMDERDCVQDIETYCVMINGLFDC-HRAKEACFLLEEVVNKGLKLPYRAFDSFLMRLST 426
Query: 327 WGFLRPVFVVWKKMEEL 343
G L+ + + + M++
Sbjct: 427 VGNLKAIHKLSEHMKKF 443
>gi|356547370|ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 628
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 187/394 (47%), Gaps = 15/394 (3%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A F++W D Y ++I +L + +F W LI M+ + F I+
Sbjct: 113 AYRFYSWASKQSGHRLDHDAYKAMIKVLSRMRQFGAVWALIEEMRQENPHLITPQVFVIL 172
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
+R+ +A +V++A+ +++ +G + DE + L+DAL + V EA L
Sbjct: 173 MRRFASARMVHKAVQVLDEMPNYGCEPDEYVFGCLLDALRKNGSVKEAASL--------- 223
Query: 133 FSGLVEMNKTKI--YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS 190
F L K + + +L GW K + + +M G+ D+ Y+ + ++
Sbjct: 224 FEELRYRWKPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDAGIEPDIVVYNNLLGGYAQA 283
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTC 250
K A L KEM++KG + + +Y +I+++ E ++ A RV+ EM+ GCQ +VT
Sbjct: 284 DKMGDAYDLLKEMRRKGCEPNATSYTVLIQSLCKHERLEEATRVFVEMQRNGCQADLVTY 343
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF---RCLEKPREILGLFDRMIE 307
+T+I C+ G+++ Y +L EM ++G P+ + Y E+ E L + M +
Sbjct: 344 STLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMVAHEKKEELEECKELVNEMQK 403
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
G P + Y ++R + G ++ +W +ME G SP + +++ +++G L
Sbjct: 404 IGCAPDLSIYNTVIRLACKLGEVKEGVRLWNEMESSGLSPSIDTFVIMINGFLEQGCLVE 463
Query: 368 ARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
A +Y +EM +GL A P+ +L+ L E+
Sbjct: 464 ACEYFKEMVGRGLFAAPQYGTLKELMNSLLRAEK 497
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 114/302 (37%), Gaps = 48/302 (15%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
YN+++ + + +++L+ M+ PN ++ ++ + + EA F +
Sbjct: 272 VYNNLLGGYAQADKMGDAYDLLKEMRRKGCE-PNATSYTVLIQSLCKHERLEEATRVFVE 330
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G + D V+Y L+ C++ + EL + F V IY I+
Sbjct: 331 MQRNGCQADLVTYSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQV------IYQHIMVA 384
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K +C+E EM K G DL Y+ + + CK G+ + V+L+ EM+ G+
Sbjct: 385 HEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEVKEGVRLWNEMESSGLSPS 444
Query: 212 VVAYNTVIRAV---------------GVSEGVDFAMRVYREMREM--------------- 241
+ + +I V G+ FA Y ++E+
Sbjct: 445 IDTFVIMINGFLEQGCLVEACEYFKEMVGRGL-FAAPQYGTLKELMNSLLRAEKLEMAKD 503
Query: 242 ---------GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
GCQ +V I L G V+EA + M K +P T+ R L
Sbjct: 504 AWNCITASKGCQLNVSAWTIWIHALFSKGHVKEACSFCIAMMDKDLMPQPDTFAKLMRGL 563
Query: 293 EK 294
+K
Sbjct: 564 KK 565
>gi|15241508|ref|NP_196986.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173968|sp|Q9LEQ7.1|PP382_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g14820, mitochondrial; Flags: Precursor
gi|9755750|emb|CAC01881.1| putative protein [Arabidopsis thaliana]
gi|332004697|gb|AED92080.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 177/385 (45%), Gaps = 17/385 (4%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
E L + + K A FF W F H + TYNS++ IL K +F+ +++ M
Sbjct: 165 EVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM--GT 222
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
+ TF I K + A +A+G F + ++ K V N L+D+L K EA
Sbjct: 223 KGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEA 282
Query: 121 QELCFGENKNVGFSGLVEMNKTKI--YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
Q L F L E + Y ++L GW ++ + W +M G+ D+
Sbjct: 283 QVL---------FDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIV 333
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
++++ ++ + +S K A+KL+ MK KG +V +Y +IR ++ A+ + +M
Sbjct: 334 AHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 393
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---P 295
+ G QP +I ++ Y +L EM +KG PD TY+ + + P
Sbjct: 394 VDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP 453
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
++++MI++ I P + T+ M+++ + VW +M + G PD+ +Y L
Sbjct: 454 EHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVL 513
Query: 356 VDALIDKGMLDMARKYDEEMFAKGL 380
+ LI +G A +Y EEM KG+
Sbjct: 514 IRGLISEGKSREACRYLEEMLDKGM 538
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 133/312 (42%), Gaps = 35/312 (11%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A + K+A+ F ++ F +T N ++D LG+ + L ++K+ + PN
Sbjct: 241 AKERKKAVGIFELMKK-YKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFT--PNM 297
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV-----------DALCEYKH 116
T+ ++ + + EA +N + + GLK ++ N++ DA+ + H
Sbjct: 298 MTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLF-H 356
Query: 117 VIEAQELC------------FGENKNVG-----FSGLVEMN---KTKIYNMILRGWFKMS 156
V++++ C F + ++ F +V+ +Y ++ G+
Sbjct: 357 VMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQK 416
Query: 157 WWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
E +EM ++G D +Y+ + +M P ++Y +M + I+ + +N
Sbjct: 417 KLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFN 476
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
++++ V+ + V+ EM + G P + +I+ L G+ REA L EM K
Sbjct: 477 MIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDK 536
Query: 277 GCVPDVITYHCF 288
G +I Y+ F
Sbjct: 537 GMKTPLIDYNKF 548
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 173/379 (45%), Gaps = 14/379 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTD--TYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
C A A F ++ H T D TY S+I+ LG+ D ++ L +M D +
Sbjct: 455 CKAQRLDDACSIFEGLD---HKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLD-ANQ 510
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQEL 123
IPN + + + + + +N++ G ++ N IE
Sbjct: 511 IPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRA 570
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F E KN+GF + + Y +++ G K + + E + M ++G V D +Y+
Sbjct: 571 LFQEIKNLGF-----IPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTV 625
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D CKSGK KA +L +EMK KG + VV Y +VI + + +D A ++ E + G
Sbjct: 626 IDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGI 685
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LG 300
+ +VV +++I + GR+ EAY ++ E+ +KG P+V T++C L K EI L
Sbjct: 686 ELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALV 745
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
F M + P TY +L+ + FV W++M++ G P+ F Y ++ L
Sbjct: 746 CFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLA 805
Query: 361 DKGMLDMARKYDEEMFAKG 379
G + A E+ KG
Sbjct: 806 KAGNIVEADTLFEKFKEKG 824
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 165/385 (42%), Gaps = 47/385 (12%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN ID GK + D++W H MK N + + T+ M A +NEA+ F +
Sbjct: 273 YNVCIDCFGKAGKVDMAWKXFHEMKAN-GLVLDDVTYTSMIGVLCKADRLNEAVELFEHM 331
Query: 94 DEF-GLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
D+ + +Y ++ +A L + + +V YN IL
Sbjct: 332 DQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVS------YNCILSCL 385
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
+ + + +EEM K+ + +L +Y+I +D++CK+GK A+ + MK G+ +V
Sbjct: 386 GRKGQVDEALKKFEEM-KKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNV 444
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY----- 267
+ N ++ + ++ +D A ++ + C+P VT ++I+ L +GRV EAY
Sbjct: 445 ITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQ 504
Query: 268 ------------------------------AVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
+ EM + GC PD++ + + C+ K E
Sbjct: 505 MLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGE 564
Query: 298 I---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
I LF + G P +Y +L+ + GF + ++ M+E GC D AYN
Sbjct: 565 IEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNT 624
Query: 355 LVDALIDKGMLDMARKYDEEMFAKG 379
++D G ++ A + EEM KG
Sbjct: 625 VIDGFCKSGKVNKAYQLLEEMKTKG 649
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 163/363 (44%), Gaps = 12/363 (3%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D A+ +F W E H + YNS++ ++ + +F+ ++ M N+
Sbjct: 109 DVNNAVNYFRWAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTC 168
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGEN 128
I+ ++ + + EA + + + S Y NL+ AL + + F +
Sbjct: 169 IEIVLS-FIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDS-DCMLTLFQQM 226
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
+ +G++ V + + ++R + + +EM + D+ Y++ +D
Sbjct: 227 QELGYAVNVHL-----FTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFG 281
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
K+GK A K + EMK G+ +D V Y ++I + ++ ++ A+ ++ M + P
Sbjct: 282 KAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAY 341
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRM 305
NT+I G+ +AY++L +KGC+P V++Y+C CL + ++ L F+ M
Sbjct: 342 AYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM 401
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
+ I P + TY +++ + G L VV M++ G P+ N +VD L L
Sbjct: 402 KKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRL 460
Query: 366 DMA 368
D A
Sbjct: 461 DDA 463
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 123/274 (44%), Gaps = 12/274 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + +A + ++T H T TY SVID L K D ++ L K +
Sbjct: 630 CKSGKVNKAYQLLEEMKTKGH-EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIEL- 687
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELC 124
N + + + ++EA +L + GL V N L+DAL + + + EA +C
Sbjct: 688 NVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEAL-VC 746
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F K++ + Y++++ G K+ + K FW+EM K+G ++ +Y+ +
Sbjct: 747 FQSMKDLKCTP-----NYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMI 801
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ K+G +A L+++ K+KG D YN +I + + A R++ E R GC
Sbjct: 802 SGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCS 861
Query: 245 PSVVTCNTVIKLLCENGRVREAY---AVLAEMPK 275
TC ++ L + + +A AVL E K
Sbjct: 862 IYTKTCVVLLDSLHKAECIEQAAIVGAVLRETAK 895
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 3/170 (1%)
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
AYN+++ + + + ++ EM G PS TC ++ ++ ++REA+ + M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191
Query: 274 PKKGCVPDVITYHCFFRCLEKPRE---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
K P Y L R+ +L LF +M E G + + L+R F R G +
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ +M+ PD YN +D G +DMA K EM A GL
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGL 301
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 144/342 (42%), Gaps = 36/342 (10%)
Query: 35 NSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLD 94
N+ +D + K E + L +K N IP+ ++ I+ V A +EA F +
Sbjct: 553 NTYMDCVFKAGEIEKGRALFQEIK-NLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMK 611
Query: 95 EFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG-----------FSGLVEMNKT 142
E G + D +Y ++D C+ V +A +L E K G GL ++++
Sbjct: 612 EQGCVLDTRAYNTVIDGFCKSGKVNKAYQL-LEEMKTKGHEPTVVTYGSVIDGLAKIDRL 670
Query: 143 K-------------------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
IY+ ++ G+ K+ + EE+ ++G+ ++++++
Sbjct: 671 DEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCL 730
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D + K+ + +A+ ++ MK + + Y+ +I + + A ++EM++ G
Sbjct: 731 LDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGF 790
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE---KPREILG 300
+P+V T T+I L + G + EA + + +KG V D Y+ L + +
Sbjct: 791 KPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYR 850
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE 342
LF+ G T V+LL + + +V + E
Sbjct: 851 LFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRE 892
>gi|225430190|ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial [Vitis vinifera]
gi|296081989|emb|CBI20994.3| unnamed protein product [Vitis vinifera]
Length = 597
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 179/380 (47%), Gaps = 16/380 (4%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLI-HRMK--DNPSSIPNHA 68
K F W F + +NS+ID+L K FD +W L+ R++ + P + ++
Sbjct: 118 KPLFTLFRWAMKQPGFESSMTLFNSMIDVLAKSRAFDSAWLLVLDRIEGGEEPELVSSN- 176
Query: 69 TFRIMFKRYVTAHLVNEAMGTFN---KLDEFGLKDE--VSYCNLVDALCEYKHVIEAQEL 123
TF ++ +RY A + A+ TF LD +D + L+D+LC+ HV A E
Sbjct: 177 TFAVLIRRYARAGMTLSAIRTFEFAFSLDSIRDRDSEWSLFKILLDSLCKEGHVRVASEY 236
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + + + S + + ++YN++L GWF+ + + W M + V + +Y
Sbjct: 237 -FDQQRGLDPSWVPSI---RVYNVLLNGWFRSRKLKRAEQLWRTMKRENVKPTVVTYGTL 292
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
++ C+ + KA++L EM+ KGI+ +V+ YN +I ++ + AM +
Sbjct: 293 VEGYCRMRRSEKAIELVGEMRGKGIEPNVIVYNPIIDSLAEAGRFKEAMGMMERCLVSET 352
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE---KPREILG 300
P++ T N+++K C+ G + A VL M +G P + TY+ FFR K E +
Sbjct: 353 GPTISTYNSLVKGFCKAGDLVGASKVLKMMISRGFDPTLTTYNYFFRYFSRCGKTEEGMN 412
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L+ +MIESG P TY +L++ L V K+M GC D LV L
Sbjct: 413 LYTKMIESGHTPDRLTYHLLIKMMCEEERLDLAVQVSKEMRARGCDLDLATSTMLVHLLC 472
Query: 361 DKGMLDMARKYDEEMFAKGL 380
L+ A E+M +G+
Sbjct: 473 KMHRLEEAFAEFEDMIRRGI 492
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 12/196 (6%)
Query: 102 VSYCNLVDALCE---YKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWW 158
+ Y ++D+L E +K + E C S YN +++G+ K
Sbjct: 322 IVYNPIIDSLAEAGRFKEAMGMMERCLVSETGPTIS---------TYNSLVKGFCKAGDL 372
Query: 159 GKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTV 218
+ + M RG L +Y+ + + GK + + LY +M + G D + Y+ +
Sbjct: 373 VGASKVLKMMISRGFDPTLTTYNYFFRYFSRCGKTEEGMNLYTKMIESGHTPDRLTYHLL 432
Query: 219 IRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGC 278
I+ + E +D A++V +EMR GC + T ++ LLC+ R+ EA+A +M ++G
Sbjct: 433 IKMMCEEERLDLAVQVSKEMRARGCDLDLATSTMLVHLLCKMHRLEEAFAEFEDMIRRGI 492
Query: 279 VPDVITYHCFFRCLEK 294
VP +T+ L K
Sbjct: 493 VPQYLTFERMNNALRK 508
>gi|115463377|ref|NP_001055288.1| Os05g0355200 [Oryza sativa Japonica Group]
gi|55168028|gb|AAV43896.1| unknown protein [Oryza sativa Japonica Group]
gi|55168069|gb|AAV43937.1| unknown protein [Oryza sativa Japonica Group]
gi|113578839|dbj|BAF17202.1| Os05g0355200 [Oryza sativa Japonica Group]
Length = 632
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 172/376 (45%), Gaps = 24/376 (6%)
Query: 17 FFNWVET----DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
FF W F HTT TY ++ ILGK +F LI M + + F+I
Sbjct: 203 FFRWAAAAAAASGGFAHTTITYCKMVHILGKARQFQSMVALIQEMGKEGALCMD--AFKI 260
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNV 131
K + A + A+G F + G D V S+ L+ AL AQE G N
Sbjct: 261 AIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVAL--------AQE-GLGREANQ 311
Query: 132 GFSGLVEMNKTKI--YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
F + + + Y ++ W + W EM + G+ D+ ++ ++ + +
Sbjct: 312 VFDRMRDRYAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLR 371
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
+ +AVK+++ MK KG +V Y +IR +D AMR + EM+++GCQP V T
Sbjct: 372 GQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVAT 431
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMI 306
++ R+ A+L EM +KGC PD TY+ + L P + ++ +MI
Sbjct: 432 YTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMI 491
Query: 307 ESGIRPKMDTYVMLLRKF--GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
+ G+ P + TY M+++ + G ++ VW++M G PD +Y ++ I G
Sbjct: 492 KKGLEPTIHTYNMMMKSYFLGGRNYMMGC-AVWEEMHRKGICPDVNSYTVFINGHIRHGR 550
Query: 365 LDMARKYDEEMFAKGL 380
+ A KY EEM KG+
Sbjct: 551 PEEACKYIEEMIQKGM 566
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 96/227 (42%), Gaps = 10/227 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
P+ M + + EA+ F + G V +Y L+ C+ + A
Sbjct: 357 PDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMR- 415
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
CF E ++VG V Y +L G+ + EEM ++G D +Y+
Sbjct: 416 CFEEMQDVGCQPDVA-----TYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNAL 470
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM--RVYREMREM 241
+ ++ P A ++YK+M KKG++ + YN ++++ + G ++ M V+ EM
Sbjct: 471 IKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLG-GRNYMMGCAVWEEMHRK 529
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
G P V + I +GR EA + EM +KG I Y+ F
Sbjct: 530 GICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKF 576
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 175/357 (49%), Gaps = 23/357 (6%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN++ID + K + +++L M S P+ T+ + + +N+A+G FNK+
Sbjct: 199 YNTIIDSMCKVKLVNEAFDLYSEMVSKGIS-PDVVTYSALISGFCILGKLNDAIGLFNKM 257
Query: 94 DEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI------YN 146
+ +V ++ LVD C+ V EA KNV L M K I Y
Sbjct: 258 ISEEINPDVYTFSILVDGFCKEGRVKEA--------KNV----LAMMMKQGIKPDVVTYC 305
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++ G+ + K + + M + GV ++ SY+I ++ CK K +A+ L+KEM K
Sbjct: 306 SLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCK 365
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
I DVV YN++I + S + +A+++ EM + G +T N+++ LC+N +V +A
Sbjct: 366 NIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKA 425
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRK 323
A+L +M +G PD+ TY L K ++ +F+ ++ G + TY ++++
Sbjct: 426 IALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQG 485
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
F + KME+ GC P+ Y ++ +L +K DMA K EM A+GL
Sbjct: 486 FCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGL 542
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 118/242 (48%), Gaps = 9/242 (3%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y ++ G K+ + +D + V ++ Y+ +D MCK +A LY EM
Sbjct: 164 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 223
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
KGI DVV Y+ +I + ++ A+ ++ +M P V T + ++ C+ GRV+
Sbjct: 224 SKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVK 283
Query: 265 EAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPKMDTYV 318
EA VLA M K+G PDV+TY +C + + K + I F+ M + G+ + +Y
Sbjct: 284 EAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSI---FNTMAQGGVTANVQSYN 340
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+++ F + + ++K+M PD YN+L+D L G + A K +EM +
Sbjct: 341 IMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDR 400
Query: 379 GL 380
G+
Sbjct: 401 GV 402
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 115/241 (47%), Gaps = 3/241 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+N+++ + ++ + + K+G + + + + +C G+ +A+ + ++
Sbjct: 94 FNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVV 153
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
G ++ V Y T+I + A+++ R + QP+VV NT+I +C+ V
Sbjct: 154 ALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVN 213
Query: 265 EAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLL 321
EA+ + +EM KG PDV+TY F L K + +GLF++MI I P + T+ +L+
Sbjct: 214 EAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILV 273
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
F + G ++ V M + G PD Y +L+D ++ A+ M G++
Sbjct: 274 DGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVT 333
Query: 382 A 382
A
Sbjct: 334 A 334
>gi|125551971|gb|EAY97680.1| hypothetical protein OsI_19602 [Oryza sativa Indica Group]
Length = 586
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 172/376 (45%), Gaps = 24/376 (6%)
Query: 17 FFNWVET----DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
FF W F HTT TY ++ ILGK +F LI M + + F+I
Sbjct: 203 FFRWAAAAAAASGGFAHTTITYCKMVHILGKARQFQSMVALIQEMGKEGALCMD--AFKI 260
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNV 131
K + A + A+G F + G D V S+ L+ AL AQE G N
Sbjct: 261 AIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVAL--------AQE-GLGREANQ 311
Query: 132 GFSGLVEMNKTKI--YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
F + + + Y ++ W + W EM + G+ D+ ++ ++ + +
Sbjct: 312 VFDRMRDRYAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLR 371
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
+ +AVK+++ MK KG +V Y +IR +D AMR + EM+++GCQP V T
Sbjct: 372 GQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVAT 431
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMI 306
++ R+ A+L EM +KGC PD TY+ + L P + ++ +MI
Sbjct: 432 YTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMI 491
Query: 307 ESGIRPKMDTYVMLLRKF--GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
+ G+ P + TY M+++ + G ++ VW++M G PD +Y ++ I G
Sbjct: 492 KKGLEPTIHTYNMMMKSYFLGGRNYMMGC-AVWEEMHRKGICPDVNSYTVFINGHIRHGR 550
Query: 365 LDMARKYDEEMFAKGL 380
+ A KY EEM KG+
Sbjct: 551 PEEACKYIEEMIQKGM 566
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 130/318 (40%), Gaps = 46/318 (14%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A + K A+ F + T F +++N ++ L + + + RM+D + P+
Sbjct: 268 AGEIKNAVGVFEMMRTH-GFDDGVESFNCLLVALAQEGLGREANQVFDRMRDRYA--PDL 324
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL--- 123
++ + + A + EA +N++ E GLK D V + +++ L + EA ++
Sbjct: 325 RSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFEL 384
Query: 124 -------------------------------CFGENKNVGFSGLVEMNKTKIYNMILRGW 152
CF E ++VG V Y +L G+
Sbjct: 385 MKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDV-----ATYTCLLVGY 439
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
+ EEM ++G D +Y+ + ++ P A ++YK+M KKG++ +
Sbjct: 440 GNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTI 499
Query: 213 VAYNTVIRAVGVSEGVDFAM--RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
YN ++++ + G ++ M V+ EM G P V + I +GR EA +
Sbjct: 500 HTYNMMMKSYFLG-GRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYI 558
Query: 271 AEMPKKGCVPDVITYHCF 288
EM +KG I Y+ F
Sbjct: 559 EEMIQKGMKTPQIDYNKF 576
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 177/370 (47%), Gaps = 13/370 (3%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T T+ ++I+ L K +F + L M P+ T+ + A G
Sbjct: 167 TIVTFTTLINWLCKVGKFAQAMELFDDMVARGCR-PDVYTYTTIINGLCKIGETAAAAGL 225
Query: 90 FNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
K++E G + + V+Y ++D+ + + V EA ++ F K G S + YN +
Sbjct: 226 LKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDI-FSYMKVKGISPDIF-----TYNSL 279
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
++G S W + EM ++ D+ ++++ +D +CK GK +A + K M + G+
Sbjct: 280 IQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGV 339
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ DVV Y++++ + V A +++ M GC+P V + N +I C+ R+ EA
Sbjct: 340 EPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQ 399
Query: 269 VLAEMPKKGCVPDVITYHCFFR--C-LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ EM +G P+ ++Y+ C L RE LF M +G P + TY +LL F
Sbjct: 400 LFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFC 459
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
+ G+ F +++ M+ P+ YN L+DA+ G L ARK E+F KGL +P
Sbjct: 460 KQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGL--QPN 517
Query: 386 EELGTKLVQG 395
++ T ++ G
Sbjct: 518 AQIYTTIING 527
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 175/417 (41%), Gaps = 49/417 (11%)
Query: 6 CYANDWKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C + +A+E F+ V C TY ++I+ L K E + L+ +M++
Sbjct: 179 CKVGKFAQAMELFDDMVARGCR--PDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQ- 235
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
PN T+ + + VNEA+ F+ + G+ ++ +Y +L+ LC + EA L
Sbjct: 236 PNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASAL 295
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
E +++ M +N+++ K + + + M + GV D+ +YS
Sbjct: 296 -LNEMRSLNI-----MPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSL 349
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
M + +A KL+ M KG K DV +YN +I + +D A +++ EM G
Sbjct: 350 MYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGL 409
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF--------------- 288
P+ V+ NT+I LC+ G +REA + M G +P++ TY
Sbjct: 410 TPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFR 469
Query: 289 -FRCLE----KP------------------REILGLFDRMIESGIRPKMDTYVMLLRKFG 325
FR ++ KP R+ LF + G++P Y ++
Sbjct: 470 LFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLC 529
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ G L ++ MEE GC PDE +YN ++ + A + EM KG A
Sbjct: 530 KEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIA 586
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 139/283 (49%), Gaps = 13/283 (4%)
Query: 124 CFGENKNV--GFSGLVEMNKTKIYNMI-----LRGWF-KMSWWGKCREFWEEMDKRGVVK 175
CF + V FS L ++ K + I L W K+ + + E +++M RG
Sbjct: 142 CFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRP 201
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
D+++Y+ ++ +CK G+ A L K+M++ G + +VV Y+T+I + V+ A+ ++
Sbjct: 202 DVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIF 261
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE 293
M+ G P + T N++I+ LC + +EA A+L EM +PD++T++ C E
Sbjct: 262 SYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKE 321
Query: 294 -KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
K E G+ M E G+ P + TY L+ + + ++ M GC PD F+Y
Sbjct: 322 GKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSY 381
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
N L++ +D A++ EM +GL+ P L+ G
Sbjct: 382 NILINGYCKVKRIDEAKQLFNEMIHQGLT--PNNVSYNTLIHG 422
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 7/221 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ ++ I+ Y ++EA FN++ GL + VSY L+ LC+ + EA+ L
Sbjct: 376 PDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNL 435
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ N L Y+++L G+ K ++GK + M +L Y+I
Sbjct: 436 FKNMHTNGNLPNLFT------YSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNIL 489
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D MCKSG A KL+ E+ KG++ + Y T+I + +D A+ +R M E GC
Sbjct: 490 IDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGC 549
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
P ++ N +I+ + A ++ EM KG + DV T
Sbjct: 550 PPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 4/199 (2%)
Query: 165 WEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAV-KLYKEMKKKGIKMDVVAYNTVIRAVG 223
+ M R + + ++ + + K G+ + V L K+M+ G+ ++ + +I
Sbjct: 85 FNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFS 144
Query: 224 VSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVI 283
+ VD A V ++ ++G QP++VT T+I LC+ G+ +A + +M +GC PDV
Sbjct: 145 HLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVY 204
Query: 284 TYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
TY L K E GL +M E+G +P + TY ++ + + ++ M
Sbjct: 205 TYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYM 264
Query: 341 EELGCSPDEFAYNALVDAL 359
+ G SPD F YN+L+ L
Sbjct: 265 KVKGISPDIFTYNSLIQGL 283
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 6/188 (3%)
Query: 212 VVAYNTVIRA-VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
++ + ++ A V + + D + + ++M G P++ T + +I RV A++VL
Sbjct: 97 IIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVL 156
Query: 271 AEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
A++ K G P ++T+ L K + + LFD M+ G RP + TY ++ +
Sbjct: 157 AKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKI 216
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREE 387
G + KKMEE GC P+ Y+ ++D+ ++ A M KG+S P
Sbjct: 217 GETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGIS--PDIF 274
Query: 388 LGTKLVQG 395
L+QG
Sbjct: 275 TYNSLIQG 282
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 166/342 (48%), Gaps = 12/342 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ + A+ K++E G K + V+Y ++D+LC+ + V EA +
Sbjct: 43 PDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDF 102
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F E G V Y+ IL G+ + + +++M +R V+ + +++I
Sbjct: 103 -FSEMVKEGIPPDV-----FTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTIL 156
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D +CK +A +++ M +KG++ DV YN ++ +D A +++ M GC
Sbjct: 157 IDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGC 216
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--C-LEKPREILG 300
P+V + N +I C++GR+ EA +LAEM K PD+ TY R C + +P+E
Sbjct: 217 APNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQE 276
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L M G+ P + TY ++L + G L F + K M+E P+ F Y L++ +
Sbjct: 277 LLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMC 336
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQS 402
G L+ AR+ +F KG+ +P T ++ G L G S
Sbjct: 337 TFGKLEAARELFSNLFVKGI--QPTVVTYTVMISGLLKGGLS 376
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 165/356 (46%), Gaps = 17/356 (4%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN++ID L K + + M P+ T+ + + VNEA F ++
Sbjct: 83 YNTIIDSLCKDRLVTEAMDFFSEMVKEGIP-PDVFTYSSILHGFCNLGRVNEATSLFKQM 141
Query: 94 DEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
E + ++V++ L+D LC+ + + EA L F G V YN ++ G+
Sbjct: 142 VERNVIPNKVTFTILIDGLCKKRMISEAW-LVFETMTEKGLEPDV-----YTYNALVDGY 195
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
S + ++ + MD++G ++ SY+I ++ CKSG+ +A L EM K + D+
Sbjct: 196 CSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDI 255
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
Y+T++R A + +EM G P+++T + V+ LC++G + EA+ +L
Sbjct: 256 FTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKA 315
Query: 273 MPKKGCVPDVITYH------CFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
M + P++ Y C F LE RE LF + GI+P + TY +++ +
Sbjct: 316 MQESKIEPNIFIYTILIEGMCTFGKLEAARE---LFSNLFVKGIQPTVVTYTVMISGLLK 372
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
G ++++M GC P+ YN ++ + G A + EEM KG SA
Sbjct: 373 GGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSA 428
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 115/221 (52%), Gaps = 3/221 (1%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M K G+ L +++ + +C K AVKL+ EM K G + DV+ Y+T+I +
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
A+++ ++M E GC+P+VV NT+I LC++ V EA +EM K+G PDV TY
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120
Query: 288 F---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
F L + E LF +M+E + P T+ +L+ + + ++V++ M E G
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
PD + YNALVD + +D A+K M KG + R
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVR 221
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 124/240 (51%), Gaps = 3/240 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+N +L G + + ++EM K G D+ +YS ++ +CK G A++L K+M+
Sbjct: 13 FNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKME 72
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+KG K +VVAYNT+I ++ V AM + EM + G P V T ++++ C GRV
Sbjct: 73 EKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVN 132
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLL 321
EA ++ +M ++ +P+ +T+ L K R I +F+ M E G+ P + TY L+
Sbjct: 133 EATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALV 192
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ + ++ M+ GC+P+ +YN L++ G +D A+ EM K L+
Sbjct: 193 DGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLT 252
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 148/322 (45%), Gaps = 36/322 (11%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+S++ + + +L +M + + IPN TF I+ +++EA F
Sbjct: 117 TYSSILHGFCNLGRVNEATSLFKQMVER-NVIPNKVTFTILIDGLCKKRMISEAWLVFET 175
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL--------CFGENK--NVGFSG------ 135
+ E GL+ +V +Y LVD C + EAQ+L C + N+ +G
Sbjct: 176 MTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGR 235
Query: 136 -------LVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L EM+ + Y+ ++RG+ ++ + +E +EM G++ +L +YSI
Sbjct: 236 IDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSI 295
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D +CK G +A +L K M++ I+ ++ Y +I + ++ A ++ + G
Sbjct: 296 VLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKG 355
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC----FFRCLEKPREI 298
QP+VVT +I L + G EA + EM GC+P+ TY+ F R + P +
Sbjct: 356 IQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAV 415
Query: 299 LGLFDRMIESGIRPKMDTYVML 320
L + M+ G T+ ML
Sbjct: 416 -RLIEEMVGKGFSADSSTFRML 436
>gi|357129397|ref|XP_003566348.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Brachypodium distachyon]
Length = 649
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 170/371 (45%), Gaps = 14/371 (3%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKR 76
FF W F HT TY ++ ILGK +F+ L+ M + + F+I K
Sbjct: 224 FFQWAAASDEFEHTPVTYCKMLHILGKARQFETMVALVQEMGKAGALCMD--AFKIAIKS 281
Query: 77 YVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSG 135
+ A + A+G F + G D V S+ L+ AL + EA + F ++
Sbjct: 282 FAAAGEIKNAVGVFEMMRVHGFDDGVESFNCLLVALAQEGLGKEAARV-FDRMRDQYTPD 340
Query: 136 LVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK 195
L + Y ++ W + W +M ++G+ D+ ++ +D + + + +
Sbjct: 341 L------RSYTALMLAWCNARNLVEAGRVWNDMLEKGMKPDVVVHNTMIDGLLRGQRRPE 394
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
AVK+++ MK KG +V Y +IR +D AMR + EM+ GCQP V T ++
Sbjct: 395 AVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKLDMAMRCFEEMQVAGCQPEVATYTCLLV 454
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRP 312
R+ A+L EM +KGC PD TY+ + L P + + ++ +MI G+ P
Sbjct: 455 GYGNAKRMDRVTAMLEEMAQKGCPPDGRTYNALIKLLTNRNMPDDAVRIYKKMITKGLEP 514
Query: 313 KMDTYVMLLRKFGRWGFLRPV-FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
+ TY M+++ + G + VW++M G PD +Y ++ I G A K+
Sbjct: 515 TIHTYNMMMKSYFLGGRNYAMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPAEACKF 574
Query: 372 DEEMFAKGLSA 382
EEM KG+ A
Sbjct: 575 LEEMIQKGMKA 585
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 10/207 (4%)
Query: 85 EAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK 143
EA+ F + G V +Y L+ C+ + A CF E + G V
Sbjct: 394 EAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKLDMAMR-CFEEMQVAGCQPEVA----- 447
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
Y +L G+ + EEM ++G D +Y+ + ++ P AV++YK+M
Sbjct: 448 TYTCLLVGYGNAKRMDRVTAMLEEMAQKGCPPDGRTYNALIKLLTNRNMPDDAVRIYKKM 507
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAM--RVYREMREMGCQPSVVTCNTVIKLLCENG 261
KG++ + YN ++++ + G ++AM V+ EM G P V + I +G
Sbjct: 508 ITKGLEPTIHTYNMMMKSYFLG-GRNYAMGCAVWEEMHRKGICPDVNSYTVFINGHIRHG 566
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCF 288
R EA L EM +KG I Y+ F
Sbjct: 567 RPAEACKFLEEMIQKGMKAPQIDYNKF 593
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 160/328 (48%), Gaps = 22/328 (6%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P++ T+ + + + V E F+++ GLK DEV+Y L+D C+ ++ A L
Sbjct: 396 PDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSL 455
Query: 124 CFGENKNVGFSGLVEMNKTK---IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+ +V+M T Y ++ G K E +EM K+G+ ++ Y
Sbjct: 456 ---------HNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIY 506
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ ++ +CK+G +A+KL KEM+ GI D + Y TVI A +D A ++ +EM +
Sbjct: 507 NSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLD 566
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------HCFFRCLEK 294
G QP+VVT N ++ C G + + +L M +KG VPD ITY HC +
Sbjct: 567 RGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNT 626
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
+I + RM G+ P +TY +L++ + L+ + ++K+M E G P +YNA
Sbjct: 627 TTKI---YKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNA 683
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLSA 382
L+ K AR+ EEM GL A
Sbjct: 684 LIKRFYKKRKFXEARELFEEMRGHGLVA 711
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 168/400 (42%), Gaps = 40/400 (10%)
Query: 9 NDWKRALEFFNW--------VETDCHFTHTTDT---------------YNSVIDILGKFF 45
ND+ L FF+W +E C H NS ++I K
Sbjct: 114 NDYNLVLAFFDWARVRREPSLEARCIIIHIAVVSNDLRLAHELVHDYFLNSKLEIGVKMT 173
Query: 46 EFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYC 105
+F + LI+ K PN F I F+ V ++EA +KL +GL V C
Sbjct: 174 QF--THRLIYTYK---YWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSC 228
Query: 106 NLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFW 165
N L + E E+ G S T YN+I+ ++ +
Sbjct: 229 NAF--LSRIANNSEGIEMAIKVFCEYGISW-----NTTSYNIIIYSLCRLGKVKEAHRLL 281
Query: 166 EEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVS 225
+MD R D+ SYS +D C G+ KA+KL +M+ KG+K + YN++I +
Sbjct: 282 MQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLL-CK 340
Query: 226 EGVDF-AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
G F A +V REM P V T+I + G VR A EM K PD IT
Sbjct: 341 IGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYIT 400
Query: 285 YHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKME 341
Y + + +++ LF MI G++P TY L+ + + G + F + +M
Sbjct: 401 YTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMV 460
Query: 342 ELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
++G +P+ Y AL+D L G LD A + +EM KGL
Sbjct: 461 QMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQ 500
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 120/284 (42%), Gaps = 9/284 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A + A N + T TY ++ID L K E D + L+ M+ +
Sbjct: 444 CKAGEMVNAFSLHNEM-VQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQL- 501
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELC 124
N + M A + +A+ +++ G+ D ++Y ++DA C + +A +L
Sbjct: 502 NVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKL- 560
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
E + G V +N+++ G+ + M ++G+V D +Y+ M
Sbjct: 561 LQEMLDRGLQPTV-----VTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLM 615
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
C K+YK M+ +G+ D YN +I+ + + A +Y+EM E G
Sbjct: 616 KQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYV 675
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
P+V + N +IK + + EA + EM G V D Y+ F
Sbjct: 676 PTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFF 719
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 177/395 (44%), Gaps = 53/395 (13%)
Query: 38 IDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG 97
I +LGK F+ + P+ TF + + EA+G FN++ G
Sbjct: 147 ISVLGKMFKLGIQ--------------PDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192
Query: 98 LK-DEVSYCNLVDALCE-------------------------YKHVIEAQELCFGENKNV 131
+ D +SY +++ LC+ Y +I++ LC N
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDS--LCKDTLVND 250
Query: 132 GFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
L EM I Y+ IL G+ + + + EM R V+ + +++I +D
Sbjct: 251 AMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVD 310
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
+CK G +A +++ M KKG + + YN ++ ++ +D A +V M + GC P
Sbjct: 311 GLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAP 370
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLF 302
V + N +I C+ R+ EA ++L EM +K PD +TY + L +P+E L LF
Sbjct: 371 VVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLF 430
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
M SG+ P + TY LL + G L + K M+E PD YN L++ +
Sbjct: 431 KEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIA 490
Query: 363 GMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGL 397
G L++A++ ++FA G+ +P T +++G L
Sbjct: 491 GKLEVAKELFSKLFADGI--QPTIRTYTIMIKGLL 523
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 137/293 (46%), Gaps = 45/293 (15%)
Query: 91 NKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
N++D FG+ V N L++ LC HV+
Sbjct: 116 NQMDLFGVTHNVYSLNILINCLCRLNHVV------------------------------- 144
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
F +S GK M K G+ D +++ ++ C G+ +AV L+ EM ++G +
Sbjct: 145 ---FAISVLGK-------MFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQ 194
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
DV++Y+TVI + S A+++ R+M E GC+P++V T+I LC++ V +A +
Sbjct: 195 PDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDL 254
Query: 270 LAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
L+EM +G PDV+TY F L E LF+ M+ + P T+ +L+ +
Sbjct: 255 LSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCK 314
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
G + V++ M + G P+ + YNAL+D +D A+K + M KG
Sbjct: 315 EGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKG 367
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 186/413 (45%), Gaps = 41/413 (9%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + K A+ FN + H +Y++VI+ L K ++ L+ +M++ P
Sbjct: 173 CIEGEIKEAVGLFNEMVRRGHQPDVI-SYSTVINGLCKSGNTSMALQLLRKMEEKGCK-P 230
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL- 123
N + + LVN+AM +++ + G+ D V+Y ++ C H+ EA L
Sbjct: 231 NLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILF 290
Query: 124 --CFGEN---KNVGFSGLVE-----------------MNK------TKIYNMILRGWFKM 155
G N V F+ LV+ M K YN ++ G+
Sbjct: 291 NEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLN 350
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
+ + ++ + M +G +HSY+I ++ CK + +A L EM +K + D V Y
Sbjct: 351 NQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTY 410
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
+T+++ + A+ +++EM G P ++T +T++ LC++G + EA +L M +
Sbjct: 411 STLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQE 470
Query: 276 KGCVPDVITYHCFFRC------LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
PD++ Y+ LE +E LF ++ GI+P + TY ++++ + G
Sbjct: 471 SKIEPDIVLYNILIEGMFIAGKLEVAKE---LFSKLFADGIQPTIRTYTIMIKGLLKEGL 527
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ +++KME+ G P+ +YN ++ + A + +EM K SA
Sbjct: 528 SDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSA 580
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 130/267 (48%), Gaps = 22/267 (8%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
PN T+ + Y + ++EA + + + G V SY L++ C+ + + EA+ L
Sbjct: 335 PNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSL 394
Query: 124 CFGENKNVGFSGLVEMNK------TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
LVEM++ T Y+ +++G ++ + ++EM G++ DL
Sbjct: 395 ------------LVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDL 442
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
+YS +D +CK G +A+KL K M++ I+ D+V YN +I + ++ ++ A ++ +
Sbjct: 443 MTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSK 502
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
+ G QP++ T +IK L + G EAY + +M G +P+ +Y+ + + ++
Sbjct: 503 LFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQD 562
Query: 298 ---ILGLFDRMIESGIRPKMDTYVMLL 321
+ L D M+ T+ MLL
Sbjct: 563 SSTAIRLIDEMVGKRFSADSSTFQMLL 589
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 104/251 (41%), Gaps = 40/251 (15%)
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ + K + V L +M G+ +V + N +I + V FA+ V +M ++G
Sbjct: 98 FLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLG 157
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC--------------- 287
QP +T NT+I C G ++EA + EM ++G PDVI+Y
Sbjct: 158 IQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMAL 217
Query: 288 -FFRCLE----KP------------------REILGLFDRMIESGIRPKMDTYVMLLRKF 324
R +E KP + + L M++ GI P + TY +L F
Sbjct: 218 QLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGF 277
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
G L +++ +M P+ + LVD L +GM+ AR E M KG A+P
Sbjct: 278 CSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKG--AEP 335
Query: 385 REELGTKLVQG 395
L+ G
Sbjct: 336 NAYTYNALMDG 346
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 3/188 (1%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A+ + M + + VV + + ++ + + + +M G +V + N +I
Sbjct: 76 ALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILIN 135
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF--RCLE-KPREILGLFDRMIESGIRP 312
LC V A +VL +M K G PD IT++ RC+E + +E +GLF+ M+ G +P
Sbjct: 136 CLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQP 195
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
+ +Y ++ + G + +KMEE GC P+ AY ++D+L +++ A
Sbjct: 196 DVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLL 255
Query: 373 EEMFAKGL 380
EM +G+
Sbjct: 256 SEMVDRGI 263
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 162/358 (45%), Gaps = 50/358 (13%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PNH TF ++ + + + +A+ T +K+ FGL D V+Y L++A C + EA+ L
Sbjct: 207 PNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTL 266
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
K G+V T YN ++ + ++ W + + E M G DL +Y++
Sbjct: 267 LARMKKE----GIVPTRAT--YNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVL 320
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGI-KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+C++GK +A KL EM++ GI DVV YNT++ A + A+ + EMRE G
Sbjct: 321 AAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKG 380
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLF 302
+ S+VT N ++K LC G++ EA L M ++G PDVITY+ K + F
Sbjct: 381 VKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAF 440
Query: 303 ---DRMIESGIRPKMDTYVM------------------LLRKFGRWGFL----------- 330
D M+ SG+ KMDT+ + LLR + GF+
Sbjct: 441 VLMDEMVRSGL--KMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMA 498
Query: 331 --------RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
P +W +M + +P YN L+ L G L A E+ GL
Sbjct: 499 AYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGL 556
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 162/348 (46%), Gaps = 12/348 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++++ + + L+ RMK +P AT+ + Y + +A
Sbjct: 246 TYNTLLNAHCRKGMLGEARTLLARMKKE-GIVPTRATYNTLVSAYARLGWIKQATDVVEA 304
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ FG + ++ +Y L LC+ V EA F + G+V + YN ++
Sbjct: 305 MTAFGFEPDLWTYNVLAAGLCQAGKVDEA----FKLKDEMEQLGIVSPDVV-TYNTLVDA 359
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
FK EEM ++GV L +++I + +C+ G+ +A+ + M ++G+ D
Sbjct: 360 CFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPD 419
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V+ YNT+I A + V A + EM G + T NT++ LC+ R EA +L
Sbjct: 420 VITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLR 479
Query: 272 EMPKKGCVPDVITY----HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
P++G VPD ++Y +F+ KP L L+D MI+ + P + TY L++
Sbjct: 480 APPQRGFVPDEVSYGTVMAAYFKEY-KPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTM 538
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
G L ++ E+G PD+ YN ++ A +G L+ A ++ +M
Sbjct: 539 GKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKM 586
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 154/340 (45%), Gaps = 21/340 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDN--PSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
TYN+++D K + NL+ M++ SS+ H I+ K + EA+G
Sbjct: 352 TYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTH---NIIVKGLCREGQLEEALGRL 408
Query: 91 NKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+ E GL D ++Y L+DA C+ +V +A F + SGL +M+ T N +L
Sbjct: 409 EMMTEEGLTPDVITYNTLIDASCKAGNVAKA----FVLMDEMVRSGL-KMD-TFTLNTLL 462
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
K + + E +RG V D SY M K KP A+ L+ EM K+ +
Sbjct: 463 YNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLT 522
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
+ YNT+I+ + + A+ E+ EMG P T N +I C+ G + +A+
Sbjct: 523 PSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQF 582
Query: 270 LAEMPKKGCVPDVITYH------CFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRK 323
+M + PDV+T + C + LEK + LF+ +E G + + TY L++
Sbjct: 583 HNKMVENSFKPDVVTCNTLMNGLCLYGRLEK---AMKLFESWVEKGKKVDVITYNTLIQA 639
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
+ + + ME G PD F YN L+ AL + G
Sbjct: 640 LCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAG 679
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 113/243 (46%), Gaps = 28/243 (11%)
Query: 135 GLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPW 194
GLV + T YN+I+ + K K +F +M + D+ + + M+ +C G+
Sbjct: 555 GLVPDDTT--YNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLE 612
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
KA+KL++ +KG K+DV+ YNT+I+A+ VD A+R + +M G QP V T N ++
Sbjct: 613 KAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLL 672
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKM 314
L E GR EA +L ++ + G + Y +E +E+G P++
Sbjct: 673 SALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEA-----------VETGKDPEV 721
Query: 315 ---------------DTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
++Y +++ G L+ V +M + G S D Y L++ L
Sbjct: 722 KSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGL 781
Query: 360 IDK 362
I +
Sbjct: 782 IKR 784
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 193 PWKAVKLYKEMKKKG-IKMDVVAYNTVIRAVGVSEGVD--FAMRVYREMREMGCQPSVVT 249
P A +L +++G ++ + A N V+ A+ S ++ + + + P+ T
Sbjct: 152 PHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYT 211
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREILGLFD 303
N ++ C G + +A + L++M G PD +TY HC L + R +L
Sbjct: 212 FNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLA--- 268
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
RM + GI P TY L+ + R G+++ V + M G PD + YN L L G
Sbjct: 269 RMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAG 328
Query: 364 MLDMARKYDEEMFAKGL 380
+D A K +EM G+
Sbjct: 329 KVDEAFKLKDEMEQLGI 345
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 104/254 (40%), Gaps = 7/254 (2%)
Query: 136 LVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVK-DLHSYSIYMDIMCKS--GK 192
L + + + L + ++ + +RG V+ L + + + + +S
Sbjct: 130 LASFPTSALADAALSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTS 189
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
P ++ + + + + +N ++ + A+ +M+ G P VT NT
Sbjct: 190 PQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNT 249
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESG 309
++ C G + EA +LA M K+G VP TY+ + ++ + + M G
Sbjct: 250 LLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFG 309
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG-CSPDEFAYNALVDALIDKGMLDMA 368
P + TY +L + G + F + +ME+LG SPD YN LVDA A
Sbjct: 310 FEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDA 369
Query: 369 RKYDEEMFAKGLSA 382
EEM KG+ +
Sbjct: 370 LNLLEEMREKGVKS 383
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 181/383 (47%), Gaps = 36/383 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY ++I+ L K + + +L+ M+ + S PN + + V++A+G ++
Sbjct: 162 TYGTLINGLSKNGQIKAALHLLQEMEKS-SVQPNLVMYSALIDGLCKDGFVSDALGLCSQ 220
Query: 93 LDEFG-LKDEVSYCNLVDALC-----------------------EYKHVIEAQELCFGEN 128
+ E G L D V+Y +L+D C +Y I LC E
Sbjct: 221 IGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALC-KEG 279
Query: 129 KNVGFSGLVEMNKTK-------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
+ + G++ M + YN ++ G+ + RE + M KRG+ D+ +Y+
Sbjct: 280 RILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYN 339
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+ +D CK+ +A+ L+KE+ K + + +YN++I + S + ++ EM
Sbjct: 340 VLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGS 399
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPREIL 299
P VVT N +I LC+ GR+ EA VL M KKG P+++TY+ CL +
Sbjct: 400 AQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVA 459
Query: 300 -GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+F+RM++SG+ P + Y +L+ + + + V++K+M PD +YN+L+D
Sbjct: 460 KDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDG 519
Query: 359 LIDKGMLDMARKYDEEMFAKGLS 381
L + G + ++ +EM G S
Sbjct: 520 LCNLGRIPHVQELLDEMCDSGQS 542
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 175/374 (46%), Gaps = 28/374 (7%)
Query: 33 TYNSVIDIL---GKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T+N +ID L G+ E ++ + + P + T+ + + Y + V+EA
Sbjct: 267 TFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIV----TYNALMEGYCSRENVHEAREL 322
Query: 90 FNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA----QELCFGENKNVGFSGLVEMNKTKI 144
FN++ + GL+ D ++Y L+D C+ K V EA +ELC NKN+ +
Sbjct: 323 FNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELC---NKNL-------VPTIAS 372
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G ++ +EM D+ +Y+I +D +CK G+ +A+ + M
Sbjct: 373 YNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMM 432
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
KKG+K ++V YN ++ + V+ A ++ M + G +P ++ N +I C+ V
Sbjct: 433 KKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVD 492
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFR--C-LEKPREILGLFDRMIESGIRPKMDTYVMLL 321
EA + EM K +PD+ +Y+ C L + + L D M +SG P + TY +LL
Sbjct: 493 EAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILL 552
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
F + +++++ E G PD + +A+VD L L MA + + G S
Sbjct: 553 DAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCS 611
Query: 382 AKPREELGTKLVQG 395
P + T L+
Sbjct: 612 --PNVQTYTILINA 623
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 126/280 (45%), Gaps = 41/280 (14%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+N I+ G+ K +F + + +G + D +Y ++ + K+G+ A+ L +EM+
Sbjct: 128 FNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEME 187
Query: 205 KKGIKMDVVAYNTVI----------RAVGV-----SEGVDFAMRVYREMREMGCQ----- 244
K ++ ++V Y+ +I A+G+ G+ Y + + C
Sbjct: 188 KSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQ 247
Query: 245 ---------------PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF 289
P T N +I LC+ GR+ EA VLA M K+G PD++TY+
Sbjct: 248 EVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALM 307
Query: 290 R---CLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
E E LF+RM++ G+ P + Y +L+ + + + V++K++
Sbjct: 308 EGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLV 367
Query: 347 PDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPRE 386
P +YN+L+D L + G + +K +EM SA+P +
Sbjct: 368 PTIASYNSLIDGLCNSGRISHVKKLLDEMHG---SAQPPD 404
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 136/302 (45%), Gaps = 10/302 (3%)
Query: 83 VNEAMGTFNKLDE-FGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
V++A+ FN++ F + L+ A+ H A L F + ++ G S +
Sbjct: 36 VDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISL-FTQLQSKGISPSI---- 90
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
+ +++ +F S + K G +L +++ ++ C +G +KA+ +
Sbjct: 91 -ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQ 149
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
+ +G D Y T+I + + + A+ + +EM + QP++V + +I LC++G
Sbjct: 150 NLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDG 209
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFR-CLEKPR--EILGLFDRMIESGIRPKMDTYV 318
V +A + +++ ++G + D +TY+ C R E+ L +M+ + P T+
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+L+ + G + V M + G PD YNAL++ + + AR+ M +
Sbjct: 270 ILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329
Query: 379 GL 380
GL
Sbjct: 330 GL 331
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 188/392 (47%), Gaps = 15/392 (3%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
+ ++ +FN + D F ++ +N+++ + F+ W + K + +
Sbjct: 107 SQSLDSSIYYFNEM-VDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK--IKVVLDV 163
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFG 126
+F I+ K A + ++ +L EFG V Y L+D C+ + +A++L F
Sbjct: 164 YSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFF- 222
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
+G GLV T Y +++ G FK + E +E+M + GV +L++Y+ M+
Sbjct: 223 ---EMGKFGLVANEWT--YTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQ 277
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+CK G+ A K++ EM+++G+ ++V YNT+I + + A +V +M+ P+
Sbjct: 278 LCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPN 337
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFD 303
++T NT+I C G++ +A ++ ++ +G P ++TY+ + + G +
Sbjct: 338 LITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVK 397
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
M E GI+P TY +L+ F R + + MEELG PD Y+ L+ KG
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKG 457
Query: 364 MLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
++ A + + M K L +P E + ++ G
Sbjct: 458 QMNEASRLFKSMVEKML--EPNEVIYNTMILG 487
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 132/301 (43%), Gaps = 10/301 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PN T+ + + +A F+++ E G+ + V+Y L+ LC EA ++
Sbjct: 266 PNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKV 325
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
V L+ YN ++ G+ + GK ++ RG+ L +Y++
Sbjct: 326 MDQMKSYVINPNLI------TYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVL 379
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ C+ G A K+ KEM+++GIK V Y +I S+ ++ A+++ M E+G
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGL 439
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF--RCLE-KPREILG 300
P V T + +I C G++ EA + M +K P+ + Y+ C E L
Sbjct: 440 VPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALR 499
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
LF M E + P + +Y L+R + L+ + +KM + G P + N + A
Sbjct: 500 LFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICNLISRAKT 559
Query: 361 D 361
D
Sbjct: 560 D 560
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 138/295 (46%), Gaps = 12/295 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN V++ L K ++ + M++ S N T+ + NEA ++
Sbjct: 270 TYNCVMNQLCKDGRTKDAFKVFDEMRERGVSC-NIVTYNTLIGGLCREMKANEANKVMDQ 328
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + + + ++Y L+D C + +A LC +++ GL T YN+++ G
Sbjct: 329 MKSYVINPNLITYNTLIDGFCSVGKLGKALSLC----RDLKSRGLSPSLVT--YNVLVSG 382
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + + +EM++RG+ +Y+I +D +S A++L M++ G+ D
Sbjct: 383 FCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPD 442
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V Y+ +I + ++ A R+++ M E +P+ V NT+I C+ G A +
Sbjct: 443 VHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFR 502
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRK 323
+M +K P+V +Y R L K R E L ++MI+SGI P DT L+ +
Sbjct: 503 DMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPS-DTICNLISR 556
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 161/328 (49%), Gaps = 22/328 (6%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P++ T+ + + + V E F+++ GLK DEV+Y L+D C+ ++ A L
Sbjct: 396 PDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSL 455
Query: 124 CFGENKNVGFSGLVEMNKTK---IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+ +V+M T Y ++ G K E +EM K+G+ ++ Y
Sbjct: 456 ---------HNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIY 506
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ ++ +CK+G +A+KL KEM+ GI D + Y TVI A +D A ++ +EM +
Sbjct: 507 NSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLD 566
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------HCFFRCLEK 294
G QP+VVT N ++ C G + + +L M +KG VPD ITY HC +
Sbjct: 567 RGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNT 626
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
+I + RM G+ P +TY +L++ + L+ + ++K+M E G P +YNA
Sbjct: 627 TTKI---YKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNA 683
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLSA 382
L+ K + AR+ EEM GL A
Sbjct: 684 LIKRFYKKKKILEARELFEEMRGHGLVA 711
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 168/400 (42%), Gaps = 40/400 (10%)
Query: 9 NDWKRALEFFNW--------VETDCHFTHTTDT---------------YNSVIDILGKFF 45
ND+ L FF+W +E C H NS ++I K
Sbjct: 114 NDYNLVLAFFDWARVRREPSLEARCIIIHIAVVSNDLRLAHELVHDYFLNSKLEIGVKMT 173
Query: 46 EFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYC 105
+F + LI+ K PN F I F+ V ++EA +KL +GL V C
Sbjct: 174 QF--THRLIYTYK---YWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSC 228
Query: 106 NLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFW 165
N L + E E+ G S T YN+I+ ++ +
Sbjct: 229 NAF--LSRIANNSEGIEMAIKVFCEYGISW-----NTTSYNIIIYSLCRLGKVKEAHRLL 281
Query: 166 EEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVS 225
+MD R D+ SYS +D C G+ KA+KL +M+ KG+K + YN++I +
Sbjct: 282 MQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLL-CK 340
Query: 226 EGVDF-AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
G F A +V REM P V T+I + G VR A EM K PD IT
Sbjct: 341 IGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYIT 400
Query: 285 YHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKME 341
Y + + +++ LF MI G++P TY L+ + + G + F + +M
Sbjct: 401 YTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMV 460
Query: 342 ELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
++G +P+ Y AL+D L G LD A + +EM KGL
Sbjct: 461 QMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQ 500
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 121/284 (42%), Gaps = 9/284 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A + A N + T TY ++ID L K E D + L+ M+ +
Sbjct: 444 CKAGEMVNAFSLHNEM-VQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQL- 501
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELC 124
N + M A + +A+ +++ G+ D ++Y ++DA C + +A +L
Sbjct: 502 NVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKL- 560
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
E + G V +N+++ G+ + M ++G+V D +Y+ M
Sbjct: 561 LQEMLDRGLQPTV-----VTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLM 615
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
C K+YK M+ +G+ D YN +I+ + + A +Y+EM E G
Sbjct: 616 KQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYV 675
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
P+V + N +IK + ++ EA + EM G V D Y+ F
Sbjct: 676 PTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFF 719
>gi|449442339|ref|XP_004138939.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Cucumis sativus]
Length = 559
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 192/408 (47%), Gaps = 25/408 (6%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILG----KFFEFDLSWNLIHRMKDN-PSSI 64
D K A FF W +++H YN +IDIL K +F + +L+ MK N +++
Sbjct: 129 DEKLAFRFFTWAARQENYSHEPRVYNEMIDILSSTRYKVKQFRIVCDLLDYMKRNDKNTV 188
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK--DEVSYCNLV-DALCEYKHVIEAQ 121
P F I+ + Y +L + F K + +K E++ NL+ DALC+ V +A+
Sbjct: 189 PVEVLFGIL-RNYTDKYLT--CLQKFAKKKKVIVKRQPEINAFNLLLDALCKCSLVEDAE 245
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
L + YN++ GW ++ G+ EEM + G D +Y+
Sbjct: 246 AL-------LKKVKKKLKPDANTYNIMFFGWCRVRNPGRGMRVLEEMIELGFDPDNFTYN 298
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMD---VVAYNTVIRAVGVSEGVDFAMRVYREM 238
+ CK+G +A +L++ M+ KG + Y +I A+ + ++ + M
Sbjct: 299 TAIASFCKAGMLKEACELFEFMRTKGSALSSPTAKTYAIMIVALVNNGRMEECFKFLEYM 358
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKP 295
+ GC P V T +I+ +C G+V+EAY L EM KKG PD++TY+CF + L +
Sbjct: 359 IKSGCLPDVSTYKEMIEGICVAGKVQEAYMFLEEMGKKGYPPDIVTYNCFLKVLCDNKMS 418
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
+ L DRMIE G P + TY ML+ F F +W +M+ GC+ D +Y +
Sbjct: 419 DDALRHCDRMIEVGCLPSVQTYNMLISMFFEMNDHNGAFQIWLEMDRYGCTRDVDSYCIM 478
Query: 356 VDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQSG 403
++ L + A EE+ KG+ P + + L+Q ++G G
Sbjct: 479 IEGLFGCNKVGDACLLLEEVVNKGMKL-PFRKFDSFLMQLSVNGNLKG 525
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 107/244 (43%), Gaps = 22/244 (9%)
Query: 6 CYANDWKRALEFFNWVET--DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
C A K A E F ++ T + T TY +I L + + + M +
Sbjct: 305 CKAGMLKEACELFEFMRTKGSALSSPTAKTYAIMIVALVNNGRMEECFKFLEYMIKS-GC 363
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK----DEVSYCNLVDALCEYKHVIE 119
+P+ +T++ M + A V EA + L+E G K D V+Y + LC+ K +
Sbjct: 364 LPDVSTYKEMIEGICVAGKVQEA---YMFLEEMGKKGYPPDIVTYNCFLKVLCDNKMSDD 420
Query: 120 AQELCFGENKNVGFSGLVE---MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
A C ++E + + YNM++ +F+M+ + W EMD+ G +D
Sbjct: 421 ALRHC---------DRMIEVGCLPSVQTYNMLISMFFEMNDHNGAFQIWLEMDRYGCTRD 471
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
+ SY I ++ + K A L +E+ KG+K+ +++ + + V+ + R+
Sbjct: 472 VDSYCIMIEGLFGCNKVGDACLLLEEVVNKGMKLPFRKFDSFLMQLSVNGNLKGIHRLSE 531
Query: 237 EMRE 240
MR+
Sbjct: 532 HMRK 535
>gi|15228825|ref|NP_188906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274241|sp|Q9LUJ4.1|PP248_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22670, mitochondrial; Flags: Precursor
gi|9279685|dbj|BAB01242.1| unnamed protein product [Arabidopsis thaliana]
gi|332643142|gb|AEE76663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 562
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 196/403 (48%), Gaps = 22/403 (5%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM-KDN 60
+ L ++N W +A FF W + + H+ TYN+++D+LGK FDL W L++ M K+
Sbjct: 137 QVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNE 196
Query: 61 PSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDE-FGLK-DEVSYCNLVDALCEYKHVI 118
S + T + +R + N+A+ F ++++ +G+K D ++ +L+DAL + +
Sbjct: 197 ESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIE 256
Query: 119 EAQELCFGENKNVGFSGLVEMNK--TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
A E+ F L + K + +N+++ G+ K + R + M D
Sbjct: 257 HAHEV---------FLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPD 307
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
+ +Y+ +++ CK G + ++ +EM++ G +VV Y V+ ++G S+ V A+ VY
Sbjct: 308 VVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYE 367
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR-CLEKP 295
+M+E GC P +++I +L + GR ++A + +M +G DV+ Y+ L
Sbjct: 368 KMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHS 427
Query: 296 RE--ILGLFDRMIE---SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF 350
R+ L L RM + P ++TY LL+ ++ + ++ M + S D
Sbjct: 428 RDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVS 487
Query: 351 AYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLV 393
Y L+ L G ++ A + EE KG+ PR+ LV
Sbjct: 488 TYILLIRGLCMSGKVEEACLFFEEAVRKGMV--PRDSTCKMLV 528
>gi|413949009|gb|AFW81658.1| hypothetical protein ZEAMMB73_233967 [Zea mays]
Length = 637
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 172/372 (46%), Gaps = 16/372 (4%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKR 76
FF W FTHTT TY ++ ILGK +F+ L+ M + + F++ K
Sbjct: 212 FFRWATASGGFTHTTITYCKMLLILGKTRQFESMVALLQEMGK--AGTLSMDAFKVAIKS 269
Query: 77 YVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSG 135
+ A + A+G F + + G D V S+ L+ AL EA+++ +K +G
Sbjct: 270 FAAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALANEGLGREARQVF---DKMLGQYS 326
Query: 136 LVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK 195
+ Y ++ W + W EM ++G+ D+ ++ ++ + + + +
Sbjct: 327 ----PDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRQHE 382
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
AVK+++ MK KG +V Y +I +D AM + EM+E CQP V T ++
Sbjct: 383 AVKMFELMKAKGPPPNVWTYTMLICNHCKRGKMDMAMECFEEMQEARCQPDVATYTCLLV 442
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRP 312
R+ AVL EM +KGC PD TY+ + L P + ++ +MI+ G+ P
Sbjct: 443 GYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLDP 502
Query: 313 KMDTYVMLLRKF--GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
+ TY M+++ + G + VW++M G PD +Y + I G + A K
Sbjct: 503 TIHTYNMMMKSYFLGDRNYAMGC-AVWEEMHRRGICPDVNSYTVFISGHIRHGRPEEAYK 561
Query: 371 YDEEMFAKGLSA 382
Y EEM KG+ A
Sbjct: 562 YIEEMINKGMKA 573
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 10/155 (6%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ AT+ + Y A ++ ++ + G D +Y L+ L K +A +
Sbjct: 432 PDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRKMPDDAARI 491
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWF--KMSWWGKCREFWEEMDKRGVVKDLHSYS 181
K + GL T YNM+++ +F ++ C WEEM +RG+ D++SY+
Sbjct: 492 ----YKKMIKKGLDPTIHT--YNMMMKSYFLGDRNYAMGC-AVWEEMHRRGICPDVNSYT 544
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
+++ + G+P +A K +EM KG+K + N
Sbjct: 545 VFISGHIRHGRPEEAYKYIEEMINKGMKAPQIDCN 579
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 181/383 (47%), Gaps = 36/383 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY ++I+ L K + + +L+ M+ + S PN + + V++A+G ++
Sbjct: 162 TYGTLINGLSKNGQIKAALHLLQEMEKS-SVQPNLVMYSALIDGLCKDGFVSDALGLCSQ 220
Query: 93 LDEFG-LKDEVSYCNLVDALC-----------------------EYKHVIEAQELCFGEN 128
+ E G L D V+Y +L+D C +Y I LC E
Sbjct: 221 IGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALC-KEG 279
Query: 129 KNVGFSGLVEMNKTK-------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
+ + G++ M + YN ++ G+ + RE + M KRG+ D+ +Y+
Sbjct: 280 RILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYN 339
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+ +D CK+ +A+ L+KE+ K + + +YN++I + S + ++ EM
Sbjct: 340 VLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGS 399
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPREIL 299
P VVT N +I LC+ GR+ EA VL M KKG P+++TY+ CL +
Sbjct: 400 AQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVA 459
Query: 300 -GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+F+RM++SG+ P + Y +L+ + + + V++K+M PD +YN+L+D
Sbjct: 460 KDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDG 519
Query: 359 LIDKGMLDMARKYDEEMFAKGLS 381
L + G + ++ +EM G S
Sbjct: 520 LCNLGRIPHVQELLDEMCDSGQS 542
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 175/374 (46%), Gaps = 28/374 (7%)
Query: 33 TYNSVIDIL---GKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T+N +ID L G+ E ++ + + P + T+ + + Y + V+EA
Sbjct: 267 TFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIV----TYNALMEGYCSRENVHEAREL 322
Query: 90 FNKLDEFGLKDEV-SYCNLVDALCEYKHVIEA----QELCFGENKNVGFSGLVEMNKTKI 144
FN++ + GL+ +V +Y L+D C+ K V EA +ELC NKN+ +
Sbjct: 323 FNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELC---NKNL-------VPTIAS 372
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G ++ +EM D+ +Y+I +D +CK G+ +A+ + M
Sbjct: 373 YNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMM 432
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
KKG+K ++V YN ++ + V+ A ++ M + G +P ++ N +I C+ V
Sbjct: 433 KKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVD 492
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFR--C-LEKPREILGLFDRMIESGIRPKMDTYVMLL 321
EA + EM K +PD+ +Y+ C L + + L D M +SG P + TY +LL
Sbjct: 493 EAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILL 552
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
F + +++++ E G PD + +A+VD L L MA + + G S
Sbjct: 553 DAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCS 611
Query: 382 AKPREELGTKLVQG 395
P + T L+
Sbjct: 612 --PNVQTYTILINA 623
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 125/280 (44%), Gaps = 41/280 (14%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+N I+ G+ K +F + + +G + D +Y ++ + K+G+ A+ L +EM+
Sbjct: 128 FNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEME 187
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG---------------------- 242
K ++ ++V Y+ +I + V A+ + ++ E G
Sbjct: 188 KSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQ 247
Query: 243 -------------CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF 289
P T N +I LC+ GR+ EA VLA M K+G PD++TY+
Sbjct: 248 EVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALM 307
Query: 290 R---CLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
E E LF+RM++ G+ P + Y +L+ + + + V++K++
Sbjct: 308 EGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLV 367
Query: 347 PDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPRE 386
P +YN+L+D L + G + +K +EM SA+P +
Sbjct: 368 PTIASYNSLIDGLCNSGRISHVKKLLDEMHG---SAQPPD 404
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 136/302 (45%), Gaps = 10/302 (3%)
Query: 83 VNEAMGTFNKLDE-FGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
V++A+ FN++ F + L+ A+ H A L F + ++ G S +
Sbjct: 36 VDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISL-FTQLQSKGISPSI---- 90
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
+ +++ +F S + K G +L +++ ++ C +G +KA+ +
Sbjct: 91 -ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQ 149
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
+ +G D Y T+I + + + A+ + +EM + QP++V + +I LC++G
Sbjct: 150 NLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDG 209
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFR-CLEKPR--EILGLFDRMIESGIRPKMDTYV 318
V +A + +++ ++G + D +TY+ C R E+ L +M+ + P T+
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+L+ + G + V M + G PD YNAL++ + + AR+ M +
Sbjct: 270 ILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329
Query: 379 GL 380
GL
Sbjct: 330 GL 331
>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Glycine max]
Length = 545
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 174/352 (49%), Gaps = 20/352 (5%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN++ID L K + NL M S N T+ + + + EA+G N++
Sbjct: 206 YNTIIDCLCKRKLVSEACNLFSEMSVKGIS-ANVVTYSAIIHGFCIVGKLTEALGFLNEM 264
Query: 94 DEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ +V Y LVDAL + V EA+ + K ++ YN ++ G+
Sbjct: 265 VLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVIT------YNTLIDGY 318
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K + + GV D+ SY+I ++ +CK + +A+ LYKEM +K + +
Sbjct: 319 AK--------HVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNT 370
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V YN++I + S + +A + EM + G +V+T N++I LC+NG++ +A A++ +
Sbjct: 371 VTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINK 430
Query: 273 MPKKGCVPDVITYHCFFRCL----EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M +G PD+ T + L ++ + GLF +++ G P + TY +++ + G
Sbjct: 431 MKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEG 490
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
L + + KME+ GCSP+ + ++ AL++KG D A K EM A+GL
Sbjct: 491 LLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGL 542
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 37/311 (11%)
Query: 102 VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKC 161
V Y ++D LC+ K V EA L F E G S V Y+ I+ G+ + +
Sbjct: 204 VMYNTIIDCLCKRKLVSEACNL-FSEMSVKGISANVVT-----YSAIIHGFCIVGKLTEA 257
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI-- 219
F EM + + D++ Y+ +D + K GK +A + + K +K +V+ YNT+I
Sbjct: 258 LGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDG 317
Query: 220 ------RAVGVS-------------------EGVDFAMRVYREMREMGCQPSVVTCNTVI 254
AVG+ + V+ A+ +Y+EM + P+ VT N++I
Sbjct: 318 YAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLI 377
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIR 311
LC++GR+ A+ ++ EM +G +VITY+ L K ++ + L ++M + GI+
Sbjct: 378 DGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQ 437
Query: 312 PKMDTYVMLLRKFGRWG-FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
P M T +LL G L+ +++ + + G P+ + YN ++ +G+LD A
Sbjct: 438 PDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYA 497
Query: 371 YDEEMFAKGLS 381
+M G S
Sbjct: 498 LQSKMEDSGCS 508
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 153/353 (43%), Gaps = 19/353 (5%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
+N ++D K + +L R++ P+ T I+ + +N A +K+
Sbjct: 66 FNKILDSFAKMKHYPTVVSLSRRLELKAIQ-PDFFTLNILINCFCHLGQINLAFSVLSKI 124
Query: 94 DEFGLK-DEVSYCNLVDALC---EYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
++G + D V+ L+ LC + K + + + GF +++ Y ++
Sbjct: 125 LKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQ----GF----RLDQVS-YGTLI 175
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G K+ + +D R ++ Y+ +D +CK +A L+ EM KGI
Sbjct: 176 NGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGIS 235
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
+VV Y+ +I + + A+ EM P V NT++ L + G+V+EA V
Sbjct: 236 ANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNV 295
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
LA + K P+VITY+ K +F+ + G+ P + +Y +++ + +
Sbjct: 296 LAVIVKTCLKPNVITYNTLIDGYAK-----HVFNAVGLMGVTPDVWSYNIMINRLCKIKR 350
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ ++K+M + P+ YN+L+D L G + A +EM +G A
Sbjct: 351 VEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHA 403
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 81/174 (46%), Gaps = 3/174 (1%)
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
++ +N ++ + + + + R + QP T N +I C G++ A++VL+
Sbjct: 63 IIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLS 122
Query: 272 EMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
++ K G PD +T + CL+ + ++ L D+++ G R +Y L+ + G
Sbjct: 123 KILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIG 182
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
R + ++++ P+ YN ++D L + ++ A EM KG+SA
Sbjct: 183 ETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISA 236
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 9/180 (5%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T TYNS+ID L K +W+LI M D N T+ + +++A+
Sbjct: 370 TVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHH-ANVITYNSLINGLCKNGQLDKAIALI 428
Query: 91 NKLDEFGLKDEVSYCNLV--DALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
NK+ + G++ ++ N++ LC+ K + AQ L F + + G+ V YN+I
Sbjct: 429 NKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGL-FQDLLDKGYHPNVYT-----YNII 482
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G K + +M+ G + ++ I + + + G+ KA KL EM +G+
Sbjct: 483 IYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGL 542
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 162/359 (45%), Gaps = 47/359 (13%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQE 122
+P+ F M + + +++A+ FN + E GL D V Y L+ C + EA
Sbjct: 362 VPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMN 421
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L +N M+ YN IL G K G+ + + EM +RG+ D ++ +I
Sbjct: 422 L-----RNEMLQQGCAMDVVT-YNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTI 475
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF------------ 230
+D CK G A++L+K+MK+K IK+DVV YNT++ G +D
Sbjct: 476 LIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 535
Query: 231 -----------------------AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
A RV+ EM +P+V+ CN++IK C +G +
Sbjct: 536 ILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGE 595
Query: 268 AVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIE--SGIRPKMDTYVMLLR 322
L +M +G VPD I+Y+ F E + GL +M E G+ P + TY +L
Sbjct: 596 IFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILH 655
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
F R ++ V +KM E G +PD Y +L++ + + L A ++ +EM +G S
Sbjct: 656 GFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFS 714
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 161/357 (45%), Gaps = 27/357 (7%)
Query: 26 HFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNE 85
+F HT+ + +++I IL + + + + RM I R+ +VN
Sbjct: 98 NFKHTSLSLSAMIHILVRSGRLSDAQSCVLRM------IRRSGVSRV--------EIVNS 143
Query: 86 AMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
+ T++ G D V + L+ + + + EA E F ++ G++ ++ I
Sbjct: 144 LVSTYSNC---GSNDSV-FDLLIRTFVQARKLREAYE-AFTLLRSKGYTVSIDACNALIG 198
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
+++ GW +++W ++E+ + GV ++++ +I ++ +CK GK K E+++
Sbjct: 199 SLVRIGWVELAW-----RIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQE 253
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
KG+ D+V YNT+I A ++ A + M G P V T NTVI LC++G+
Sbjct: 254 KGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYER 313
Query: 266 AYAVLAEMPKKGCVPDVITYHCFF--RCLE-KPREILGLFDRMIESGIRPKMDTYVMLLR 322
A V AEM + G PD TY C + E +F M + P + + ++
Sbjct: 314 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMS 373
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
F R G L + + ++E G PD Y L+ KGM+ A EM +G
Sbjct: 374 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQG 430
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 177/383 (46%), Gaps = 16/383 (4%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A + A E F + + +T + D N++I L + +L+W + + + + N
Sbjct: 168 ARKLREAYEAFTLLRSK-GYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGV-NV 225
Query: 68 ATFRIMFKRYVTAHLVNEAMGTF-NKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCF 125
T IM + E +GTF +++ E G+ D V+Y L+ A + EA EL
Sbjct: 226 YTLNIMVNALCKDGKM-EKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMH 284
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
GFS V YN ++ G K + + +E + EM + G+ D +Y +
Sbjct: 285 AMPSK-GFSPGV-----YTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLM 338
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
CK G + ++ +M+ + + D+V +++++ S +D A+ + ++E G P
Sbjct: 339 EACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIP 398
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG----L 301
V +I+ C G + EA + EM ++GC DV+TY+ L K R++LG L
Sbjct: 399 DNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCK-RKMLGEADKL 457
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
F+ M E G+ P T +L+ + G L+ ++KKM+E D YN L+D
Sbjct: 458 FNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGK 517
Query: 362 KGMLDMARKYDEEMFAKGLSAKP 384
G +D A++ +M +K + P
Sbjct: 518 VGDIDTAKEIWADMVSKEILPTP 540
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 16/190 (8%)
Query: 98 LKDEVSYCNLVDALCEYKHVIEA----QELCFGENKNVGFSGLVEMNKTKIYNMILRGWF 153
L +S+ LV+ALC H+ EA E+ K I N +++G+
Sbjct: 537 LPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPT----------VMICNSMIKGYC 586
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK--GIKMD 211
+ F E+M G V D SY+ + K KA L K+M++K G+ D
Sbjct: 587 RSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPD 646
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V YN+++ + A V R+M E G P T ++I + EA+
Sbjct: 647 VFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHD 706
Query: 272 EMPKKGCVPD 281
EM ++G PD
Sbjct: 707 EMLQRGFSPD 716
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 184/383 (48%), Gaps = 37/383 (9%)
Query: 33 TYNSVID-ILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
+YN+V+D + + N+ M ++ S PN T+ I+ + + A ++ A+ F+
Sbjct: 171 SYNAVLDATIRSKRNISFAENVFKEMLESQVS-PNVFTYNILIRGFCFAGNIDVALTLFD 229
Query: 92 KLDEFG-LKDEVSYCNLVDALCEYKHV--------------IEAQELCF----------G 126
K++ G L + V+Y L+D C+ + + +E + + G
Sbjct: 230 KMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREG 289
Query: 127 ENKNVGFSGLVEMNKTK------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
K V F L EMN+ YN +++G+ K + + EM + G+ + +Y
Sbjct: 290 RMKEVSFV-LTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 348
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ + MCK+G +A++ +M+ +G+ + Y T++ ++ A RV REM +
Sbjct: 349 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 408
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI-- 298
G PSVVT N +I C G++ +A AVL +M +KG PDV++Y + ++
Sbjct: 409 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDE 468
Query: 299 -LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
L + M+E GI+P TY L++ F + ++++M +G PDEF Y AL++
Sbjct: 469 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALIN 528
Query: 358 ALIDKGMLDMARKYDEEMFAKGL 380
A +G L+ A + EM KG+
Sbjct: 529 AYCMEGDLEKALQLHNEMVEKGV 551
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 159/363 (43%), Gaps = 22/363 (6%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C+A + AL F+ +ET + TYN++ID K + D + L+ M P
Sbjct: 216 CFAGNIDVALTLFDKMETKGCLPNVV-TYNTLIDGYCKLRKIDDGFKLLRSMALKGLE-P 273
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKH-----VIE 119
N ++ ++ + E +++ G DEV+Y L+ C+ + V+
Sbjct: 274 NLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMH 333
Query: 120 AQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
A+ L G +V Y ++ K + EF ++M RG+ + +
Sbjct: 334 AEMLRHGLTPSV-----------ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y+ +D + G +A ++ +EM G VV YN +I V+ ++ A+ V +M+
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPR 296
E G P VV+ +TV+ C + V EA V EM +KG PD ITY + + +
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
E L++ M+ G+ P TY L+ + G L + +M E G PD Y+ L+
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 357 DAL 359
+ L
Sbjct: 563 NGL 565
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 169/398 (42%), Gaps = 35/398 (8%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIH-----RMKDNPSS 63
ND L+F NW FT + IL KF + + L + D +S
Sbjct: 60 NDQALILKFLNWANPHQFFTLRCKCI--TLHILTKFKLYKTAQILAEDVAAKTLDDEYAS 117
Query: 64 I-------------PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVD 109
+ + F ++ K Y L+++A+ + G V SY ++D
Sbjct: 118 LVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLD 177
Query: 110 ALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMD 169
A K I E F E S V YN+++RG+ +++M+
Sbjct: 178 ATIRSKRNISFAENVFKEMLESQVSPNV-----FTYNILIRGFCFAGNIDVALTLFDKME 232
Query: 170 KRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV---GVSE 226
+G + ++ +Y+ +D CK K KL + M KG++ ++++YN VI + G +
Sbjct: 233 TKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMK 292
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
V F V EM G VT NT+IK C+ G +A + AEM + G P VITY
Sbjct: 293 EVSF---VLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYT 349
Query: 287 CFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
+ K + + D+M G+ P TY L+ F + G++ + V ++M +
Sbjct: 350 SLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN 409
Query: 344 GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G SP YNAL++ G ++ A E+M KGLS
Sbjct: 410 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 149/326 (45%), Gaps = 33/326 (10%)
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGF 133
FK Y TA ++ E + DE Y +LV +K + E +LC+
Sbjct: 93 FKLYKTAQILAEDVAAKTLDDE--------YASLV-----FKSLQETYDLCY-------- 131
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
+ + +++++++ + ++S K G + + SY+ +D +S +
Sbjct: 132 ------STSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRN 185
Query: 194 WK-AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
A ++KEM + + +V YN +IR + +D A+ ++ +M GC P+VVT NT
Sbjct: 186 ISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNT 245
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESG 309
+I C+ ++ + + +L M KG P++I+Y+ C E + +E+ + M G
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
TY L++ + + G V+ +M G +P Y +L+ ++ G ++ A
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 370 KYDEEMFAKGLSAKPREELGTKLVQG 395
++ ++M +GL P E T LV G
Sbjct: 366 EFLDQMRVRGLC--PNERTYTTLVDG 389
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 81/397 (20%), Positives = 154/397 (38%), Gaps = 62/397 (15%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A + RA+EF + + TY +++D + + ++ ++ M DN S P
Sbjct: 356 CKAGNMNRAMEFLDQMRVR-GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFS-P 413
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ + + + +A+ + E GL D VSY ++ C V EA +
Sbjct: 414 SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRV- 472
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+ + G+ T Y+ +++G+ + + + +EEM + G+ D +Y+ +
Sbjct: 473 ---KREMVEKGIKP--DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV--------------------GV 224
+ C G KA++L+ EM +KG+ DVV Y+ +I + V
Sbjct: 528 NAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV 587
Query: 225 SEGVDF------------------------------AMRVYREMREMGCQPSVVTCNTVI 254
V + A +V+ M +P N +I
Sbjct: 588 PSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMI 647
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIR 311
C G +R+AY + EM K G + +T + L K E+ + ++ S
Sbjct: 648 HGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCEL 707
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
+ + +L+ R G + V V +M + G P+
Sbjct: 708 SEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 184/400 (46%), Gaps = 16/400 (4%)
Query: 5 SCYANDWKRALEFFNWVETDCHFTH----TTDTYNSVIDILGKFFEFDLSWNLIHRMKDN 60
+C + AL FN V + T T TYN ++D + DL L +
Sbjct: 127 ACITDGPALALALFNRVCREEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRT 186
Query: 61 PSSIPNHATFRIMFKRYVTAHLVNEAMGTF-NKLDEFG-LKDEVSYCNLVDALCEYKHVI 118
+ + T + K A+ EA+ +++ E G + + VSY ++ ALC+
Sbjct: 187 GLKM-DQITANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQ 245
Query: 119 EAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
A +L K G Y+ ++ G+F GK + EM ++GV D+
Sbjct: 246 RALDLLQMMAKQGGACS----PDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVV 301
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+Y++ +D +CK+ KA + ++M G + D V Y+ +I + A +++REM
Sbjct: 302 TYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREM 361
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP--- 295
++ G P++VTCN+ + LC++GR +EA M KG PD+ +Y
Sbjct: 362 KKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCF 421
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
+++GLF+ M +GI + +L+ + + G + +++ +M++ G SPD Y+ +
Sbjct: 422 ADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTV 481
Query: 356 VDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+ G L A + +M A+G+ +P + + ++QG
Sbjct: 482 ISTFSRMGRLTDAMEKFNQMVARGI--QPNTAVYSSIIQG 519
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 166/386 (43%), Gaps = 29/386 (7%)
Query: 17 FFNWVETD--CHFTHTTD---------TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
FFN ET C H TYN +ID L K D L+ R + P
Sbjct: 275 FFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMD-KAELVLRQMTTDGAQP 333
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELC 124
+ T+ M Y T + EA F ++ + GL + CN + +LC++ EA E
Sbjct: 334 DTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEF- 392
Query: 125 FGENKNVGFSGLVEMNKTKIYN--MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
F G +K I++ +L G+ + + M G+ + H ++I
Sbjct: 393 FDSMTAKG-------HKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTI 445
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ K G A+ ++ EM+++G+ DVV Y+TVI + AM + +M G
Sbjct: 446 LIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARG 505
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV-PDVITYHCFFRCLEKPREIL-- 299
QP+ +++I+ C +G + +A +++EM KG PD++ + L K ++
Sbjct: 506 IQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDA 565
Query: 300 -GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+FD + G RP + T+ L+ + G + F + ME +G PD YN L+D
Sbjct: 566 HDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDG 625
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAKP 384
G ++ EM KG+ KP
Sbjct: 626 YFKNGRINDGLTLFREMQRKGV--KP 649
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 164/382 (42%), Gaps = 17/382 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFE--FDLSWNLIHRMKDNPSS 63
C K A EFF+ + H D ++ + G E F L + MK N +
Sbjct: 381 CKHGRSKEAAEFFDSMTAK---GHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIA 437
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
H F I+ Y +V++AM F ++ + G+ D V+Y ++ + +A E
Sbjct: 438 ANCH-VFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAME 496
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVK-DLHSYS 181
F + G T +Y+ I++G+ K +E EM +G+ + D+ +S
Sbjct: 497 K-FNQMVARGIQ-----PNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFS 550
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
++ +CK G+ A ++ G + V+ +N++I + +D A ++ M +
Sbjct: 551 SVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVV 610
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGL 301
G +P +VT NT++ +NGR+ + + EM +KG P+ +TY L + +
Sbjct: 611 GVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAA 670
Query: 302 ---FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
F MIESG + Y ++L R ++++K+ + N +++A
Sbjct: 671 RKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINA 730
Query: 359 LIDKGMLDMARKYDEEMFAKGL 380
+ + A++ + A GL
Sbjct: 731 MYKVQRKEEAKELFATISASGL 752
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 122/273 (44%), Gaps = 22/273 (8%)
Query: 34 YNSVIDIL---GKFFE----FDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
++SVI+ L G+ + FDL+ ++ R P TF + Y +++A
Sbjct: 549 FSSVINSLCKDGRVMDAHDIFDLATDIGER--------PGVITFNSLIDGYCLVGKMDKA 600
Query: 87 MGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
+ ++ G++ D V+Y L+D + + + L F E + G V+ N T Y
Sbjct: 601 FKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTL-FREMQRKG----VKPN-TVTY 654
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
++L G F+ R+ + EM + G + Y I + +C++ +A+ L++++
Sbjct: 655 GIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGT 714
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+K + NT+I A+ + + A ++ + G P+ T +I L ++G V +
Sbjct: 715 MNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVED 774
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI 298
A + + M K G VP + R L + EI
Sbjct: 775 ANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEI 807
>gi|449505615|ref|XP_004162522.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g73400, mitochondrial-like [Cucumis sativus]
Length = 559
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 192/408 (47%), Gaps = 25/408 (6%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILG----KFFEFDLSWNLIHRMKDN-PSSI 64
D K A FF W +++H YN +IDIL K +F + +L+ MK N +++
Sbjct: 129 DEKLAFRFFTWAARQENYSHEPRVYNEMIDILSSTRYKVKQFRIVCDLLDYMKRNDKNTV 188
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK--DEVSYCNLV-DALCEYKHVIEAQ 121
P F I+ + Y +L + F K + +K E++ NL+ DALC+ V +A+
Sbjct: 189 PVEVLFGIL-RNYTDKYLT--CLQKFAKKKKVIVKRQPEINAFNLLLDALCKCSLVEDAE 245
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
L + YN++ GW ++ G+ EEM + G D +Y+
Sbjct: 246 AL-------LKKVKKKLKPDANTYNIMXFGWCRVRNPGRGMRVLEEMIELGFDPDNFTYN 298
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMD---VVAYNTVIRAVGVSEGVDFAMRVYREM 238
+ CK+G +A +L++ M+ KG + Y +I A+ + ++ + M
Sbjct: 299 TAIASFCKAGMLKEACELFEFMRTKGSALSSPTAKTYAIMIVALVNNGRMEECFKFLEYM 358
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKP 295
+ GC P V T +I+ +C G+V+EAY L EM KKG PD++TY+CF + L +
Sbjct: 359 IKSGCLPDVSTYKEMIEGICVAGKVQEAYMFLEEMGKKGYPPDIVTYNCFLKVLCDNKMS 418
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
+ L DRMIE G P + TY ML+ F F +W +M+ GC+ D +Y +
Sbjct: 419 DDALRHCDRMIEVGCLPSVQTYNMLISMFFEMNDHNGAFQIWLEMDRYGCTRDVDSYCIM 478
Query: 356 VDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQSG 403
++ L + A EE+ KG+ P + + L+Q ++G G
Sbjct: 479 IEGLFGCNKVGDACLLLEEVVNKGMKL-PFRKFDSFLMQLSVNGNLKG 525
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 107/244 (43%), Gaps = 22/244 (9%)
Query: 6 CYANDWKRALEFFNWVET--DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
C A K A E F ++ T + T TY +I L + + + M +
Sbjct: 305 CKAGMLKEACELFEFMRTKGSALSSPTAKTYAIMIVALVNNGRMEECFKFLEYMIKS-GC 363
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK----DEVSYCNLVDALCEYKHVIE 119
+P+ +T++ M + A V EA + L+E G K D V+Y + LC+ K +
Sbjct: 364 LPDVSTYKEMIEGICVAGKVQEA---YMFLEEMGKKGYPPDIVTYNCFLKVLCDNKMSDD 420
Query: 120 AQELCFGENKNVGFSGLVE---MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
A C ++E + + YNM++ +F+M+ + W EMD+ G +D
Sbjct: 421 ALRHC---------DRMIEVGCLPSVQTYNMLISMFFEMNDHNGAFQIWLEMDRYGCTRD 471
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
+ SY I ++ + K A L +E+ KG+K+ +++ + + V+ + R+
Sbjct: 472 VDSYCIMIEGLFGCNKVGDACLLLEEVVNKGMKLPFRKFDSFLMQLSVNGNLKGIHRLSE 531
Query: 237 EMRE 240
MR+
Sbjct: 532 HMRK 535
>gi|297733848|emb|CBI15095.3| unnamed protein product [Vitis vinifera]
Length = 815
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 156/317 (49%), Gaps = 26/317 (8%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
N +AL+FF ++ + H + +++ IDI G+ ++ W L+ RM+ PN
Sbjct: 79 NHGPKALQFFKSLDYHPTYAHVSSSFDHAIDIAGRLRDYKTLWTLVDRMRTRRLG-PNPK 137
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGE 127
TF I+ +RYV+A + A+ F + E G ++D S+ ++D LC+ K V
Sbjct: 138 TFAIITERYVSAGKPDRAIKIFFSMHEHGCVQDLNSFNTILDVLCKSKRV---------- 187
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
EM K++ + RG+F+ + EF+ +M KR D+ +Y+ +
Sbjct: 188 ----------EMADNKLFK-VFRGFFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGF 236
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
+G+ KA +++ EM +G+ V YN I+ + + V+ A+ V+ EM G P+
Sbjct: 237 GVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNS 296
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDR 304
T N VI+ LC GR+ +A +A M C P+V Y+ R EI L +F++
Sbjct: 297 TTYNVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQIYNVVIRYFCDAEEIEKGLNVFEK 356
Query: 305 MIESGIRPKMDTYVMLL 321
M ++ P +DTY +L+
Sbjct: 357 MGDADCLPNLDTYNILI 373
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 118/248 (47%), Gaps = 32/248 (12%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKS--------------------GKPWKAVKLYKEMKKKG 207
M + G V+DL+S++ +D++CKS G+ +A + + +MKK+
Sbjct: 162 MHEHGCVQDLNSFNTILDVLCKSKRVEMADNKLFKVFRGFFRAGQLKEAWEFFLQMKKRK 221
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
++DVV Y TV+ GV+ V A RV+ EM G PSV T N I++LC+ V A
Sbjct: 222 CEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVLCKKDNVENAI 281
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCL------EKPREILGLFDRMIESGIRPKMDTYVMLL 321
+V EM +KG +P+ TY+ R L EK E + RM + P + Y +++
Sbjct: 282 SVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMA---RMKDDECEPNVQIYNVVI 338
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD---MARKYDEEMFAK 378
R F + V++KM + C P+ YN L+ A+ + D A K EM +
Sbjct: 339 RYFCDAEEIEKGLNVFEKMGDADCLPNLDTYNILISAMFVRKKSDYLLTAGKLLIEMVER 398
Query: 379 GLSAKPRE 386
G + E
Sbjct: 399 GFCKRNSE 406
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 29/232 (12%)
Query: 159 GKCREF---WEEMDK---RGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
G+ R++ W +D+ R + + +++I + +GKP +A+K++ M + G D+
Sbjct: 112 GRLRDYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAIKIFFSMHEHGCVQDL 171
Query: 213 VAYNTVIRAVGVSEGVDFA----MRVYR----------------EMREMGCQPSVVTCNT 252
++NT++ + S+ V+ A +V+R +M++ C+ VVT T
Sbjct: 172 NSFNTILDVLCKSKRVEMADNKLFKVFRGFFRAGQLKEAWEFFLQMKKRKCEIDVVTYTT 231
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESG 309
V+ G VR+A V EM +G +P V TY+ F + L K + + +F+ M+ G
Sbjct: 232 VVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVLCKKDNVENAISVFEEMLRKG 291
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
P TY +++R G + +M++ C P+ YN ++ D
Sbjct: 292 YMPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQIYNVVIRYFCD 343
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 229 DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
D A++++ M E GC + + NT++ +LC++ RV A L ++ + F
Sbjct: 153 DRAIKIFFSMHEHGCVQDLNSFNTILDVLCKSKRVEMADNKLFKV-----------FRGF 201
Query: 289 FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
FR + +E F +M + + TY ++ FG G +R V+ +M G P
Sbjct: 202 FRA-GQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPS 260
Query: 349 EFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
YNA + L K ++ A EEM KG
Sbjct: 261 VATYNAFIQVLCKKDNVENAISVFEEMLRKG 291
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 171/381 (44%), Gaps = 60/381 (15%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGK----FFEFDLSWNLIHRMKDNPSSIPNHAT 69
A++FF+W + H +YN ++DIL K F + +L+H PN T
Sbjct: 10 AIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHS-----GCSPNLVT 64
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENK 129
F+I+ + A A+ LDEF + +V
Sbjct: 65 FKILIRGNCKAGQATRALEFLRALDEFSVAPDV--------------------------- 97
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
I+N ++ G FK + + +E M+ V D+ +Y+ + +CK
Sbjct: 98 -------------YIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCK 144
Query: 190 SGKPWKAVKLYKEMKKKGIKM--DVVAYNTVIRAVGVSEG-VDFAMRVYREMREMGCQPS 246
SG KA +L +EM ++G K D+V YNT+I A +G V+ A+ + M+ G P
Sbjct: 145 SGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPD 204
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK----PREILGLF 302
V+T N++I LC GRV EA +L M C PD++T++ K PR L +
Sbjct: 205 VITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRA-LEVL 260
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
+ M I P + TY +L+ R G ++ F + +++ G PD AY +LVD L
Sbjct: 261 EEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKS 320
Query: 363 GMLDMARKYDEEMFAKGLSAK 383
G ++ A K +EM A+ + A+
Sbjct: 321 GEIEEAHKLVKEMSAREILAE 341
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 178/397 (44%), Gaps = 59/397 (14%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSIPNHATFRIMFKRYVTAHL-VNEAMGTF 90
TYN+VI L K + + L+ M + S P+ T+ + + V EA+
Sbjct: 134 TYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEIL 193
Query: 91 NKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+ + G D ++Y +++ ALC V+EA E+ K + S +N +L
Sbjct: 194 DGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEIL----KTMSCS-----PDLVTFNTLL 244
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G+ K + E EEM + ++ D+ +Y+I ++ +C+ G+ A L +E+ ++G
Sbjct: 245 DGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYI 304
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREM--REMGCQ-------PSVVTCNTVIKLLCEN 260
DV+AY +++ + S ++ A ++ +EM RE+ + P + T N V+ L ++
Sbjct: 305 PDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKD 364
Query: 261 GRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPK---M 314
G + +A ++++++ +G VPDV+TY+ L K RE L D M G P +
Sbjct: 365 GSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTL 424
Query: 315 DTYVMLLRKFGR----WGFL--------RPVFVVWKK--------------------MEE 342
+ V L + GR W + P VV+ M
Sbjct: 425 GSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRG 484
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
G + D+FAY L+ ++I G + A +EM A+G
Sbjct: 485 QGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARG 521
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 173/409 (42%), Gaps = 33/409 (8%)
Query: 5 SCYANDWKRALEFFNWVETDCHFTHTTDTY--NSVIDILGKFFEFDLSWNLIHRMKDNPS 62
+C A RALEF ++ F+ D Y N +I L K D + L M+ +
Sbjct: 72 NCKAGQATRALEFLRALD---EFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRV 128
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK---DEVSYCNLVDA-LCEYKHVI 118
+ P+ T+ + + + +A ++ G K D V+Y L++A +C+ V
Sbjct: 129 N-PDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVE 187
Query: 119 EAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
EA E+ G + +G YN I+ + G+ E E + DL
Sbjct: 188 EALEILDG----MKLAG--PAPDVITYNSIIHA---LCVAGRVVEAAEILKTMSCSPDLV 238
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+++ +D CK+G +A+++ +EM ++ I DV+ Y ++ + V A + E+
Sbjct: 239 TFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEI 298
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYA---------VLAEMPKKGCVPDVITYHCFF 289
G P V+ +++ LC++G + EA+ +LAEM VP + TY+
Sbjct: 299 VRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVL 358
Query: 290 RCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
L K I + L ++ G P + TY L+ + +R + +M LGC
Sbjct: 359 GGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCF 418
Query: 347 PDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
P++ ++V L G +D A EM K P + T L+ G
Sbjct: 419 PNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRK--RHAPNVVVYTSLIDG 465
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 43/221 (19%)
Query: 187 MCKSGKPWKAVKLYK-EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM-RVYREMREMGCQ 244
M +S +P A++ + ++ G K DV +YN ++ + V G F +VY+++ GC
Sbjct: 1 MRRSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDIL-VKSGHQFRTGKVYKDLLHSGCS 59
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGL 301
P++VT +I+ C+ G+ A L + + PDV ++ L K P + + L
Sbjct: 60 PNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKL 119
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
F+ M S + +PD F YN ++ L
Sbjct: 120 FENMESSRV-----------------------------------NPDIFTYNTVISGLCK 144
Query: 362 KGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGL--DGE 400
G L+ AR+ EEM +G + P L+ G+ DG+
Sbjct: 145 SGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGD 185
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 179/381 (46%), Gaps = 20/381 (5%)
Query: 8 ANDWKRA-LEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+ +++RA L + V+ C YN +I G+ + D + + MK S P+
Sbjct: 78 SGEFERAELVYKKLVQKGCQLDRFA--YNVLIRYFGRSGQLDSAMEMFREMKIKGSE-PD 134
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCF 125
T+ + A V EA F+ + E GL + +Y L+DA + + A L F
Sbjct: 135 EYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGL-F 193
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
E K GF V YN++L G R+ + +M G D ++YS ++
Sbjct: 194 AEMKRRGFQPSV-----VTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVN 248
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
+ KSG+ +A K+++EM +G+ +D+V YN+++ + + +D ++ +EM G P
Sbjct: 249 GLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHP 308
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF------FRCLEKPREIL 299
+ NT++ L + + A V A M + GC PD+I+Y+ F + R++L
Sbjct: 309 DAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQML 368
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ M+E+G P+ TY L+ G + F V ++ME GC PD YN L+D L
Sbjct: 369 ---EEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDML 425
Query: 360 IDKGMLDMARKYDEEMFAKGL 380
+G A + ++M KG+
Sbjct: 426 GKRGENQRAARLFQQMKDKGV 446
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 165/351 (47%), Gaps = 11/351 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +++ LGK + + M + PN T+ ++ + ++ A+G F +
Sbjct: 137 TYGFLVNALGKAGRVQEARSFFDAMLER-GLTPNIPTYNLLMDAFRKVGQLDMALGLFAE 195
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G + V +Y L+DALC V A++L F + G S + Y+ ++ G
Sbjct: 196 MKRRGFQPSVVTYNILLDALCSAGRVGAARKL-FHKMTGDGCS-----PDSYTYSTLVNG 249
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + + + EM RGV DL +Y+ + + K+G + KL KEM +KG D
Sbjct: 250 LGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPD 309
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
++NT++ A+G + D A V+ M E GC+P +++ N +I G +A +L
Sbjct: 310 AFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLE 369
Query: 272 EMPKKGCVPDVITYHCFFRCLE---KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM + G +P+ TY+ L + E + + M +G RP + TY L+ G+ G
Sbjct: 370 EMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRG 429
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ ++++M++ G PD +Y +D L LD A ++M A G
Sbjct: 430 ENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVG 480
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 126/240 (52%), Gaps = 9/240 (3%)
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++ + + + G + + + + +H+++ +DI+ SG+ +A +YK++ +KG
Sbjct: 36 LITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKG 95
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
++D AYN +IR G S +D AM ++REM+ G +P T ++ L + GRV+EA
Sbjct: 96 CQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEAR 155
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKF 324
+ M ++G P++ TY+ K ++ LGLF M G +P + TY +LL
Sbjct: 156 SFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDAL 215
Query: 325 ---GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
GR G R +F KM GCSPD + Y+ LV+ L G ++ A K EM +G++
Sbjct: 216 CSAGRVGAARKLF---HKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVA 272
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 145/319 (45%), Gaps = 12/319 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
PN T + Y + +A FN+ + F V ++ L+D L E EL
Sbjct: 30 PN--TLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGE-FERAEL 86
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ + G ++++ YN+++R + + E + EM +G D ++Y
Sbjct: 87 VYKKLVQKG----CQLDRFA-YNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFL 141
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
++ + K+G+ +A + M ++G+ ++ YN ++ A +D A+ ++ EM+ G
Sbjct: 142 VNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGF 201
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILG 300
QPSVVT N ++ LC GRV A + +M GC PD TY L K E
Sbjct: 202 QPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHK 261
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+F M++ G+ + Y LL + G + V+ + K+M G PD F++N ++DAL
Sbjct: 262 VFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALG 321
Query: 361 DKGMLDMARKYDEEMFAKG 379
D AR+ M G
Sbjct: 322 KANKPDAAREVFARMVESG 340
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 126/306 (41%), Gaps = 47/306 (15%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP--------SSIPN-----------H 67
F + TYN ++D L + L H+M + S++ N H
Sbjct: 201 FQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAH 260
Query: 68 ATFRIMFKRYVTAHLVN--EAMGTFNK----------LDEFGLK----DEVSYCNLVDAL 111
FR M R V LVN + T K + E K D S+ ++DAL
Sbjct: 261 KVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDAL 320
Query: 112 CEYKHVIEAQELCFGENKNVGFSGLVEMN-KTKI--YNMILRGWFKMSWWGKCREFWEEM 168
+ A+E+ F+ +VE K + YN+++ + + + R+ EEM
Sbjct: 321 GKANKPDAAREV---------FARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEM 371
Query: 169 DKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV 228
+ G + + +Y+ + + G+ +A + +EM+ G + DVV YN ++ +G
Sbjct: 372 VEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGEN 431
Query: 229 DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
A R++++M++ G +P ++ I L + R+ EA + +M GC D Y
Sbjct: 432 QRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRIL 491
Query: 289 FRCLEK 294
R +
Sbjct: 492 IRAAHR 497
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 90/235 (38%), Gaps = 40/235 (17%)
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
L KEM +G + +I A G A ++ + C P+V +I +L
Sbjct: 17 LLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILV 76
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCFFR----------CLEKPREI---------- 298
+G A V ++ +KGC D Y+ R +E RE+
Sbjct: 77 NSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEY 136
Query: 299 --------LG----------LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
LG FD M+E G+ P + TY +L+ F + G L ++ +M
Sbjct: 137 TYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEM 196
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+ G P YN L+DAL G + ARK +M G S P + LV G
Sbjct: 197 KRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCS--PDSYTYSTLVNG 249
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 180/379 (47%), Gaps = 14/379 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A A+ F + C + TYN++I+ L K D + L+ M DN + P
Sbjct: 21 CDAGQCSDAVLHFREMSKTC--PPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFA-P 77
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N ++ + + A+ V A+ ++ G D VSY +++ LC+ V EA C
Sbjct: 78 NVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEA---C 134
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+K + Y ++ G+ ++ E +M +RG + +Y+ M
Sbjct: 135 RVMDKMIQRGC---QPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIM 191
Query: 185 DIMCKSGKPWKAVKLYKEMKKKG-IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+C K A++L+KEM++ G DV Y+T++ ++ S VD A R+ M GC
Sbjct: 192 HGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGC 251
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF--RC-LEKPREILG 300
P+VVT ++++ LC+ G++ EA A+L M + GC P+++TY+ C L + E
Sbjct: 252 SPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYH 311
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L + M++ G +P + TY +LL F + G + + M E G P+ F YN+L+D
Sbjct: 312 LLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFC 371
Query: 361 DKGMLDMARKYDEEMFAKG 379
K ++ A + M KG
Sbjct: 372 KKDEVERACQLLSSMIQKG 390
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 178/381 (46%), Gaps = 12/381 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C D A+E + T+ + TYN+++ L + D + L M+++ S P
Sbjct: 160 CRVGDLDGAVELVRKM-TERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPP 218
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ + V + V++A + G + V+Y +L+ LC+ + EA L
Sbjct: 219 DVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALL 278
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
++ +V YN I+ G K+ + EEM G ++ +Y++ +
Sbjct: 279 QRMTRSGCSPNIV------TYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLL 332
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D CK GK A+ L + M +KG ++ YN+++ + V+ A ++ M + GC
Sbjct: 333 DAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCV 392
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGL 301
P+VV+ NTVI LC+ +V E +L +M CVPD++T++ + K + L
Sbjct: 393 PNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYEL 452
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRW-GFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
F+ + ESG P + TY L+ + F + +++ + + GCSPD YN ++D L
Sbjct: 453 FNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLC 512
Query: 361 DKGMLDMARKYDEEMFAKGLS 381
+D A K +M + GL+
Sbjct: 513 KSKRVDRAYKLFLQMLSDGLA 533
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 168/369 (45%), Gaps = 21/369 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS++D+ K E + + L+ M +PN ++ + A V+E + +
Sbjct: 362 TYNSLLDMFCKKDEVERACQLLSSMIQK-GCVPNVVSYNTVIAGLCKATKVHEGVLLLEQ 420
Query: 93 -LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK---IYNMI 148
L + D V++ ++DA+C+ V A EL F+ + E T YN +
Sbjct: 421 MLSNNCVPDIVTFNTIIDAMCKTYRVDIAYEL---------FNLIQESGCTPNLVTYNSL 471
Query: 149 LRGWFKMSWWGKCREFWEEMD-KRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
+ G K + + EM K+G D+ +Y+ +D +CKS + +A KL+ +M G
Sbjct: 472 VHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDG 531
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ D V Y+ VI ++ +D A V M + G P +T T+I C+ G + +A
Sbjct: 532 LAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKAL 591
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKF 324
+L + KG PDV+T+ F L K R+ L + M+ +G+ P TY LL+ F
Sbjct: 592 EILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGF 651
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID-KGMLDMARKYDEEMFAKGLSAK 383
+++ M + GC PD Y LV L+D K D+ + + M G K
Sbjct: 652 CDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGF--K 709
Query: 384 PREELGTKL 392
EL +KL
Sbjct: 710 LNHELSSKL 718
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 121/253 (47%), Gaps = 9/253 (3%)
Query: 138 EMNKT-----KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
EM+KT YN ++ G K EEM G ++ SY+ + CK+ +
Sbjct: 35 EMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANR 94
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
A+ L ++M +G DVV+Y TVI + + VD A RV +M + GCQP+V+T T
Sbjct: 95 VENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGT 154
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESG 309
++ C G + A ++ +M ++G P+ ITY+ L R++ L LF M ESG
Sbjct: 155 LVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESG 214
Query: 310 -IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
P + TY ++ + G + + + M GCSP+ Y++L+ L G LD A
Sbjct: 215 SCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEA 274
Query: 369 RKYDEEMFAKGLS 381
+ M G S
Sbjct: 275 TALLQRMTRSGCS 287
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 183/403 (45%), Gaps = 45/403 (11%)
Query: 37 VIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEF 96
+I +LGK + +L+H ++++ I +A + + Y + EA+ F KL+E
Sbjct: 191 IISVLGKEGRASFAASLLHDLRNDGVHIDIYA-YTSLITAYASNGRYREAVMVFKKLEEE 249
Query: 97 GLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMS 156
G + + N++ L Y + G ++ SG+ T YN ++ + S
Sbjct: 250 GCRPTLITYNVI--LNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYT--YNTLISSCRRGS 305
Query: 157 WWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
+ + E +EEM G D +Y+ +D+ KS +P +A+++ KEM+ G +V YN
Sbjct: 306 LYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYN 365
Query: 217 TVIRAVG---------------VSEGV--------------------DFAMRVYREMREM 241
++I A V +G+ D+AM+V+ EMR
Sbjct: 366 SLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVA 425
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREI 298
GCQP++ T N +IK+ G E V E+ CVPD++T++ + E+
Sbjct: 426 GCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEV 485
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
G+F M +G P+ DT+ L+ + R GF ++++M + G +PD YNA++ A
Sbjct: 486 SGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAA 545
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
L G+ + + K EM K KP E L+ +G++
Sbjct: 546 LARGGLWEQSEKVLAEM--KDGRCKPNELTYCSLLHAYANGKE 586
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 182/384 (47%), Gaps = 21/384 (5%)
Query: 4 LSCYAND--WKRALEFFNWVETD-CHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDN 60
++ YA++ ++ A+ F +E + C T TYN ++++ GK + W+ I + D+
Sbjct: 227 ITAYASNGRYREAVMVFKKLEEEGCR--PTLITYNVILNVYGKM---GMPWSKIAGLVDS 281
Query: 61 PSS---IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKH 116
S P+ T+ + L EA F ++ G D+V+Y L+D + +
Sbjct: 282 MKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRR 341
Query: 117 VIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
EA E+ E + GF+ + YN ++ + + + E +M K+G+ D
Sbjct: 342 PREAMEV-LKEMEASGFAPSI-----VTYNSLISAYARDGLLDEAMELKSQMVKKGIKPD 395
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
+ +Y+ + K+GK A+K+++EM+ G + ++ +N +I+ G M+V+
Sbjct: 396 VFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFE 455
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP- 295
E++ C P +VT NT++ + +NG E V EM + G VP+ T++ +
Sbjct: 456 EIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCG 515
Query: 296 --REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
+ + ++ RM+++G+ P + TY +L R G V +M++ C P+E Y
Sbjct: 516 FFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYC 575
Query: 354 ALVDALIDKGMLDMARKYDEEMFA 377
+L+ A + ++ EE+++
Sbjct: 576 SLLHAYANGKEVERMSALAEEIYS 599
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 106/219 (48%), Gaps = 6/219 (2%)
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
++ + ++ K G+ A L +++ G+ +D+ AY ++I A + A+ V++++ E
Sbjct: 189 AVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEE 248
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAE-MPKKGCVPDVITYHCFFRCLEKP---R 296
GC+P+++T N ++ + + G A L + M G PD+ TY+ +
Sbjct: 249 EGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYE 308
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
E +F+ M +G P TY LL +G+ R V K+ME G +P YN+L+
Sbjct: 309 EAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLI 368
Query: 357 DALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
A G+LD A + +M KG+ KP T L+ G
Sbjct: 369 SAYARDGLLDEAMELKSQMVKKGI--KPDVFTYTTLLSG 405
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 134/299 (44%), Gaps = 11/299 (3%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F DT+N++I + FD + + RM D P+ +T+ + L ++
Sbjct: 497 FVPERDTFNTLISAYSRCGFFDQAMAIYRRMLD-AGVTPDLSTYNAVLAALARGGLWEQS 555
Query: 87 MGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
++ + K +E++YC+L+ A K V L +SG++E +
Sbjct: 556 EKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALA-----EEIYSGIIEPQAVLLK 610
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
++L + K + + E+ ++G D+ + + + I + K ++ +K
Sbjct: 611 TLVLV-YSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKD 669
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G + YN+++ +E + + + RE+ G +P +++ NTVI C NGR++E
Sbjct: 670 SGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKE 729
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLL 321
A + AEM G PDVITY+ F E + + MI++G +P +TY L+
Sbjct: 730 ASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLI 788
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 158/356 (44%), Gaps = 24/356 (6%)
Query: 11 WKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
++ A E F ++ F+ TYN+++D+ GK + ++ M+ + + P+ T+
Sbjct: 307 YEEAAEVFEEMKA-AGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFA-PSIVTY 364
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDAL-----CEYKHVIEAQELC 124
+ Y L++EAM +++ + G+K +V +Y L+ +Y + +
Sbjct: 365 NSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRV 424
Query: 125 FGENKNV-GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
G N+ F+ L++M+ RG F + + +EE+ V D+ +++
Sbjct: 425 AGCQPNICTFNALIKMHGN-------RGNFV-----EMMKVFEEIKICECVPDIVTWNTL 472
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ + ++G + ++KEMK+ G + +NT+I A D AM +YR M + G
Sbjct: 473 LAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGV 532
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI--LGL 301
P + T N V+ L G ++ VLAEM C P+ +TY +E+ +
Sbjct: 533 TPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSA 592
Query: 302 FDRMIESG-IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
I SG I P+ L+ + + L + ++ E G SPD NA+V
Sbjct: 593 LAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMV 648
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 97/209 (46%), Gaps = 5/209 (2%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELC 124
P + + Y + L+ E F +L E G +++ N + ++ + ++
Sbjct: 604 PQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEI 663
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
K+ GF+ + YN ++ + + + K + E+ +G+ D+ S++ +
Sbjct: 664 LNFIKDSGFTPSL-----TTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVI 718
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
C++G+ +A +++ EMK G+ DV+ YNT I + A+ V + M + GC+
Sbjct: 719 FAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCK 778
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEM 273
P+ T N++I C+ R EA + ++ +
Sbjct: 779 PNQNTYNSLIDWFCKLNRRDEASSFISNL 807
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/380 (18%), Positives = 139/380 (36%), Gaps = 71/380 (18%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELC 124
PN TF + K + E M F +E+ C V + + ++
Sbjct: 429 PNICTFNALIKMHGNRGNFVEMMKVF---------EEIKICECVPDIVTWNTLLA----V 475
Query: 125 FGEN----------KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVV 174
FG+N K + +G V T +N ++ + + ++ + + M GV
Sbjct: 476 FGQNGMDSEVSGVFKEMKRAGFVPERDT--FNTLISAYSRCGFFDQAMAIYRRMLDAGVT 533
Query: 175 KDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF---- 230
DL +Y+ + + + G ++ K+ EMK K + + Y +++ A + V+
Sbjct: 534 PDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSAL 593
Query: 231 -------------------------------AMRVYREMREMGCQPSVVTCNTVIKLLCE 259
R + E+RE G P + T N ++ +
Sbjct: 594 AEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGR 653
Query: 260 NGRVREAYAVLAEMPKKGCVPDVITYHCFF------RCLEKPREILGLFDRMIESGIRPK 313
V + +L + G P + TY+ EK +IL +I G++P
Sbjct: 654 RRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDIL---REIIAKGMKPD 710
Query: 314 MDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDE 373
+ ++ ++ + R G ++ ++ +M++ G +PD YN + + M A +
Sbjct: 711 IISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVK 770
Query: 374 EMFAKGLSAKPREELGTKLV 393
M G KP + L+
Sbjct: 771 YMIKNG--CKPNQNTYNSLI 788
>gi|357442157|ref|XP_003591356.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480404|gb|AES61607.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 168/371 (45%), Gaps = 14/371 (3%)
Query: 13 RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
+ LEFF + F HT + ++++ ILG+ FD W L+ + ++ T +
Sbjct: 76 QTLEFFRYTGRRKGFYHTAYSLDTMLYILGRSRMFDHVWELLIEARRKDQNVITPRTVMV 135
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNV 131
+ R V + + TF K + V+ N L+ LC+ K + +A+ + N
Sbjct: 136 VLGRVAKVCSVRQTVETFRKFKKIVPDYGVNCFNALLRTLCQEKSMTDARNVYHSLKHNF 195
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
+ +N++L GW + F EM + GV D+ +Y+ +D+ CK
Sbjct: 196 -------RPNLQTFNILLSGWKNVE---DAELFVNEMKEMGVEPDVVTYNSLVDVYCKGR 245
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
+ KA K++ EM++K + DV+ Y +VI +G+ D A V +EM+E G P V N
Sbjct: 246 EIEKAYKVFDEMREKDLSPDVITYTSVIGGLGLVGQPDKARDVLKEMKEYGVYPDVPAYN 305
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIES 308
I+ C R+ A+ ++ EM KG P+ TY+ FFR ++ L+ RM+
Sbjct: 306 AAIRNYCIAKRLGIAFELVDEMVNKGLSPNATTYNLFFRVFYWSNDLQSSWNLYKRMMGE 365
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G P + + L+R F R + +W +M E G + L D L D G L A
Sbjct: 366 GCLPYTQSCMFLIRLFKRHEKMEMALQLWGEMVEKGFGSYTLVSDVLFDMLCDMGKLMEA 425
Query: 369 RKYDEEMFAKG 379
K EM KG
Sbjct: 426 EKCFLEMIEKG 436
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 7/190 (3%)
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
+ V+ +++ KK V +N ++R + + + A VY ++ +P++ T N
Sbjct: 148 QTVETFRKFKKIVPDYGVNCFNALLRTLCQEKSMTDARNVYHSLKH-NFRPNLQTFNI-- 204
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIR 311
LL V +A + EM + G PDV+TY+ K REI +FD M E +
Sbjct: 205 -LLSGWKNVEDAELFVNEMKEMGVEPDVVTYNSLVDVYCKGREIEKAYKVFDEMREKDLS 263
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
P + TY ++ G G V K+M+E G PD AYNA + L +A +
Sbjct: 264 PDVITYTSVIGGLGLVGQPDKARDVLKEMKEYGVYPDVPAYNAAIRNYCIAKRLGIAFEL 323
Query: 372 DEEMFAKGLS 381
+EM KGLS
Sbjct: 324 VDEMVNKGLS 333
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 120/288 (41%), Gaps = 47/288 (16%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
+N+++ L + + N+ H +K N PN TF I+ + V +A N++
Sbjct: 168 FNALLRTLCQEKSMTDARNVYHSLKHNFR--PNLQTFNILLSGWKN---VEDAELFVNEM 222
Query: 94 DEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
E G++ D V+Y +LVD C+ + + +A ++ F E + S V Y ++ G
Sbjct: 223 KEMGVEPDVVTYNSLVDVYCKGREIEKAYKV-FDEMREKDLSPDV-----ITYTSVIGGL 276
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
+ K R+ +EM + GV D+ +Y+ + C + + A +L EM KG+ +
Sbjct: 277 GLVGQPDKARDVLKEMKEYGVYPDVPAYNAAIRNYCIAKRLGIAFELVDEMVNKGLSPNA 336
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKL---------------- 256
YN R S + + +Y+ M GC P +C +I+L
Sbjct: 337 TTYNLFFRVFYWSNDLQSSWNLYKRMMGEGCLPYTQSCMFLIRLFKRHEKMEMALQLWGE 396
Query: 257 -------------------LCENGRVREAYAVLAEMPKKGCVPDVITY 285
LC+ G++ EA EM +KG P +++
Sbjct: 397 MVEKGFGSYTLVSDVLFDMLCDMGKLMEAEKCFLEMIEKGQRPSNVSF 444
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
++KG + +T++ +G S D + E R +V+T TV+ +L +V
Sbjct: 86 RRKGFYHTAYSLDTMLYILGRSRMFDHVWELLIEARRK--DQNVITPRTVMVVLGRVAKV 143
Query: 264 REAYAVLAEMPK-KGCVPD--VITYHCFFR--CLEKPREILGLFDRMIESGIRPKMDTYV 318
+ K K VPD V ++ R C EK ++ RP + T+
Sbjct: 144 CSVRQTVETFRKFKKIVPDYGVNCFNALLRTLCQEKSMTDARNVYHSLKHNFRPNLQTFN 203
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+LL W + + +M+E+G PD YN+LVD ++ A K +EM K
Sbjct: 204 ILL---SGWKNVEDAELFVNEMKEMGVEPDVVTYNSLVDVYCKGREIEKAYKVFDEMREK 260
Query: 379 GLS 381
LS
Sbjct: 261 DLS 263
>gi|255547888|ref|XP_002515001.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546052|gb|EEF47555.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 466
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 182/389 (46%), Gaps = 25/389 (6%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+ +DWK AL F W E+ + H+ + Y++++DI+GK + D L+ M+
Sbjct: 61 FKDDWKSALGVFRWAESRAGYKHSPEAYDTMVDIMGKMKQMDQMEFLLEEMEKG-----Q 115
Query: 67 HATFRIM---FKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV-DALCEYKHVIEAQE 122
H T + + +R+ A + F+KL FGL+ NL+ D LC+ + V A+E
Sbjct: 116 HVTLKTVGKAMRRFAGARQWENVLRVFDKLGTFGLEKNTESMNLLLDTLCKERKVELARE 175
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ ++ + +N+ + GW K++ + +EM G + SYS
Sbjct: 176 IFLDLKSHISPNA-------NTFNIFIHGWCKVNRVEEAYWTIQEMKGHGCTPCVISYST 228
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ C K +L EM+ +G+ +VV Y +V+ A+ SE + A+++ + M+ +G
Sbjct: 229 IVQFYCHRSNFSKVYELLDEMEAQGLIPNVVTYTSVMSALAKSEEYEEALQIAQRMKSVG 288
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVL-AEMPKKGCVPDVITYHCFFRCL---EKPREI 298
C+P + N++I L + GR EA V EMP G P+ TY+ L + R+
Sbjct: 289 CKPDTLFYNSLIHTLGKAGRPEEAIQVFEVEMPNTGVPPNTSTYNSMIAMLCHHSQERKA 348
Query: 299 LGLFDRMIESGI--RPKMDTYVMLLRKFGRWGFLRPVF--VVWKKMEELGCSPDEFAYNA 354
L L + IE+ I +P + TY LL+ + G + + ++ +++ S D AY
Sbjct: 349 LNLL-KEIEASIICKPDVQTYYPLLKSCFKAGSIDSLLSQLLDDMVKKHHLSLDFSAYTL 407
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLSAK 383
LV L + A EEM K ++ K
Sbjct: 408 LVHGLCRANKCEWAYCLFEEMIGKDMTPK 436
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 183/403 (45%), Gaps = 45/403 (11%)
Query: 37 VIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEF 96
+I +LGK + +L+H ++++ I +A + + Y + EA+ F KL+E
Sbjct: 191 IISVLGKEGRASFAASLLHDLRNDGVHIDIYA-YTSLITAYASNGRYREAVMVFKKLEEE 249
Query: 97 GLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMS 156
G + + N++ L Y + G ++ SG+ T YN ++ + S
Sbjct: 250 GCRPTLITYNVI--LNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYT--YNTLISSCRRGS 305
Query: 157 WWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
+ + E +EEM G D +Y+ +D+ KS +P +A+++ KEM+ G +V YN
Sbjct: 306 LYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYN 365
Query: 217 TVIRAVG---------------VSEGV--------------------DFAMRVYREMREM 241
++I A V +G+ D+AM+V+ EMR
Sbjct: 366 SLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVA 425
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREI 298
GCQP++ T N +IK+ G E V E+ CVPD++T++ + E+
Sbjct: 426 GCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEV 485
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
G+F M +G P+ DT+ L+ + R GF ++++M + G +PD YNA++ A
Sbjct: 486 SGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAA 545
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
L G+ + + K EM K KP E L+ +G++
Sbjct: 546 LARGGLWEQSEKVLAEM--KDGRCKPNELTYCSLLHAYANGKE 586
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 182/384 (47%), Gaps = 21/384 (5%)
Query: 4 LSCYAND--WKRALEFFNWVETD-CHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDN 60
++ YA++ ++ A+ F +E + C T TYN ++++ GK + W+ I + D+
Sbjct: 227 ITAYASNGRYREAVMVFKKLEEEGCR--PTLITYNVILNVYGKM---GMPWSKIAGLVDS 281
Query: 61 PSS---IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKH 116
S P+ T+ + L EA F ++ G D+V+Y L+D + +
Sbjct: 282 MKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRR 341
Query: 117 VIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
EA E+ E + GF+ + YN ++ + + + E +M K+G+ D
Sbjct: 342 PREAMEV-LKEMEASGFAPSI-----VTYNSLISAYARDGLLDEAMELKSQMVKKGIKPD 395
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
+ +Y+ + K+GK A+K+++EM+ G + ++ +N +I+ G M+V+
Sbjct: 396 VFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFE 455
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP- 295
E++ C P +VT NT++ + +NG E V EM + G VP+ T++ +
Sbjct: 456 EIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCG 515
Query: 296 --REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
+ + ++ RM+++G+ P + TY +L R G V +M++ C P+E Y
Sbjct: 516 FFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYC 575
Query: 354 ALVDALIDKGMLDMARKYDEEMFA 377
+L+ A + ++ EE+++
Sbjct: 576 SLLHAYANGKEVERMSALAEEIYS 599
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 106/219 (48%), Gaps = 6/219 (2%)
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
++ + ++ K G+ A L +++ G+ +D+ AY ++I A + A+ V++++ E
Sbjct: 189 AVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEE 248
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAE-MPKKGCVPDVITYHCFFRCLEKP---R 296
GC+P+++T N ++ + + G A L + M G PD+ TY+ +
Sbjct: 249 EGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYE 308
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
E +F+ M +G P TY LL +G+ R V K+ME G +P YN+L+
Sbjct: 309 EAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLI 368
Query: 357 DALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
A G+LD A + +M KG+ KP T L+ G
Sbjct: 369 SAYARDGLLDEAMELKSQMVKKGI--KPDVFTYTTLLSG 405
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 133/299 (44%), Gaps = 11/299 (3%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F DT+N++I + FD + + RM D P+ +T+ + L ++
Sbjct: 497 FVPERDTFNTLISAYSRCGFFDQAMAIYRRMLD-AGVTPDLSTYNAVLAALARGGLWEQS 555
Query: 87 MGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
++ + K +E++YC+L+ A K V L +SG++E +
Sbjct: 556 EKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALA-----EEIYSGIIEPQAVLLK 610
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
++L + K + + E+ ++G D+ + + + I + K ++ +K
Sbjct: 611 TLVLV-YSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKD 669
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G + YN+++ +E + + + RE+ G +P +++ NTVI C NGR++E
Sbjct: 670 SGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKE 729
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLL 321
A + AEM G PDVITY+ F E + + MI++ +P +TY L+
Sbjct: 730 ASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLI 788
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 158/356 (44%), Gaps = 24/356 (6%)
Query: 11 WKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
++ A E F ++ F+ TYN+++D+ GK + ++ M+ + + P+ T+
Sbjct: 307 YEEAAEVFEEMKA-AGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFA-PSIVTY 364
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDAL-----CEYKHVIEAQELC 124
+ Y L++EAM +++ + G+K +V +Y L+ +Y + +
Sbjct: 365 NSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRV 424
Query: 125 FGENKNV-GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
G N+ F+ L++M+ RG F + + +EE+ V D+ +++
Sbjct: 425 AGCQPNICTFNALIKMHGN-------RGNFV-----EMMKVFEEIKICECVPDIVTWNTL 472
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ + ++G + ++KEMK+ G + +NT+I A D AM +YR M + G
Sbjct: 473 LAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGV 532
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI--LGL 301
P + T N V+ L G ++ VLAEM C P+ +TY +E+ +
Sbjct: 533 TPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSA 592
Query: 302 FDRMIESG-IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
I SG I P+ L+ + + L + ++ E G SPD NA+V
Sbjct: 593 LAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMV 648
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 96/209 (45%), Gaps = 5/209 (2%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELC 124
P + + Y + L+ E F +L E G +++ N + ++ + ++
Sbjct: 604 PQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEI 663
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
K+ GF+ + YN ++ + + + K + E+ +G+ D+ S++ +
Sbjct: 664 LNFIKDSGFTPSL-----TTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVI 718
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
C++G+ +A +++ EMK G+ DV+ YNT I + A+ V + M + C+
Sbjct: 719 FAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECK 778
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEM 273
P+ T N++I C+ R EA + ++ +
Sbjct: 779 PNQNTYNSLIDWFCKLNRRDEANSFISNL 807
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 132/333 (39%), Gaps = 34/333 (10%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELC 124
PN TF + K + E M F +E+ C V + + ++
Sbjct: 429 PNICTFNALIKMHGNRGNFVEMMKVF---------EEIKICECVPDIVTWNTLLA----V 475
Query: 125 FGEN----------KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVV 174
FG+N K + +G V T +N ++ + + ++ + + M GV
Sbjct: 476 FGQNGMDSEVSGVFKEMKRAGFVPERDT--FNTLISAYSRCGFFDQAMAIYRRMLDAGVT 533
Query: 175 KDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRV 234
DL +Y+ + + + G ++ K+ EMK K + + Y +++ A + V+ +
Sbjct: 534 PDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSAL 593
Query: 235 YREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF----- 289
E+ +P V T++ + ++ + E E+ ++G PD+ T +
Sbjct: 594 AEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGR 653
Query: 290 -RCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
R + K EIL +SG P + TY L+ + R + +++ G PD
Sbjct: 654 RRMVSKTNEILNFIK---DSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPD 710
Query: 349 EFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
++N ++ A G + A + EM GL+
Sbjct: 711 IISFNTVIFAYCRNGRMKEASRIFAEMKDFGLA 743
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 159/358 (44%), Gaps = 50/358 (13%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PNH TF ++ + + + +A+ T + + FGL D V+Y L+ A C + EA+ L
Sbjct: 208 PNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTL 267
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
K G+ T YN ++ + ++ W + E M G DL +Y++
Sbjct: 268 LARMKKE----GIAPTRAT--YNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVL 321
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGI-KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+C++GK +A KL EM+ I DVV YNT++ A + A+ + EMR+ G
Sbjct: 322 AAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKG 381
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLF 302
+ S+VT N V+K LC G++ EA L M ++G PDVITY+ K R + F
Sbjct: 382 VKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAF 441
Query: 303 ---DRMIESGIRPKMDTYVM------------------LLRKFGRWGFL----------- 330
D M+ SG+ KMDT+ + LLR + GF+
Sbjct: 442 VLMDEMVRSGL--KMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMA 499
Query: 331 --------RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
P +W +M + +P + YN L+ L G L A E+ KGL
Sbjct: 500 AYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGL 557
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 153/348 (43%), Gaps = 10/348 (2%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN+++ + + L+ RMK P AT+ + Y + +A
Sbjct: 247 TYNTLLKAHCRKGMLGEARTLLARMKKE-GIAPTRATYNTLVSAYARLGWIKQATNVVEA 305
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ FG + ++ +Y L LC+ V EA F + +V + YN ++
Sbjct: 306 MTAFGFEPDLWTYNVLAAGLCQAGKVDEA----FKLKDEMEHLSIVSPDVV-TYNTLVDA 360
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
FK EEM +GV L +++I + +C+ G+ +A+ K M ++G+ D
Sbjct: 361 CFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPD 420
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V+ YNT+I A + V A + EM G + T NT++ LC+ R EA +L
Sbjct: 421 VITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLR 480
Query: 272 EMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
P++G VPD ++Y KP L L+D M + + P + TY L++ G
Sbjct: 481 SPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIG 540
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
L ++ + G PD+ YN ++ A +G L+ A ++ +M
Sbjct: 541 KLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKML 588
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 175/400 (43%), Gaps = 24/400 (6%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDN--PSS 63
C A A + + +E + TYN+++D K+ + NL+ M+D SS
Sbjct: 326 CQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSS 385
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQE 122
+ H I+ K + EA+G + E GL D ++Y L+DA C+ ++V +A
Sbjct: 386 LVTH---NIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKA-- 440
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
F + SGL +M+ T N +L K + + E +RG V D SY
Sbjct: 441 --FVLMDEMVRSGL-KMD-TFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGT 496
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
M K KP A+ L+ EM K+ + + YNT+I+ + + A+ E+ + G
Sbjct: 497 VMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKG 556
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREIL 299
P T N +I C+ G + +A+ +M + PDV+T + CL K + +
Sbjct: 557 LVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAI 616
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
LF+ E G + + TY L++ + G + + ME G PD F YN ++ AL
Sbjct: 617 KLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSAL 676
Query: 360 IDKG----MLDMARKYDE-----EMFAKGLSAKPREELGT 390
+ G +M K DE E F+ L EE+ T
Sbjct: 677 SEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKT 716
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 169/392 (43%), Gaps = 49/392 (12%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TYN+++ + + N++ M P+ T+ ++ A V+EA
Sbjct: 279 TRATYNTLVSAYARLGWIKQATNVVEAMTAF-GFEPDLWTYNVLAAGLCQAGKVDEAFKL 337
Query: 90 FNKLDEFGL--KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGF-SGLVEMNKTKIYN 146
++++ + D V+Y LVDA +Y+ +A L E ++ G S LV +N
Sbjct: 338 KDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNL-LEEMRDKGVKSSLV------THN 390
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++++G + + + M + G+ D+ +Y+ +D CK+ KA L EM +
Sbjct: 391 IVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRS 450
Query: 207 GIKMDV-----------------------------------VAYNTVIRAVGVSEGVDFA 231
G+KMD V+Y TV+ A + A
Sbjct: 451 GLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPA 510
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC 291
+ ++ EM + PS+ T NT+IK LC G++ EA L E+ KKG VPD TY+
Sbjct: 511 LYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHA 570
Query: 292 LEKPREILGLF---DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
K ++ F ++M+E+ +P + T L+ G L +++ E G D
Sbjct: 571 YCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVD 630
Query: 349 EFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
YN L+ AL G +D A + +M A+GL
Sbjct: 631 VITYNTLIQALCKDGDVDTALHFFADMEARGL 662
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 12/192 (6%)
Query: 193 PWKAVKLYKEMKKKG-IKMDVVAYNTVIRAVGVSEGVD--FAMRVYREMREMGCQPSVVT 249
P A +L +++G ++ + A N V+ A+ S ++ V+R + + P+ T
Sbjct: 153 PHLAAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYT 212
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREILGLFD 303
N ++ C G + +A + L+ M G PDV+TY HC L + R +L
Sbjct: 213 FNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLA--- 269
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
RM + GI P TY L+ + R G+++ V + M G PD + YN L L G
Sbjct: 270 RMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAG 329
Query: 364 MLDMARKYDEEM 375
+D A K +EM
Sbjct: 330 KVDEAFKLKDEM 341
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 7/227 (3%)
Query: 163 EFWEEMDKRGVVK-DLHSYSIYMDIMCKSGK--PWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+ +RG V+ L + + + + +S P ++ +++ + + + +N ++
Sbjct: 158 QLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLV 217
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
+ A+ M+ G P VVT NT++K C G + EA +LA M K+G
Sbjct: 218 HTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIA 277
Query: 280 PDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVV 336
P TY+ + ++ + + M G P + TY +L + G + F +
Sbjct: 278 PTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKL 337
Query: 337 WKKMEELG-CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ME L SPD YN LVDA A EEM KG+ +
Sbjct: 338 KDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKS 384
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 126/300 (42%), Gaps = 22/300 (7%)
Query: 4 LSCYANDWKRALEFFNWVE-TDCHFTHTTDTYNSVID---ILGKFFEFDLSWNLIHRMKD 59
++ Y + K + W E + T + TYN++I +GK E N + +
Sbjct: 498 MAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKK-- 555
Query: 60 NPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVI 118
+P+ T+ I+ Y + +A NK+ E K +V CN L++ LC + +
Sbjct: 556 --GLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLE 613
Query: 119 EAQELCFGENKNVGFSGLVEMNK---TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVK 175
+A +L F E K YN +++ K F+ +M+ RG+
Sbjct: 614 KAIKL---------FESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQP 664
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTV-IRAVGVSEGVDFAMRV 234
D +Y++ + + ++G+ +A + ++ + G + +Y + A V G D ++
Sbjct: 665 DAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKS 724
Query: 235 YREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
E + N +K LC G+++EA AVL EM +KG D TY L K
Sbjct: 725 DCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIK 784
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 167/360 (46%), Gaps = 18/360 (5%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
+T Y +I L K FD ++ L+H M+ A + + + V EA
Sbjct: 41 YTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIA-YSTIINWLCKLNRVEEA 99
Query: 87 MGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEA----QELCFGENKNVGFSGLVEMNKT 142
K+ + D ++Y +V+ LC+ K + +A +E+ K F
Sbjct: 100 RELIEKMARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAF--------- 150
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
IYN +L G + + R +E+M K+ + ++ +Y+ ++ +CK+ + A +L+KE
Sbjct: 151 -IYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKE 209
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M KG V+YNT+I + + A V+ +M C P+VVT T+I L ++G+
Sbjct: 210 MAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGK 269
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVM 319
V+ A VL M KKG P+V TY C K R E L ++M+ GI P + TY +
Sbjct: 270 VQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNI 329
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
LL R L F +++ M + C P YN L+ AL LD A + EM AKG
Sbjct: 330 LLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKG 389
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 149/323 (46%), Gaps = 13/323 (4%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQE 122
IP ATF + + A + + + + E G S Y L+ LC+ + EA +
Sbjct: 7 IPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYK 66
Query: 123 LCFGENKNVGFSGLVEMNKTKI-YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
L L + I Y+ I+ K++ + RE E+M R D +Y
Sbjct: 67 LLHTMR-------LKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYG 118
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
++ +CK+ + A+ +EM +GIK D YN V+ + E V+ A ++ +M +
Sbjct: 119 PIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQ 178
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG- 300
P+VVT NT+I LC+ R+ AY + EM KG VP ++Y+ K ++++
Sbjct: 179 RINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAA 238
Query: 301 --LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+FD+M+ S P + TY L+ + G ++ V M + G +P+ Y+ L+D
Sbjct: 239 KDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDG 298
Query: 359 LIDKGMLDMARKYDEEMFAKGLS 381
+D A K E+M +G++
Sbjct: 299 FCKVRRVDEAHKLLEQMVTQGIA 321
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 114/225 (50%), Gaps = 13/225 (5%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL 123
PN T+ + A + A F ++ G + EVSY L+D C+ K ++ A+++
Sbjct: 182 PNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDV 241
Query: 124 CFGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
F +V N Y ++ G K E + M K+GV ++ +Y
Sbjct: 242 ---------FDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATY 292
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
S +D CK + +A KL ++M +GI VV YN ++ ++ ++ ++ A +++R M +
Sbjct: 293 SCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQ 352
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
C P+VVT NT+++ LC + ++ A+ + AEM KGC PD ITY
Sbjct: 353 RRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITY 397
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 119/245 (48%), Gaps = 14/245 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++I+ L K + + ++ L M +P ++ + + + A F+K
Sbjct: 186 TYNTLINGLCKAWRIETAYELFKEMAGK-GYVPTEVSYNTLIDGFCKKKDLVAAKDVFDK 244
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKT---KIYNMI 148
+ + + V+Y L+D L + V A E+ G+V+ T Y+ +
Sbjct: 245 MVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEV---------LDGMVKKGVTPNVATYSCL 295
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G+ K+ + + E+M +G+ + +Y+I ++ +C++ K A KL++ M ++
Sbjct: 296 IDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRC 355
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
VV YNT++RA+ + +D A R+Y EM GC P +T +T+ L G+V EA
Sbjct: 356 HPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQE 415
Query: 269 VLAEM 273
++ +M
Sbjct: 416 LMEKM 420
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 4/215 (1%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M R V+ +++ D K+G+ + ++Y+ M + G + Y +I +
Sbjct: 1 MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
D A ++ MR + + +T+I LC+ RV EA ++ +M + PD +TY
Sbjct: 61 FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGP 119
Query: 288 FFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
L K + I L + M GI+P Y +L + + ++++KM +
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+P+ YN L++ L ++ A + +EM KG
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKG 214
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 84/193 (43%), Gaps = 8/193 (4%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
+ T +YN++ID K + + ++ +M + + +PN T+ + + V A
Sbjct: 215 YVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRS-NCVPNVVTYTTLIDGLSKSGKVQAA 273
Query: 87 MGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
+ + + G+ V +Y L+D C+ + V EA +L + + G+ T Y
Sbjct: 274 AEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLL----EQMVTQGIAPTVVT--Y 327
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N++L + + + M +R + +Y+ + +C + A +LY EM
Sbjct: 328 NILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIA 387
Query: 206 KGIKMDVVAYNTV 218
KG D + Y+T+
Sbjct: 388 KGCPPDAITYDTL 400
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 123/237 (51%), Gaps = 3/237 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN +L+G + W K E ++EMD GV D+ S++I + C+ G+ +A+K+YKEM+
Sbjct: 168 YNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMR 227
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+GIK D+V+++ +I +D AM REMR G P V VI C G +
Sbjct: 228 HRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMS 287
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLL 321
+A V EM GC+PDV+TY+ L K R +L GL + M E G+ P + T+ L+
Sbjct: 288 DALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLI 347
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+ G L ++ M PD YN L+D + +G LD A ++M ++
Sbjct: 348 HGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSR 404
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 166/381 (43%), Gaps = 34/381 (8%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNSV+ L + +D +W + M D+ P+ +F I+ + + EA+ + +
Sbjct: 167 TYNSVLKGLCRSGMWDKAWEVFKEM-DDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKE 225
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL-----CFGENKNV--------GF--SGL 136
+ G+K D VS+ L+ + A CFG + GF +GL
Sbjct: 226 MRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGL 285
Query: 137 VE--------------MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ + YN +L G K EM +RGV DL +++
Sbjct: 286 MSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTT 345
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ C GK KA++L+ M + ++ D+V YNT+I + +D A ++ +M
Sbjct: 346 LIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE 405
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---L 299
P+ VT + +I CE G+V +A+ L EM KG +P+++TY+ + + +
Sbjct: 406 IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQ 465
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+M+ + + P + TY L+ + + + F + ME+ PD YN L++
Sbjct: 466 KFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGF 525
Query: 360 IDKGMLDMARKYDEEMFAKGL 380
G + A E+M AKG+
Sbjct: 526 SVHGNVQEAGWIFEKMCAKGI 546
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 121/266 (45%), Gaps = 6/266 (2%)
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
FS E+N T N+++ + K + K EM+KR V D+ ++++ +D ++G
Sbjct: 87 FSSNSEVN-TYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGD 145
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
A+ L M KG+K +V YN+V++ + S D A V++EM + G P V +
Sbjct: 146 AEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTI 205
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC---FFRCLEKPREILGLFDRMIESG 309
+I C G + EA + EM +G PD++++ C F K + M G
Sbjct: 206 LIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFG 265
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
+ P Y M++ F R G + V +M GC PD YN L++ L + L A
Sbjct: 266 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE 325
Query: 370 KYDEEMFAKGLSAKPREELGTKLVQG 395
EM +G+ P T L+ G
Sbjct: 326 GLLNEMRERGVP--PDLCTFTTLIHG 349
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 142/315 (45%), Gaps = 35/315 (11%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQE 122
+P+ + ++ + A L+++A+ +++ G L D V+Y L++ LC+ + +++A+
Sbjct: 267 VPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEG 326
Query: 123 LCFGENKNVG-------FSGLVE------------------MNK-----TKIYNMILRGW 152
L E + G F+ L+ +N+ YN ++ G
Sbjct: 327 L-LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGM 385
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
+ K + W++M R + + +YSI +D C+ G+ A EM KGI ++
Sbjct: 386 CRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNI 445
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
+ YN++I+ S V + ++M P ++T NT+I + ++ +A+ +L
Sbjct: 446 MTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNM 505
Query: 273 MPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M K+ PDV+TY+ F +E +F++M GI P TY+ ++ G
Sbjct: 506 MEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGN 565
Query: 330 LRPVFVVWKKMEELG 344
+ F + +M + G
Sbjct: 566 SKEAFQLHDEMLQRG 580
>gi|122236160|sp|Q0WP85.1|PP150_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g13420, mitochondrial; Flags: Precursor
gi|110738270|dbj|BAF01064.1| hypothetical protein [Arabidopsis thaliana]
Length = 509
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 189/403 (46%), Gaps = 44/403 (10%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+TL ++ K AL FF ++ + + T ++N +IDILG+ +FD+ LI M
Sbjct: 76 QTLLRLRHNSKIALSFFQYLRSLPSPSTTPTSFNLIIDILGRVRQFDVVRQLIVEMDQT- 134
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFN-----------KLDEFGLKDEVSYCNLVDA 110
+ TF I+ KR + A L +A+ F+ +L EFG L+D
Sbjct: 135 ----SPETFLILVKRLIAAGLTRQAVRAFDDAPCFLENRRFRLVEFGF--------LLDT 182
Query: 111 LCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDK 170
LC+Y + A + F E K S K+Y +++ GW K+ +F EM +
Sbjct: 183 LCKYGYTKMAVGV-FNERKEEFGSD------EKVYTILIAGWCKLRRIDMAEKFLVEMIE 235
Query: 171 RGVVKDLHSYSIYMDIMCKSGK--PWK--------AVKLYKEMKKKGIKMDVVAYNTVIR 220
G+ ++ +Y++ ++ +C++ P + A K++ EM+++GI+ DV +++ V+
Sbjct: 236 SGIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEMRQRGIEPDVTSFSIVLH 295
Query: 221 AVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVP 280
+ + + + M+ G P++ T +V+K LC GR+ EA +L M + G P
Sbjct: 296 MYSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELLETMVESGISP 355
Query: 281 DVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVW 337
TY+CFF+ + ++ G L+ +M +P TY +LL F G + V +W
Sbjct: 356 SSATYNCFFKEYKGRKDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFINLGKMETVKEIW 415
Query: 338 KKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
++ PD +Y +LV L K A Y EM +G
Sbjct: 416 DDLKASETGPDLDSYTSLVHGLCSKEKWKEACGYFVEMIERGF 458
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 166/351 (47%), Gaps = 11/351 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+ S+ID LGK D ++ L +M D+ IPN + + K + + F +
Sbjct: 479 TFCSLIDGLGKQGRVDDAYRLYEQMLDS-DKIPNAVVYTSLIKSFFKCGRKEDGHKIFKE 537
Query: 93 LDEFGLKDEVSYCNL-VDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G ++ N +D + + + + L F E K+ GF + Y++++ G
Sbjct: 538 MIHRGCSPDLRLLNAYMDCVFKAGETGKGRAL-FEEIKSRGF-----IPDVMSYSILIHG 591
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + + E + M ++G V D H+Y+ ++D CKSGK KA +L +EMK KG +
Sbjct: 592 LVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPT 651
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
VV Y +VI + + +D A ++ E + G + +VV +++I + GR+ EAY ++
Sbjct: 652 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIME 711
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
E+ +KG P+V T++C L K EI L F M P TY +L+ R
Sbjct: 712 ELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVR 771
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
FV W++M++ G P+ Y ++ L G + A E A G
Sbjct: 772 KFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANG 822
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 191/415 (46%), Gaps = 38/415 (9%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
AL F ++ D TYN +ID+L K E + ++ + MK+ PN T IM
Sbjct: 392 ALRTFEEMKKDA--APNLSTYNVLIDMLCKAGEVEAAFKVRDAMKE-AGLFPNVMTVNIM 448
Query: 74 FKRYVTAHLVNEAMGTFNKLD-EFGLKDEVSYCNLVDALCEYKHVIEAQEL---CFGENK 129
R A ++EA F ++ + DEV++C+L+D L + V +A L +K
Sbjct: 449 IDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDK 508
Query: 130 ---NVGFSGLVEM--------NKTKIYN-MILRGW--------------FKMSWWGKCRE 163
V ++ L++ + KI+ MI RG FK GK R
Sbjct: 509 IPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRA 568
Query: 164 FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
+EE+ RG + D+ SYSI + + K+G + +L+ MK++G +D AYNT I
Sbjct: 569 LFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFC 628
Query: 224 VSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVI 283
S V+ A ++ EM+ G QP+VVT +VI L + R+ EAY + E G +V+
Sbjct: 629 KSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVV 688
Query: 284 TYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
Y F + + E + + +++ G+ P + T+ LL + + V ++ M
Sbjct: 689 IYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNM 748
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+ L +P+ Y+ L++ L + A + +EM +GL KP T ++ G
Sbjct: 749 KNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGL--KPNTITYTTMIAG 801
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 173/405 (42%), Gaps = 48/405 (11%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
AL + ++++C YN ID GK + D++W H +K + +P+ T+ M
Sbjct: 252 ALSLLDEMKSNCLHADIV-LYNVCIDCFGKAGKVDMAWKFFHEIKSH-GLLPDDVTYTSM 309
Query: 74 FKRYVTAHLVNEAMGTFNKLDEF-GLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
+ ++EA+ F ++++ + +Y ++ EA L +
Sbjct: 310 IGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGC 369
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
++ YN IL K G+ +EEM K+ +L +Y++ +D++CK+G+
Sbjct: 370 IPSVIA------YNCILTCLGKKGRLGEALRTFEEM-KKDAAPNLSTYNVLIDMLCKAGE 422
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVI----------RAVGVSEG--------------- 227
A K+ MK+ G+ +V+ N +I A + EG
Sbjct: 423 VEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCS 482
Query: 228 ----------VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
VD A R+Y +M + P+ V ++IK + GR + + + EM +G
Sbjct: 483 LIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRG 542
Query: 278 CVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
C PD+ + + C+ K E LF+ + G P + +Y +L+ + GF R +
Sbjct: 543 CSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETY 602
Query: 335 VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++ M+E GC D AYN +D G ++ A + EEM KG
Sbjct: 603 ELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKG 647
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 165/392 (42%), Gaps = 14/392 (3%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A D +A+ +F W E + Y+S++ ++ K +FD ++ M P+
Sbjct: 105 AKDVNQAISYFRWTERKTDQALCPEAYDSLLLVMAKNVKFDYFEQILGEMSIAGFG-PST 163
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFG 126
T + + ++ + E + +F + S Y L+ AL + + F
Sbjct: 164 KTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQES-DIMLTLFH 222
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
+ + +G+ V + + ++R + + +EM + D+ Y++ +D
Sbjct: 223 QMQELGYEVSVHL-----FTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDC 277
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
K+GK A K + E+K G+ D V Y ++I + +D A+ ++ +M + P
Sbjct: 278 FGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPC 337
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFD 303
NT+I G+ EAY++L +GC+P VI Y+C CL K E L F+
Sbjct: 338 AYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFE 397
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
M + P + TY +L+ + G + F V M+E G P+ N ++D L
Sbjct: 398 EMKKDA-APNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAK 456
Query: 364 MLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
LD A E M K S P E L+ G
Sbjct: 457 KLDEACSIFEGMNHKICS--PDEVTFCSLIDG 486
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 114/250 (45%), Gaps = 11/250 (4%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TY SVID L K D ++ L K N + N + + + ++EA
Sbjct: 651 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLEL-NVVIYSSLIDGFGKVGRIDEAYLI 709
Query: 90 FNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
+L + GL V N L+DAL + + + EA +CF KN L Y+++
Sbjct: 710 MEELMQKGLTPNVYTWNCLLDALVKAEEINEAL-VCFQNMKN-----LKGTPNHITYSIL 763
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G ++ + K FW+EM K+G+ + +Y+ + + K+G +A L++ K G
Sbjct: 764 INGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGG 823
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY- 267
D +YN +I + S A +++ E R GC TC ++ L ++ + +A
Sbjct: 824 VPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQAAI 883
Query: 268 --AVLAEMPK 275
AVL E+ K
Sbjct: 884 VGAVLREIAK 893
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 137/301 (45%), Gaps = 11/301 (3%)
Query: 50 SWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLV 108
++ L + MK+ + HA + + + VN+A ++ G + V +Y +++
Sbjct: 601 TYELFYAMKEQGCVLDTHA-YNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVI 659
Query: 109 DALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM 168
D L + + EA L F E K+ G +E+N IY+ ++ G+ K+ + EE+
Sbjct: 660 DGLAKIDRLDEAYML-FEEAKSNG----LELNVV-IYSSLIDGFGKVGRIDEAYLIMEEL 713
Query: 169 DKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV 228
++G+ ++++++ +D + K+ + +A+ ++ MK + + Y+ +I +
Sbjct: 714 MQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKF 773
Query: 229 DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
+ A ++EM++ G +P+ +T T+I L + G + EA ++ G VPD +Y+
Sbjct: 774 NKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAI 833
Query: 289 FRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
L R E +F+ G T + LL + L +V + E+
Sbjct: 834 IEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQAAIVGAVLREIAK 893
Query: 346 S 346
S
Sbjct: 894 S 894
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 123/237 (51%), Gaps = 3/237 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN +L+G + W K E ++EMD GV D+ S++I + C+ G+ +A+K+YKEM+
Sbjct: 229 YNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMR 288
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+GIK D+V+++ +I +D AM REMR G P V VI C G +
Sbjct: 289 HRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMS 348
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLL 321
+A V EM GC+PDV+TY+ L K R +L GL + M E G+ P + T+ L+
Sbjct: 349 DALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLI 408
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+ G L ++ M PD YN L+D + +G LD A ++M ++
Sbjct: 409 HGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSR 465
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 151/340 (44%), Gaps = 27/340 (7%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNSV+ L + +D +W + M D+ P+ +F I+ + + EA+ + +
Sbjct: 228 TYNSVLKGLCRSGMWDKAWEVFKEM-DDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKE 286
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL-----CFGENKNVGFSGLVEMNKTKIYN 146
+ G+K D VS+ L+ + A CFG LV IY
Sbjct: 287 MRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFG---------LVP--DGVIYT 335
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
M++ G+ + +EM G + D+ +Y+ ++ +CK + A L EM+++
Sbjct: 336 MVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER 395
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
G+ D+ + T+I + +D A++++ M +P +VT NT+I +C G + +A
Sbjct: 396 GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKA 455
Query: 267 YAVLAEMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVML 320
+ +M + P+ +TY HC +E + G D MI GI P + TY +
Sbjct: 456 NDLWDDMHSREIFPNHVTYSILIDSHCEKGQVE---DAFGFLDEMINKGILPNIMTYNSI 512
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
++ + R G + +KM SPD YN L+ I
Sbjct: 513 IKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYI 552
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 116/251 (46%), Gaps = 4/251 (1%)
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
FS E+N T N+++ + K + K EM+KR V D+ ++++ +D ++G
Sbjct: 148 FSSNSEVN-TYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGD 206
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
A+ L M KG+K +V YN+V++ + S D A V++EM + G P V +
Sbjct: 207 AEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTI 266
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC---FFRCLEKPREILGLFDRMIESG 309
+I C G + EA + EM +G PD++++ C F K + M G
Sbjct: 267 LIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFG 326
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
+ P Y M++ F R G + V +M GC PD YN L++ L + L A
Sbjct: 327 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE 386
Query: 370 KYDEEMFAKGL 380
EM +G+
Sbjct: 387 GLLNEMRERGV 397
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 146/320 (45%), Gaps = 35/320 (10%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQE 122
+P+ + ++ + A L+++A+ +++ G L D V+Y L++ LC+ + +++A+
Sbjct: 328 VPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEG 387
Query: 123 LCFGENKNVG-------FSGLVE------------------MNK-----TKIYNMILRGW 152
L E + G F+ L+ +N+ YN ++ G
Sbjct: 388 L-LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGM 446
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
+ K + W++M R + + +YSI +D C+ G+ A EM KGI ++
Sbjct: 447 CRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNI 506
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
+ YN++I+ S V + ++M P ++T NT+I + ++ +A+ +L
Sbjct: 507 MTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNM 566
Query: 273 MPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M K+ PDV+TY+ F +E +F++M GI P TY+ ++ G
Sbjct: 567 MEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGN 626
Query: 330 LRPVFVVWKKMEELGCSPDE 349
+ F + +M + G +PD+
Sbjct: 627 SKEAFQLHDEMLQRGFAPDD 646
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 174/356 (48%), Gaps = 17/356 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N +I +L K S L ++ PN TF I + ++EA
Sbjct: 218 TFNKLIHVLCKKGNVQESEKLFSKVMKR-GVCPNLFTFNIFIQGLCRKGAIDEAARLLES 276
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ GL D +SY L+ C++ ++EA+ C+ +K V SG VE N+ YN I+ G
Sbjct: 277 IVSEGLTPDVISYNTLICGFCKHSKLVEAE--CY-LHKMVN-SG-VEPNEF-TYNTIING 330
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K + + +G + D +YS ++ +C G +A+ ++ E +KG K
Sbjct: 331 FCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHS 390
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
++ YNT+++ + V A+++ ++M E GC P + T N V+ LC+ G + +A +L
Sbjct: 391 IILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILN 450
Query: 272 EMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ KGC+PD+ T+ +C R ++K EIL D M+ GI P + TY LL
Sbjct: 451 DAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEIL---DTMLSHGITPDVITYNTLLNGLC 507
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ L V +K M E GC+P+ YN L+++ + A + +EM +GL+
Sbjct: 508 KARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT 563
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 183/442 (41%), Gaps = 70/442 (15%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
Y ND AL+ FN V+T+ F HT +TY +I+ LG +F+ +++ M+ N S
Sbjct: 16 YQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKML 75
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEY----------- 114
+ + + Y V EA+ F ++D + + V SY +++ L EY
Sbjct: 76 EGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYM 135
Query: 115 ------------KHVIEAQELCFGENKNVGFSGL-------VEMNKTKIYNMILRGWFKM 155
H I + C L E N Y ++ G++K
Sbjct: 136 RMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVS-YCAVISGFYKE 194
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
+ + ++EM K+G+ D+ +++ + ++CK G ++ KL+ ++ K+G+ ++ +
Sbjct: 195 NCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTF 254
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
N I+ + +D A R+ + G P V++ NT+I C++ ++ EA L +M
Sbjct: 255 NIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVN 314
Query: 276 KGCVPDVITYH------CFFRCLEKPREIL------------------------------ 299
G P+ TY+ C ++ +IL
Sbjct: 315 SGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNR 374
Query: 300 --GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+F +E G + + Y L++ + G + + K M E GCSPD + YN +V+
Sbjct: 375 AMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVN 434
Query: 358 ALIDKGMLDMARKYDEEMFAKG 379
L G L A + AKG
Sbjct: 435 GLCKMGCLSDANGILNDAIAKG 456
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 166/382 (43%), Gaps = 36/382 (9%)
Query: 20 WVETDCHFTHTTD--------TYNSVIDILGKFFEFDLSWNLIHRMKDN--PSSIPNHAT 69
VE +C+ + TYN++I+ F + + N ++D IP+ T
Sbjct: 302 LVEAECYLHKMVNSGVEPNEFTYNTIIN---GFCKAGMMQNADKILRDAMFKGFIPDEFT 358
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGEN 128
+ + +N AM F + E G K + Y LV L + V++A +L
Sbjct: 359 YSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQL----- 413
Query: 129 KNVGFSGLVEMNKTK---IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
++E + YN+++ G KM + +G + D+ +++ +D
Sbjct: 414 ----MKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLID 469
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
CK KA+++ M GI DV+ YNT++ + + +D + ++ M E GC P
Sbjct: 470 GYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTP 529
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC-------LEKPREI 298
+++T N +I+ C++ +V EA + EM +G PD++T C C L+K E+
Sbjct: 530 NIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTL-CTLICGLCSNGELDKAYEL 588
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
++ E + +++ F + ++ KM C+PD + Y ++D+
Sbjct: 589 FVTIEK--EYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDS 646
Query: 359 LIDKGMLDMARKYDEEMFAKGL 380
G +D+A + E +KGL
Sbjct: 647 YCKTGNIDLAHTFLLENISKGL 668
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 142/351 (40%), Gaps = 54/351 (15%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C D RA+ F + + F H+ YN+++ L K + L+ M ++ S P
Sbjct: 367 CNDGDMNRAMAVF-YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCS-P 424
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ ++ +++A G N G + D ++ L+D C+ +++ +A E+
Sbjct: 425 DIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEI- 483
Query: 125 FGENKNVGFSGLVEMNKTK---IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
++ T YN +L G K + ++ M ++G ++ +Y+
Sbjct: 484 --------LDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYN 535
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVA--------------------------- 214
I ++ CK K +A++L+KEMK +G+ D+V
Sbjct: 536 ILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKE 595
Query: 215 ---------YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+N +I A V A +++ +M C P T +I C+ G +
Sbjct: 596 YKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDL 655
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPK 313
A+ L E KG VP T CL + E + + + M+++GI P+
Sbjct: 656 AHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 108/280 (38%), Gaps = 43/280 (15%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + +A+E + + + T TYN++++ L K + D + M + + P
Sbjct: 472 CKQRNMDKAIEILDTMLSH-GITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCT-P 529
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N T+ I+ + + V+EAM F ++ GL D V+ C L+ LC + +A EL
Sbjct: 530 NIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELF 589
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
K FS T I+N+++ + + + +M D ++Y + +
Sbjct: 590 VTIEKEYKFS-----YSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMI 644
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D CK+G +D A E G
Sbjct: 645 DSYCKTG-----------------------------------NIDLAHTFLLENISKGLV 669
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
PS TC V+ LC R+ EA ++ M + G VP+ +
Sbjct: 670 PSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEVN 709
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 193/414 (46%), Gaps = 50/414 (12%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVID-ILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
N +AL N ++ F +YN+++D ++ ++ + M ++ S PN
Sbjct: 146 NLINKALSIVNLAKS-YGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVS-PNV 203
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFG 126
T+ I+ + + TA + + F +++ G L + V+Y ++DA C+ + + EA +L
Sbjct: 204 YTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKL--- 260
Query: 127 ENKNVGFSGLVEMNKTKI-YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
+ L +N I YN+++ G + + E EEM KR V D +++ ++
Sbjct: 261 ----LRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLIN 316
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI----RAVGVSEGVDF----------- 230
C G +A+ L+ EM K G+ +VV Y T+I +A ++ ++F
Sbjct: 317 GYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHP 376
Query: 231 --------------------AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
A ++ +EM E G P+++T N +I C GR+ +A +L
Sbjct: 377 NGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLL 436
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPREILGLFD---RMIESGIRPKMDTYVMLLRKFGRW 327
EM ++G +PDV++Y + +E+ F M+ GI P + TY L++ +
Sbjct: 437 QEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQ 496
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
L V ++++M LG PDE Y +L++A +G LD A + +EM KG S
Sbjct: 497 RRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFS 550
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 160/368 (43%), Gaps = 26/368 (7%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N++I+ F + L M N S PN T+ + A +N AM ++
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVKNGLS-PNVVTYTTLINSMCKAGNLNRAMEFLDQ 368
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + GL + +Y L+D + + +A ++ E GF+ + YN ++ G
Sbjct: 369 MRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQI-MKEMVENGFTPTI-----ITYNALING 422
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ +EM +RG + D+ SYS + C++ + KA +L EM KGI D
Sbjct: 423 HCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPD 482
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V Y+++I+ + + +++EM +G P VT ++I C G + +A +
Sbjct: 483 VATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHD 542
Query: 272 EMPKKGCVPDVITYHCFF-------RCLEKPREILGL-----------FDRMIESGIRPK 313
EM +KG PD++TY+ R E R +L L ++ +I++ +
Sbjct: 543 EMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLE 602
Query: 314 MDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDE 373
+ + L++ F G + V + M + G +E YN ++ G ++ A +
Sbjct: 603 FKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYK 662
Query: 374 EMFAKGLS 381
EM G +
Sbjct: 663 EMLHSGFA 670
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 108/254 (42%), Gaps = 23/254 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+Y+++I + E + ++ L M S P+ AT+ + + + E F +
Sbjct: 450 SYSTIISGFCRNQELEKAFQLKVEMVAKGIS-PDVATYSSLIQGLCKQRRLGEVCDLFQE 508
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ GL DEV+Y +L++A C + +A L E GFS + YN+++ G
Sbjct: 509 MLSLGLPPDEVTYTSLINAYCIEGDLDKALRL-HDEMIQKGFSPDI-----VTYNVLING 562
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD------------IM---CKSGKPWKA 196
+ K S + + ++ V + +Y+ +D +M C G +A
Sbjct: 563 FNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEA 622
Query: 197 VKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKL 256
++ + M +KG K++ YN +I ++ A +Y+EM G P VT + K
Sbjct: 623 DRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKS 682
Query: 257 LCENGRVREAYAVL 270
L G+ E +L
Sbjct: 683 LYHEGKEVELNQLL 696
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 177/394 (44%), Gaps = 14/394 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C K+A +F +E + TYN+VI + + ++ MK N P
Sbjct: 247 CKEGKLKKAKDFIGSME-NLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMK-NRGVEP 304
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ + + EA G K+ E GL V+Y L+D C +++A
Sbjct: 305 DSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKA---- 360
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
FG + ++ T YN+++ F + ++M G+V D +Y+I +
Sbjct: 361 FGYRDEMVRRAILPTVST--YNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILI 418
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ C+ G KA L+ EM KGI+ +V Y ++I + + A ++ ++ G
Sbjct: 419 NGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGAS 478
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF--RCLE-KPREILGL 301
P ++ N +I C NG + A+A+L EM K+ VPD +TY+ RC E K E L
Sbjct: 479 PDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEAREL 538
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
M GIRP +Y L+ + + G + F + +M +G +P YNAL+ L
Sbjct: 539 LKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCK 598
Query: 362 KGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
D+A + +EM +KG++ P + L++G
Sbjct: 599 NQQGDLAEELLKEMVSKGIT--PDDSTYFSLIEG 630
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 134/290 (46%), Gaps = 9/290 (3%)
Query: 94 DEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWF 153
D G K + + L+ A CE K +A E CF K G + K + +N +L +
Sbjct: 159 DRLGTKSSIVFDMLIRACCELKRGDDAFE-CFDMMKEKGV-----VPKIETFNAMLSLFL 212
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
K++ + EM + + +++++I ++++CK GK KA M+ G+K +VV
Sbjct: 213 KLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVV 272
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
YNTVI V+ A V M+ G +P T ++I +C+ G++ EA +L +M
Sbjct: 273 TYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKM 332
Query: 274 PKKGCVPDVITYHCFFRCLEKPREILGLF---DRMIESGIRPKMDTYVMLLRKFGRWGFL 330
+ G +P +TY+ +++ F D M+ I P + TY +L+ G +
Sbjct: 333 KEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKM 392
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ K M + G PD YN L++ G A +EM +KG+
Sbjct: 393 DEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGI 442
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 86/205 (41%), Gaps = 28/205 (13%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVN----E 85
T TY S+I +L K + +L ++ +S P+ IMF + H N
Sbjct: 445 TLVTYTSLIYVLSKRNRMKAADDLFEKIIREGAS-PD----LIMFNALIDGHCANGNLDR 499
Query: 86 AMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI 144
A ++D+ + DEV+Y L+ C V EA+EL L EM + I
Sbjct: 500 AFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEAREL------------LKEMKRRGI 547
Query: 145 ------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK 198
YN ++ G+ K +EM G L +Y+ + +CK+ + A +
Sbjct: 548 RPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEE 607
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVG 223
L KEM KGI D Y ++I +G
Sbjct: 608 LLKEMVSKGITPDDSTYFSLIEGIG 632
>gi|2827705|emb|CAA16678.1| predicted protein [Arabidopsis thaliana]
Length = 598
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 178/365 (48%), Gaps = 30/365 (8%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSIPNHATFRIMFK 75
FF W + H+ + Y S++ IL K +F W LI M K+NP I F ++ +
Sbjct: 126 FFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPE-LFVVLVQ 184
Query: 76 RYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFS 134
R+ +A +V +A+ +++ +FG + DE + L+DALC++ V +A +L VG
Sbjct: 185 RFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRVG-- 242
Query: 135 GLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPW 194
+M + K Y ++ +M++ G D+ Y+ + +GK
Sbjct: 243 ---KMMEAK-YVLV------------------QMNEAGFEPDIVDYTNLLSGYANAGKMA 280
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
A L ++M+++G + + Y +I+A+ + ++ AM+V+ EM C+ VVT ++
Sbjct: 281 DAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALV 340
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIR 311
C+ G++ + Y VL +M KKG +P +TY EK E L L ++M +
Sbjct: 341 SGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYH 400
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
P + Y +++R + G ++ +W +MEE G SP + +++ L +G L A +
Sbjct: 401 PDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDH 460
Query: 372 DEEMF 376
+EM
Sbjct: 461 FKEML 465
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 103/242 (42%), Gaps = 20/242 (8%)
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK------------- 206
K E +EM K G D + + +D +CK G A KL+++M+ +
Sbjct: 194 KAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRVGKMMEAKYVLVQ 253
Query: 207 ----GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
G + D+V Y ++ + + A + R+MR G +P+ +I+ LC+ R
Sbjct: 254 MNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDR 313
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVM 319
+ EA V EM + C DV+TY K +I + D MI+ G+ P TY+
Sbjct: 314 MEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMH 373
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++ + + +KM ++ PD YN ++ G + A + EM G
Sbjct: 374 IMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENG 433
Query: 380 LS 381
LS
Sbjct: 434 LS 435
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 109/262 (41%), Gaps = 32/262 (12%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PN + ++ + + EAM F +++ + + D V+Y LV C++ + +
Sbjct: 296 PNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKI----DK 351
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
C+ ++ GL+ T Y I+ K + +C E E+M + D+ Y++
Sbjct: 352 CYIVLDDMIKKGLMPSELT--YMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVV 409
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM-- 241
+ + CK G+ +AV+L+ EM++ G+ V + +I + + A ++EM +
Sbjct: 410 IRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMLLLNT 469
Query: 242 ---------------------GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVP 280
C+ +V++ I L G +EA + EM + +P
Sbjct: 470 VLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMP 529
Query: 281 DVITYHCFFRCLEK--PREILG 300
T+ + L+K RE G
Sbjct: 530 QPDTFAKLMKGLKKLYNREFAG 551
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 174/356 (48%), Gaps = 17/356 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N +I +L K S L ++ PN TF I + ++EA
Sbjct: 218 TFNKLIHVLCKKGNVQESEKLFSKVMKR-GVCPNLFTFNIFIQGLCRKGAIDEAARLLES 276
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ GL D +SY L+ C++ ++EA+ C+ +K V SG VE N+ YN I+ G
Sbjct: 277 IVSEGLTPDVISYNTLICGFCKHSKLVEAE--CY-LHKMVN-SG-VEPNEFT-YNTIING 330
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K + + +G + D +YS ++ +C G +A+ ++ E +KG K
Sbjct: 331 FCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHS 390
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
++ YNT+++ + V A+++ ++M E GC P + T N V+ LC+ G + +A +L
Sbjct: 391 IILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILN 450
Query: 272 EMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ KGC+PD+ T+ +C R ++K EIL D M+ GI P + TY LL
Sbjct: 451 DAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEIL---DTMLSHGITPDVITYNTLLNGLC 507
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ L V +K M E GC+P+ YN L+++ + A + +EM +GL+
Sbjct: 508 KARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT 563
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 181/442 (40%), Gaps = 70/442 (15%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
Y ND AL+ FN V+T+ F HT +TY +I+ LG +F+ +++ M+ N S
Sbjct: 16 YQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKML 75
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEY----------- 114
+ + + Y V EA+ F ++D + + V SY +++ L EY
Sbjct: 76 EGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYM 135
Query: 115 ------------KHVIEAQELCFGENKNVGFSGL-------VEMNKTKIYNMILRGWFKM 155
H I + C L E N Y ++ G++K
Sbjct: 136 RMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVS-YCAVISGFYKE 194
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
+ + ++EM K+G+ D+ +++ + ++CK G ++ KL+ ++ K+G+ ++ +
Sbjct: 195 NCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTF 254
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
N I+ + +D A R+ + G P V++ NT+I C++ ++ EA L +M
Sbjct: 255 NIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVN 314
Query: 276 KGCVPDVITYHCFFRCLEK--------------------PREI----------------- 298
G P+ TY+ K P E
Sbjct: 315 SGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNR 374
Query: 299 -LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ +F +E G + + Y L++ + G + + K M E GCSPD + YN +V+
Sbjct: 375 AMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVN 434
Query: 358 ALIDKGMLDMARKYDEEMFAKG 379
L G L A + AKG
Sbjct: 435 GLCKMGCLSDANGILNDAIAKG 456
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 166/382 (43%), Gaps = 36/382 (9%)
Query: 20 WVETDCHFTHTTD--------TYNSVIDILGKFFEFDLSWNLIHRMKDN--PSSIPNHAT 69
VE +C+ + TYN++I+ F + + N ++D IP+ T
Sbjct: 302 LVEAECYLHKMVNSGVEPNEFTYNTIIN---GFCKAGMMQNADKILRDAMFKGFIPDEFT 358
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGEN 128
+ + +N AM F + E G K + Y LV L + V++A +L
Sbjct: 359 YSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQL----- 413
Query: 129 KNVGFSGLVEMNKTK---IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
++E + YN+++ G KM + +G + D+ +++ +D
Sbjct: 414 ----MKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLID 469
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
CK KA+++ M GI DV+ YNT++ + + +D + ++ M E GC P
Sbjct: 470 GYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTP 529
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC-------LEKPREI 298
+++T N +I+ C++ +V EA + EM +G PD++T C C L+K E+
Sbjct: 530 NIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTL-CTLICGLCSNGELDKAYEL 588
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
++ E + +++ F + ++ KM C+PD + Y ++D+
Sbjct: 589 FVTIEK--EYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDS 646
Query: 359 LIDKGMLDMARKYDEEMFAKGL 380
G +D+A + E +KGL
Sbjct: 647 YCKTGNIDLAHTFLLENISKGL 668
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 142/348 (40%), Gaps = 48/348 (13%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C D RA+ F + + F H+ YN+++ L K + L+ M ++ S P
Sbjct: 367 CNDGDMNRAMAVF-YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCS-P 424
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ ++ +++A G N G + D ++ L+D C+ +++ +A E+
Sbjct: 425 DIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEIL 484
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+ G+ YN +L G K + ++ M ++G ++ +Y+I +
Sbjct: 485 ----DTMLSHGITP--DVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILI 538
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVA------------------------------ 214
+ CK K +A++L+KEMK +G+ D+V
Sbjct: 539 ESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKF 598
Query: 215 ------YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+N +I A V A +++ +M C P T +I C+ G + A+
Sbjct: 599 SYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHT 658
Query: 269 VLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPK 313
L E KG VP T CL + E + + + M+++GI P+
Sbjct: 659 FLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 168/357 (47%), Gaps = 22/357 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM---FKRYVTAHLVNEAMGT 89
TYNS+++ L K D + LI +P+ I + +R +A + E M
Sbjct: 192 TYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKM-V 250
Query: 90 FNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
N G K D VSY L+ L + V EA +L FG G+ + YN++
Sbjct: 251 LN-----GCKPDIVSYNALIHGLAREQGVSEALKL-FGSVLRQGYE-----PEVPTYNIL 299
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G K + E + + K G+ D +Y++++D +CK+G+ A+ + K+M +KG
Sbjct: 300 IDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGC 359
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
DVV++N VI + + VD A + M GC P+ ++ NT+I C G+ ++A
Sbjct: 360 VPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMT 419
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPR------EILGLFDRMIESGIRPKMDTYVMLLR 322
EM K+G P V+TY+ L K R E + LFD MIE G P + TY L+
Sbjct: 420 TFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALID 479
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
G+ G L + ME GC P+ + YN+L+ L +D A + M KG
Sbjct: 480 GLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKG 536
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 154/316 (48%), Gaps = 17/316 (5%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
AL+ F V + TYN +ID L K + ++ L + + P+ T+ +
Sbjct: 277 ALKLFGSVLRQ-GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLE-PDAITYTVF 334
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFG-ENKNV 131
A V +A+ +DE G + D VS+ +++ LC+ K V EA+ L G E K
Sbjct: 335 IDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGC 394
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS- 190
+ + +N ++ G + W K ++EM KRGV + +Y+I +D +CK+
Sbjct: 395 SPNAIS-------FNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKAR 447
Query: 191 --GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
G+ +A+ L+ M +KG DVV Y+ +I +G + +D A R+ M GC P+V
Sbjct: 448 QEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVY 507
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRM 305
T N++I LC +V EA + M +KGCVPD ITY L K + L LFD
Sbjct: 508 TYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGS 567
Query: 306 IESGIRPKMDTYVMLL 321
+E+G+ P Y L+
Sbjct: 568 LEAGVVPTSGMYFSLI 583
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 140/303 (46%), Gaps = 19/303 (6%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELC 124
P+ T I+ + + + + +A +L GL D ++ + LC + +AQ +
Sbjct: 14 PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCRASRIGDAQTVF 73
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
G K+ GF YN +L G + +E M K G D+ +Y+ +
Sbjct: 74 DGMRKH-GF-----WPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLL 127
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
CK GK +A+K++ K+G DVV YN +I ++ +D A R+ + M
Sbjct: 128 HGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLV 187
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF-------FRCLEKPRE 297
P VVT N+++ LC+NGRV EA ++ + KG P+VITY R LE R+
Sbjct: 188 PDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRLESARQ 244
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+L ++M+ +G +P + +Y L+ R + ++ + G P+ YN L+D
Sbjct: 245 LL---EKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILID 301
Query: 358 ALI 360
L+
Sbjct: 302 GLL 304
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 146/313 (46%), Gaps = 13/313 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P T+ I+ + VNEA F+ L + GL+ D ++Y +D LC+ V +A +
Sbjct: 291 PEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLM 350
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
K++ G V +N ++ G K + M+ +G + S++
Sbjct: 351 L----KDMDEKGCVP--DVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTL 404
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV--GVSEG-VDFAMRVYREMRE 240
+ C++GK KA+ +KEM K+G+K VV YN ++ + EG + A+ ++ M E
Sbjct: 405 ICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIE 464
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--C-LEKPRE 297
G P VVT + +I L + G++ +A +L M KGC+P+V TY+ C L+K E
Sbjct: 465 KGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDE 524
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
L LF M+E G P TY ++ + + ++ E G P Y +L+D
Sbjct: 525 ALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLID 584
Query: 358 ALIDKGMLDMARK 370
L +D A K
Sbjct: 585 GLCAVARVDEALK 597
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 156/351 (44%), Gaps = 43/351 (12%)
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFG 126
+TF I A + +A F+ + + G + ++Y L+ LC + +AQ L +
Sbjct: 51 STFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQAL-YE 109
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
G+S YN +L G+ K+ + + ++ KRG V D+ +Y+ ++
Sbjct: 110 RMIKAGYS-----PDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALING 164
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI------------RAVGVSEGVDFAMRV 234
CK+ K +A ++ + M + + DVV YN+++ R + V +G +
Sbjct: 165 FCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVIT 224
Query: 235 Y--------REMREM-------------GCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
Y RE+R + GC+P +V+ N +I L V EA + +
Sbjct: 225 YSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSV 284
Query: 274 PKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
++G P+V TY+ L ++ E LF +++ G+ P TY + + + G +
Sbjct: 285 LRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRV 344
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
++ K M+E GC PD ++NA+++ L + +D A M AKG S
Sbjct: 345 EDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCS 395
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 167/376 (44%), Gaps = 17/376 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN+++ L + L RM S P+ T+ + + ++EA+ F+
Sbjct: 87 TYNALLSGLCNGGRMSDAQALYERMIKAGYS-PDVVTYNTLLHGFCKVGKLDEALKIFDG 145
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G + D V+Y L++ C+ + EAQ + + + LV T YN ++ G
Sbjct: 146 AVKRGFVPDVVTYNALINGFCKADKLDEAQRIL----QRMVSESLVPDVVT--YNSLVNG 199
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK-LYKEMKKKGIKM 210
K G+ E + +G ++ +YS + +C+ + ++ + L ++M G K
Sbjct: 200 LCK---NGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKP 256
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
D+V+YN +I + +GV A++++ + G +P V T N +I L + RV EA+ +
Sbjct: 257 DIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELF 316
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
+ + K G PD ITY F L K + L + M E G P + ++ ++ +
Sbjct: 317 SGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKE 376
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREE 387
+ V+ ME GCSP+ ++N L+ G A +EM +G+ KP
Sbjct: 377 KRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGV--KPTVV 434
Query: 388 LGTKLVQGGLDGEQSG 403
LV G Q G
Sbjct: 435 TYNILVDGLCKARQEG 450
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 4/197 (2%)
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
D ++ I + + KSGK KA + +++ KG+ D+ +N I + + + A V+
Sbjct: 15 DAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQTVF 73
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCL 292
MR+ G P+ +T N ++ LC GR+ +A A+ M K G PDV+TY+ F +
Sbjct: 74 DGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKV 133
Query: 293 EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
K E L +FD ++ G P + TY L+ F + L + ++M PD Y
Sbjct: 134 GKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTY 193
Query: 353 NALVDALIDKGMLDMAR 369
N+LV+ L G +D AR
Sbjct: 194 NSLVNGLCKNGRVDEAR 210
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 115/241 (47%), Gaps = 14/241 (5%)
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
++LR K K F E++ +G+ D+ +++IY+ +C++ + A ++ M+K
Sbjct: 20 GILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDAQTVFDGMRK 78
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G + + YN ++ + + A +Y M + G P VVT NT++ C+ G++ E
Sbjct: 79 HGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDE 138
Query: 266 AYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLR 322
A + K+G VPDV+TY+ F +K E + RM+ + P + TY L+
Sbjct: 139 ALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVN 198
Query: 323 ---KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI-DKGMLDMARKYDEEMFAK 378
K GR R + V + G SP+ Y+ L+ L + L+ AR+ E+M
Sbjct: 199 GLCKNGRVDEARMLIV------DKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLN 252
Query: 379 G 379
G
Sbjct: 253 G 253
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 114/245 (46%), Gaps = 17/245 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
++N+VI+ L K D + L+ M+ S PN +F + A +AM TF +
Sbjct: 365 SHNAVINGLCKEKRVDEAEVLLSGMEAKGCS-PNAISFNTLICGQCRAGKWKKAMTTFKE 423
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKH---VIEAQELCFGENKNVGFSGLVEMNKTK---IY 145
+ + G+K V +Y LVD LC+ + + EA L F ++E + Y
Sbjct: 424 MLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITL---------FDAMIEKGRVPDVVTY 474
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
+ ++ G K R M+ +G + ++++Y+ + +C K +A++L+ M +
Sbjct: 475 SALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVE 534
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
KG D + Y T+I A+ E VD A+ ++ E G P+ ++I LC RV E
Sbjct: 535 KGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDE 594
Query: 266 AYAVL 270
A +L
Sbjct: 595 ALKLL 599
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 171/360 (47%), Gaps = 29/360 (8%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
Y+++ID + K + +++L M S N T+ + + + +A+G FNK+
Sbjct: 213 YSTIIDSMCKDKNVNDAFDLYSEMVSRRIS-SNIVTYSALISGFCIVGKLKDAIGLFNKM 271
Query: 94 DEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI------YN 146
+ +V N LVDA C+ V EA+ +GL M K I YN
Sbjct: 272 TSENINPDVYTFNILVDAFCKEGRVKEAK------------NGLAMMMKQGIKPDIVTYN 319
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++ G+ ++ + M RGV + SY+I ++ CK +A+KL+KEM K
Sbjct: 320 SLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHK 379
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
I +V+ YN++I + S + +A+ + M + G QP ++T ++++ LC+N V +A
Sbjct: 380 QIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKA 439
Query: 267 YAVLAEMPKKGCVPDVITYHCFFR--C----LEKPREILGLFDRMIESGIRPKMDTYVML 320
A+L ++ +G P++ TY C LE R I F+ ++ G ++TY ++
Sbjct: 440 IALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNI---FEDLLVKGYNLTVNTYTVM 496
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
++ F G + KM++ C PD Y ++ +L DK D A K EM +GL
Sbjct: 497 IQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGL 556
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 136/322 (42%), Gaps = 16/322 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PN F I+ + L+ A K+ + G + D ++ + C + +A
Sbjct: 103 PNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNF 162
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+K V ++ Y ++ G K+ E +D + V D+ YS
Sbjct: 163 ---HDKLVALGFHLDQVS---YGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTI 216
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D MCK A LY EM + I ++V Y+ +I + + A+ ++ +M
Sbjct: 217 IDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENI 276
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPRE 297
P V T N ++ C+ GRV+EA LA M K+G PD++TY +C + +
Sbjct: 277 NPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKS 336
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
IL + M G+ + +Y +++ F + + ++K+M P+ YN+L+D
Sbjct: 337 IL---NTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLID 393
Query: 358 ALIDKGMLDMARKYDEEMFAKG 379
L G + A + + M +G
Sbjct: 394 GLCKSGRISYALELIDLMHDRG 415
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 114/245 (46%), Gaps = 3/245 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+N+++ + ++ ++ K G D + + ++ C G+ +A+ + ++
Sbjct: 108 FNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLV 167
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
G +D V+Y T+I + A+ + R + Q VV +T+I +C++ V
Sbjct: 168 ALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVN 227
Query: 265 EAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLL 321
+A+ + +EM + +++TY F + K ++ +GLF++M I P + T+ +L+
Sbjct: 228 DAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILV 287
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
F + G ++ M + G PD YN+L+D ++MA+ M +G++
Sbjct: 288 DAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVT 347
Query: 382 AKPRE 386
A R
Sbjct: 348 ATVRS 352
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 116/269 (43%), Gaps = 8/269 (2%)
Query: 133 FSGLVEMNKTKI---YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
F+ L+ N T + IL K + +++M+ RG+ + +++I ++ C+
Sbjct: 58 FNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQ 117
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
G A + ++ K G + D + NT I+ + + A+ + ++ +G V+
Sbjct: 118 LGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVS 177
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFD---RMI 306
T+I LC+ G R A +L + K DV+ Y + K + + FD M+
Sbjct: 178 YGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMV 237
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
I + TY L+ F G L+ ++ KM +PD + +N LVDA +G +
Sbjct: 238 SRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVK 297
Query: 367 MARKYDEEMFAKGLSAKPREELGTKLVQG 395
A+ M +G+ KP L+ G
Sbjct: 298 EAKNGLAMMMKQGI--KPDIVTYNSLMDG 324
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/375 (19%), Positives = 150/375 (40%), Gaps = 66/375 (17%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS++D E +++ ++++ M + ++ I+ + +V++AM F +
Sbjct: 317 TYNSLMDGYCLVNEVNMAKSILNTMSHRGVT-ATVRSYNIVINGFCKIKMVDQAMKLFKE 375
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELC-----FGENKNVGFSGLVEMNKTKIYN 146
+ + + ++Y +L+D LC+ + A EL G+ ++ Y+
Sbjct: 376 MHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDI-----------ITYS 424
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
IL K K ++ +G+ ++++Y+I +D +CK G+ A +++++ K
Sbjct: 425 SILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVK 484
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
G + V Y +I+ D A+ + +M++ C P +T +I L + +A
Sbjct: 485 GYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKA 544
Query: 267 YAVLAEMPKKGCVPDVITYHCF-FRCLEKPREILG------------------LFDR--- 304
+L EM +G + + Y + + P L L +R
Sbjct: 545 EKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSLQCTSSQESGNWAKLLLERIYC 604
Query: 305 ---MIESGIRPK-----------------------MDTYVMLLRKFGRWGFLRPVFVVWK 338
+ +S +R K ++TY ++++ F G +
Sbjct: 605 DCVLTKSNMRDKDVECPSVIIYSTCDWSKQGYILDVNTYTVMIQGFCSHGLFDESLALLS 664
Query: 339 KMEELGCSPDEFAYN 353
KME GC PD Y+
Sbjct: 665 KMEVNGCIPDAVTYD 679
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 112/242 (46%), Gaps = 8/242 (3%)
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
+M+LR F++S K F + + +HS+S + AV L+ + +
Sbjct: 7 SMLLRSVFRVSVPKKFHPF--QFPENTHFYFIHSFSTSTTFH-NNNDVVDAVSLFNCLLR 63
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+ + + ++ ++ S+ + ++++M G +P+ V N +I C+ G +
Sbjct: 64 QNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPF 123
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLR 322
A++VLA++ K G PD IT + F + CL+ + + L D+++ G +Y L+
Sbjct: 124 AFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLIN 183
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI-DKGMLDMARKYDEEMFAKGLS 381
+ G R + ++++ D Y+ ++D++ DK + D Y EM ++ +S
Sbjct: 184 GLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLY-SEMVSRRIS 242
Query: 382 AK 383
+
Sbjct: 243 SN 244
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 181/400 (45%), Gaps = 16/400 (4%)
Query: 5 SCYANDWKRALEFFNWVETDCHFTH----TTDTYNSVIDILGKFFEFDLSWNLIHRMKDN 60
+C + AL FN V + T TY+ ++D + DL L +
Sbjct: 127 ACITDGPALALALFNRVCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRT 186
Query: 61 PSSIPNHATFRIMFKRYVTAHLVNEAMGTF-NKLDEFGLKDEV-SYCNLVDALCEYKHVI 118
I + T + K A+ EA+ +++ E G V SY ++ LC+
Sbjct: 187 GLKI-HQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQ 245
Query: 119 EAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
A +L K G YN ++ G+FK GK + EM ++GV D+
Sbjct: 246 RALDLFQMMAKEGGACS----PNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVV 301
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+Y++ +D +CK+ KA + ++M G + D V YN +I + A +++R+M
Sbjct: 302 TYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKM 361
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP--- 295
+ G P++V CN+ + LC++GR +EA + M KG PD+++Y
Sbjct: 362 KSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWF 421
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
+++GLF+ M +GI + +L+ + + G + +++ +M++ G SPD Y+ +
Sbjct: 422 ADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTV 481
Query: 356 VDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+ A G L A + +M A+G+ +P + ++QG
Sbjct: 482 ISAFSRMGRLTDAMEKFNQMVARGI--QPNTAVYHSIIQG 519
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 161/355 (45%), Gaps = 16/355 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN +ID L K D + ++ +M N + P+ T+ M Y T + EA F K
Sbjct: 302 TYNLIIDALCKARAMDKAELVLRQMTTNGAQ-PDTVTYNCMIHGYATLGRLKEAAKMFRK 360
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI--YNMIL 149
+ GL + CN + +LC++ EA E+ F G +K I Y +L
Sbjct: 361 MKSRGLIPNIVICNSFLASLCKHGRSKEAAEI-FDSMTAKG-------HKPDIVSYCTLL 412
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G+ W+ + M G+ D ++I + K G A+ ++ EM+++G+
Sbjct: 413 HGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVS 472
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
DVV Y+TVI A + AM + +M G QP+ +++I+ C +G + +A +
Sbjct: 473 PDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKEL 532
Query: 270 LAEMPKKGCV-PDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFG 325
++EM KG PD++ ++ L K ++ +FD + + G RP + T+ L+ +
Sbjct: 533 VSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYC 592
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G + F + ME +G D Y+ L+D G ++ EM KG+
Sbjct: 593 LVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGV 647
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 173/420 (41%), Gaps = 55/420 (13%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSI 64
CYAN + A+ ++ +Y+ ++ L + +L M K+ +
Sbjct: 203 CYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACS 262
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNL-VDALCEYKHVIEAQEL 123
PN + + + +A F+++ G+K +V NL +DALC+ + ++ EL
Sbjct: 263 PNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKAR-AMDKAEL 321
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ G T YN ++ G+ + + + + +M RG++ ++ + +
Sbjct: 322 VLRQMTTNG-----AQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSF 376
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG---------------- 227
+ +CK G+ +A +++ M KG K D+V+Y T++ SEG
Sbjct: 377 LASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYA-SEGWFADMIGLFNSMKSNG 435
Query: 228 --------------------VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
VD AM ++ EM++ G P VVT +TVI GR+ +A
Sbjct: 436 IAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAM 495
Query: 268 AVLAEMPKKGCVPDVITYH------CFFRCLEKPREILGLFDRMIESGI-RPKMDTYVML 320
+M +G P+ YH C L K +E L MI GI RP + + +
Sbjct: 496 EKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKE---LVSEMINKGIPRPDIVFFNSV 552
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + G + ++ + ++G PD + +L+D G +D A K + M G+
Sbjct: 553 INSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGV 612
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 149/333 (44%), Gaps = 12/333 (3%)
Query: 53 LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDAL 111
L + MK N + + F I+ Y +V++AM F ++ + G+ D V+Y ++ A
Sbjct: 427 LFNSMKSNGIA-ADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAF 485
Query: 112 CEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKR 171
+ +A E F + G T +Y+ I++G+ K +E EM +
Sbjct: 486 SRMGRLTDAMEK-FNQMVARGIQ-----PNTAVYHSIIQGFCMHGGLVKAKELVSEMINK 539
Query: 172 GVVK-DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF 230
G+ + D+ ++ ++ +CK G+ A ++ + G + DV+ + ++I + +D
Sbjct: 540 GIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDK 599
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR 290
A ++ M +G + +VT +T++ +NGR+ + + EM +KG P+ +TY
Sbjct: 600 AFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLA 659
Query: 291 CLEKPREILGL---FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
L + + F MIESG + Y ++L R ++++K+ +
Sbjct: 660 GLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKF 719
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
N +++A+ + A++ + A GL
Sbjct: 720 SITILNTMINAMYKVQRKEEAKELFATISASGL 752
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/388 (20%), Positives = 161/388 (41%), Gaps = 43/388 (11%)
Query: 19 NWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYV 78
N + DC +N +I K D + + M+ S P+ T+ + +
Sbjct: 434 NGIAADCR------VFNILIHAYAKRGMVDDAMLIFTEMQQQGVS-PDVVTYSTVISAFS 486
Query: 79 TAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNVG----- 132
+ +AM FN++ G++ + Y +++ C + +++A+EL E N G
Sbjct: 487 RMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKEL-VSEMINKGIPRPD 545
Query: 133 ---FSGLVE--------MNKTKIYNMI---------------LRGWFKMSWWGKCREFWE 166
F+ ++ M+ I++++ + G+ + K + +
Sbjct: 546 IVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILD 605
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
M+ GV D+ +YS +D K+G+ + L++EM++KG+K + V Y ++ + +
Sbjct: 606 AMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAG 665
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA---YAVLAEMPKKGCVPDVI 283
A + + EM E G +V ++ LC N EA + L M K + +
Sbjct: 666 RTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILN 725
Query: 284 TYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
T +++ E LF + SG+ P TY +++ + G + ++ ME+
Sbjct: 726 TMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKS 785
Query: 344 GCSPDEFAYNALVDALIDKGMLDMARKY 371
G P N ++ L++KG + A Y
Sbjct: 786 GIVPGSRLLNRIIRMLLEKGEIAKAGNY 813
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 193/414 (46%), Gaps = 50/414 (12%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVID-ILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
N +AL N ++ F +YN+++D ++ ++ + M ++ S PN
Sbjct: 146 NLINKALSIVNLAKS-YGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVS-PNV 203
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFG 126
T+ I+ + + TA + + F +++ G L + V+Y ++DA C+ + + EA +L
Sbjct: 204 YTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKL--- 260
Query: 127 ENKNVGFSGLVEMNKTKI-YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
+ L +N I YN+++ G + + E EEM KR V D +++ ++
Sbjct: 261 ----LRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLIN 316
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI----RAVGVSEGVDF----------- 230
C G +A+ L+ EM K G+ +VV Y T+I +A ++ ++F
Sbjct: 317 GYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHP 376
Query: 231 --------------------AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
A ++ +EM E G P+++T N +I C GR+ +A +L
Sbjct: 377 NGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLL 436
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPREILGLFD---RMIESGIRPKMDTYVMLLRKFGRW 327
EM ++G +PDV++Y + +E+ F M+ GI P + TY L++ +
Sbjct: 437 QEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQ 496
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
L V ++++M LG PDE Y +L++A +G LD A + +EM KG S
Sbjct: 497 RRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFS 550
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 160/368 (43%), Gaps = 26/368 (7%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N++I+ F + L M N S PN T+ + A +N AM ++
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVKNGLS-PNVVTYTTLINSMCKAGNLNRAMEFLDQ 368
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + GL + +Y L+D + + +A ++ E GF+ + YN ++ G
Sbjct: 369 MRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQI-MKEMVENGFTPTI-----ITYNALING 422
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ +EM +RG + D+ SYS + C++ + KA +L EM KGI D
Sbjct: 423 HCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPD 482
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V Y+++I+ + + +++EM +G P VT ++I C G + +A +
Sbjct: 483 VATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHD 542
Query: 272 EMPKKGCVPDVITYHCFF-------RCLEKPREILGL-----------FDRMIESGIRPK 313
EM +KG PD++TY+ R E R +L L ++ +I++ +
Sbjct: 543 EMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLE 602
Query: 314 MDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDE 373
+ + L++ F G + V + M + G +E YN ++ G ++ A +
Sbjct: 603 FKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYK 662
Query: 374 EMFAKGLS 381
EM G +
Sbjct: 663 EMLHSGFA 670
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 106/254 (41%), Gaps = 23/254 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+Y+++I + E + ++ L M S P+ AT+ + + + E F +
Sbjct: 450 SYSTIISGFCRNQELEKAFQLKVEMVAKGIS-PDVATYSSLIQGLCKQRRLGEVCDLFQE 508
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ GL DEV+Y +L++A C + +A L E GFS + YN+++ G
Sbjct: 509 MLSLGLPPDEVTYTSLINAYCIEGDLDKALRL-HDEMIQKGFSPDI-----VTYNVLING 562
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI---------------MCKSGKPWKA 196
+ K S + + ++ V + +Y+ +D C G +A
Sbjct: 563 FNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEA 622
Query: 197 VKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKL 256
++ + M +KG K++ YN +I ++ A +Y+EM G P VT + K
Sbjct: 623 DRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKS 682
Query: 257 LCENGRVREAYAVL 270
L G+ E +L
Sbjct: 683 LYHEGKEVELNQLL 696
>gi|242050034|ref|XP_002462761.1| hypothetical protein SORBIDRAFT_02g031520 [Sorghum bicolor]
gi|241926138|gb|EER99282.1| hypothetical protein SORBIDRAFT_02g031520 [Sorghum bicolor]
Length = 535
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 191/389 (49%), Gaps = 30/389 (7%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A FF + D Y S+ID+L K F L+ +L+ M++ I + F ++
Sbjct: 118 AAAFFRHIAASLPADSLPDLYASMIDLLAKHHHFSLARHLLDEMRERAVPISSRLIFALI 177
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFG--LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNV 131
+RYV A + +EA F +++E+G + + +L+ AL + + EAQ L F + V
Sbjct: 178 -RRYVRAEMPSEAADLFRRMEEYGSGAPEPATLASLLAALSKKRLASEAQAL-FDSCRTV 235
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
+V +Y ++ W + + + EM + G++ ++++Y+ +D M ++G
Sbjct: 236 FTPDVV------LYTAVVHAWCRAGQLDEAERVFAEMQQSGIMPNVYTYTAVIDAMYRAG 289
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRA---VGVSEGVDFAMRVYREMREMGCQPSVV 248
+ +A +L +M G + +N ++RA G SE V ++V+ +M ++ C+P ++
Sbjct: 290 QVPRAQELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQV---LQVHNQMHQLRCEPDII 346
Query: 249 TCNTVIKLLCENGR--VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG------ 300
T N +I+ C G+ + A VL +M K CVPD T++ FR L +LG
Sbjct: 347 TYNFLIETHCGKGQGNLDAALKVLDKMIAKKCVPDCHTFNPMFRLL----VVLGNIGAAH 402
Query: 301 -LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
L+++M E +P + TY LL+ F + + V + K M+ G P+ Y AL++A
Sbjct: 403 KLYEKMRELQCKPNVVTYNCLLKLFNKEKSMDMVLRMKKNMDVEGIEPNMHTYAALIEAF 462
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPREEL 388
+G A +EM + S KP +++
Sbjct: 463 CGRGNWKRAHATLKEMIEEK-SFKPSKQV 490
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 192/410 (46%), Gaps = 34/410 (8%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSW------NLIHRMKDNPS 62
+D + AL FFN++ +F H+T ++ +I L + +L W + NP
Sbjct: 81 DDSRLALRFFNFLGLHRNFHHSTASFCILIHSL---LQNNLFWPASSLLQTLLLRGLNPH 137
Query: 63 SI-------------PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLV 108
I + + F ++ + YV V + + N + ++GL EV + L+
Sbjct: 138 QIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALL 197
Query: 109 DALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM 168
+AL + + EL F N G IY ++++ ++ + K +E +
Sbjct: 198 NALARIRKFRQVLEL-FDTLVNAGVKP-----DCYIYTVVVKCLCELKDFNKAKEIINQA 251
Query: 169 DKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV 228
+ G + +Y+++++ +CKS + W+AV++ + + +KG+K D+V Y T++ + +
Sbjct: 252 EGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEF 311
Query: 229 DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
+ M + EM E+G PS + +I+ L + G + A+ +L ++ K G VP++ Y+
Sbjct: 312 EVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSM 371
Query: 289 FRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
L K E LF M E G+ P TY +L+ FGR L F + KM E G
Sbjct: 372 INSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGI 431
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
S ++YN++++ G + MA +EM KGL KP T L+ G
Sbjct: 432 SATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGL--KPTVATYTSLISG 479
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 172/388 (44%), Gaps = 38/388 (9%)
Query: 11 WKRALEFFNW-----VETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
+++ LE F+ V+ DC+ Y V+ L + +F+ + +I++ + N S+
Sbjct: 206 FRQVLELFDTLVNAGVKPDCYI------YTVVVKCLCELKDFNKAKEIINQAEGNGCSL- 258
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ + + V EA+ L E GLK D V+YC LV LC + E+
Sbjct: 259 SIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEM- 317
Query: 125 FGENKNVGF-------SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
E +G+ SGL+E G KM E ++ K GVV +L
Sbjct: 318 MDEMIELGYVPSEAAVSGLIE------------GLIKMGSIEGAFELLNKVGKLGVVPNL 365
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
Y+ ++ +CK+GK +A L+ M ++G+ + V Y +I G +D A + +
Sbjct: 366 FVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNK 425
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK--- 294
M E G +V + N++I C+ G+++ A + EM KG P V TY K
Sbjct: 426 MIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGL 485
Query: 295 -PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
P+ L+ M GI P T+ L+ + + ++ +M EL P+E YN
Sbjct: 486 VPKA-FKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYN 544
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGLS 381
L++ +G A + +EM KGLS
Sbjct: 545 VLIEGHCREGNTTRAFELLDEMIKKGLS 572
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 158/356 (44%), Gaps = 17/356 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +++ L + EF++ ++ M + +P+ A + + + + A NK
Sbjct: 297 TYCTLVLGLCRIQEFEVGMEMMDEMIE-LGYVPSEAAVSGLIEGLIKMGSIEGAFELLNK 355
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVE--MNKTKI-YNMI 148
+ + G+ + Y +++++LC+ + EA+ L FS + E +N + Y ++
Sbjct: 356 VGKLGVVPNLFVYNSMINSLCKTGKLEEAELL---------FSVMAERGLNPNDVTYTIL 406
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G+ + + ++ +M + G+ ++SY+ ++ CK GK A L+KEM KG+
Sbjct: 407 IDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGL 466
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
K V Y ++I V A ++Y EM G P+ VT +I LC+ ++ EA
Sbjct: 467 KPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASK 526
Query: 269 VLAEMPKKGCVPDVITYHCFF--RCLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ EM + +P+ +TY+ C E L D MI+ G+ P TY L+
Sbjct: 527 LFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLC 586
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G + + DE Y AL+ +G + A +EM +GL
Sbjct: 587 STGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQ 642
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 151/362 (41%), Gaps = 52/362 (14%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A +FN + +C + T +YNS+I+ KF + ++ L M D P AT+ +
Sbjct: 419 AFYYFNKM-IECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLK-PTVATYTSL 476
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
Y LV +A ++++ G+ + V++ L+ LC+ + EA +L
Sbjct: 477 ISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKL--------- 527
Query: 133 FSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
F +VE+ YN+++ G + + E +EM K+G+ D ++Y + +C
Sbjct: 528 FDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCS 587
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
+G+ +A + ++ K ++D + Y +++
Sbjct: 588 TGRVSEAKEFINDLHHKHQRLDELCYTALLQG---------------------------- 619
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL--EKPREILGLFDRMIE 307
C+ GR++EA EM +G D+++Y + R + L M
Sbjct: 620 -------FCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHG 672
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
G++P Y +L+ F + G L+ F W M G P+ Y ALV+ L G ++
Sbjct: 673 KGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNE 732
Query: 368 AR 369
A+
Sbjct: 733 AK 734
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 100/204 (49%), Gaps = 8/204 (3%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNK-LDEFGLKDEVSYCNLVDALCEYKHVIEAQE 122
+PN T+ + A VNEA F + L + + ++Y +D L + ++ A +
Sbjct: 711 VPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQ 770
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L N G T YN+++RG+ ++ + + + + M G+V D +YS
Sbjct: 771 L-----HNAMLQG--SFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYST 823
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ CK G A+ +++ M ++G+K D V +N +I A ++ +D A+++ +M G
Sbjct: 824 FIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRG 883
Query: 243 CQPSVVTCNTVIKLLCENGRVREA 266
+P+ T ++++ L + R+ +
Sbjct: 884 LKPTQSTYHSLMVQLAQRARLTQV 907
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 174/385 (45%), Gaps = 25/385 (6%)
Query: 6 CYANDWKR------ALEFFNWV-ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMK 58
C N +KR AL+ F + E C T YN ++D L +F + L MK
Sbjct: 114 CIINGYKRVGSAEQALKMFYRIGEFGCK--PTVRIYNHLLDALLSENKFQMINPLYTNMK 171
Query: 59 DNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHV 117
+ IPN T+ I+ K V+ A F ++ G D V+Y +V +LC+ +
Sbjct: 172 KD-GLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKI 230
Query: 118 IEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
+A+EL +V +YN ++ G K + EM GV ++
Sbjct: 231 DDARELAGRFKPSV-----------PVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNV 279
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
SYS ++ +C SG A L+ +M +G ++ + +I+ + + A+ +++
Sbjct: 280 VSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKL 339
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
M + GC+P+VV NT+I LC NG + EA V +M + GC+P+V TY K +
Sbjct: 340 MIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGD 399
Query: 298 ILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
++G ++RMI G RP + TY ++ + + +KM GC+P+ +N
Sbjct: 400 LVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNT 459
Query: 355 LVDALIDKGMLDMARKYDEEMFAKG 379
+ L G ++ A K E M G
Sbjct: 460 FIKGLCGNGRVEWAMKLLERMQGHG 484
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 181/435 (41%), Gaps = 59/435 (13%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
+ L FF+ + F HT TY +I+ LG+ E D+ ++ +MK + +
Sbjct: 53 NLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLF 112
Query: 70 FRIM--FKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFG 126
I+ +KR +A +A+ F ++ EFG K V Y +L+DAL L
Sbjct: 113 ICIINGYKRVGSAE---QALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPL--- 166
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI---- 182
N+ GL+ YN++L+ K + + EM +G D +Y+
Sbjct: 167 -YTNMKKDGLIP--NVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSS 223
Query: 183 --------------------------YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
+D MCK G+ A+KL EM G+ +VV+Y+
Sbjct: 224 LCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYS 283
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
+I ++ VS V+ A ++ +M GC ++ T +IK G++ EA + M +
Sbjct: 284 CIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQD 343
Query: 277 GCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
GC P+V+ Y+ L E L + D+M SG P + TY +L+ F + G L
Sbjct: 344 GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGA 403
Query: 334 FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM--------------FAKG 379
W +M GC P+ Y +VD L M D A E+M F KG
Sbjct: 404 SETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKG 463
Query: 380 LSAKPREELGTKLVQ 394
L R E KL++
Sbjct: 464 LCGNGRVEWAMKLLE 478
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 156/354 (44%), Gaps = 13/354 (3%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F + YN++ID + K +++ L+ M DN PN ++ + + V A
Sbjct: 240 FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVD-PNVVSYSCIINSLCVSGNVELA 298
Query: 87 MGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
F ++ G + ++ L+ + EA +L + E N Y
Sbjct: 299 FALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDL-----WKLMIQDGCEPNVVA-Y 352
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N ++ G + + ++M + G + ++ +YSI +D KSG A + + M
Sbjct: 353 NTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMIS 412
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G + +VV Y ++ + + D A + +M GC P+ +T NT IK LC NGRV
Sbjct: 413 HGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEW 472
Query: 266 AYAVLAEMPKKGCVPDVITYH----CFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLL 321
A +L M GC+P++ TY+ FR + K E GLF + ++P + TY +L
Sbjct: 473 AMKLLERMQGHGCLPNITTYNELLDALFR-MNKYEEAFGLFQEIEARNLQPNLVTYNTVL 531
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
F R G + ++ K G +PD YN ++ A +G + +A + E +
Sbjct: 532 YGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERV 585
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 124/290 (42%), Gaps = 32/290 (11%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
YN++I L + + + +M+ + +PN T+ I+ + + + A T+N+
Sbjct: 351 AYNTLIHGLCSNGSLEEALQVCDQMQRS-GCLPNVTTYSILIDGFAKSGDLVGASETWNR 409
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL--------CFGEN-------KNVGFSGL 136
+ G + + V+Y +VD LC+ +A L C K + +G
Sbjct: 410 MISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGR 469
Query: 137 VE--------------MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
VE + YN +L F+M+ + + ++E++ R + +L +Y+
Sbjct: 470 VEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNT 529
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ ++G +A++L+ + +G D + YNT+I A V A ++ + M
Sbjct: 530 VLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMK 589
Query: 243 -CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC 291
P ++T ++I C + EA A L + +G P+ T++ RC
Sbjct: 590 EWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRC 639
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 179/370 (48%), Gaps = 17/370 (4%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+++ +AL F + + + H ++T+N+++ +L + FD +W + + +K + +
Sbjct: 101 HSHSTDQALTFLHHMIHEGHVP-LSNTFNNLMCLLIRSNYFDKAWWIFNELKSK--VVLD 157
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCF 125
+F IM K A + L+EFGL V Y L+D C+Y +V+ A+ L
Sbjct: 158 AYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFC 217
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
++ GLV T Y++++ G+FK + + +E M + G+V + ++Y+ +
Sbjct: 218 KMDR----LGLVPNPHT--YSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLIS 271
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF--AMRVYREMREMGC 243
C G KA K++ EM++KGI V+ YN +I G+ G F A+++ ++ ++G
Sbjct: 272 EYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIG--GLCRGKKFGEAVKLVHKVNKVGL 329
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFD 303
P++VT N +I C+ G++ A + ++ G P ++TY+ K + G D
Sbjct: 330 SPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALD 389
Query: 304 ---RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
M E I P TY +L+ F R + + ME+ G PD + Y+ L+ L
Sbjct: 390 LVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLC 449
Query: 361 DKGMLDMARK 370
G + A K
Sbjct: 450 VHGNMKEASK 459
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 160/347 (46%), Gaps = 23/347 (6%)
Query: 23 TDCHFTHT---TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVT 79
T HFT T Y+++++ D + +H M + +P TF + +
Sbjct: 78 TQAHFTPCLTYTPLYDTIVNAYVHSHSTDQALTFLHHM-IHEGHVPLSNTFNNLMCLLIR 136
Query: 80 AHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELC-----FGENKNVGFS 134
++ ++A FN+L + D S+ ++ CE + ++ L FG + NV
Sbjct: 137 SNYFDKAWWIFNELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNV--- 193
Query: 135 GLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPW 194
IY ++ G K + + +MD+ G+V + H+YS+ M+ K G
Sbjct: 194 --------VIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQR 245
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
+ ++Y+ MK+ GI + AYN +I VD A +V+ EMRE G V+T N +I
Sbjct: 246 EGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILI 305
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIR 311
LC + EA ++ ++ K G P+++TY+ F + K + LF+++ SG+
Sbjct: 306 GGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLS 365
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
P + TY L+ + + L + K+MEE +P + Y L+DA
Sbjct: 366 PTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDA 412
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 129/290 (44%), Gaps = 33/290 (11%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQE 122
+PN + + Y +V++A F ++ E G+ V +Y L+ LC K EA +
Sbjct: 260 VPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVK 319
Query: 123 LCFGENK----------NVGFSGLVEMNKTKI-------------------YNMILRGWF 153
L NK N+ +G ++ K YN ++ G+
Sbjct: 320 LVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYS 379
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
K+ + +EM++R + +Y+I +D + KA +++ M+K G+ DV
Sbjct: 380 KVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVY 439
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
Y+ +I + V + A ++++ + EM QP+ V NT+I C+ G A +L EM
Sbjct: 440 TYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEM 499
Query: 274 PKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVML 320
G VP+V ++ L EK +E L +MI SG++P + Y M+
Sbjct: 500 VHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 110/241 (45%), Gaps = 15/241 (6%)
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
+I +F +WW + E+ K VV D +S+ I + C++G K +L +++
Sbjct: 134 LIRSNYFDKAWW-----IFNEL-KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEF 187
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
G+ +VV Y T+I V A ++ +M +G P+ T + ++ + G RE
Sbjct: 188 GLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREG 247
Query: 267 YAVLAEMPKKGCVPDVITYHCFFR------CLEKPREILGLFDRMIESGIRPKMDTYVML 320
+ + M + G VP+ Y+C ++K ++ F M E GI + TY +L
Sbjct: 248 FQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKV---FAEMREKGIACGVMTYNIL 304
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ R + K+ ++G SP+ YN L++ D G +D A + ++ + GL
Sbjct: 305 IGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGL 364
Query: 381 S 381
S
Sbjct: 365 S 365
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 99/222 (44%), Gaps = 15/222 (6%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A+ FN +++ + T TYN++I K + +L+ M++ + P
Sbjct: 344 CDVGKMDTAVRLFNQLKSS-GLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIA-P 401
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELC 124
+ T+ I+ + + +A + +++ GL +V +Y L+ LC + ++ EA +L
Sbjct: 402 SKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKL- 460
Query: 125 FGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
F L EM+ + IYN ++ G+ K + EM G+V ++ S+
Sbjct: 461 --------FKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFC 512
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
+ ++C+ K +A L +M G+K V Y V + G
Sbjct: 513 STIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHKVKG 554
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 174/385 (45%), Gaps = 25/385 (6%)
Query: 6 CYANDWKR------ALEFFNWV-ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMK 58
C N +KR AL+ F + E C T YN ++D L +F + L MK
Sbjct: 114 CIINGYKRVGSAEQALKMFYRIGEFGCK--PTVRIYNHLLDALLSENKFQMINPLYTNMK 171
Query: 59 DNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHV 117
+ IPN T+ I+ K V+ A F ++ G D V+Y +V +LC+ +
Sbjct: 172 KD-GLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKI 230
Query: 118 IEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
+A+EL +V +YN ++ G K + EM GV ++
Sbjct: 231 DDARELAGRFKPSV-----------PVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNV 279
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
SYS ++ +C SG A L+ +M +G ++ + +I+ + + A+ +++
Sbjct: 280 VSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKL 339
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
M + GC+P+VV NT+I LC NG + EA V +M + GC+P+V TY K +
Sbjct: 340 MIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGD 399
Query: 298 ILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
++G ++RMI G RP + TY ++ + + +KM GC+P+ +N
Sbjct: 400 LVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNT 459
Query: 355 LVDALIDKGMLDMARKYDEEMFAKG 379
+ L G ++ A K E M G
Sbjct: 460 FIKGLCGNGRVEWAMKLLERMQGHG 484
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 181/435 (41%), Gaps = 59/435 (13%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
+ L FF+ + F HT TY +I+ LG+ E D+ ++ +MK + +
Sbjct: 53 NLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLF 112
Query: 70 FRIM--FKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFG 126
I+ +KR +A +A+ F ++ EFG K V Y +L+DAL L
Sbjct: 113 ICIINGYKRVGSAE---QALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPL--- 166
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI---- 182
N+ GL+ YN++L+ K + + EM +G D +Y+
Sbjct: 167 -YTNMKKDGLIP--NVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSS 223
Query: 183 --------------------------YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
+D MCK G+ A+KL EM G+ +VV+Y+
Sbjct: 224 LCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYS 283
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
+I ++ VS V+ A ++ +M GC ++ T +IK G++ EA + M +
Sbjct: 284 CIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQD 343
Query: 277 GCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
GC P+V+ Y+ L E L + D+M SG P + TY +L+ F + G L
Sbjct: 344 GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGA 403
Query: 334 FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM--------------FAKG 379
W +M GC P+ Y +VD L M D A E+M F KG
Sbjct: 404 SETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKG 463
Query: 380 LSAKPREELGTKLVQ 394
L R E KL++
Sbjct: 464 LCGNGRVEWAMKLLE 478
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 156/354 (44%), Gaps = 13/354 (3%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F + YN++ID + K +++ L+ M DN PN ++ + + V A
Sbjct: 240 FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVD-PNVVSYSCIINSLCVSGNVELA 298
Query: 87 MGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
F ++ G + ++ L+ + EA +L + E N Y
Sbjct: 299 FALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDL-----WKLMIQDGCEPNVVA-Y 352
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N ++ G + + ++M + G + ++ +YSI +D KSG A + + M
Sbjct: 353 NTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMIS 412
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G + +VV Y ++ + + D A + +M GC P+ +T NT IK LC NGRV
Sbjct: 413 HGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEW 472
Query: 266 AYAVLAEMPKKGCVPDVITYH----CFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLL 321
A +L M GC+P++ TY+ FR + K E GLF + ++P + TY +L
Sbjct: 473 AMKLLERMQGHGCLPNITTYNELLDALFR-MNKYEEAFGLFQEIEARNLQPNLVTYNTVL 531
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
F R G + ++ K G +PD YN ++ A +G + +A + E +
Sbjct: 532 YGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERV 585
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 124/290 (42%), Gaps = 32/290 (11%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
YN++I L + + + +M+ + +PN T+ I+ + + + A T+N+
Sbjct: 351 AYNTLIHGLCSNGSLEEALQVCDQMQRS-GCLPNVTTYSILIDGFAKSGDLVGASETWNR 409
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL--------CFGEN-------KNVGFSGL 136
+ G + + V+Y +VD LC+ +A L C K + +G
Sbjct: 410 MISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGR 469
Query: 137 VE--------------MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
VE + YN +L F+M+ + + ++E++ R + +L +Y+
Sbjct: 470 VEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNT 529
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ ++G +A++L+ + +G D + YNT+I A V A ++ + M
Sbjct: 530 VLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMK 589
Query: 243 -CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC 291
P ++T ++I C + EA A L + +G P+ T++ RC
Sbjct: 590 EWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRC 639
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 176/391 (45%), Gaps = 48/391 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++ID L K D + + +M D P+H T+ + A +++A G F +
Sbjct: 297 TYNTIIDGLCKAQAVDRAEGVFQQMIDRGVK-PDHVTYNTIIDGLCKAQAIDKAEGVFQQ 355
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + G+K D ++Y ++D LC+ + V A+ G + + G+ N T YN ++ G
Sbjct: 356 MIDKGVKPDNLTYTIIIDGLCKAQSVDRAE----GVFQQMIDKGVKPNNGT--YNCLIHG 409
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ W + + +EM + D+ +Y + +D +CK+GK +A L+ M +KGIK
Sbjct: 410 YLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPS 469
Query: 212 VVAY-----------------------------------NTVIRAVGVSEGVDFAMRVYR 236
V Y NTVI A +D M ++
Sbjct: 470 VTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFI 529
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---E 293
+M++ G P+VVT T+I LC+ GRV +A +M +G P+ + ++ L +
Sbjct: 530 KMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVD 589
Query: 294 KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
K ++ LF M+ GIRP + + +L + G + + M +G PD +YN
Sbjct: 590 KWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYN 649
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
L+D +D A K + M + GL KP
Sbjct: 650 TLIDGHCFASRMDEAVKLLDGMVSAGL--KP 678
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 173/370 (46%), Gaps = 19/370 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++ID L K E D + ++ +M + PN+ T+ + A V+ A G F K
Sbjct: 227 TYNTIIDGLCKAQEVDRAEDVFQQMVEKGVK-PNNVTYNTIIDGLCKAQEVDMAEGVFQK 285
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK---IYNMI 148
+ + G+K V+Y ++D LC+ + V A+ + F +++ YN I
Sbjct: 286 MVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGV---------FQQMIDRGVKPDHVTYNTI 336
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G K K +++M +GV D +Y+I +D +CK+ +A ++++M KG+
Sbjct: 337 IDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGV 396
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
K + YN +I + + ++ +EM +P V T ++ LC+NG+ EA +
Sbjct: 397 KPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARS 456
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ M +KG P V Y K E+ L + M+ +GI P + ++ +
Sbjct: 457 LFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYA 516
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
+ + V ++ KM++ G SP+ Y L+DAL G +D A +M +G++ P
Sbjct: 517 KRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVT--PN 574
Query: 386 EELGTKLVQG 395
+ LV G
Sbjct: 575 NVVFNSLVYG 584
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 166/353 (47%), Gaps = 14/353 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+YN VI+ + D +++L M +P + T+ + A V+ A F +
Sbjct: 195 SYNIVINGFFNEGQVDKAYSLFLEMGVSPDVV----TYNTIIDGLCKAQEVDRAEDVFQQ 250
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G+K + V+Y ++D LC+ + V A+ G + + G+ N T YN I+ G
Sbjct: 251 MVEKGVKPNNVTYNTIIDGLCKAQEVDMAE----GVFQKMVDKGVKPSNVT--YNTIIDG 304
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + +++M RGV D +Y+ +D +CK+ KA ++++M KG+K D
Sbjct: 305 LCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPD 364
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ Y +I + ++ VD A V+++M + G +P+ T N +I G+ E +
Sbjct: 365 NLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIK 424
Query: 272 EMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM PDV TY L K E LFD MI GI+P + Y ++L +G+ G
Sbjct: 425 EMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKG 484
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
L + + M G SP+ +N ++ A + M+D +M +GLS
Sbjct: 485 ALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLS 537
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 161/333 (48%), Gaps = 11/333 (3%)
Query: 52 NLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDA 110
+L++ M N S PNH F + Y +++E M F K+ + GL + V+Y L+DA
Sbjct: 491 DLLNLMVANGIS-PNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDA 549
Query: 111 LCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDK 170
LC+ V +A L F + N G + ++N ++ G + W K E + EM
Sbjct: 550 LCKLGRVDDAV-LQFNQMINEGVTP-----NNVVFNSLVYGLCTVDKWEKVEELFLEMLN 603
Query: 171 RGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF 230
+G+ D+ ++ + +CK G+ +A +L M G+K DV++YNT+I + +D
Sbjct: 604 QGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDE 663
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR 290
A+++ M G +P++V+ NT++ C+ GR+ AY + EM +KG P V TY+
Sbjct: 664 AVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILN 723
Query: 291 CLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
L + E L+ MI+S + TY ++L F + F +++ + +
Sbjct: 724 GLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQL 783
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
D +N ++D L G + A + A GL
Sbjct: 784 DIITFNIMIDGLFKGGRKEDAMDLFAAIPANGL 816
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 181/384 (47%), Gaps = 22/384 (5%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTD--TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
++ K A+ FN + DC D TY+ VI + +L + + +
Sbjct: 59 SSSSKLAVSRFNRMLRDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVD 118
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTF-NKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
+ +++ K V EAM ++ E G + VSY L+ LC+ + EA+EL
Sbjct: 119 DIVVNQLL-KGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEAREL 177
Query: 124 CF----GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
G++ + YN+++ G+F K + EM GV D+ +
Sbjct: 178 LHMMVDGQDSSCS-------PDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVT 227
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y+ +D +CK+ + +A ++++M +KG+K + V YNT+I + ++ VD A V+++M
Sbjct: 228 YNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMV 287
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI- 298
+ G +PS VT NT+I LC+ V A V +M +G PD +TY+ L K + I
Sbjct: 288 DKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAID 347
Query: 299 --LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
G+F +MI+ G++P TY +++ + + V+++M + G P+ YN L+
Sbjct: 348 KAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLI 407
Query: 357 DALIDKGMLDMARKYDEEMFAKGL 380
+ G + + +EM A L
Sbjct: 408 HGYLSTGQWEEVVQRIKEMSAHDL 431
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 118/267 (44%), Gaps = 12/267 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQEL 123
P+ ++ + + A ++EA+ + + GLK VSY L+ C+ + A L
Sbjct: 643 PDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCL 702
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F E G + VE YN IL G F+ + + RE + M K + + +YSI
Sbjct: 703 -FREMLRKGVTPGVE-----TYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSII 756
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D CK+ +A K+++ + +++D++ +N +I + + AM ++ + G
Sbjct: 757 LDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGL 816
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL----EKPREIL 299
PSVVT + + L E G + E + + M K G P+ + R L E PR
Sbjct: 817 VPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRA-G 875
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGR 326
++ E + T ML+ F R
Sbjct: 876 AYLSKLDEKNFSLEASTTSMLISLFSR 902
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 172/360 (47%), Gaps = 14/360 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNP--SSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
+YN+V+ L + D + L+ M P +S PN ++ + + +A+G
Sbjct: 58 SYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLL 117
Query: 91 NKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+ + G++ D V+Y L+ LC+ V A EL E G +E N +Y+ +L
Sbjct: 118 RSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVEL-LNEMCESG----IEPNVV-VYSCLL 171
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G+ K W + +EEM RG+ D+ Y+ +D +C+ GK KA ++ M ++G++
Sbjct: 172 HGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLE 231
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
+VV YN +I ++ V A+ + + M E G QP VVT NT+I L + EA A+
Sbjct: 232 PNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMAL 291
Query: 270 LAEMPK--KGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKF 324
L EM + PD++T++ L K R+ L + M E+G R + + +L+
Sbjct: 292 LEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGL 351
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
R ++ + +M G PD F Y+ L++ ++ A Y EM +G+ +P
Sbjct: 352 LRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEP 411
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 154/361 (42%), Gaps = 20/361 (5%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
Y ++ID L + + + ++ M + PN T+ ++ V EA+ +
Sbjct: 202 YTALIDSLCRHGKVKKAARVMDMMTERGLE-PNVVTYNVLINSMCKEGSVREALDLRKNM 260
Query: 94 DEFGLK-DEVSYCNLVDALCEYKHVIEA----QELCFGENKNVGFSGLVEMNKTKIYNMI 148
E G++ D V+Y L+ L + EA +E+ GE + +N +
Sbjct: 261 SEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETR--------VRPDLMTFNSV 312
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G K+ W + + M + G +L ++++ + + + K KA++L EM G+
Sbjct: 313 IHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGL 372
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ D Y+ +I V+ A EMR G +P V ++K +C+ G + +A
Sbjct: 373 QPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARD 432
Query: 269 VLAEMPKKGCVPDVITY----HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
+ EM + C D Y H F+ EK L D MI+ G+ P TY + + F
Sbjct: 433 LFNEM-DRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKD-MIDEGLIPDAVTYSIPINMF 490
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
+ G L V K+M G PD +++L+ KG + + EM AK ++ P
Sbjct: 491 AKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDP 550
Query: 385 R 385
+
Sbjct: 551 K 551
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIK------------MDVVAYNTVIRAV---GVSEG 227
Y+ ++ + G+ A +L + ++ + D V+YNTV+ A+ G +
Sbjct: 15 YLAVLLRRGRGEAAARLNRHLRLLPLPESPALLSALPSVRDAVSYNTVLAALCRQGCLDA 74
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
F +RV + +P+ ++ T+++ LC + R +A +L M G PDV+TY
Sbjct: 75 ALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGT 134
Query: 288 FFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
R L ++ + L + M ESGI P + Y LL + + G V V+++M G
Sbjct: 135 LIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRG 194
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
PD Y AL+D+L G + A + + M +GL
Sbjct: 195 IEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGL 230
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 183/395 (46%), Gaps = 18/395 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A D ALE +++ F T+ +I + + D + + + M +P
Sbjct: 1 CNAGDLHAALELLEEMKS-AGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDP---- 55
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELC 124
N T+ + + A + EAM ++ E G V+Y LVDALC+ V AQ++
Sbjct: 56 NVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDV- 114
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+ GF+ V +N ++ G+ K R+ M +G+ ++ +YS +
Sbjct: 115 VKKMIEGGFAPNV-----MTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALI 169
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D +CKS K +A ++ +EMK G+ D Y+ +I + ++ ++ A ++ R M GC
Sbjct: 170 DGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCT 229
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--C-LEKPREILGL 301
P VV +++I C++G++ EA L EM K+ PDV+TY+ C L K E +
Sbjct: 230 PDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVI 289
Query: 302 FDRMIESG-IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
D+M ESG + P + TY ++ + L + +M + GC+PD Y ++D L
Sbjct: 290 LDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLC 349
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
G L+ A + M G + P T L+ G
Sbjct: 350 KCGRLEEAEYLLQGMKRAGCA--PNVVTYTTLISG 382
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 181/380 (47%), Gaps = 39/380 (10%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN ++D L K + +++ +M + + PN TF + + V++A
Sbjct: 94 TYNVLVDALCKLSMVGAAQDVVKKMIEGGFA-PNVMTFNSLVDGFCKRGNVDDARKLLGI 152
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFS-----------GLVEMN 140
+ G++ + V+Y L+D LC+ + +EA+E+ E K G + GL + +
Sbjct: 153 MVAKGMRPNVVTYSALIDGLCKSQKFLEAKEV-LEEMKASGVTPDAFTYSALIHGLCKAD 211
Query: 141 KTK-------------------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
K + +Y+ I+ + K + ++ +EM K+ D+ +Y+
Sbjct: 212 KIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYN 271
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKG-IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+D +CK GK +A + +M++ G + DVV Y+TVI + S+ + A ++ M +
Sbjct: 272 TVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCK 331
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---E 297
GC P VVT T+I LC+ GR+ EA +L M + GC P+V+TY L K R E
Sbjct: 332 AGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDE 391
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE--LGCSPDEFAYNAL 355
+ + M +G P + TY ++ G ++ + ++M++ CSPD Y +
Sbjct: 392 AERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTI 451
Query: 356 VDALIDKGMLDMARKYDEEM 375
V+AL+ ++ A + E+M
Sbjct: 452 VNALMSSDLVQEAEQLLEQM 471
>gi|224107983|ref|XP_002314677.1| predicted protein [Populus trichocarpa]
gi|222863717|gb|EEF00848.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 182/388 (46%), Gaps = 12/388 (3%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+ L ++N W AL F W + + HT Y+ V+DILGK +F + W +++ M +
Sbjct: 70 QLLERFSNQWITALGVFIWAKNQTGYVHTPRLYDLVVDILGKCKKFGIMWKVVNEMNELN 129
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV-DALCEYKHVIEA 120
+ + +T I+ +R ++ + + + L+++ +K + N+V AL + +A
Sbjct: 130 GQV-SFSTMSIVVRRLASSGMYKDVIDVLRGLEKYRVKKDTVALNMVMHALAKQGGAKDA 188
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+ ++ + +N+++ G+ + R+ EEM+K G D SY
Sbjct: 189 YSVFLEFKDSITLD-------SHSFNILIHGYCEARMLDDARKTMEEMEKHGFRPDASSY 241
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ ++ CK + EM +KG + DV+AY+ IRA+G + ++ A+ VY +M +
Sbjct: 242 TCFIKAYCKQKDFRNVEVILNEMGEKGCEPDVIAYSIYIRALGKARKINEALEVYEKMNK 301
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC--FFRCLEKP-RE 297
C+P +T+I +L +GR+ +A+ V +M G D+ TY+ + C +
Sbjct: 302 NSCKPDAKFFSTLIYVLGRSGRLNDAWYVFEDMENHGVSRDLWTYNAMIYHACANRQGNS 361
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
L L +RM + +P ++TY LL+ + ++ + + M D Y L+
Sbjct: 362 ALKLLERMEVNSCKPDLETYQPLLKMCCKMKDMKVLKFLLSHMFNNNVRIDLSTYALLIR 421
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPR 385
L + G L+ A + ++ G+ K R
Sbjct: 422 ELAESGKLEHACFFFQDAVLNGIVPKDR 449
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 179/377 (47%), Gaps = 11/377 (2%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSV-IDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
+W+RAL+ + W+ H S+ I LG+ + +++ ++ +R + N
Sbjct: 176 GEWERALQGYEWMVQQGHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQKAGFG-NNV 234
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFG 126
+ M Y + EA+ F + + G K ++Y ++DA + ++ F
Sbjct: 235 YAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFE 294
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
E + G VE ++ +N ++ + S W + + EM +RG+ +D+ +Y+ +D
Sbjct: 295 EMQKEG----VEPDRI-TFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDA 349
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+CK G+ A + M+ K I +VV Y+T+I G + A+ +Y +M+E G +P
Sbjct: 350 VCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPD 409
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFD 303
V+ NT+I + + GR +A +M + G DV+TY+ K ++ GLFD
Sbjct: 410 RVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFD 469
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
+M G+ P + TY L+ + + G + ++ + + G PD Y++L+D+ G
Sbjct: 470 KMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCG 529
Query: 364 MLDMARKYDEEMFAKGL 380
+++ A +EM G+
Sbjct: 530 LVEDAVVLLQEMTQAGI 546
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 112/225 (49%), Gaps = 6/225 (2%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+ + K G ++++YS + +SG+ +A+K+++ MKK G K +++ YNT+I A
Sbjct: 220 DVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDAC 279
Query: 223 GVSEGVDF--AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVP 280
G GVD A+ ++ EM++ G +P +T N++I + ++ V AEM ++G
Sbjct: 280 G-KGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQ 338
Query: 281 DVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVW 337
D+ TY+ + K ++ + M I P + TY ++ +G+ G ++
Sbjct: 339 DIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLY 398
Query: 338 KKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
M+E G PD +YN L+D G D A ++M GL A
Sbjct: 399 HDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKA 443
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 145/338 (42%), Gaps = 55/338 (16%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++ID + K + +L+ +++ M+ S PN T+ M Y EA+G ++
Sbjct: 342 TYNTLIDAVCKGGQMELAASIMSSMRLKNIS-PNVVTYSTMIDGYGKLGCFEEAIGLYHD 400
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G++ D VSY L+D + +A C
Sbjct: 401 MKESGVRPDRVSYNTLIDIYAKLGRFDDALTAC--------------------------- 433
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
++M++ G+ D+ +Y+ +D K GK A L+ +MK +G+ +
Sbjct: 434 --------------KDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPN 479
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V+ Y+ +I A + A ++ E + G +P VV +++I C+ G V +A +L
Sbjct: 480 VLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQ 539
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREI-----------LGLFDRMIESGIRPKMDTYVML 320
EM + G P+++TY+ + ++ + +F+++ + T
Sbjct: 540 EMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEAAKGNMPINVFNKVGDRSTEIICKTLTSQ 599
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
G L V V+ +M++ G P+ ++A+++A
Sbjct: 600 QNANDHTGVLAAV-SVFHEMQQFGLKPNVVTFSAILNA 636
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 4/170 (2%)
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
+ +I +G V+ A+ V+ ++ G +V + ++ +GR REA V M K
Sbjct: 203 SIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKK 262
Query: 276 KGCVPDVITYHCFFRCLEKP----REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
GC P++ITY+ K ++ L +F+ M + G+ P T+ L+ R
Sbjct: 263 AGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWE 322
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
V+ +M+ G D F YN L+DA+ G +++A M K +S
Sbjct: 323 DSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNIS 372
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 174/381 (45%), Gaps = 12/381 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C WK+A +F +E TYN+VI+ +F+ + + MKD + P
Sbjct: 228 CREGKWKKAKDFIGHMEV-YGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDK-NLKP 285
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ R + EA G KL E GL + V+Y L+D C + +A
Sbjct: 286 DCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKA---- 341
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F + G+V T YN+++ F + + +EM ++GV D+ +Y+I +
Sbjct: 342 FAYRDEMMNRGIVASVFT--YNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQI 399
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ C+ G KA+ L+ EM +K I+ V Y ++I G + A +++ + G
Sbjct: 400 NGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGML 459
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGL 301
P ++ N +I C NG + A+ +L EM VPD +T++ + C E K E L
Sbjct: 460 PDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKL 519
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
D M E GI+P +Y L+ + + G ++ V+ +M LG P YNAL+
Sbjct: 520 LDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSK 579
Query: 362 KGMLDMARKYDEEMFAKGLSA 382
G D A + EM +KG++
Sbjct: 580 IGEADHAEELLREMQSKGITP 600
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 149/336 (44%), Gaps = 14/336 (4%)
Query: 61 PSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEA 120
PS P+ + + + NE N+L+ +K + + L+ A C+++ EA
Sbjct: 110 PSPKPSFHILQPILHTTTPTVIFNELSLARNRLN---VKTTLVFDLLLSAYCQFRKPDEA 166
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
E C K E + + ++ KM+W+ +EEM K + + ++
Sbjct: 167 LE-CLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWF-----VYEEMVKMNIKSSIVTF 220
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+I ++I+C+ GK KA M+ G+K +VV YNTVI + + A ++++ M++
Sbjct: 221 NIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKD 280
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR-CLEKP--RE 297
+P T N+ I LC+ R+ EA VL ++ + G VP+ +TY+ C K +
Sbjct: 281 KNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDK 340
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
D M+ GI + TY +L+ + + K+M E G PD YN ++
Sbjct: 341 AFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQIN 400
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLV 393
G A +EM K + +P E T L+
Sbjct: 401 GYCRCGNAKKALSLFDEMVEKNI--RPTVETYTSLI 434
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 121/254 (47%), Gaps = 8/254 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN +I L + + ++I M++ P+ T+ I Y +A+ F++
Sbjct: 359 TYNLLIHALFLEKRIEEAEDMIKEMREKGVE-PDVVTYNIQINGYCRCGNAKKALSLFDE 417
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E ++ V +Y +L+D + + EA+E F ++ G + M +N ++ G
Sbjct: 418 MVEKNIRPTVETYTSLIDVFGKRNRMSEAEEK-FKKSIKEGMLPDIIM-----FNALIDG 471
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + +EMD VV D +++ M C+ K +A KL EMK++GIK D
Sbjct: 472 HCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPD 531
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
++YNT+I + A+ V+ EM +G P+++T N +I+ + G A +L
Sbjct: 532 HISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLR 591
Query: 272 EMPKKGCVPDVITY 285
EM KG PD TY
Sbjct: 592 EMQSKGITPDDSTY 605
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 97/228 (42%), Gaps = 17/228 (7%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + K+AL F+ + + + T +TY S+ID+ GK + + +P
Sbjct: 403 CRCGNAKKALSLFDEM-VEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKK-SIKEGMLP 460
Query: 66 NHATFRIMFKRYVTAHLVNEAMG-TFNKLDEFG----LKDEVSYCNLVDALCEYKHVIEA 120
+ IMF + H VN + F L E + DEV++ L+ C + V EA
Sbjct: 461 D----IIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEA 516
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
++L E K G YN ++ G+ K E ++EM G L +Y
Sbjct: 517 KKL-LDEMKERGIKP-----DHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTY 570
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV 228
+ + K G+ A +L +EM+ KGI D Y VI A+ ++ +
Sbjct: 571 NALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDL 618
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 163/321 (50%), Gaps = 11/321 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P F + Y +N+A T K++ GL+ + V+Y +LV CE K++ EA++
Sbjct: 390 PVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEK- 448
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
C + G VE YN ++ G+ + + +C + EEM+K+G+ ++ SY
Sbjct: 449 CIKKMVEKGVLPNVE-----TYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCL 503
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
++ +CK +A + +M +G+ + YN +I ++ + A R + EM
Sbjct: 504 INCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREI 563
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILG 300
P++VT N +I LC+ G+V EA + +E+ +KG DVITY+ + ++ L
Sbjct: 564 VPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALE 623
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L++ M +SGI+P ++TY L+ G+ G + V ++++M ++ PD YNAL+ +
Sbjct: 624 LYETMKKSGIKPTLNTYHRLIAGCGKEGLVL-VEKIYQEMLQMNLVPDRVIYNALIHCYV 682
Query: 361 DKGMLDMARKYDEEMFAKGLS 381
+ G + A M A+G+
Sbjct: 683 EHGDVQKACSLHSAMEAQGIQ 703
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 178/393 (45%), Gaps = 50/393 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS++ + + + I +M + +PN T+ + Y + L + +
Sbjct: 429 TYNSLVKKFCEMKNMEEAEKCIKKMVEK-GVLPNVETYNTLIDGYGRSCLFDRCFQILEE 487
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+++ GLK V SY L++ LC+ +++EA E+ G+ + G + +IYNM++ G
Sbjct: 488 MEKKGLKPNVISYGCLINCLCKDANILEA-EVILGDMVHRGV-----VPNAQIYNMLIDG 541
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
F++EM R +V L +Y+I ++ +CK GK +A L E+ +KG+ D
Sbjct: 542 SCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFD 601
Query: 212 VVAYNTVIRAVGVS----------------------------------EGVDFAMRVYRE 237
V+ YN++I + EG+ ++Y+E
Sbjct: 602 VITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIYQE 661
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP-- 295
M +M P V N +I E+G V++A ++ + M +G PD +TY+C K
Sbjct: 662 MLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGR 721
Query: 296 -REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
++ L + M G+ PK +TY +L+ + +V +++M E G +P +
Sbjct: 722 MHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDN 781
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLSAKPREE 387
L+ L ++G R +D ++ ++ K +++
Sbjct: 782 LITGLREEG-----RSHDADVICSEMNMKGKDD 809
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 164/380 (43%), Gaps = 26/380 (6%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D KRA+E ++ + YN VI L K + L M D + PN T
Sbjct: 197 DLKRAIELMTCMKRG-GVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVA-PNRIT 254
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGEN 128
+ + Y + EA ++ ++ + ++ +L++ LC + + EAQ + E
Sbjct: 255 YNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRV-LEEM 313
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
+ GF + Y + G K EE ++GV ++ SI ++ +C
Sbjct: 314 EVYGF-----VPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALC 368
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
K G KA ++ K+ + G+ V +NT++ ++ A +M +G +P+ V
Sbjct: 369 KEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHV 428
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH---------CFF-RCLEKPREI 298
T N+++K CE + EA + +M +KG +P+V TY+ C F RC +
Sbjct: 429 TYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQ----- 483
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+ + M + G++P + +Y L+ + + V+ M G P+ YN L+D
Sbjct: 484 --ILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDG 541
Query: 359 LIDKGMLDMARKYDEEMFAK 378
G L A ++ +EM A+
Sbjct: 542 SCIAGKLKDAFRFFDEMVAR 561
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 151/341 (44%), Gaps = 22/341 (6%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+P+ A+ + + V+ + + F+++ E GL+ D+ Y + A + + A E
Sbjct: 144 LPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIE 203
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L + G+ +YN+++ G K + ++EM R V + +Y+
Sbjct: 204 LMTCMKRGGVSPGVF------VYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNT 257
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D CK G+ +A + + MK + ++ ++ +N+++ + ++ ++ A RV EM G
Sbjct: 258 LIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYG 317
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC--------LEK 294
P T T+ + G V + + E +KG ++ Y C +EK
Sbjct: 318 FVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGV--QILDYTCSILLNALCKEGNMEK 375
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
E+L F +E+G+ P + ++ + + G + + +KME +G P+ YN+
Sbjct: 376 AEEVLKKF---LENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNS 432
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
LV + ++ A K ++M KG+ P E L+ G
Sbjct: 433 LVKKFCEMKNMEEAEKCIKKMVEKGVL--PNVETYNTLIDG 471
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 120/276 (43%), Gaps = 14/276 (5%)
Query: 5 SCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
SC A K A FF+ + T TYN +I+ L K + + NL + S
Sbjct: 542 SCIAGKLKDAFRFFDEMVAR-EIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSF 600
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ + Y +A V +A+ + + + G+K ++ + + A C + ++ +++
Sbjct: 601 -DVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKI- 658
Query: 125 FGENKNVGFSGLVEMNKTK---IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
+ +++MN IYN ++ + + K M+ +G+ D +Y+
Sbjct: 659 --------YQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYN 710
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+ K G+ K L +MK +G+ Y+ +I + D A YREM E
Sbjct: 711 CLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFEN 770
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
G PSV C+ +I L E GR +A + +EM KG
Sbjct: 771 GFTPSVSICDNLITGLREEGRSHDADVICSEMNMKG 806
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 95/201 (47%), Gaps = 3/201 (1%)
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+ + I +S ++ +LY MKK G+ V + N + ++ ++ + ++++ E+ E
Sbjct: 117 MLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVES 176
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF--RCLEKP-REI 298
G +P I+ + G ++ A ++ M + G P V Y+ C EK ++
Sbjct: 177 GLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDA 236
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
LFD M++ + P TY L+ + + G L F + ++M+ P +N+L++
Sbjct: 237 EKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNG 296
Query: 359 LIDKGMLDMARKYDEEMFAKG 379
L M++ A++ EEM G
Sbjct: 297 LCRAQMMEEAQRVLEEMEVYG 317
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 160/320 (50%), Gaps = 10/320 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQEL 123
PN T+ + + A V+ A + E GLK V++ ++V+ +C+ + +A+++
Sbjct: 223 PNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKV 282
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F E G + YN ++ G+ K + + EM ++G++ D+ +++
Sbjct: 283 -FDEMVREGLA-----PDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSL 336
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ +MCK+G +AV L ++M+++G++M+ V + +I +D A+ R M++
Sbjct: 337 IHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRI 396
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFD 303
+PSVV N +I C GR+ EA +L EM KG PDV+TY K + F+
Sbjct: 397 KPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFE 456
Query: 304 ---RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+M+E G+ P TY L+R L V++K M +LG PDEF Y +L+D
Sbjct: 457 LNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHC 516
Query: 361 DKGMLDMARKYDEEMFAKGL 380
+G ++ A ++M G+
Sbjct: 517 KEGNVESALSLHDKMVKAGV 536
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 118/230 (51%), Gaps = 10/230 (4%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN +L S R F++ M GV ++++Y+I + +C G +A+ + ++M+
Sbjct: 159 YNAVLLALSDASLT-SARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMR 217
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
G +VV YNT++ A + VD A R+ MRE G +P++VT N+++ +C+ G++
Sbjct: 218 GAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKME 277
Query: 265 EAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPKMDTYV 318
+A V EM ++G PD ++Y +C C E L +F M + GI P + T+
Sbjct: 278 DARKVFDEMVREGLAPDGVSYNTLVGGYCKAGC---SHEALSVFAEMTQKGIMPDVVTFT 334
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
L+ + G L + ++M E G +E + AL+D KG LD A
Sbjct: 335 SLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDA 384
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/379 (20%), Positives = 163/379 (43%), Gaps = 50/379 (13%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL 123
P+ ++ + Y A +EA+ F ++ + G + D V++ +L+ +C+ ++ A L
Sbjct: 293 PDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTL 352
Query: 124 CFG------ENKNVGFSGLVE-----------------MNKTKI------YNMILRGWFK 154
+ V F+ L++ M + +I YN ++ G+
Sbjct: 353 VRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCM 412
Query: 155 MSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVA 214
+ + RE EM+ +G+ D+ +YS + CK+ A +L ++M +KG+ D +
Sbjct: 413 VGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAIT 472
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
Y+++IR + + + A +++ M ++G QP T ++I C+ G V A ++ +M
Sbjct: 473 YSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMV 532
Query: 275 KKGCVPDVITYHCFFRCLEK------------------PREILGLFDRMIESGIRPKMDT 316
K G +PDV+TY L K P +D ++ + ++ +
Sbjct: 533 KAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKS 592
Query: 317 YVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
+ LL+ F G + V++ M + + D Y+ L+ G + A + ++M
Sbjct: 593 VLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQML 652
Query: 377 AKGLSAKPREELGTKLVQG 395
G + P L++G
Sbjct: 653 QGGFA--PNSTSTISLIRG 669
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 4/173 (2%)
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
V+AYN V+ A+ + A R + M G P+V T N +++ LC G +EA ++L
Sbjct: 155 SVLAYNAVLLALS-DASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSIL 213
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRW 327
+M GC P+V+TY+ + E+ G L M E G++P + T+ ++ +
Sbjct: 214 RDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKA 273
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G + V+ +M G +PD +YN LV G A EM KG+
Sbjct: 274 GKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGI 326
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 83/407 (20%), Positives = 157/407 (38%), Gaps = 61/407 (14%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+ S+I ++ K + + L+ +M++ + N TF + + +++A+
Sbjct: 332 TFTSLIHVMCKAGNLERAVTLVRQMRERGLQM-NEVTFTALIDGFCKKGFLDDALLAVRG 390
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + +K V Y L++ C + EA+EL E + G V Y+ I+
Sbjct: 391 MKQCRIKPSVVCYNALINGYCMVGRMDEAREL-LHEMEAKGLKPDV-----VTYSTIISA 444
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K E ++M ++GV+ D +YS + ++C + A L+K M K G++ D
Sbjct: 445 YCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPD 504
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
Y ++I V+ A+ ++ +M + G P VVT + +I L ++ R EA +L
Sbjct: 505 EFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLF 564
Query: 272 EMPKKGCVPDVITYHCFFRCLEKP--REILGLF--------------------DR----- 304
++ + +P Y C K + +L L DR
Sbjct: 565 KLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLD 624
Query: 305 --------------------------MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWK 338
M++ G P + + L+R G + V +
Sbjct: 625 GSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQ 684
Query: 339 KMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
++ D A AL+D +++G +D M GL PR
Sbjct: 685 QLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPSPR 731
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 177/376 (47%), Gaps = 12/376 (3%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D RA E F+ + +C T+N ++ L K F L + PN T
Sbjct: 275 DNDRARELFDEM-LECCLCPDVTTFNKLVHALCKK-GFVLESERLFDKVLKRGVCPNLFT 332
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGEN 128
F I + ++ A+ + GL+ D V+Y ++ LC V+EA+E C +
Sbjct: 333 FNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEE-CLHKM 391
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
N GF E N YN I+ G+ K ++ +G D +Y ++ C
Sbjct: 392 VNGGF----EPNDF-TYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFC 446
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
+ G P +A+ ++K+ KG++ ++ YNT+I+ + + A+++ EM E GC+P +
Sbjct: 447 QDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIW 506
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRM 305
T N +I LC+ G + +A ++ + KGC+PD+ TY+ C + K + L +RM
Sbjct: 507 TYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRM 566
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
G+ P + TY LL + V ++K M E GC+P+ YN ++++L + +
Sbjct: 567 WSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKV 626
Query: 366 DMARKYDEEMFAKGLS 381
+ A EM +KGL+
Sbjct: 627 NEAVDLLGEMKSKGLT 642
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 167/387 (43%), Gaps = 45/387 (11%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN+VI L + + +H+M N PN T+ + Y +V +A
Sbjct: 367 TYNTVICGLCRKSRVVEAEECLHKMV-NGGFEPNDFTYNSIIDGYCKKGMVVDANRILKD 425
Query: 93 LDEFGLK-DEVSYCNLVDALCE-------------------------YKHVIEAQELCFG 126
G K DE +YC+LV+ C+ Y +I+ LC
Sbjct: 426 AVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKG--LC-- 481
Query: 127 ENKNVGFSGLVEMNKTK---------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
+ + L MN+ YN+I+ G KM + +G + D+
Sbjct: 482 -QQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDI 540
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
+Y+ +D C+ K A++L M +G+ DV+ YNT++ + + + M +++
Sbjct: 541 FTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKA 600
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
M E GC P+++T NT+I+ LC + +V EA +L EM KG PDV+++ K +
Sbjct: 601 MTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGD 660
Query: 298 I---LGLFDRM-IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
+ GLF M + + TY +++ F ++ ++ +M++ GC PD + Y
Sbjct: 661 LDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYR 720
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGL 380
L+D G ++ K+ E KG
Sbjct: 721 VLIDGFCKTGNVNQGYKFLLENIEKGF 747
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 163/354 (46%), Gaps = 17/354 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+YN++++IL +F F+ + + RMKD + T+ I K + A+
Sbjct: 192 SYNAIMNILVEFGYFNQAHKVYMRMKDKKVE-SDVYTYTIRIKSFCRTGRPYAALRLLRN 250
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEM---NKTKIYNMI 148
+ G + V+YC +V E+ A+EL F ++E +N +
Sbjct: 251 MPVLGCFSNAVAYCTVVTGFYEFGDNDRAREL---------FDEMLECCLCPDVTTFNKL 301
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ K + + ++++ KRGV +L +++I++ +CK G +AV+L + ++G+
Sbjct: 302 VHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGL 361
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ DVV YNTVI + V A +M G +P+ T N++I C+ G V +A
Sbjct: 362 RPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANR 421
Query: 269 VLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+L + KG PD TY C + P + + +F + G+RP + Y L++
Sbjct: 422 ILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLC 481
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ G + P + +M E GC PD + YN +++ L G L A + KG
Sbjct: 482 QQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKG 535
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 122/288 (42%), Gaps = 18/288 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN +I+ L K + +LI IP+ T+ + Y ++ A+ N+
Sbjct: 507 TYNLIINGLCKMGCLSDANHLIGDAI-TKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNR 565
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIYNMI 148
+ G+ D ++Y L++ LC+ E E+ F + E YN I
Sbjct: 566 MWSQGMTPDVITYNTLLNGLCKTAKSEEVMEI---------FKAMTEKGCAPNIITYNTI 616
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK-G 207
+ + + EM +G+ D+ S+ + CK G A L++ M+K+
Sbjct: 617 IESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYD 676
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ YN +I A + A+R++ EM++ GC P T +I C+ G V + Y
Sbjct: 677 VSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGY 736
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRP 312
L E +KG +P + T+ CL K +E +G+ M++ I P
Sbjct: 737 KFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVP 784
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 136/323 (42%), Gaps = 61/323 (18%)
Query: 129 KNVGFSG-------LVEMNKTKIYNMILRGWF--KMSWWGK------CREFWEEMDKRGV 173
+ +GF G L+ ++ + N +L G + M ++G+ + +E MD
Sbjct: 127 QKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQEAVDTFERMDLFNC 186
Query: 174 VKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMR 233
++SY+ M+I+ + G +A K+Y MK K ++ DV Y I++ + A+R
Sbjct: 187 DPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALR 246
Query: 234 VYREMREMGC-----------------------------------QPSVVTCNTVIKLLC 258
+ R M +GC P V T N ++ LC
Sbjct: 247 LLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALC 306
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCFFR------CLEKPREILGLFDRMIESGIRP 312
+ G V E+ + ++ K+G P++ T++ F + L++ +LG R G+RP
Sbjct: 307 KKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSR---EGLRP 363
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
+ TY ++ R + KM G P++F YN+++D KGM+ A +
Sbjct: 364 DVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRIL 423
Query: 373 EEMFAKGLSAKPREELGTKLVQG 395
++ KG KP E LV G
Sbjct: 424 KDAVFKGF--KPDEFTYCSLVNG 444
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 116/270 (42%), Gaps = 21/270 (7%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN+++D + + D + L++RM + P+ T+ + E M F
Sbjct: 542 TYNTLVDGYCRQLKLDSAIELVNRMWSQGMT-PDVITYNTLLNGLCKTAKSEEVMEIFKA 600
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G + +Y ++++LC K V EA +L GE K+ G + V + ++ G
Sbjct: 601 MTEKGCAPNIITYNTIIESLCNSKKVNEAVDL-LGEMKSKGLTPDVVS-----FGTLITG 654
Query: 152 WFKMSWWGKCREFWEEMDKR-GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
+ K+ + M+K+ V +Y+I + + A++L+ EMKK G
Sbjct: 655 FCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDP 714
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
D Y +I + V+ + E E G PS+ T V+ LC +V+EA ++
Sbjct: 715 DNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGII 774
Query: 271 AEMPKKGCVPDV------------ITYHCF 288
M +K VPD ITYH +
Sbjct: 775 HLMVQKDIVPDTVNTIFEADKKGHITYHAY 804
>gi|356560497|ref|XP_003548528.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Glycine max]
Length = 490
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 180/389 (46%), Gaps = 21/389 (5%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
Y +DWK AL F W + F H++++Y+ ++DILG+ + +L+ M++ + N
Sbjct: 85 YKDDWKSALGVFRWASSRPSFRHSSESYDMMVDILGRMKVMEKLRDLLEEMREG--GLVN 142
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV-DALCEYKHVIEAQELCF 125
T +R+V A +A+ F+ L GL+ NL+ D LC+ K V +A+E+
Sbjct: 143 MNTVAKAMRRFVGAGQWVDAVRIFDDLQALGLEKNTESMNLLLDTLCKEKFVQQAREIFL 202
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
+++ +N+ + GW K+ + +EM G + SYS +
Sbjct: 203 ELKQHIA-------PNAHTFNIFIHGWCKICRVDEAHWTIQEMKGYGFHPCVISYSTLIQ 255
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
C+ G + +L EM+ +G +V+ Y +++ A+G ++ + A++V MR GC+P
Sbjct: 256 CYCQEGNFSRVYELLDEMQAQGCSANVITYTSIMCALGKAKKFEEALKVPERMRSSGCRP 315
Query: 246 SVVTCNTVIKLLCENGRVREAYAVL-AEMPKKGCVPDVITYH------CFFRCLEKPREI 298
+ N++I L GR+ +A V EMPK G P+ TY+ C+ ++ EI
Sbjct: 316 DTLFFNSLIHTLGRAGRLDDAADVFKVEMPKAGVSPNTSTYNSMISMFCYHAQEKRALEI 375
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF--VVWKKMEELGCSPDEFAYNALV 356
L + G +P TY L++ R G + V ++ + + S D Y L+
Sbjct: 376 LKEMEN--SGGCKPDAQTYHPLIKSCFRSGKIDGVLSEILNDMINKQHLSLDLSTYTLLI 433
Query: 357 DALIDKGMLDMARKYDEEMFAKGLSAKPR 385
L + + A EEM + + + R
Sbjct: 434 HGLCREDRCNWAFSLFEEMIDQDIIPRYR 462
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 161/364 (44%), Gaps = 51/364 (14%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP-NH 67
+D +LE+F + F HT TY ++ID LG+ E D L+ +MK ++P +
Sbjct: 52 HDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMK--LENVPCSQ 109
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGE 127
F+ + K Y ++L + + F ++ EFG + V
Sbjct: 110 ELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSV------------------------- 144
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
KIYN++L + + + M G+ ++ +Y++ + +
Sbjct: 145 ---------------KIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKAL 189
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
C++GK A KL EM KG D V+Y TVI ++ VD A RE+ M +P V
Sbjct: 190 CQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKA----REL-AMKFEPVV 244
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDR 304
N +I +C+ R +EA+ ++ EM +G P+VI+Y CL + L +F R
Sbjct: 245 PVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGR 304
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
M G RP + T+ L++ F G + +W M G SP+ AYN L+ L G
Sbjct: 305 MFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGN 364
Query: 365 LDMA 368
+D A
Sbjct: 365 MDEA 368
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 152/350 (43%), Gaps = 16/350 (4%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
+ YN V+D L F + L + MK PN T+ ++ K V+ A
Sbjct: 143 SVKIYNLVLDALLSQNLFKMINALYNNMKSEGLE-PNVFTYNVLLKALCQNGKVDGACKL 201
Query: 90 FNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
++ G D+VSY ++ ++C+ V +A+EL + F +V +YN +
Sbjct: 202 LVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELA------MKFEPVV-----PVYNAL 250
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G K + + + EM RGV ++ SYS + + G ++ ++ M +G
Sbjct: 251 IHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGC 310
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ +V + ++I+ V V A+ ++ M G P+VV NT+I LC +G + EA +
Sbjct: 311 RPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAIS 370
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFG 325
V +M K P+V TY K +++ +++MI G RP + Y ++
Sbjct: 371 VWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLC 430
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
+ F + M GC P +N + L G ++ A ++M
Sbjct: 431 QMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQM 480
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 111/243 (45%), Gaps = 3/243 (1%)
Query: 141 KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
+ + +++G+F G W M + GV ++ +Y+ + +C G +A+ ++
Sbjct: 313 NVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVW 372
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
+M+K I+ +V Y+T+I S + A + +M GC+P+VV ++ +LC+
Sbjct: 373 NQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQM 432
Query: 261 GRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTY 317
+A+ ++ M GC P VIT++ F + L + + + + D+M + P + TY
Sbjct: 433 SMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTY 492
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
LL R R + +++EE D YN ++ GM + +M
Sbjct: 493 NELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLV 552
Query: 378 KGL 380
G+
Sbjct: 553 NGI 555
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 143/310 (46%), Gaps = 13/310 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
YN++I L D + ++ ++M+ + S PN T+ + + + + A T+NK
Sbjct: 351 AYNTLIHGLCSDGNMDEAISVWNQMEKD-SIRPNVTTYSTIIYGFAKSGDLVSACETWNK 409
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G + + V Y +VD LC+ +A +L N+ G T +N ++G
Sbjct: 410 MINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLI----DNMISDGCPPTVIT--FNNFIKG 463
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ ++M+K + ++ +Y+ +D + ++ +A L +E++++ ++ D
Sbjct: 464 LCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFD 523
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V YNT++ + +++ +M G + +T NT + C+ G+V+ A VL
Sbjct: 524 CVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLD 583
Query: 272 EM-PKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRK-FGR 326
+ +K D+IT+ + E + M++ GI P + T+ +L+R F +
Sbjct: 584 NISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFFSK 643
Query: 327 WGFLRPVFVV 336
G + P+ ++
Sbjct: 644 LGHMGPIRIL 653
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 172/386 (44%), Gaps = 46/386 (11%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF-- 90
+Y I +LG+ FD +++++ +M+D+ P+ T ++ + A +++A F
Sbjct: 243 SYTICIRVLGQAARFDEAYHILGKMEDSGCK-PDVVTHTVIIQVLCDAGRLSDAKAVFWK 301
Query: 91 ---------------------------------NKLDEFGLKDE-VSYCNLVDALCEYKH 116
N + G D VSY +VDALC+
Sbjct: 302 MKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGR 361
Query: 117 VIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
V EA + F E K G S + YN ++ G+ K + + E + M+ G +
Sbjct: 362 VDEALAV-FDEMKEKGMS-----PEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPN 415
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
+++ ++++ KSG+ KA++ Y+ MK KGI DV A N V+ ++ S + A RV+
Sbjct: 416 GYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFY 475
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---E 293
E++ MG P +T +IK + + EA ++M + GCVPDV+ + L
Sbjct: 476 ELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGG 535
Query: 294 KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
K E LF ++ E I P TY LL GR G ++ V + ++M P+ YN
Sbjct: 536 KGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYN 595
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKG 379
++D L G ++ A M KG
Sbjct: 596 TVLDCLSKNGEVNCAIDMLYSMTEKG 621
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 139/279 (49%), Gaps = 9/279 (3%)
Query: 105 CNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREF 164
C L+ LC++K +EA +L F + K +G S KT YN ++RG + +
Sbjct: 735 CPLIRHLCKHKKALEAHQL-FNKFKGLGVS-----LKTGSYNSLIRGLVDENLIDIAEDL 788
Query: 165 WEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGV 224
+ EM + G D +Y++ +D M KS + + +K+ KEM +KG + V YNT+I +
Sbjct: 789 FTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVK 848
Query: 225 SEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
S+ ++ A+ +Y + G P+ T ++ L ++G++ +A + EM + GC P+
Sbjct: 849 SKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTI 908
Query: 285 YHCFF---RCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKME 341
Y+ R + LF++M+E GI P + +Y +L+ G L ++++
Sbjct: 909 YNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLH 968
Query: 342 ELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
ELG PD YN L+D L ++ A EM KG+
Sbjct: 969 ELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGI 1007
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 120/240 (50%), Gaps = 3/240 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ K + + E ++ M + G+ + +YS+ M K + L EM+
Sbjct: 174 YNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEME 233
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+G+K +V +Y IR +G + D A + +M + GC+P VVT +I++LC+ GR+
Sbjct: 234 ARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLS 293
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFF-RCLEK--PREILGLFDRMIESGIRPKMDTYVMLL 321
+A AV +M PD +TY +C + + ++ +++ M+ G + +Y ++
Sbjct: 294 DAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVV 353
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ G + V+ +M+E G SP++++YN+L+ + M D A + M A G S
Sbjct: 354 DALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPS 413
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 118/236 (50%), Gaps = 5/236 (2%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M + G+ + ++Y+ + + KSG +A+++YK M + GI V Y+ ++ A G
Sbjct: 162 MREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRD 221
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
VD + + EM G +P+V + I++L + R EAY +L +M GC PDV+T+
Sbjct: 222 VDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTV 281
Query: 288 FFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
+ L + + +F +M S +P TY+ LL K G G + V VW M G
Sbjct: 282 IIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADG 341
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGE 400
+ + +Y A+VDAL G +D A +EM KG+S P + L+ G L +
Sbjct: 342 YNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMS--PEQYSYNSLISGFLKAD 395
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 162/356 (45%), Gaps = 17/356 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN+V+D L K E + + ++++ M + + P+ +++ + + + EA F +
Sbjct: 593 TYNTVLDCLSKNGEVNCAIDMLYSMTEKGCA-PDLSSYNTVMYGLIKEERLEEAFRMFCQ 651
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEA----QELCFGENKNVGFSGLVEMNKTKIYNMI 148
+ + D + C ++ + + + EA +E NV S ++ +
Sbjct: 652 MKKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSS---------FHSL 702
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G K + K EF E + RG++ + + +CK K +A +L+ + K G+
Sbjct: 703 MEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGV 762
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ +YN++IR + +D A ++ EM+ +GC P T N ++ + ++ RV E
Sbjct: 763 SLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLK 822
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFG 325
V EM +KG +TY+ L K + + + L+ ++ G P TY LL
Sbjct: 823 VQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLL 882
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ G + ++ +M E GC P+ YN L++ G + + E+M +G++
Sbjct: 883 KSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGIN 938
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 169/353 (47%), Gaps = 13/353 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKD-NPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
+YNS+I K FD + L + M PS PN T + Y + +A+ +
Sbjct: 383 SYNSLISGFLKADMFDRALELFNHMNACGPS--PNGYTHVLFINYYGKSGQSLKAIQRYE 440
Query: 92 KLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G+ +V+ N V + + F E K +G S T Y M+++
Sbjct: 441 HMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVS-----PDTITYTMMIKC 495
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K S + F+ +M + G V D+ + + +D + K GK +A +L+ ++K+ I+
Sbjct: 496 CSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPT 555
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
YNT++ +G V M++ EM P+++T NTV+ L +NG V A +L
Sbjct: 556 NGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLY 615
Query: 272 EMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M +KGC PD+ +Y+ L E+ E +F +M + + P T +L F + G
Sbjct: 616 SMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQM-KKILAPDYATLCTILPSFVKNG 674
Query: 329 FLR-PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
++ + V + + + GC+ D+ ++++L++ ++ K ++ + ++ E + ++G+
Sbjct: 675 LMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGI 727
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 175/420 (41%), Gaps = 60/420 (14%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDIL---GKFFEFDLSWNLIHR-------- 56
A D ALE F HTT++ N +++++ G+ + ++L+ +
Sbjct: 78 APDPAEALELFTAAARQPTKVHTTESCNYMLELMRAHGRVGDMAQVFDLMQKQVVKTNVG 137
Query: 57 --------------MKDNPSSIP---------NHATFRIMFKRYVTAHLVNEAMGTFNKL 93
++ P ++P N T+ + V + EAM + +
Sbjct: 138 TFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAM 197
Query: 94 DEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSG--LVEMNKTKI------ 144
E G+ V +Y L+ A FG+ ++V L EM +
Sbjct: 198 VEDGISPSVRTYSVLMVA--------------FGKKRDVDTVLWLLNEMEARGVKPNVYS 243
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y + +R + + + + +M+ G D+ ++++ + ++C +G+ A ++ +MK
Sbjct: 244 YTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMK 303
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K D V Y T++ G S + V+ M G ++V+ V+ LC+ GRV
Sbjct: 304 ASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVD 363
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLL 321
EA AV EM +KG P+ +Y+ K L LF+ M G P T+V+ +
Sbjct: 364 EALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFI 423
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+G+ G ++ M+ G PD A NA++ +L G L MA++ E+ A G+S
Sbjct: 424 NYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVS 483
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 143/296 (48%), Gaps = 11/296 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF-N 91
TYN ++D +GK + + M + T+ + V + + +A+ + N
Sbjct: 803 TYNLILDAMGKSMRVEEMLKVQKEMHRKGYE-STYVTYNTIISGLVKSKRLEQAIDLYYN 861
Query: 92 KLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E +Y L+D L + +++A+ L F E G E N T IYN++L G
Sbjct: 862 LMSEGFSPTPCTYGPLLDGLLKSGKMVDAENL-FNEMLEYG----CEPNCT-IYNILLNG 915
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ +E+M ++G+ D+ SY+I +D +C +G+ + ++++ + G++ D
Sbjct: 916 HRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPD 975
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
++ YN +I +G SE ++ A+ ++ EM++ G P++ T N++I L + G+ EA +
Sbjct: 976 LIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYE 1035
Query: 272 EMPKKGCVPDVITYHCFFRCLE---KPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
E+ +KG P V TY+ R + +MI G +P TY+ L +
Sbjct: 1036 ELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSSTYMQLPNQL 1091
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 152/333 (45%), Gaps = 11/333 (3%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T +YNS+I L D++ +L MK P+ T+ ++ + V E +
Sbjct: 766 TGSYNSLIRGLVDENLIDIAEDLFTEMK-RLGCGPDEFTYNLILDAMGKSMRVEEMLKVQ 824
Query: 91 NKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
++ G + V+Y ++ L + K + +A +L + N+ G T Y +L
Sbjct: 825 KEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYY----NLMSEGFSPTPCT--YGPLL 878
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G K + EM + G + Y+I ++ +G +L+++M ++GI
Sbjct: 879 DGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGIN 938
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
D+ +Y +I + + ++ + +R++ E+G +P ++ N +I L ++ R+ EA ++
Sbjct: 939 PDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSL 998
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGR 326
EM KKG +P++ TY+ L K + +++ ++ G +P + TY L+R +
Sbjct: 999 FNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSV 1058
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
G + + +M GC P+ Y L + L
Sbjct: 1059 SGSTDNAYAAYGQMIVGGCQPNSSTYMQLPNQL 1091
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 136/316 (43%), Gaps = 10/316 (3%)
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFG 126
++ + + V +L++ A F ++ G DE +Y ++DA+ + V E ++
Sbjct: 767 GSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKV--- 823
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
K + G T YN I+ G K + + + + G +Y +D
Sbjct: 824 -QKEMHRKGYESTYVT--YNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDG 880
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+ KSGK A L+ EM + G + + YN ++ ++ + +++ +M E G P
Sbjct: 881 LLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPD 940
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFD 303
+ + +I LC GR+ + ++ + G PD+I Y+ L E+ E + LF+
Sbjct: 941 IKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFN 1000
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
M + GI P + TY L+ G+ G +++++ G P F YNAL+ G
Sbjct: 1001 EMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSG 1060
Query: 364 MLDMARKYDEEMFAKG 379
D A +M G
Sbjct: 1061 STDNAYAAYGQMIVGG 1076
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 155/398 (38%), Gaps = 88/398 (22%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ +M K A +EAM F+ + E G + D ++ +L+D L + EA +L
Sbjct: 484 PDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQL 543
Query: 124 CFGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
F L EM YN +L G + + + EEM + +L +Y
Sbjct: 544 ---------FHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITY 594
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ +D + K+G+ A+ + M +KG D+ +YNTV+ + E ++ A R++ +M++
Sbjct: 595 NTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKK 654
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAE-MPKKGCVPDVITYHC------------ 287
+ P T T++ +NG ++EA + E + K GC D ++H
Sbjct: 655 I-LAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVE 713
Query: 288 ------------------FFRCL--------EKPREILGLFDRMIESGIRPKMDTYVMLL 321
FF C +K E LF++ G+ K +Y L+
Sbjct: 714 KSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLI 773
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN---------------------------- 353
R + ++ +M+ LGC PDEF YN
Sbjct: 774 RGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYE 833
Query: 354 -------ALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
++ L+ L+ A + ++G S P
Sbjct: 834 STYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTP 871
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 152/307 (49%), Gaps = 25/307 (8%)
Query: 89 TFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI--- 144
F + ++GLK V+ CN L+ L + GE ++ F EM + +I
Sbjct: 115 AFKRASDYGLKLSVTSCNPLMSGLVK-----------VGEIGDMEFV-YKEMIRRRIEPT 162
Query: 145 ---YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP---WKAVK 198
+N+++ G K+ K + E+M RGV ++ +Y+ +D CK GK +KA
Sbjct: 163 LISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADA 222
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
+ KEM+ GI + V +N +I + V AM+V+ EM G +P+VVT N++I LC
Sbjct: 223 ILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLC 282
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPREILG-LFDRMIESGIRPKMD 315
NG+V EA A+ +M P++IT++ C K + G LFD M + GI P +
Sbjct: 283 NNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVT 342
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
TY +L+ + + + F +++ M G PD YN L+ L KG L+ AR EM
Sbjct: 343 TYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEM 402
Query: 376 FAKGLSA 382
K L A
Sbjct: 403 DTKHLKA 409
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 165/343 (48%), Gaps = 20/343 (5%)
Query: 33 TYNSVID------ILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
TYN++ID +GK ++ D ++ M+ + PN TF I+ + V+ A
Sbjct: 200 TYNTLIDGYCKMGKIGKMYKADA---ILKEMRAD-GICPNEVTFNILIDGFCKDKNVSAA 255
Query: 87 MGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
M F +++ G+K + V+Y +L++ LC V EA L ++ + ++ N +
Sbjct: 256 MKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATAL-----RDQMVNSCLKPNII-TH 309
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N +L G+ K + E +++M K+G+ ++ +Y+I +D CK A LY+ M
Sbjct: 310 NALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLG 369
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
KG+ DV YN +I + ++ A + EM + ++T N +I LC G +++
Sbjct: 370 KGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKK 429
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLR 322
A +L EM +KG P +TY+ C E R L L +M + G + TY +L++
Sbjct: 430 ALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIK 489
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
F + L + +M E G P+ Y + + +++KG +
Sbjct: 490 GFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFV 532
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 162/364 (44%), Gaps = 26/364 (7%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNE---A 86
T ++N VI+ L K + + + ++I MK S N T+ + Y + + A
Sbjct: 162 TLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVS-ANVITYNTLIDGYCKMGKIGKMYKA 220
Query: 87 MGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI- 144
++ G+ +EV++ L+D C+ K+V A ++ EMN+ +
Sbjct: 221 DAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKV------------FAEMNRQGVK 268
Query: 145 -----YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKL 199
YN ++ G + ++M + ++ +++ ++ CK+ +A +L
Sbjct: 269 PNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGEL 328
Query: 200 YKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCE 259
+ +M K+GI +V YN +I A E ++ A +YR M G P V T N +I LC
Sbjct: 329 FDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCR 388
Query: 260 NGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDT 316
G + A +++EM K D+ITY+ L E+ L L D M G++P T
Sbjct: 389 KGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLT 448
Query: 317 YVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
Y ++ + + G LR + +ME++G + YN L+ K L+ A EM
Sbjct: 449 YNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEML 508
Query: 377 AKGL 380
KGL
Sbjct: 509 EKGL 512
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 111/260 (42%), Gaps = 43/260 (16%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
E ++ G+ + S + M + K G+ +YKEM ++ I+ ++++N VI +
Sbjct: 114 EAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGL 173
Query: 223 -------------------GVSEGVDF-------------------AMRVYREMREMGCQ 244
GVS V A + +EMR G
Sbjct: 174 CKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGIC 233
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGL 301
P+ VT N +I C++ V A V AEM ++G P+V+TY+ L K E L
Sbjct: 234 PNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATAL 293
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI- 360
D+M+ S ++P + T+ LL F + ++ ++ M + G +P+ YN L+DA
Sbjct: 294 RDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCK 353
Query: 361 DKGMLDMARKYDEEMFAKGL 380
D+ M D Y M KG+
Sbjct: 354 DENMEDAFALY-RIMLGKGV 372
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 160/356 (44%), Gaps = 43/356 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+ ++D K + + L+ M+ P+ T+ ++ V+EA+ +
Sbjct: 288 TYSILLDATCKESGYRQAMALLDEMRAK-GCEPDIVTYNVLINAMCNEGDVDEALNILSN 346
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK------IY 145
L G K D V+Y ++ +LC + E +EL L EM +
Sbjct: 347 LPSHGCKPDAVTYTPVLKSLCGSERWKEVEEL------------LAEMTSNNCAPDEVTF 394
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N I+ + + E + M + G V D+ +YS +D +C G+ AV+L +K
Sbjct: 395 NTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKS 454
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G K D +AY TV++ + +E + A + EM C P VT NTV+ LC+ G V
Sbjct: 455 YGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDR 514
Query: 266 AYAVLAEMPKKGCVPDVITYHCFF------RCLEKPREILGLFDRMIESGIRPKMDTYVM 319
A V+ +M + GC PD++TY+C C++ E+L + G +P + T+
Sbjct: 515 AIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLS---DLQSCGCKPDIVTFNT 571
Query: 320 LLRKFGRWGFLRPVFVVWKKMEEL-------GCSPDEFAYNALVDALIDKGMLDMA 368
LL+ G G R W+ E+L C PDE +N ++ +L KG+L A
Sbjct: 572 LLK--GLCGVDR-----WEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQA 620
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 150/360 (41%), Gaps = 59/360 (16%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELC 124
P I+ KR + V++A F L V+Y +V+ C + +A+ L
Sbjct: 185 PPVVPCNILIKRLCSDGRVSDAERVFAALGPSATV--VTYNTMVNGYCRAGRIEDARRL- 241
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+G+ T +N ++R +++M RG + +YSI +
Sbjct: 242 --------INGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILL 293
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D CK +A+ L EM+ KG + D+V YN +I A+ VD A+ + + GC+
Sbjct: 294 DATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCK 353
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDR 304
P VT V+K LC + R +E +LAEM C PD +T++ L + GL DR
Sbjct: 354 PDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQ----QGLVDR 409
Query: 305 MIE-----------------SGIRP------KMDTYVMLLRKFGRWGFLRPVFVV----- 336
IE S I ++D V LL + +G +P +
Sbjct: 410 AIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYG-CKPDTIAYTTVL 468
Query: 337 --------WKKMEEL-------GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
W++ EEL C PDE +N +V +L KG++D A + E+M G S
Sbjct: 469 KGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCS 528
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 153/388 (39%), Gaps = 48/388 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY V+ L + L+ M N + P+ TF + LV+ A+ +
Sbjct: 358 TYTPVLKSLCGSERWKEVEELLAEMTSN-NCAPDEVTFNTIVTSLCQQGLVDRAIEVVDH 416
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G + D V+Y +++D LC+ V +A EL K+ G T Y +L+G
Sbjct: 417 MSEHGCVADIVTYSSILDGLCDVGRVDDAVEL-LSRLKSYGCKP-----DTIAYTTVLKG 470
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
W + E EM D +++ + +C+ G +A+++ ++M + G D
Sbjct: 471 LCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPD 530
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT---------------------- 249
+V YN +I + +D AM + +++ GC+P +VT
Sbjct: 531 IVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMA 590
Query: 250 ------C-------NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---E 293
C NTVI LC+ G + +A L M + GCVP+ TY L
Sbjct: 591 NMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAG 650
Query: 294 KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
K + L L M P + TY ++ + G + + + M G PD Y
Sbjct: 651 KAQAALELLSGMTNG--TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYR 708
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGLS 381
+L + + D A + + GLS
Sbjct: 709 SLAYGVCREDGTDRAVRMLRRVQDTGLS 736
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 144/347 (41%), Gaps = 22/347 (6%)
Query: 6 CYANDWKRALEFF-NWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C W+RA E + +DC T +N+V+ L + D + ++ +M +N S
Sbjct: 472 CSTEQWERAEELMAEMLCSDCPPDEVT--FNTVVASLCQKGLVDRAIRVVEQMSENGCS- 528
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ + +++AM + L G K D V++ L+ LC +A++L
Sbjct: 529 PDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQL 588
Query: 124 CFGENKNVGFSGLVEMNKTK---IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+ ++ N +N ++ + + E + M + G V + +Y
Sbjct: 589 ---------MANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTY 639
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
SI +D + K+GK A++L M D++ YNTVI + + ++ A+ + R M
Sbjct: 640 SIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTKAGKMEEALDLLRVMVS 697
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPREI 298
G P T ++ +C A +L + G PD Y+ C ++ ++
Sbjct: 698 NGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDL 757
Query: 299 -LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
+ F M+ SG P TYV+LL G L + + LG
Sbjct: 758 AIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLG 804
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 34/186 (18%)
Query: 228 VDFAMRVYREMREMGCQ--PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV------ 279
+D A+ ++ M G + P VV CN +IK LC +GRV +A V A + V
Sbjct: 166 IDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGPSATVVTYNTM 225
Query: 280 -----------------------PDVITYHCFFRCL---EKPREILGLFDRMIESGIRPK 313
PD T++ R L + + L +FD M+ G P
Sbjct: 226 VNGYCRAGRIEDARRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPS 285
Query: 314 MDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDE 373
+ TY +LL + R + +M GC PD YN L++A+ ++G +D A
Sbjct: 286 VVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILS 345
Query: 374 EMFAKG 379
+ + G
Sbjct: 346 NLPSHG 351
>gi|222641466|gb|EEE69598.1| hypothetical protein OsJ_29150 [Oryza sativa Japonica Group]
Length = 579
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 162/354 (45%), Gaps = 15/354 (4%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
+L FF + F+H D+ + + L F L +L + D P S + F ++
Sbjct: 105 SLRFFLFAGELPGFSHHPDSLLVLANSLAGARLFPLLRSL---LSDLPPSALSRGLFPLL 161
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNVG 132
F+ Y A L +A+ F+ + FG ++ + +L+ AL ++E E F E+
Sbjct: 162 FRAYSRARLPEDAIRAFSSMAGFGFPPTIADFHSLLFALSR-NGLVEYGERFFRES---- 216
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
+ +++ K Y +++ GW + R ++EM KRGV D+H Y+ +D +C+ G
Sbjct: 217 -TAQFDVS-AKAYTILISGWAVVKKPENARSLFDEMVKRGVELDVHVYNALIDALCRGGD 274
Query: 193 PWKAVKLYKEMKKK-GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
A + M+K G+ + Y + A S+ V A+RV M P+V T N
Sbjct: 275 ITSAQEQLSNMQKSHGLVPNAATYGPFLHAACASKDVRAALRVLDRMHTHALTPNVFTYN 334
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIES 308
VI+LLC+ G + EAY +L E+ +G PDV +Y+ K +E+ L L RM +
Sbjct: 335 AVIRLLCDLGEINEAYNILDEITTQGEKPDVWSYNTLLNAHCKLKEVNKALRLISRMDKE 394
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
P +Y MLL+ G VW ME+ G P Y ++ L K
Sbjct: 395 LCPPDRHSYNMLLKMLISVGRFDTAIEVWDGMEKRGFHPGAATYAVMIHGLASK 448
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 166/362 (45%), Gaps = 45/362 (12%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKR 76
FF W F + T+N VID+L K FD W ++ +K++ IP TF ++
Sbjct: 83 FFIWTTRRRSF-RSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIP-PPTFSVLIAA 140
Query: 77 YVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGL 136
Y + + +A+ +F K+ +FG K +V N + HV+ +E
Sbjct: 141 YAKSGMAEKAVESFGKMKDFGCKPDVFTYNSI------LHVMVQKE-------------- 180
Query: 137 VEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKA 196
V + +YN +L+ + + ++ I ++ +CK+GK A
Sbjct: 181 VFLLALAVYNQMLKLNYN--------------------PNRATFVILLNGLCKNGKTDDA 220
Query: 197 VKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKL 256
+K++ EM +KGI + + Y ++ + ++ D R+ M+ GC P +TCN ++
Sbjct: 221 LKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDG 280
Query: 257 LCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPK 313
C+ G++ EA+A+L K+G V + Y L + + E+ +M ++GI P
Sbjct: 281 FCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPD 340
Query: 314 MDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDE 373
+ Y +L+R F G + + M + G SPD + YNAL+ D G+LD AR
Sbjct: 341 VVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQL 400
Query: 374 EM 375
E+
Sbjct: 401 EI 402
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 134/305 (43%), Gaps = 28/305 (9%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWG 159
D V Y L+ CE V A + + G S T YN +++G+ +
Sbjct: 340 DVVLYTILIRGFCEVGMVDYALNM-LNDMTQRGLSP-----DTYCYNALIKGFCDVGLLD 393
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
K R E+ K +Y+I + MC++G +A +++ +M+ G ++ +N +I
Sbjct: 394 KARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALI 453
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSV--------------VTCNTVIKLLCENGRVRE 265
+ + ++ A ++ +M E+G PS+ + T+++ LCE+G + +
Sbjct: 454 DGLCKAGELEEARHLFYKM-EIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILK 512
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLR 322
AY +L ++ G VPD++TY+ K + I G LF + G P TY L+
Sbjct: 513 AYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLID 572
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
F R F V +M + GC+P Y L+ KG L +A ++ K L +
Sbjct: 573 GFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAF----SLWLKYLRS 628
Query: 383 KPREE 387
P +E
Sbjct: 629 LPSQE 633
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 114/243 (46%), Gaps = 9/243 (3%)
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
++W + EE+ + ++S+ + KSG KAV+ + +MK G K DV Y
Sbjct: 114 TYW----KILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTY 169
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
N+++ + E A+ VY +M ++ P+ T ++ LC+NG+ +A + EM +
Sbjct: 170 NSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQ 229
Query: 276 KGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
KG P+ + Y L ++ ++ L + M SG P T LL F + G +
Sbjct: 230 KGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDE 289
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKL 392
F + + E+ G Y++L+D L D +++ +MF G+ +P L T L
Sbjct: 290 AFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGI--EPDVVLYTIL 347
Query: 393 VQG 395
++G
Sbjct: 348 IRG 350
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 105/259 (40%), Gaps = 30/259 (11%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T YN++I D + +L + N P T+ I+ L++EA F
Sbjct: 376 TYCYNALIKGFCDVGLLDKARSLQLEISKN-DCFPTSCTYTILICGMCRNGLLDEARQIF 434
Query: 91 NKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
N+++ G + ++ L+D LC+ + EA+ L
Sbjct: 435 NQMENLGCSPSIMTFNALIDGLCKAGELEEARHL-------------------------- 468
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
++KM F V D S ++ +C+SG KA KL ++ G+
Sbjct: 469 --FYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVV 526
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
D++ YN +I ++ ++ A +++RE++ G P VT T+I R +A+ V
Sbjct: 527 PDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRV 586
Query: 270 LAEMPKKGCVPDVITYHCF 288
L +M K GC P Y C
Sbjct: 587 LDQMVKNGCTPSSAVYKCL 605
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 194/427 (45%), Gaps = 40/427 (9%)
Query: 4 LSCYANDWK--RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
L+C K AL ++ D T+ YN +ID+L K E + + + MK+
Sbjct: 384 LTCLGRKGKVEEALRILEAMKMDAAPNLTS--YNILIDMLCKAGELEAALKVQDSMKE-A 440
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLD-EFGLKDEVSYCNLVDALCEYKHVIEA 120
PN T IM R A ++EA F LD + D V++C+L+D L + V +A
Sbjct: 441 GLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDA 500
Query: 121 -----QELCFGENKN-VGFSGLV--------EMNKTKIYN-----------MILRGW--- 152
+ L G+ N V ++ L+ + + KIY M+L +
Sbjct: 501 YMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDC 560
Query: 153 -FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
FK K R +EE+ +G+ D+ SYSI + + K G KL+ EMK++G+ +D
Sbjct: 561 VFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLD 620
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
AYN VI S V+ A ++ EM+ G QP+VVT +VI L + R+ EAY +
Sbjct: 621 TRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFE 680
Query: 272 EMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
E K +V+ Y F + + E + + +++ G+ P T+ LL +
Sbjct: 681 EAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAE 740
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREEL 388
+ V ++ M+ L C P+E Y+ +V+ L + A + +EM +GL KP
Sbjct: 741 EIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGL--KPNTIT 798
Query: 389 GTKLVQG 395
T ++ G
Sbjct: 799 YTTMISG 805
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 167/357 (46%), Gaps = 13/357 (3%)
Query: 28 THTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAM 87
T + T+ S+ID LG+ + + ++ L +M D+ + PN + + + + +
Sbjct: 478 TPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQT-PNAVVYTSLIRNFFKCGRKEDGH 536
Query: 88 GTFNKLDEFGLK-DEVSYCNLVDALCEYKH-VIEAQELCFGENKNVGFSGLVEMNKTKIY 145
+ ++ G D + N +D C +K IE F E K G + V + Y
Sbjct: 537 KIYKEMMHRGCSPDLMLLNNYMD--CVFKAGEIEKGRALFEEIKAQGLTPDV-----RSY 589
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
++++ G K + + + EM ++G+ D +Y+I +D CKSGK KA +L +EMK
Sbjct: 590 SILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKT 649
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
KG++ VV Y +VI + + +D A ++ E + +VV +++I + GR+ E
Sbjct: 650 KGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDE 709
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLR 322
AY +L E+ +KG P+ T++C L K EI L F M P TY +++
Sbjct: 710 AYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVN 769
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ FV W++M++ G P+ Y ++ L G + A+ E + G
Sbjct: 770 GLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSG 826
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 157/363 (43%), Gaps = 12/363 (3%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D + AL +F WVE H+ + YN+++ ++ + + ++ M P++ T
Sbjct: 111 DVRVALHYFRWVERKTKQLHSPEAYNALLMLMARTRNLEYLEQILEEM-SMAGFGPSNNT 169
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGEN 128
M +V + + EA G + +F + S Y L+ AL H + +
Sbjct: 170 CIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGAL-SAAHEADPMLTLLRQM 228
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
+ +G+ V + T I G + +EM DL Y++ +D
Sbjct: 229 QEIGYEVTVHLFTTLICVFAREGRVDAAL-----SLLDEMKSNSFNADLVLYNVCIDCFG 283
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
K GK A K + E+K +G+ D V + ++I + +E VD A+ ++ E+ P V
Sbjct: 284 KVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVY 343
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRM 305
NT+I G+ EAY++L +KGC+P VI Y+C CL K E L + + M
Sbjct: 344 AYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM 403
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
+ P + +Y +L+ + G L V M+E G P+ N ++D L L
Sbjct: 404 -KMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRL 462
Query: 366 DMA 368
D A
Sbjct: 463 DEA 465
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 173/407 (42%), Gaps = 48/407 (11%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
AL + ++++ F YN ID GK + D++W H +K +P+ TF M
Sbjct: 256 ALSLLDEMKSN-SFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQ-GLVPDDVTFTSM 313
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVG 132
A V+EA+ F +LD V +Y ++ EA L + +
Sbjct: 314 IGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGC 373
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
++ YN IL + + E M K +L SY+I +D++CK+G+
Sbjct: 374 IPSVIA------YNCILTCLGRKGKVEEALRILEAM-KMDAAPNLTSYNILIDMLCKAGE 426
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
A+K+ MK+ G+ +++ N +I + ++ +D A ++ + C P VT +
Sbjct: 427 LEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCS 486
Query: 253 VIKLLCENGRVREAY-----------------------------------AVLAEMPKKG 277
+I L +G+V +AY + EM +G
Sbjct: 487 LIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRG 546
Query: 278 CVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
C PD++ + + C+ K EI LF+ + G+ P + +Y +L+ + GF + +
Sbjct: 547 CSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTY 606
Query: 335 VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
++ +M+E G D AYN ++D G ++ A + EEM KGL
Sbjct: 607 KLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQ 653
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 136/301 (45%), Gaps = 11/301 (3%)
Query: 50 SWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLV 108
++ L + MK+ + A + I+ + + VN+A ++ GL+ V +Y +++
Sbjct: 605 TYKLFYEMKEQGLHLDTRA-YNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVI 663
Query: 109 DALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM 168
D L + + EA L F E K S V++N +Y+ ++ G+ K+ + EE+
Sbjct: 664 DGLAKIDRLDEAYML-FEEAK----SKAVDLNVV-VYSSLIDGFGKVGRIDEAYLILEEL 717
Query: 169 DKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV 228
++G+ + ++++ +D + K+ + +A+ ++ MK + V Y+ ++ +
Sbjct: 718 MQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKF 777
Query: 229 DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
+ A ++EM++ G +P+ +T T+I L G V EA + G +PD Y+
Sbjct: 778 NKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAM 837
Query: 289 FRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
L + + LF+ G R T V+LL + L +V + E+
Sbjct: 838 IEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQAAIVGAVLREMAK 897
Query: 346 S 346
S
Sbjct: 898 S 898
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 117/274 (42%), Gaps = 12/274 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + +A + ++T T TY SVID L K D ++ L K +
Sbjct: 632 CKSGKVNKAYQLLEEMKTK-GLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDL- 689
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELC 124
N + + + ++EA +L + GL N L+DAL + + + EA +C
Sbjct: 690 NVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEAL-VC 748
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F KN+ Y++++ G K+ + K FW+EM K+G+ + +Y+ +
Sbjct: 749 FQNMKNLKCP-----PNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMI 803
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ + G +A L++ K G D YN +I + + A ++ E R GC+
Sbjct: 804 SGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCR 863
Query: 245 PSVVTCNTVIKLLCENGRVREAY---AVLAEMPK 275
TC ++ L + + +A AVL EM K
Sbjct: 864 IYSKTCVVLLDALHKADCLEQAAIVGAVLREMAK 897
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 3/170 (1%)
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
AYN ++ + + +++ ++ EM G PS TC ++ ++ ++REA+ V+ M
Sbjct: 134 AYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETM 193
Query: 274 PKKGCVPDVITYHCFFRCLEKPRE---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
K P Y L E +L L +M E G + + L+ F R G +
Sbjct: 194 RKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRV 253
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ +M+ + D YN +D G +DMA K+ E+ ++GL
Sbjct: 254 DAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGL 303
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 174/402 (43%), Gaps = 43/402 (10%)
Query: 9 NDWKRALEFFNW--------VETDCHFTHTTDT---------------YNSVIDI---LG 42
ND++ L FF W +E C N +D+ G
Sbjct: 106 NDYRLVLSFFEWACLRRDPSLEARCIVAQIATASKDLKMARKLIQDFWVNPNLDVGVSFG 165
Query: 43 KFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV 102
F E LI+ KD S + F I F+ V A +++EA F+K+ +GL V
Sbjct: 166 HFVE-----QLIYTYKDWGS---DPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISV 217
Query: 103 SYCNL-VDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKC 161
CNL + L E I+ F E VG T YN+I ++ +
Sbjct: 218 DSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCW-----NTASYNIITHSLCQLGRVVEA 272
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
+ +M+ RG + D+ SYS ++ C+ G+ + +KL +EM+ KG+K + YN VI
Sbjct: 273 HQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILL 332
Query: 222 VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
+ + V A RV REM G P V T+I C+ G V AY + EM K+ PD
Sbjct: 333 LCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPD 392
Query: 282 VITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWK 338
ITY L + ++ LF M+ + P TY L+ + + G ++ F +
Sbjct: 393 FITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHN 452
Query: 339 KMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+M ++G +P+ Y AL D L G +D A + EM KGL
Sbjct: 453 QMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGL 494
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 163/353 (46%), Gaps = 11/353 (3%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
Y ++ID K ++ L M+ S P+ T+ + V EA F+++
Sbjct: 361 YTTLIDGFCKLGNVSSAYRLFDEMQKRKIS-PDFITYTAVICGLCQTGRVMEADKLFHEM 419
Query: 94 DEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
L+ DEV+Y L+D C+ + EA F + + GL T Y + G
Sbjct: 420 VCKRLEPDEVTYTALIDGYCKEGKMKEA----FSLHNQMLQMGLTPNIVT--YTALADGL 473
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K E EM ++G+ ++++Y+ ++ +CK+G +AVKL K+M+ G D
Sbjct: 474 CKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDA 533
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V Y T++ A S + A + R+M + QP+VVT N ++ C +G + + +L
Sbjct: 534 VTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKW 593
Query: 273 MPKKGCVPDVITYHCFFR--CLEKP-REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M +KG +P+ TY+ + C+ R ++ M G+ P +TY +L++ +
Sbjct: 594 MLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARN 653
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
++ + + + M G + +YNAL+ + AR+ E+M +GL A
Sbjct: 654 MKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVA 706
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 140/320 (43%), Gaps = 10/320 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQEL 123
P+ T+ + Y + EA N++ + GL V+Y L D LC+ V A EL
Sbjct: 426 PDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANEL 485
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ GL E+N YN ++ G K + + ++M+ G D +Y+
Sbjct: 486 L----HEMCRKGL-ELN-IYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTL 539
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
MD CKS + +A +L ++M + ++ VV +N ++ +S ++ ++ + M E G
Sbjct: 540 MDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGI 599
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILG 300
P+ T N++IK C +R + M KG VPD TY+ + K R E
Sbjct: 600 MPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWF 659
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L M+ G + +Y L++ F + ++++M G D YN D
Sbjct: 660 LHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINY 719
Query: 361 DKGMLDMARKYDEEMFAKGL 380
D+G +++ + +E K L
Sbjct: 720 DEGKMELTLELCDEAIEKCL 739
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 4/210 (1%)
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVS-EGVDFAMRV 234
D + I+ ++ ++G +A KL+ +M G+ + V + N I + +G+ A++V
Sbjct: 181 DPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKV 240
Query: 235 YREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--C- 291
+ E E+G + + N + LC+ GRV EA+ +L +M +GC+PDVI+Y C
Sbjct: 241 FVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQ 300
Query: 292 LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFA 351
+ + + +L L + M G++P TY ++ + G + V ++M G +PD
Sbjct: 301 VGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVI 360
Query: 352 YNALVDALIDKGMLDMARKYDEEMFAKGLS 381
Y L+D G + A + +EM + +S
Sbjct: 361 YTTLIDGFCKLGNVSSAYRLFDEMQKRKIS 390
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 120/285 (42%), Gaps = 11/285 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C K A N + T TY ++ D L K E D + L+H M +
Sbjct: 439 CKEGKMKEAFSLHNQM-LQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLEL- 496
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N T+ + A +++A+ ++ G D V+Y L+DA C+ + ++ A EL
Sbjct: 497 NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELL 556
Query: 125 FGENKNVGFSGLVEMNKTKI-YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
E+ T + +N+++ G+ + + M ++G++ + +Y+
Sbjct: 557 RQMLDR-------ELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSL 609
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ C ++Y+ M KG+ D YN +I+ + + A ++R+M G
Sbjct: 610 IKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGF 669
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
+V + N +IK + + EA + +M ++G V D Y+ F
Sbjct: 670 NLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIF 714
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 13/158 (8%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQE 122
+PN T+ + K+Y + + + + G+ D +Y L+ C+ +++ EA
Sbjct: 600 MPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWF 659
Query: 123 L---CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
L G+ N+ S YN +++G++K + + RE +E+M + G+V D
Sbjct: 660 LHRDMVGKGFNLTVSS---------YNALIKGFYKRKKFLEARELFEQMRREGLVADREI 710
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
Y+I+ DI GK ++L E +K + D+ NT
Sbjct: 711 YNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 748
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 7/167 (4%)
Query: 222 VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
VGVS G F ++ ++ G P V + ++L E G + EA + +M G +
Sbjct: 160 VGVSFG-HFVEQLIYTYKDWGSDPRVF--DIFFQVLVEAGMLDEARKLFDKMLNYGLLIS 216
Query: 282 VITYHCFFRCLEKPRE----ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVW 337
V + + F L + + L +F E G+ +Y ++ + G + +
Sbjct: 217 VDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLL 276
Query: 338 KKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
+ME GC PD +Y+ +++ G L K EEM KGL P
Sbjct: 277 LQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNP 323
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 181/393 (46%), Gaps = 27/393 (6%)
Query: 6 CYANDWKRALEFFNWV-ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C A A E F+ + E+ C + TYN ++ L K ++ + M+
Sbjct: 321 CQARRVDEAFELFDVMKESGC--SADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCS 378
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEF-GLK-DEVSYCNLVDALCEYKHVIEAQE 122
PN TF + + A VN+A + ++ G+ + +Y L++ LC+ ++
Sbjct: 379 PNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQ 438
Query: 123 LCFGE---------------NKNVGFSGLVEMNKTKI-YNMILRGWFKMSWWGKCREFWE 166
CF + + V F + T + YN ++ G K E
Sbjct: 439 -CFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLE 497
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
M + G+ D+ +++ +D +CK + A ++K ++G + +VV Y+T+I +
Sbjct: 498 FMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMA 557
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
+D A+++ +M E+GC+ + VT +TV+ L + GR+ +A VL +M GC+PD +TY+
Sbjct: 558 KMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYN 617
Query: 287 C----FFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE 342
FF+ ++ RE +GL M+E+G P + TY L R G + M
Sbjct: 618 TLIDGFFK-RQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAA 676
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
GC+P+ Y+++VD L G + A Y E+M
Sbjct: 677 RGCAPNAITYSSIVDGLCKAGRVTEALGYFEKM 709
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 146/309 (47%), Gaps = 15/309 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P T+ + + +V +A+G + E GL D +++ +++D LC+ + +++A
Sbjct: 471 PTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAH-- 528
Query: 124 CFGENKNVGFSGLVEMNKTKI--YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
NV L + + Y+ ++ G KM+ + + +M + G + +YS
Sbjct: 529 ------NVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYS 582
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+D + K G+ AV + ++M+ G D V YNT+I + + A+ + REM E
Sbjct: 583 TVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEA 642
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REI 298
G PSVVT T+ LC +GR EA +L M +GC P+ ITY L K E
Sbjct: 643 GFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEA 702
Query: 299 LGLFDRMI-ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
LG F++M + + P + Y L+ + G + + ++M G PD ++ L++
Sbjct: 703 LGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILIN 762
Query: 358 ALIDKGMLD 366
L D G +D
Sbjct: 763 GLCDAGRID 771
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 158/360 (43%), Gaps = 18/360 (5%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TYN+++ L K + L+ M ++ S P+ TF + + +A
Sbjct: 472 TLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLS-PDVITFNSVLDGLCKEQRILDAHNV 530
Query: 90 FNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIY 145
F + E G + + V+Y L+D L + + EA +L + +VE+ T Y
Sbjct: 531 FKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQL---------LAKMVELGCRANTVTY 581
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
+ ++ G K+ +M G + D +Y+ +D K + +AV L +EM +
Sbjct: 582 STVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLE 641
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G VV Y T+ + S D A+ + M GC P+ +T ++++ LC+ GRV E
Sbjct: 642 AGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTE 701
Query: 266 AYAVLAEMPKKGCV-PDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLL 321
A +M + V P VI Y L K E +RMI +G P + T+ +L+
Sbjct: 702 ALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILI 761
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G + ++ M E GC D +AYNA+++A KG A EEM G++
Sbjct: 762 NGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIA 821
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 174/409 (42%), Gaps = 41/409 (10%)
Query: 21 VETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTA 80
VE C T TY++V+D L K + + ++ +M+D +P+ T+ + +
Sbjct: 570 VELGCR--ANTVTYSTVVDGLLKVGRMEDAVVVLRQMRD-AGCLPDAVTYNTLIDGFFKR 626
Query: 81 HLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL-----CFGENKN-VGF 133
+ EA+G ++ E G V +Y L LC EA E+ G N + +
Sbjct: 627 QRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITY 686
Query: 134 SGLVE-----------------MNKTKI-------YNMILRGWFKMSWWGKCREFWEEMD 169
S +V+ M + ++ Y+ ++ G K + EF E M
Sbjct: 687 SSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMI 746
Query: 170 KRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVD 229
+ G + D+ ++SI ++ +C +G+ ++L+ M ++G K D+ AYN +I A +
Sbjct: 747 RAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFS 806
Query: 230 FAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF 289
A + EM+ G + VT VIK LC N R+ EA + +P+ D I+Y+
Sbjct: 807 AAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPED--CRDEISYNTLI 864
Query: 290 RCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
L R + L L M+ G P Y+ ++ + G + ++M G S
Sbjct: 865 TSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHS 924
Query: 347 PDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
PD Y ++ L L +A Y EEM K L KP + + L+
Sbjct: 925 PDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNL--KPDAIVYSSLIDA 971
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 102/193 (52%), Gaps = 3/193 (1%)
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+Y++ ++ +CK+G+ A +++ + G + VV Y+TVI + VD ++ EM
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI 298
GC P+ VT NT++ L GR +EA+++L M GC P++IT+ + L K EI
Sbjct: 63 AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122
Query: 299 LGLF---DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
F D M++ G P ++ + +LL G + + ++++ +G +PD YN +
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTM 182
Query: 356 VDALIDKGMLDMA 368
VD L G L+ A
Sbjct: 183 VDGLYKAGRLEAA 195
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 172/419 (41%), Gaps = 75/419 (17%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
FT TYN+++D L K + + ++ + ++ SS P TF I A + A
Sbjct: 172 FTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSS-PTVFTFTIAVDGLSKAGNLTGA 230
Query: 87 MGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
F+ + + G+ + V+Y L+D LC+ + A L +N G +
Sbjct: 231 YEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFA---------F 281
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
+ +L G + + + + M V ++ ++ M+ +C++ + +A +L+ MK+
Sbjct: 282 SSLLHGLCQAHRLEEAIQLLKAMP---CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKE 338
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM-GCQPSVVTCNTVIKLLCENGRVR 264
G DV+ YN +++ + + A R MR GC P+VVT +T+I+ LC GRV
Sbjct: 339 SGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVN 398
Query: 265 EA-------------------YAVLAE-MPKKG--------------------------- 277
+A YA L E + K G
Sbjct: 399 QAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHS 458
Query: 278 ----------CVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKF 324
C P ++TY+ L K R+ LGL + MIESG+ P + T+ +L
Sbjct: 459 PEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGL 518
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAK 383
+ + V+K+ E GC P+ Y+ L+D L +D A + +M G A
Sbjct: 519 CKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRAN 577
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 165/367 (44%), Gaps = 44/367 (11%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++++ L +++L+ RM N P TF ++ K + A ++
Sbjct: 73 TYNTLVNALLGQGRAKEAFSLLERMAANGCP-PELITFGLIIKGLCKEGEIEAAFRVVDE 131
Query: 93 LDEFGLKDEVS-YCNLVDALCEYKHVIEA-----QELCFGENK-----NVGFSGLVEMNK 141
+ + G +V + L+ ALCE V EA Q L G N GL + +
Sbjct: 132 MVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGR 191
Query: 142 TKIYNMILR-------------------GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ M+L+ G K EF++ M + GV + +Y
Sbjct: 192 LEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDA 251
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D +CK+GK A+ L ++ K + + A+++++ + + ++ A+++ ++ M
Sbjct: 252 LIDGLCKAGKLDIALGL---LRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQL---LKAMP 305
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLF 302
C P+VV N+++ LC+ RV EA+ + M + GC DVITY+ + L K R I +
Sbjct: 306 CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAY 365
Query: 303 DRMIE-----SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL-GCSPDEFAYNALV 356
R +E G P + T+ L++ G + + V+++M + G SP+ F Y L+
Sbjct: 366 -RHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLL 424
Query: 357 DALIDKG 363
+ L G
Sbjct: 425 EGLCKAG 431
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 9/270 (3%)
Query: 102 VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKC 161
V+Y L++ LC+ V +A F + GF V Y+ ++ G + + K
Sbjct: 2 VTYNVLINGLCKAGRVCDAFT-AFRKAIQFGFRPTV-----VTYSTVIDGLCRDNEVDKG 55
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
+ EEM RG + +Y+ ++ + G+ +A L + M G +++ + +I+
Sbjct: 56 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKG 115
Query: 222 VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
+ ++ A RV EM + G P V ++ LCE GRV EA+ ++ G PD
Sbjct: 116 LCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPD 175
Query: 282 VITYHCFFRCLEKP--REILGLFDRMI-ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWK 338
+TY+ L K E G+ +++ ES P + T+ + + + G L + +
Sbjct: 176 AVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFD 235
Query: 339 KMEELGCSPDEFAYNALVDALIDKGMLDMA 368
M + G SP+ Y+AL+D L G LD+A
Sbjct: 236 SMPQTGVSPNTVTYDALIDGLCKAGKLDIA 265
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 155/386 (40%), Gaps = 40/386 (10%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F + TY ++ L + FD + ++ M + PN T+ + A V EA
Sbjct: 644 FHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCA-PNAITYSSIVDGLCKAGRVTEA 702
Query: 87 MGTFNKL--DEFGLKDEVSYCNLVDALCEYKHVIEAQE---------------------- 122
+G F K+ DE ++Y L+D LC+ + EA E
Sbjct: 703 LGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILIN 762
Query: 123 -LCFGENKNVG---FSGLVEMN-KTKIY--NMILRGWFKMSWWGKCREFWEEMDKRGVVK 175
LC + G F G+ E K IY N ++ + + EEM G+ K
Sbjct: 763 GLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAK 822
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
+ ++ I + +C + + +AV + + + D ++YNT+I ++ S + A+ +
Sbjct: 823 NTVTHGIVIKALCGNDRIDEAVSYFHSIPEDC--RDEISYNTLITSLVASRRSEQALELL 880
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP 295
R M G P TV+ L + G A +L EM +G PD+ TY L K
Sbjct: 881 RAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKA 940
Query: 296 REI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
+++ F+ M+ ++P Y L+ F + V WK + G P Y
Sbjct: 941 KQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKAD---KVDDAWKLLRSSGIEPTITMY 997
Query: 353 NALVDALIDKGMLDMARKYDEEMFAK 378
+ +VD+L D A + EM +K
Sbjct: 998 STMVDSLCKNRGTDKALEVIREMKSK 1023
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 175/410 (42%), Gaps = 58/410 (14%)
Query: 11 WKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
+++A++F F T TY++VID L + E D L+ M + PN T+
Sbjct: 24 FRKAIQF--------GFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCA-PNAVTY 74
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENK 129
+ + EA ++ G E +++ ++ LC+ IEA E
Sbjct: 75 NTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE-IEAAFRVVDEMV 133
Query: 130 NVGFSGLVEMNKTKI------------------------------YNMILRGWFKMSWWG 159
+ GF VE++ + YN ++ G +K
Sbjct: 134 DRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLE 193
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+ + + + +++I +D + K+G A + + M + G+ + V Y+ +I
Sbjct: 194 AAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALI 253
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
+ + +D A+ + +R+ Q + ++++ LC+ R+ EA +L MP CV
Sbjct: 254 DGLCKAGKLDIALGL---LRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMP---CV 307
Query: 280 PDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVV 336
P+V+ ++ L + R E LFD M ESG + TY +LL+ + LR +
Sbjct: 308 PNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCK---LRRIPEA 364
Query: 337 WKKMEEL----GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA-KGLS 381
++ +E + GCSP+ ++ L+ L + G ++ A + E M A +G+S
Sbjct: 365 YRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGIS 414
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 89/173 (51%), Gaps = 3/173 (1%)
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+V YN +I + + V A +R+ + G +P+VVT +TVI LC + V + +L
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 272 EMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM +GC P+ +TY+ L + +E L +RM +G P++ T+ ++++ + G
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ F V +M + G PD + L+ AL + G +D A + +++ G +
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFT 173
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 147/366 (40%), Gaps = 10/366 (2%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A AL +F + D Y+++ID L K D ++ + RM IP
Sbjct: 694 CKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMI-RAGRIP 752
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELC 124
+ TF I+ A ++ + F + E G K ++ +Y +++A C K A
Sbjct: 753 DVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYC-LKGEFSAAYAL 811
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
E K G + T + ++++ + ++ + + +D SY+ +
Sbjct: 812 LEEMKTHGIA-----KNTVTHGIVIKALCGNDRIDEAVSYFHSIPED--CRDEISYNTLI 864
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ S + +A++L + M G D Y TV+ + + + A ++ +EMR G
Sbjct: 865 TSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHS 924
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDR 304
P + T +I L + ++ A EM +K PD I Y K ++ +
Sbjct: 925 PDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKL 984
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
+ SGI P + Y ++ + V ++M+ C P + +L A + +G
Sbjct: 985 LRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGR 1044
Query: 365 LDMARK 370
+D A K
Sbjct: 1045 VDEAVK 1050
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 122/301 (40%), Gaps = 43/301 (14%)
Query: 6 CYANDWKRALEFF-NWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C A LE F E C YN++I+ EF ++ L+ MK + +
Sbjct: 765 CDAGRIDTGLELFCGMAERGCK--ADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIA- 821
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELC 124
N T I+ K ++EA+ F+ + E +DE+SY L+ +L + +A EL
Sbjct: 822 KNTVTHGIVIKALCGNDRIDEAVSYFHSIPE-DCRDEISYNTLITSLVASRRSEQALELL 880
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+ G Y ++ G FK + +EM RG DL +Y+I +
Sbjct: 881 RAMVADGGSPDACN------YMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMI 934
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI----------------RAVGV---- 224
+ K+ + A ++EM +K +K D + Y+++I R+ G+
Sbjct: 935 SGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLRSSGIEPTI 994
Query: 225 ------------SEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
+ G D A+ V REM+ C+P + ++ GRV EA ++ +
Sbjct: 995 TMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVND 1054
Query: 273 M 273
+
Sbjct: 1055 L 1055
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 164/351 (46%), Gaps = 11/351 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+ +I +L + ++ +MK + P+ T+ + ++ M +N
Sbjct: 346 THTVLIQVLCDAGRISDAKDVFWKMKKSDQK-PDRVTYITLLDKFADNGESQSVMEIWNA 404
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G D V +Y ++DALC+ V EA E+ F E K G + + YN ++ G
Sbjct: 405 MKADGYNDNVVAYTAVIDALCQVGRVFEALEM-FDEMKQKGI-----VPEQYSYNSLISG 458
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K +G E ++ MD G + +++ ++++ KSG+ KA++ Y+ MK KGI D
Sbjct: 459 FLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPD 518
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
VVA N V+ + S + A RV+ E++ MG P +T +IK + + EA +
Sbjct: 519 VVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFY 578
Query: 272 EMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+M + CVPDV+ + L K E +F ++ E + P TY LL GR G
Sbjct: 579 DMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREG 638
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++ V + ++M P+ YN ++D L G ++ A M KG
Sbjct: 639 KVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKG 689
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 161/354 (45%), Gaps = 13/354 (3%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKD---NPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
Y ++ IL F + L +H +K+ P S + ++ + + + +++
Sbjct: 728 YATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFA 787
Query: 91 NKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+ G+ D+ C L+ LC+ K +EA EL + K+ G S KT YN ++
Sbjct: 788 EIIASSGITLDDFFLCPLIKHLCKQKKALEAHEL-VKKFKSFGVS-----LKTGSYNSLI 841
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G + + EM + G D +Y++ +D M KS + + +K+ +EM +KG +
Sbjct: 842 CGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYE 901
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
V YNT+I + S ++ A+ +Y + G P+ T ++ L + GR+ +A +
Sbjct: 902 STYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENL 961
Query: 270 LAEMPKKGCVPDVITYHCFF---RCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
EM + GC + Y+ R ++ LF M++ GI P + +Y +++ +
Sbjct: 962 FNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCK 1021
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G L ++++ E+G PD YN L+D L L+ A EM KG+
Sbjct: 1022 AGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGI 1075
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 122/239 (51%), Gaps = 5/239 (2%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M + G+V + ++Y+ + + KSG +A+++YK M G+ V Y+ ++ A G
Sbjct: 230 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRD 289
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
V+ + + REM G +P+V + I++L + R EAY +LAEM +GC PDVIT+
Sbjct: 290 VETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTV 349
Query: 288 FFRCLEKPREILGLFD---RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
+ L I D +M +S +P TY+ LL KF G + V +W M+ G
Sbjct: 350 LIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADG 409
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQSG 403
+ + AY A++DAL G + A + +EM KG+ P + L+ G L ++ G
Sbjct: 410 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIV--PEQYSYNSLISGFLKADRFG 466
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 157/344 (45%), Gaps = 13/344 (3%)
Query: 12 KRALEFFNWVETDCHF--THTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
K+ALE V+ F + T +YNS+I L D++ L MK+ P+ T
Sbjct: 813 KKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCG-PDEFT 871
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGEN 128
+ ++ + + E + ++ G + V+Y ++ L + + + +A +L +
Sbjct: 872 YNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYY--- 928
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
N+ G T Y +L G K + EM + G + Y+I ++
Sbjct: 929 -NLMSQGFSPTPCT--YGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHR 985
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
+G K L+++M +GI D+ +Y +I + + ++ + +R++ EMG +P ++
Sbjct: 986 IAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLI 1045
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRM 305
T N +I L ++ R+ EA ++ EM KKG VP++ TY+ L K E +++ +
Sbjct: 1046 TYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1105
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE 349
+ G +P + TY L+R + G + + +M GC P+
Sbjct: 1106 LTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNS 1149
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 139/309 (44%), Gaps = 16/309 (5%)
Query: 78 VTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCE---YKHVIEAQELCFGENKNVGF 133
V +L++ A G F ++ E G DE +Y L+DA+ + + +++ QE E G+
Sbjct: 845 VDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQE----EMHRKGY 900
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
+ YN I+ G K + + + + +G +Y +D + K+G+
Sbjct: 901 E-----STYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRI 955
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
A L+ EM + G K + YN ++ ++ + ++++M + G P + + +
Sbjct: 956 EDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTII 1015
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGI 310
I LC+ G++ + ++ + G PD+ITY+ L K + E + LF+ M + GI
Sbjct: 1016 IDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGI 1075
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
P + TY L+ G+ G +++++ G P+ F YNAL+ G D A
Sbjct: 1076 VPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYA 1135
Query: 371 YDEEMFAKG 379
M G
Sbjct: 1136 AYGRMIVGG 1144
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 149/329 (45%), Gaps = 9/329 (2%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN+++D L K + + ++++ M IP+ +++ + V NEA F +
Sbjct: 661 TYNTILDCLCKNGAVNDALDMLYSMTTK-GCIPDLSSYNTVIYGLVKEERYNEAFSIFCQ 719
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ + + D + C ++ + + + EA + K + +++ +++ + G
Sbjct: 720 MKKVLIPDYATLCTILPSFVKIGLMKEALHII----KEYFLQPGSKTDRSSCHSL-MEGI 774
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K + K EF E + G+ D + +CK K +A +L K+ K G+ +
Sbjct: 775 LKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKT 834
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
+YN++I + +D A ++ EM+E+GC P T N ++ + ++ R+ E V E
Sbjct: 835 GSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEE 894
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M +KG +TY+ L K R + + L+ ++ G P TY LL + G
Sbjct: 895 MHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGR 954
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+ ++ +M E GC + YN L++
Sbjct: 955 IEDAENLFNEMLEYGCKANCTIYNILLNG 983
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 133/288 (46%), Gaps = 11/288 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN ++D +GK + + M + T+ + V + + +A+ +
Sbjct: 871 TYNLLLDAMGKSMRIEEMLKVQEEMHRKGYE-STYVTYNTIISGLVKSRRLEQAIDLYYN 929
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
L G +Y L+D L + + +A+ L F E G IYN++L G
Sbjct: 930 LMSQGFSPTPCTYGPLLDGLLKAGRIEDAENL-FNEMLEYGCKA-----NCTIYNILLNG 983
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K +++M +G+ D+ SY+I +D +CK+G+ + ++++ + G++ D
Sbjct: 984 HRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPD 1043
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
++ YN +I +G S+ ++ A+ ++ EM++ G P++ T N++I L + G+ EA +
Sbjct: 1044 LITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYE 1103
Query: 272 EMPKKGCVPDVITYHCFFRCLE---KPREILGLFDRMIESGIRPKMDT 316
E+ KG P+V TY+ R + RMI G P T
Sbjct: 1104 ELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSST 1151
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 182/413 (44%), Gaps = 51/413 (12%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDIL---GKFFEFDLSWNLIHRMKDNPSSIPN 66
+ + +E +N ++ D + Y +VID L G+ FE + + MK +P
Sbjct: 394 ESQSVMEIWNAMKAD-GYNDNVVAYTAVIDALCQVGRVFE---ALEMFDEMKQK-GIVPE 448
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK----DEVSYCNL-------VDALCEYK 115
++ + ++ A +A+ F +D G K V + N + A+ Y+
Sbjct: 449 QYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYE 508
Query: 116 ---------HVIEAQELCFGENKNVGFSGLVEMNK--------------TKIYNMILRGW 152
V+ + FG K SG + M K T Y M+++
Sbjct: 509 LMKSKGIVPDVVAGNAVLFGLAK----SGRLGMAKRVFHELKAMGVSPDTITYTMMIKCC 564
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K S + + + + +M + V D+ + +D + K+G+ +A +++ ++K+ ++
Sbjct: 565 SKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTD 624
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
YNT++ +G V M + EM P+++T NT++ LC+NG V +A +L
Sbjct: 625 GTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYS 684
Query: 273 MPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M KGC+PD+ +Y+ L E+ E +F +M + I P T +L F + G
Sbjct: 685 MTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLI-PDYATLCTILPSFVKIGL 743
Query: 330 LRPVFVVWKK-MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
++ + K+ + G D + ++L++ ++ K + + ++ E + + G++
Sbjct: 744 MKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGIT 796
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 127/262 (48%), Gaps = 10/262 (3%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
+ T TYN++I L K + + +L + + S P T+ + + A + +A
Sbjct: 900 YESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFS-PTPCTYGPLLDGLLKAGRIEDA 958
Query: 87 MGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELC--FGENKNVGFSGLVEMNKTKI 144
FN++ E+G K + N++ L ++ +++C F + + G + + K
Sbjct: 959 ENLFNEMLEYGCKANCTIYNIL--LNGHRIAGNTEKVCHLFQDMVDQGINPDI-----KS 1011
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y +I+ K ++ ++ + G+ DL +Y++ +D + KS + +AV L+ EM+
Sbjct: 1012 YTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQ 1071
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
KKGI ++ YN++I +G + A ++Y E+ G +P+V T N +I+ +G
Sbjct: 1072 KKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTD 1131
Query: 265 EAYAVLAEMPKKGCVPDVITYH 286
AYA M GC+P+ T H
Sbjct: 1132 SAYAAYGRMIVGGCLPNSSTCH 1153
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 3/200 (1%)
Query: 173 VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM 232
VV S + +D+M G+ +++ M+++ +K +V + + +GV G+ A
Sbjct: 165 VVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAP 224
Query: 233 RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
M+E G + T N ++ L ++G REA V M G VP V TY
Sbjct: 225 VALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAF 284
Query: 293 EKPRE---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE 349
K R+ +L L M G++P + +Y + +R G+ + + +ME GC PD
Sbjct: 285 GKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDV 344
Query: 350 FAYNALVDALIDKGMLDMAR 369
+ L+ L D G + A+
Sbjct: 345 ITHTVLIQVLCDAGRISDAK 364
>gi|302753732|ref|XP_002960290.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
gi|300171229|gb|EFJ37829.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
Length = 546
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 186/373 (49%), Gaps = 13/373 (3%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
+DW+R+L +W+ + + YN V+ + + +++L+ L+ M + +P+
Sbjct: 3 DDWQRSLALHDWMIEKGGYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEK-DLVPDKF 61
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE 127
TF + Y A+ + +AMG +++ G+K D V + L++ + K +A L F +
Sbjct: 62 TFSTLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSL-FSK 120
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
K G + IYN ++ + K ++ + + EM + G++ D SY+I ++
Sbjct: 121 LKASGIA-----PDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAY 175
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM-REMGCQPS 246
+S K +A +++ EMK KGI++DV N +I G E V A ++ M + +G Q +
Sbjct: 176 AESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQN 235
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV-PDVITYHC--FFRCLEKPRE-ILGLF 302
VVT NT+IK+ E + EA+ V M KG V P+VITY+ F L E + L
Sbjct: 236 VVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLV 295
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
+M + GI P TY L+ +G+ G ++K + E G DE Y +++
Sbjct: 296 RKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERA 355
Query: 363 GMLDMARKYDEEM 375
G++ A++ EE+
Sbjct: 356 GLVAHAKRLLEEL 368
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 166/378 (43%), Gaps = 41/378 (10%)
Query: 4 LSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
L+ D+ +A F+ ++ YNS+I++ GK + + L+ MK+
Sbjct: 104 LAGKVKDYSKATSLFSKLKA-SGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKE-AGL 161
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNL-VDALCEYKHVIEAQE 122
+P+ ++ I+ Y + EA F ++ G++ +V+ CN+ +D + + V +A+E
Sbjct: 162 MPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEE 221
Query: 123 LCFGENKNVGFSGLVEMNKTKI-------------------------------YNMILRG 151
L + +K +G V T I YN IL
Sbjct: 222 LFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFL 281
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K +M +RG+ + +YS + I K+GK +A L+K +++KG +MD
Sbjct: 282 HGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMD 341
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ Y ++I + V A R+ E++ QP +V +T I +L + ++ EA +
Sbjct: 342 EILYQSMIVVYERAGLVAHAKRLLEELK----QPDIVPRDTAISILAKAEKLEEAAKLYW 397
Query: 272 EMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+ G + + +TY + ++ + + +F+ M ESG P +T V+LL +G+
Sbjct: 398 RSHEAGEIKESVTYKSMIQLFVRNKRSKNAIDVFENMRESGFLPDSETTVVLLAAYGQLR 457
Query: 329 FLRPVFVVWKKMEELGCS 346
L ++ M E GC+
Sbjct: 458 QLEDAEKLYLDMRERGCT 475
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
++++I++ GK ++ + +L ++K + + P+ + M Y A EA G ++
Sbjct: 98 FSTLIELAGKVKDYSKATSLFSKLKASGIA-PDKVIYNSMINLYGKAKFYKEAQGLLAEM 156
Query: 94 DEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
E GL D VSY L++A E + +EA++ F E K G ++++ T NM++ +
Sbjct: 157 KEAGLMPDTVSYTILINAYAESQKYLEAKQ-VFLEMKTKG----IQLDVTTC-NMMIDVY 210
Query: 153 FKMSWWGKCRE-FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG-IKM 210
K+ E FW G+ +++ +Y+ + + ++ +A ++ M+ KG ++
Sbjct: 211 GKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEP 270
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
+V+ YNT++ G++ + AMR+ R+M++ G +P+ VT +T+I + + G+ A +
Sbjct: 271 NVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLF 330
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKM---DTYVMLLRK 323
+ +KG D I Y E+ ++ R++E +P + DT + +L K
Sbjct: 331 KTLREKGFEMDEILYQSMIVVYERAG-LVAHAKRLLEELKQPDIVPRDTAISILAK 385
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 3/182 (1%)
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
++K G + AYN V++ V + + A + EM E P T +T+I R
Sbjct: 16 IEKGGYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANR 75
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE---ILGLFDRMIESGIRPKMDTYVM 319
+ +A L EM G PD++ + K ++ LF ++ SGI P Y
Sbjct: 76 LEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNS 135
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++ +G+ F + + +M+E G PD +Y L++A + A++ EM KG
Sbjct: 136 MINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMKTKG 195
Query: 380 LS 381
+
Sbjct: 196 IQ 197
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 179/417 (42%), Gaps = 53/417 (12%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + K++L F + V F +Y ++++ L K E + L+ RM ++ S+ P
Sbjct: 91 CLKGEVKKSLHFHDKVVAQ-GFQMDHVSYGTLLNGLCKIGETRCAVKLL-RMIEDRSTRP 148
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELC 124
N + + LVNEA ++++D G+ D ++Y L+ C ++ A L
Sbjct: 149 NVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLL 208
Query: 125 ---FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
+N N G IYN+++ K + + M K G+ + +YS
Sbjct: 209 DEMILKNINPG---------VYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYS 259
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
MD C G+ A +++ M + G+ +V +YN +I + + VD AM + REM
Sbjct: 260 TLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHK 319
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI--- 298
P VT N++I LC++GR+ A ++ EM +G DV+TY L K + +
Sbjct: 320 NMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKA 379
Query: 299 LGLFDRMIESGIRPKMDTYVML---LRKFGRW---------------------------- 327
LF +M E GI+P M TY L L K GR
Sbjct: 380 TALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISG 439
Query: 328 ----GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G + KME+ GC P+ + ++ +L +K D A K EM AKGL
Sbjct: 440 LCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 496
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 152/359 (42%), Gaps = 55/359 (15%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ T + K V +++ +K+ G + D VSY L++ LC+
Sbjct: 78 PDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK---------- 127
Query: 124 CFGENK-NVGFSGLVEMNKTK----IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD-- 176
GE + V ++E T+ +YN I+ G K + + + EMD RG+ D
Sbjct: 128 -IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAI 186
Query: 177 ---------------------------------LHSYSIYMDIMCKSGKPWKAVKLYKEM 203
++ Y+I ++ +CK G +A L M
Sbjct: 187 TYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVM 246
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
K+GIK VV Y+T++ + V A +++ M +MG P+V + N +I LC+ RV
Sbjct: 247 TKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRV 306
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVML 320
EA +L EM K VPD +TY+ L K I L L + M G + TY L
Sbjct: 307 DEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSL 366
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L + L ++ KM+E G P + Y AL+D L G L A++ + + KG
Sbjct: 367 LDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKG 425
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 110/243 (45%), Gaps = 5/243 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+N IL KM + ++M+ +G+ + + +I ++ C G+ + + ++
Sbjct: 13 FNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKIL 72
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K G + D + NT+++ + + V ++ + ++ G Q V+ T++ LC+ G R
Sbjct: 73 KLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETR 132
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLL 321
A +L + + P+V+ Y+ L K + E L+ M GI P TY L+
Sbjct: 133 CAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLI 192
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
F G L F + +M +P + YN L++AL +G + A+ M +G+
Sbjct: 193 YGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGI- 251
Query: 382 AKP 384
KP
Sbjct: 252 -KP 253
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 166/362 (45%), Gaps = 45/362 (12%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKR 76
FF W F + T+N VID+L K FD W ++ +K++ IP TF ++
Sbjct: 83 FFIWTTRRRSF-RSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIP-PPTFSVLIAA 140
Query: 77 YVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGL 136
Y + + +A+ +F K+ +FG K +V N + HV+ +E
Sbjct: 141 YAKSGMAEKAVESFGKMKDFGCKPDVFTYNSI------LHVMVQKE-------------- 180
Query: 137 VEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKA 196
V + +YN +L+ + + ++ I ++ +CK+GK A
Sbjct: 181 VFLLALAVYNQMLKLNYN--------------------PNRATFVILLNGLCKNGKTDDA 220
Query: 197 VKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKL 256
+K++ EM +KGI + + Y ++ + ++ D R+ M+ GC P +TCN ++
Sbjct: 221 LKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDG 280
Query: 257 LCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPK 313
C+ G++ EA+A+L K+G V + Y L + + E+ +M ++GI P
Sbjct: 281 FCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPD 340
Query: 314 MDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDE 373
+ Y +L+R F G + + M + G SPD + YNAL+ D G+LD AR
Sbjct: 341 VVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQL 400
Query: 374 EM 375
E+
Sbjct: 401 EI 402
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 111/236 (47%), Gaps = 5/236 (2%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+ EE+ + ++S+ + KSG KAV+ + +MK G K DV YN+++ +
Sbjct: 117 KILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVM 176
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
E A+ VY +M ++ P+ T ++ LC+NG+ +A + EM +KG P+
Sbjct: 177 VQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNT 236
Query: 283 ITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
+ Y L ++ ++ L + M SG P T LL F + G + F + +
Sbjct: 237 MIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQL 296
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
E+ G Y++L+D L D +++ +MF G+ +P L T L++G
Sbjct: 297 FEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGI--EPDVVLYTILIRG 350
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/420 (20%), Positives = 172/420 (40%), Gaps = 81/420 (19%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
TYNS++ ++ + F L+ + ++M K N + PN ATF I+ ++A+ F+
Sbjct: 168 TYNSILHVMVQKEVFLLALAVYNQMLKLNYN--PNRATFVILLNGLCKNGKTDDALKMFD 225
Query: 92 KLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL--------CFGENKNV-----GFSGLV 137
++ + G+ + + Y ++ LC+ K + L C ++ GF L
Sbjct: 226 EMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLG 285
Query: 138 EMNKT----------------KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
++++ K Y+ ++ G F+ + + +E+ +M K G+ D+ Y+
Sbjct: 286 QIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYT 345
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
I + C+ G A+ + +M ++G+ D YN +I+ +D A + E+ +
Sbjct: 346 ILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKN 405
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY---------------- 285
C P+ T +I +C NG + EA + +M GC P ++T+
Sbjct: 406 DCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEA 465
Query: 286 -HCFFRC----------------------------LEKPREILGLFDRMIESGIRPKMDT 316
H F++ +++ + + D+M+++G P
Sbjct: 466 RHLFYKMEIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAV 525
Query: 317 YVMLLRKFGRWGFLRPVFVVW-KKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
Y L+ R G L F +W K + L DE L + +KG L+ A + EM
Sbjct: 526 YKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETL--KLAEEHFEKGELEKAVRCLLEM 583
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 185/384 (48%), Gaps = 22/384 (5%)
Query: 5 SCYANDWKRALEFFNWVETDCHFTHTTD--TYNSVIDILGKFFEFDLSWNLIHRMKDNPS 62
SC N++ A + F+ + H + D +++S+I + + D + MK +
Sbjct: 300 SCRNNNFLEAKDIFSDM---LHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTS-G 355
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQ 121
+P++ + I+ Y +++EA+ +K+ E G D V+Y +++ LC+ K + +A
Sbjct: 356 LVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADAN 415
Query: 122 ELCFGENKNVGFSGLVEMNKTK---IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
L F +VE + ++ G K GK + M ++ + D+
Sbjct: 416 AL---------FDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIV 466
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+Y+I +D CK+ + KA +L+ EM + I + ++Y ++ V A R++ EM
Sbjct: 467 TYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEM 526
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR-- 296
G +P++VTCNTVIK C +G + +A L +M +G PD ITY+ K
Sbjct: 527 IRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYM 586
Query: 297 -EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
+ L ++M G++P + TY ++L F R G ++ ++ +KM E G PD Y L
Sbjct: 587 DKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTL 646
Query: 356 VDALIDKGMLDMARKYDEEMFAKG 379
++ + + L A ++ +EM +G
Sbjct: 647 INGYVSQDNLKEAFRFHDEMLQRG 670
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 148/319 (46%), Gaps = 10/319 (3%)
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELC 124
++ F ++ + YV A +NE TF L G ++ CN L+ L + V A E+
Sbjct: 114 DNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEV- 172
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+ E + SG +E+N + N+++ K + F +M+++G+ D+ +Y+ +
Sbjct: 173 YNE---IARSG-IELNVYTL-NIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLI 227
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ C+ G +A ++ M KG+K + YN VI + A V+ EM +G
Sbjct: 228 NAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLS 287
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGL 301
P T NT++ C N EA + ++M +G PD+I++ + + L
Sbjct: 288 PDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMY 347
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
F M SG+ P Y +L+ + R G + + KM E GC+ D AYN +++ L
Sbjct: 348 FRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCK 407
Query: 362 KGMLDMARKYDEEMFAKGL 380
K +L A +EM +G+
Sbjct: 408 KKLLADANALFDEMVERGV 426
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 162/356 (45%), Gaps = 11/356 (3%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F + + NS++ L K DL+W + + + + + N T IM H +++
Sbjct: 146 FLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIEL-NVYTLNIMVNALCKDHKIDDV 204
Query: 87 MGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
+++ G+ D V+Y L++A C + EA E+ ++ GL T Y
Sbjct: 205 KPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVM----NSMSGKGLKPTLFT--Y 258
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N ++ G K + + + + EM G+ D +Y+ + C++ +A ++ +M
Sbjct: 259 NAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLH 318
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+G+ D+++++++I + +D A+ +R+M+ G P V +I C NG + E
Sbjct: 319 RGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSE 378
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLR 322
A + +M ++GC DV+ Y+ L K + + LFD M+E G+ P T+ L+
Sbjct: 379 ALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIH 438
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+ G + ++ M + PD YN L+D ++ A + EM ++
Sbjct: 439 GHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISR 494
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 133/295 (45%), Gaps = 16/295 (5%)
Query: 115 KHVIEAQELCFGENKNVGFS------GLVEMNKT-----KIYNMILRGWFKMSWWGKCRE 163
K + +AQ L + G S L+ M+ T ++++++R + + + +
Sbjct: 77 KRLSDAQTLILRMIRRSGVSRVEIVESLISMSSTCGVDNLVFDLLIRSYVQARKLNEGTD 136
Query: 164 FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
++ + ++G + +++ + + + K G A ++Y E+ + GI+++V N ++ A+
Sbjct: 137 TFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALC 196
Query: 224 VSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVI 283
+D +M + G +VT NT+I C G + EA+ V+ M KG P +
Sbjct: 197 KDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLF 256
Query: 284 TYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
TY+ L K + G+F+ M+ G+ P TY LL + R ++ M
Sbjct: 257 TYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDM 316
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
G SPD ++++L+ G LD A Y +M GL P + T L+ G
Sbjct: 317 LHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLV--PDNVIYTILING 369
>gi|302768008|ref|XP_002967424.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
gi|300165415|gb|EFJ32023.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
Length = 546
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 186/373 (49%), Gaps = 13/373 (3%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
+DW+R+L +W+ + + YN V+ + + +++L+ L+ M + +P+
Sbjct: 3 DDWQRSLALHDWMIEKGGYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEK-DLVPDKF 61
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE 127
TF + Y A+ + +AMG +++ G+K D V + L++ + K +A L F +
Sbjct: 62 TFSTLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSL-FSK 120
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
K G + IYN ++ + K ++ + + EM + G++ D SY+I ++
Sbjct: 121 LKASGIA-----PDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAY 175
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM-REMGCQPS 246
+S K +A +++ EMK KGI++DV N +I G E V A ++ M + +G Q +
Sbjct: 176 AESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQN 235
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV-PDVITYHC--FFRCLEKPRE-ILGLF 302
VVT NT+IK+ E + EA+ V M KG V P+VITY+ F L E + L
Sbjct: 236 VVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLV 295
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
+M + GI P TY L+ +G+ G ++K + E G DE Y +++
Sbjct: 296 RKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERA 355
Query: 363 GMLDMARKYDEEM 375
G++ A++ EE+
Sbjct: 356 GLVAHAKRLLEEL 368
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 166/378 (43%), Gaps = 41/378 (10%)
Query: 4 LSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
L+ D+ +A F+ ++ YNS+I++ GK + + L+ MK+
Sbjct: 104 LAGKVKDYSKATSLFSKLKA-SGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKE-AGL 161
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNL-VDALCEYKHVIEAQE 122
+P+ ++ I+ Y + EA F ++ G++ +V+ CN+ +D + + V +A+E
Sbjct: 162 MPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEE 221
Query: 123 LCFGENKNVGFSGLVEMNKTKI-------------------------------YNMILRG 151
L + +K +G V T I YN IL
Sbjct: 222 LFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFL 281
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K +M +RG+ + +YS + I K+GK +A L+K +++KG +MD
Sbjct: 282 HGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMD 341
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ Y ++I + V A R+ E++ QP +V +T I +L + ++ EA +
Sbjct: 342 EILYQSMIVVYERAGLVAHAKRLLEELK----QPDIVPRDTAISILAKAEKLEEAAKLYW 397
Query: 272 EMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+ G + + +TY + ++ + + +F+ M ESG P +T V+LL +G+
Sbjct: 398 RSHEAGEIKESVTYKSMIQLFMRNKRSKNAIDVFENMRESGFLPDSETTVVLLAAYGQLR 457
Query: 329 FLRPVFVVWKKMEELGCS 346
L ++ M E GC+
Sbjct: 458 QLEDAEKLYLDMRERGCT 475
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
++++I++ GK ++ + +L ++K + + P+ + M Y A EA G ++
Sbjct: 98 FSTLIELAGKVKDYSKATSLFSKLKASGIA-PDKVIYNSMINLYGKAKFYKEAQGLLAEM 156
Query: 94 DEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
E GL D VSY L++A E + +EA++ F E K G ++++ T NM++ +
Sbjct: 157 KEAGLMPDTVSYTILINAYAESQKYLEAKQ-VFLEMKTKG----IQLDVTTC-NMMIDVY 210
Query: 153 FKMSWWGKCRE-FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG-IKM 210
K+ E FW G+ +++ +Y+ + + ++ +A ++ M+ KG ++
Sbjct: 211 GKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEP 270
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
+V+ YNT++ G++ + AMR+ R+M++ G +P+ VT +T+I + + G+ A +
Sbjct: 271 NVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLF 330
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKM---DTYVMLLRK 323
+ +KG D I Y E+ ++ R++E +P + DT + +L K
Sbjct: 331 KTLREKGFEMDEILYQSMIVVYERAG-LVAHAKRLLEELKQPDIVPRDTAISILAK 385
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 3/182 (1%)
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
++K G + AYN V++ V + + A + EM E P T +T+I R
Sbjct: 16 IEKGGYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANR 75
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE---ILGLFDRMIESGIRPKMDTYVM 319
+ +A L EM G PD++ + K ++ LF ++ SGI P Y
Sbjct: 76 LEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNS 135
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++ +G+ F + + +M+E G PD +Y L++A + A++ EM KG
Sbjct: 136 MINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMKTKG 195
Query: 380 LS 381
+
Sbjct: 196 IQ 197
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 176/392 (44%), Gaps = 27/392 (6%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TYNS+I L K +++L+ M + IP+ T+ + + + ++A+
Sbjct: 114 TAVTYNSLISGLCKAERASEAYDLLEEMVYS-GCIPDIFTYTTLITGFCKSKKSDDALRV 172
Query: 90 FNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
F +L G + D V+Y L+D LC+ + EA +L FG G M T YN +
Sbjct: 173 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDL-FGRMIKSGSC----MPNTVTYNSL 227
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G+ +M + E M + G D+ +Y+ M+ CK + A L +M +KG+
Sbjct: 228 ISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGL 287
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
DVV + +++ + + A+ + EMR C P+V T NT++ C ++ EA
Sbjct: 288 TPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARK 347
Query: 269 VLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ E + C P+V++++ R L + E + L + P + Y ++
Sbjct: 348 FMLE--EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLC 405
Query: 326 RWGFLRPVFVVWKKM-EELGCSPDEFAYNALVDALIDKGMLDMARKYDE----------- 373
R + V++KM EE GC P+ Y+ L+ L + GMLD AR Y E
Sbjct: 406 REKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIEKGCVPNIGTYN 465
Query: 374 ---EMFAKGLSAKPREELGTKLVQGGLDGEQS 402
+ F K + EL +VQ G G QS
Sbjct: 466 LLIDAFRKANRDEDARELLDDMVQRGFGGVQS 497
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 139/286 (48%), Gaps = 11/286 (3%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWG 159
D V+Y +L+ LC+ K +E + G+ + GF V Y ++ +
Sbjct: 10 DFVTYTSLIQGLCKVKR-LEQALIFLGKMVSKGFHPDV-----YTYTAVIHALCVENRLH 63
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+ R+F EEM R + ++ +Y++ +D +CK G+ +AV L +M+KK + V YN++I
Sbjct: 64 EARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPT-AVTYNSLI 122
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
+ +E A + EM GC P + T T+I C++ + +A V ++ +G
Sbjct: 123 SGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFR 182
Query: 280 PDVITYHCFFRCLEKP---REILGLFDRMIESG-IRPKMDTYVMLLRKFGRWGFLRPVFV 335
PDV+TY C L K +E + LF RMI+SG P TY L+ F R G +
Sbjct: 183 PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN 242
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ ++M E G SPD Y L++ LD A +M KGL+
Sbjct: 243 LLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLT 288
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 150/331 (45%), Gaps = 13/331 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +VI L + + M N + PN T+ ++ V+EA+ +K
Sbjct: 48 TYTAVIHALCVENRLHEARKFLEEMA-NRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSK 106
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ + + V+Y +L+ LC+ + EA +L + + +SG + Y ++ G+
Sbjct: 107 MRKKCVPTAVTYNSLISGLCKAERASEAYDLL----EEMVYSGCIP--DIFTYTTLITGF 160
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM-D 211
K +E++ RG D+ +YS +D +CK G+ +A+ L+ M K G M +
Sbjct: 161 CKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPN 220
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V YN++I +D AM + M E G P VVT T++ C+ R+ +AY +L
Sbjct: 221 TVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLN 280
Query: 272 EMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+M +KG PDV+T+ L + + + + M P + TY +L + R
Sbjct: 281 QMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRAN 340
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
L +EE+ C P+ ++N ++ L
Sbjct: 341 QLEEARKFM--LEEMDCPPNVVSFNIMIRGL 369
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 102/223 (45%), Gaps = 5/223 (2%)
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
D +Y+ + +CK + +A+ +M KG DV Y VI A+ V + A +
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL--- 292
EM P+VVT +I LC+ GRV EA A+L++M KK CVP +TY+ L
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLCKA 128
Query: 293 EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
E+ E L + M+ SG P + TY L+ F + V++++ G PD Y
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+ L+D L +G L A M G S P L+ G
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSG-SCMPNTVTYNSLISG 230
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 59/141 (41%), Gaps = 4/141 (2%)
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREI 298
C VT ++I+ LC+ R+ +A L +M KG PDV TY C+E + E
Sbjct: 6 SCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEA 65
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+ M + P + TY +L+ + G + + KM + C P YN+L+
Sbjct: 66 RKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISG 124
Query: 359 LIDKGMLDMARKYDEEMFAKG 379
L A EEM G
Sbjct: 125 LCKAERASEAYDLLEEMVYSG 145
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 184/398 (46%), Gaps = 20/398 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSI 64
C AN A + + ++ F+ TYN +I L D + +++ K+N
Sbjct: 137 CRANRIDSAYQVLDRMKNK-GFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCK-- 193
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P T+ I+ + + ++EAM +++ E L+ D +Y +++ +C +V A ++
Sbjct: 194 PTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQI 253
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ G++ V YN++LRG W E +M RG ++ +YS+
Sbjct: 254 -ISSISSKGYAPDV-----ITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVL 307
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ +C+ GK + V L K+MKKKG+K D Y+ +I A+ VD A+ V M GC
Sbjct: 308 ISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGC 367
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL----EKPREIL 299
P +V NT++ LC+ R EA ++ ++ + GC P+ +Y+ F L K R L
Sbjct: 368 VPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRA-L 426
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV--FVVWKKMEELGCSPDEFAYNALVD 357
G+ M++ G+ P TY L+ R G + +V +ME C P +YN ++
Sbjct: 427 GMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLL 486
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
L + A + M KG +P E T L++G
Sbjct: 487 GLCKVSRVSDAIEVLAAMVDKG--CRPNETTYTFLIEG 522
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 146/314 (46%), Gaps = 19/314 (6%)
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA-QELCFGENKNV 131
R A NE++ L G K +V C L+ L K + +A Q + EN
Sbjct: 64 LSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENH-- 121
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
G L+ YN I+ G+ + + + + M +G D+ +Y+I + +C G
Sbjct: 122 GHPDLIA------YNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRG 175
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
A++ ++ K+ K VV Y +I A + G+D AM++ EM E+ QP + T N
Sbjct: 176 MLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYN 235
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL------EKPREILGLFDRM 305
++I+ +C G V A+ +++ + KG PDVITY+ R L E E L M
Sbjct: 236 SIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYE---LMSDM 292
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
+ G + TY +L+ R G + + K M++ G PD + Y+ L+ AL +G +
Sbjct: 293 VARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRV 352
Query: 366 DMARKYDEEMFAKG 379
D+A + + M + G
Sbjct: 353 DLAIEVLDVMISDG 366
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 83/195 (42%), Gaps = 12/195 (6%)
Query: 98 LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSW 157
+ D V+Y ++ LC+ K EA + F + VG S YN + +
Sbjct: 368 VPDIVNYNTILACLCKQKRADEALSI-FEKLGEVGCSP-----NASSYNSMFSALWSTGH 421
Query: 158 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY--KEMKKKGIKMDVVAY 215
+ EM +GV D +Y+ + +C+ G +A++L EM+ K VV+Y
Sbjct: 422 KVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSY 481
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
N V+ + V A+ V M + GC+P+ T +I+ + G + +A + +
Sbjct: 482 NIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVN 541
Query: 276 KGCVPDVITYHCFFR 290
D I+ H F R
Sbjct: 542 M----DAISEHSFER 552
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 157/320 (49%), Gaps = 10/320 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PNH F I+F + ++ EAM FNK+ + GL + V+Y L+DALC+ V +A EL
Sbjct: 377 PNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDA-EL 435
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + N G + + + + +Y G + W K E + EM +G+ ++ ++
Sbjct: 436 KFNQMINEGVAPNIVVFTSLVY-----GLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTI 490
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
M +C G+ KA +L M++ G + D+++YN +IR + D A ++ M +G
Sbjct: 491 MCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGL 550
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILG 300
+P+ T NT++ C +GR+ +AY+V EM G P V+TY+ L K R E
Sbjct: 551 KPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKE 610
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L+ MI SG + + TY ++L + + +++ + D +N ++ AL+
Sbjct: 611 LYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALL 670
Query: 361 DKGMLDMARKYDEEMFAKGL 380
G + A + A GL
Sbjct: 671 KDGRKEDAMNLFATISANGL 690
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 168/399 (42%), Gaps = 52/399 (13%)
Query: 23 TDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHL 82
TD TY VID L K D + + +M D PN T+ + Y++
Sbjct: 231 TDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVR-PNIVTYTCLIHGYLSIGQ 289
Query: 83 VNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN- 140
E + ++ GL+ D +Y L+D LC+ EA++L F ++
Sbjct: 290 WKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKL---------FDSMIRKGI 340
Query: 141 --KTKIYNMILRGW-----------------------------------FKMSWWGKCRE 163
IY +IL G+ K + G+ +
Sbjct: 341 KPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMD 400
Query: 164 FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
+ +M ++G+ ++ +Y+ +D +CK G+ A + +M +G+ ++V + +++ +
Sbjct: 401 IFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLC 460
Query: 224 VSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVI 283
+ + A ++ EM G P+VV NT++ LC GRV +A ++ M + G PD+I
Sbjct: 461 TIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDII 520
Query: 284 TYHCFFR--CL-EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
+Y+ R CL K E L D M+ G++P TY LL + R G + + V+++M
Sbjct: 521 SYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEM 580
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
G +P YN ++ L A++ M G
Sbjct: 581 LSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSG 619
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 125/281 (44%), Gaps = 11/281 (3%)
Query: 107 LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE 166
L+ LC+ K V EA + +G + V YN +L+G+ + + E
Sbjct: 136 LLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVS-----YNTLLKGFCDENRAEEALELLH 190
Query: 167 EM---DKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
M R +L SY+ ++ G+ KA L+ +M +GI +VV Y VI +
Sbjct: 191 MMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLC 250
Query: 224 VSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVI 283
++ VD A V+++M + G +P++VT +I G+ +E +L EM G PD
Sbjct: 251 KAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCF 310
Query: 284 TYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
TY L K E LFD MI GI+P + Y ++L + G L + M
Sbjct: 311 TYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLM 370
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G SP+ + +N + A K M+ A +M +GLS
Sbjct: 371 VGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLS 411
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 45/255 (17%)
Query: 173 VVKDLHSYSIYMDIMCKSGK--------------PWKAVK-------------------- 198
V D+ +YSI + C+ G+ W+
Sbjct: 90 VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149
Query: 199 ---LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE---MGCQPSVVTCNT 252
L + M + G +VV+YNT+++ + A+ + M + C P++V+ NT
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNT 209
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESG 309
VI G+V +AY + +M +G P+V+TY L K + + G+F +MI+ G
Sbjct: 210 VINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKG 269
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
+RP + TY L+ + G + V + K+M G PD F Y L+D L KG AR
Sbjct: 270 VRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEAR 329
Query: 370 KYDEEMFAKGLSAKP 384
K + M KG+ KP
Sbjct: 330 KLFDSMIRKGI--KP 342
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 145/329 (44%), Gaps = 20/329 (6%)
Query: 6 CYANDWKRALE-FFNWVETDCHFTHTTDTYNSVIDIL---GKFFEFDLSWNLIHRMKDNP 61
C + W++A E FF V H +N+++ L G+ + +L+ R+ P
Sbjct: 460 CTIDKWEKAGELFFEMVNQGIH--PNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRP 517
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA 120
I +A R + +EA + + GLK +E +Y L+ C + +A
Sbjct: 518 DIISYNALIR----GHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDA 573
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+ F E + G + +V YN IL G FK + + +E + M G +++Y
Sbjct: 574 YSV-FQEMLSNGITPVV-----VTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTY 627
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+I ++ + K+ +A+K+++ + K +++D++ +N +I A+ + AM ++ +
Sbjct: 628 NIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISA 687
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL- 299
G P V T + + L E G + E + +EM K GC P+ + + R L +I
Sbjct: 688 NGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISR 747
Query: 300 --GLFDRMIESGIRPKMDTYVMLLRKFGR 326
++ E + T ML+ F R
Sbjct: 748 AGAYLSKIDEKNFSLEASTTSMLISLFSR 776
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 98/258 (37%), Gaps = 54/258 (20%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAV------GVSEGVDFAMRVYREMREMGCQ---PS 246
A+KL+ E ++A+N ++ AV G S + + + M C P
Sbjct: 34 ALKLFDEFLHHARPASIIAFNQLLAAVSSASRRGSSSTSELVVSCFNRMIRDCCSKVAPD 93
Query: 247 VVTCNTVIKLLCENGRVREAYA-------------------------------------V 269
V T + ++ C GR+ +A +
Sbjct: 94 VFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMGVL 153
Query: 270 LAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIR---PKMDTYVMLLRK 323
L M + GC P+V++Y+ + C E + E L L M + +R P + +Y ++
Sbjct: 154 LRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVING 213
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAK 383
F G + + ++ M + G P+ Y ++D L ++D A ++M KG+ +
Sbjct: 214 FFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGV--R 271
Query: 384 PREELGTKLVQGGLDGEQ 401
P T L+ G L Q
Sbjct: 272 PNIVTYTCLIHGYLSIGQ 289
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 173/386 (44%), Gaps = 34/386 (8%)
Query: 28 THTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAM 87
TH + N +I+ L + D + +++ +M P+ TF + + EA+
Sbjct: 128 THNVYSLNVLINCLCRLSHVDFAVSVMGKMF-KLGIQPDAITFNTLINGLCNEGKIKEAV 186
Query: 88 GTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEA-----------------------QEL 123
G FN++ G + V SY +++ LC+ + I A L
Sbjct: 187 GLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSL 246
Query: 124 CFGENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
C N L EM I YN IL G+ + + ++EM R V+ D
Sbjct: 247 CKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDT 306
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
+++I +D +CK G +A + + M +KG + + YN ++ + +D A++V
Sbjct: 307 VTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGI 366
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EK 294
M GC P++ + N +I C++ R+ EA +L+EM +K PD +TY + L +
Sbjct: 367 MIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGR 426
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
PRE L LF M SG+ P + Y +LL F + G L + K+M E P+ Y
Sbjct: 427 PREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTI 486
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGL 380
L+ + G L++A++ ++ A G+
Sbjct: 487 LIRGMFIAGKLEVAKELFSKLSADGI 512
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 182/418 (43%), Gaps = 51/418 (12%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C K A+ FN + H + +YN+VI+ L K ++ + +M+ N P
Sbjct: 177 CNEGKIKEAVGLFNEMVWSGHEPNVI-SYNTVINGLCKNGNTIMAVRVFRKMEQNRGK-P 234
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N T+ + LVNEA+ +++ + G+ D V+Y ++ C + EA L
Sbjct: 235 NVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRL- 293
Query: 125 FGE--NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
F E +NV M T +N+++ G K + R E M ++G + ++Y+
Sbjct: 294 FKEMVGRNV-------MPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNA 346
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
MD C + +A+K+ M KG ++ +YN +I S+ ++ A R+ EM E
Sbjct: 347 LMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKN 406
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF------------- 289
P VT +T+++ LC+ GR REA + EM G +PD++ Y
Sbjct: 407 LTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEAL 466
Query: 290 RCLE-------KPREIL------------------GLFDRMIESGIRPKMDTYVMLLRKF 324
+ L+ KP IL LF ++ GIRP + TY ++++
Sbjct: 467 KLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGL 526
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ G + ++KME+ G PD +YN ++ + A + +EM K SA
Sbjct: 527 LKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSA 584
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 136/305 (44%), Gaps = 17/305 (5%)
Query: 106 NLVDALCEYKHVIEAQELCFGENKN---------VGFSGLVEMNKTKI---YNMILRGWF 153
++ + C K + + FG N + F +V MN + L
Sbjct: 48 HITTSACTEKPSLPQKHCGFGSNTSNDISIDDALTSFYRMVRMNPRPSVVEFGKFLGSIA 107
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
K + +MD GV +++S ++ ++ +C+ AV + +M K GI+ D +
Sbjct: 108 KKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAI 167
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
+NT+I + + A+ ++ EM G +P+V++ NTVI LC+NG A V +M
Sbjct: 168 TFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKM 227
Query: 274 PKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
+ P+V+TY+ L K R E + M++ GI P + TY +L F G L
Sbjct: 228 EQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQL 287
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGT 390
++K+M PD +N LVD L +GM+ AR E M KG A+P
Sbjct: 288 NEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKG--AEPNAYTYN 345
Query: 391 KLVQG 395
L+ G
Sbjct: 346 ALMDG 350
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 127/264 (48%), Gaps = 16/264 (6%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQEL 123
PN T+ + Y + ++EA+ + G +S N L++ C+ K + EA+ L
Sbjct: 339 PNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRL 398
Query: 124 CFGENKNVGFSGLVEMNKTK---IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
S + E N T Y+ +++G ++ + ++EM G++ DL +Y
Sbjct: 399 ---------LSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAY 449
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
SI +D CK G +A+KL KEM ++ IK +++ Y +IR + ++ ++ A ++ ++
Sbjct: 450 SILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSA 509
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE--- 297
G +P + T N +IK L + G EAY +M G +PD +Y+ + + ++
Sbjct: 510 DGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSST 569
Query: 298 ILGLFDRMIESGIRPKMDTYVMLL 321
+ L D M+ T+ MLL
Sbjct: 570 AIQLIDEMVGKRFSADSSTFQMLL 593
>gi|356514535|ref|XP_003525961.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Glycine max]
Length = 317
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 135/247 (54%), Gaps = 2/247 (0%)
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
K++N+IL GW + + + W ++ + +Y+ ++ + K GK A+KL++
Sbjct: 55 KMWNVILNGWCVLGNLHETKRVWRDIVASPCKPHIFTYATFIKALTKKGKLGTALKLFRG 114
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M KG K DVV N +I A+ + + A+ ++ +M E GC+P+V T ++IK +C+ +
Sbjct: 115 MWGKGGKPDVVICNCIIDALCFKKRIPDALEIFCDMSERGCEPNVATYKSLIKYICKIQQ 174
Query: 263 VREAYAVLAEMPKK--GCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVML 320
+ + Y ++ EM KK C+P V+TY + L++P EI + +RM +G D Y M+
Sbjct: 175 MEKVYELVDEMEKKKGSCLPKVVTYCYLLKSLKEPGEICRVLERMERNGCGMNDDVYNMV 234
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
LR + +W V WK+ME G PD +Y ++ +KG + A Y EEM +KG+
Sbjct: 235 LRLYMKWDDGDGVRKTWKEMERNGWGPDRRSYTIMILENFEKGRVKDAVCYLEEMISKGM 294
Query: 381 SAKPREE 387
+PR +
Sbjct: 295 VLEPRTK 301
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 7/171 (4%)
Query: 200 YKEMKKKGI--KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLL 257
++ + KKG + D+ +N ++ V + RV+R++ C+P + T T IK L
Sbjct: 40 HQRIWKKGCCCRADIKMWNVILNGWCVLGNLHETKRVWRDIVASPCKPHIFTYATFIKAL 99
Query: 258 CENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKM 314
+ G++ A + M KG PDV+ +C L ++ + L +F M E G P +
Sbjct: 100 TKKGKLGTALKLFRGMWGKGGKPDVVICNCIIDALCFKKRIPDALEIFCDMSERGCEPNV 159
Query: 315 DTYVMLLRKFGRWGFLRPVFVVWKKMEEL--GCSPDEFAYNALVDALIDKG 363
TY L++ + + V+ + +ME+ C P Y L+ +L + G
Sbjct: 160 ATYKSLIKYICKIQQMEKVYELVDEMEKKKGSCLPKVVTYCYLLKSLKEPG 210
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 100/241 (41%), Gaps = 12/241 (4%)
Query: 40 ILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK 99
+LG E W I P I +ATF K + A+ F + G K
Sbjct: 66 VLGNLHETKRVWRDIVASPCKPH-IFTYATF---IKALTKKGKLGTALKLFRGMWGKGGK 121
Query: 100 DEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWW 158
+V CN ++DALC K + +A E+ F + G V Y +++ K+
Sbjct: 122 PDVVICNCIIDALCFKKRIPDALEI-FCDMSERGCEPNVA-----TYKSLIKYICKIQQM 175
Query: 159 GKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTV 218
K E +EM+K+ L Y ++ +P + ++ + M++ G M+ YN V
Sbjct: 176 EKVYELVDEMEKKK-GSCLPKVVTYCYLLKSLKEPGEICRVLERMERNGCGMNDDVYNMV 234
Query: 219 IRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGC 278
+R + D + ++EM G P + +I E GRV++A L EM KG
Sbjct: 235 LRLYMKWDDGDGVRKTWKEMERNGWGPDRRSYTIMILENFEKGRVKDAVCYLEEMISKGM 294
Query: 279 V 279
V
Sbjct: 295 V 295
>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
Length = 973
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 183/410 (44%), Gaps = 49/410 (11%)
Query: 12 KRALEFFNWV--ETDCH-FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
+R +E W+ E + H +Y I +LG+ FD ++ ++ +M +N P+
Sbjct: 243 RRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKM-ENEGCKPDVI 301
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNK----------------LDEFGLKDE----------- 101
T ++ + A +++A F K LD+FG +
Sbjct: 302 THTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAM 361
Query: 102 ---------VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
V+Y ++DALC+ V EA E+ F E K G + + YN ++ G+
Sbjct: 362 KADGYNDNVVAYTAVIDALCQVGRVFEALEM-FDEMKQKGI-----VPEQYSYNSLISGF 415
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K +G E ++ MD G + +++ ++++ KSG+ KA++ Y+ MK KGI DV
Sbjct: 416 LKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDV 475
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
VA N V+ + S + A RV+ E++ MG P +T +IK + + EA + +
Sbjct: 476 VAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYD 535
Query: 273 MPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M + CVPDV+ + L K E +F ++ E + P TY LL GR G
Sbjct: 536 MIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGK 595
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++ V + ++M P+ YN ++D L G ++ A M KG
Sbjct: 596 VKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKG 645
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 123/239 (51%), Gaps = 5/239 (2%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M + G+V + ++Y+ + + KSG +A+++Y+ M G+ V Y+ ++ A G
Sbjct: 186 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD 245
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
V+ + + REM G +P+V + I++L + R EAY +LA+M +GC PDVIT+
Sbjct: 246 VETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTV 305
Query: 288 FFRCLEKPREILGLFD---RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
+ L I D +M +S +P TY+ LL KFG G + V +W M+ G
Sbjct: 306 LIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADG 365
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQSG 403
+ + AY A++DAL G + A + +EM KG+ P + L+ G L ++ G
Sbjct: 366 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIV--PEQYSYNSLISGFLKADRFG 422
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 149/329 (45%), Gaps = 9/329 (2%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN+++D L K + + ++++ M IP+ +++ + V NEA F +
Sbjct: 617 TYNTILDCLCKNGAVNDALDMLYSMTTK-GCIPDLSSYNTVIYGLVKEERYNEAFSIFCQ 675
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ + + D + C ++ + + + EA + K+ + +++ +++ + G
Sbjct: 676 MKKVLIPDYATLCTILPSFVKIGLMKEALHII----KDYFLQPGSKTDRSSCHSL-MEGI 730
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K + K EF E + G+ D + +CK K +A +L K+ K G+ +
Sbjct: 731 LKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKT 790
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
YN++I + +D A ++ EM+E+GC P T N ++ + ++ R+ E V E
Sbjct: 791 GLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEE 850
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M +KG +TY+ L K R + + L+ ++ G P TY LL + G
Sbjct: 851 MHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGR 910
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+ ++ +M E GC + YN L++
Sbjct: 911 IEDAENLFNEMLEYGCKANCTIYNILLNG 939
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 183/413 (44%), Gaps = 51/413 (12%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDIL---GKFFEFDLSWNLIHRMKDNPSSIPN 66
D + +E +N ++ D + Y +VID L G+ FE + + MK +P
Sbjct: 350 DSQSVMEIWNAMKAD-GYNDNVVAYTAVIDALCQVGRVFE---ALEMFDEMKQK-GIVPE 404
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK----DEVSYCNL-------VDALCEYK 115
++ + ++ A +A+ F +D G K V + N + A+ Y+
Sbjct: 405 QYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYE 464
Query: 116 ---------HVIEAQELCFGENKNVGFSGLVEMNK--------------TKIYNMILRGW 152
V+ + FG K SG + M K T Y M+++
Sbjct: 465 LMKSKGIVPDVVAGNAVLFGLAK----SGRLGMAKRVFHELKAMGVSPDTITYTMMIKCC 520
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K S + + + + +M + V D+ + + +D + K+G+ +A +++ ++K+ ++
Sbjct: 521 SKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTD 580
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
YNT++ +G V M + EM P+++T NT++ LC+NG V +A +L
Sbjct: 581 GTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYS 640
Query: 273 MPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M KGC+PD+ +Y+ L E+ E +F +M + I P T +L F + G
Sbjct: 641 MTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLI-PDYATLCTILPSFVKIGL 699
Query: 330 LRPVFVVWKK-MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
++ + K + G D + ++L++ ++ K ++ + ++ E + + G++
Sbjct: 700 MKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGIT 752
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 3/209 (1%)
Query: 164 FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
F K V S + +++M G+ +++ M+++ +K +V + + +G
Sbjct: 112 FRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLG 171
Query: 224 VSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVI 283
V G+ A M+E G + T N ++ L ++G REA V M G VP V
Sbjct: 172 VEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVR 231
Query: 284 TYHCFFRCLEKPRE---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
TY K R+ +L L M G++P + +Y + +R G+ + + KM
Sbjct: 232 TYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKM 291
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMAR 369
E GC PD + L+ L D G + A+
Sbjct: 292 ENEGCKPDVITHTVLIQVLCDAGRISDAK 320
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 78 VTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCE---YKHVIEAQELCFGENKNVGF 133
V +L++ A G F ++ E G DE +Y L+DA+ + + +++ QE E G+
Sbjct: 801 VDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQE----EMHRKGY 856
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
+ YN I+ G K + + + + +G +Y +D + K+G+
Sbjct: 857 E-----STYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRI 911
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
A L+ EM + G K + YN ++ ++ + ++++M + G P + + +
Sbjct: 912 EDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTII 971
Query: 254 I 254
I
Sbjct: 972 I 972
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 178/379 (46%), Gaps = 13/379 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + + AL+ V+ + Y+++ID + K + +++L M S P
Sbjct: 173 CKVGETRAALDLLRRVDGNL-VQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGIS-P 230
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELC 124
N T+ + + T + +A+ FNK+ +K +V N LVD C+ + E + +
Sbjct: 231 NVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTV- 289
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F G V Y ++ G+ + K + M +RGV D+ SY+I +
Sbjct: 290 FAMMMKQGIKPNVVT-----YCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILI 344
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D CK K +A+ L+KEM K I DVV YN++I + + +A+++ EM + G
Sbjct: 345 DGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVP 404
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGL 301
P ++T ++++ LC+N +V +A A+L ++ +G P++ TY L K + +
Sbjct: 405 PDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNI 464
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
F+ ++ G ++TY +++ F G + KM++ C PD Y ++ +L D
Sbjct: 465 FEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFD 524
Query: 362 KGMLDMARKYDEEMFAKGL 380
K D A K EM +GL
Sbjct: 525 KDENDKAEKL-REMITRGL 542
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 135/288 (46%), Gaps = 17/288 (5%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENK-NVGFSGLVEMNKTKIYNMILRGWFKMSWW 158
+ +++ L+ LC + Q L F +N +GF ++++ Y ++ G K+
Sbjct: 126 NTITFTTLIKGLCLKGQI--HQALLFHDNVVAMGF----QLDQVG-YGTLIHGLCKVGET 178
Query: 159 GKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTV 218
+ +D V ++ YS +D MCK A LY EM KGI +VV Y+ +
Sbjct: 179 RAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSAL 238
Query: 219 IRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGC 278
I + A+ ++ +M +P V T N ++ C++G+++E V A M K+G
Sbjct: 239 ISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGI 298
Query: 279 VPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
P+V+TY +C + + K + IL M + G+ P + +Y +L+ F + +
Sbjct: 299 KPNVVTYCSLMDGYCLVKEVNKAKSILY---TMSQRGVNPDIQSYNILIDGFCKIKKVDE 355
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
++K+M PD YN+L+D L G + A K +EM +G+
Sbjct: 356 AMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGV 403
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 150/335 (44%), Gaps = 12/335 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PN TF + K +++A+ + + G + D+V Y L+ LC+ A +L
Sbjct: 125 PNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDL 184
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ N LV+ N +Y+ I+ G K + + EM +G+ ++ +YS
Sbjct: 185 LRRVDGN-----LVQPNVV-MYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSAL 238
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ G+ A+ L+ +M + IK DV +N ++ + V+ M + G
Sbjct: 239 ISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGI 298
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILG 300
+P+VVT +++ C V +A ++L M ++G PD+ +Y+ F ++K E +
Sbjct: 299 KPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMN 358
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
LF M I P + TY L+ + G + + +M + G PD Y++++DAL
Sbjct: 359 LFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALC 418
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+D A ++ +G+ +P T L+ G
Sbjct: 419 KNHQVDKAIALLTKLKDQGI--RPNMYTYTILIDG 451
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 97/254 (38%), Gaps = 25/254 (9%)
Query: 133 FSGLVEMNKTKI---YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
FS L+ N T +N IL K + ++M+ G+ L + +M
Sbjct: 64 FSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLM-- 121
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
G + + + T+I+ + + + A+ + + MG Q V
Sbjct: 122 -----------------GYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVG 164
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFD---RMI 306
T+I LC+ G R A +L + P+V+ Y + K + + FD M+
Sbjct: 165 YGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMV 224
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
GI P + TY L+ F G L+ ++ KM PD + +N LVD G +
Sbjct: 225 SKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMK 284
Query: 367 MARKYDEEMFAKGL 380
+ M +G+
Sbjct: 285 EGKTVFAMMMKQGI 298
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 167/366 (45%), Gaps = 10/366 (2%)
Query: 15 LEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
++FF W ++ H T TY ++I L ++ W +I M NP + +
Sbjct: 107 MQFFRWAAKRRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVV 166
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGF 133
+ A +V++A+ F ++ + +Y +++ L + EL + E G
Sbjct: 167 RMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHEL-YNEMSTEGH 225
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
T Y+ ++ + K+ + EM + G+ Y++ + + K
Sbjct: 226 C----FPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDV 281
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
A+ L++EM+ + + DV Y +IR +G + +D A + EM+ GC+P V N +
Sbjct: 282 HGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNM 341
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL----EKPREILGLFDRMIESG 309
I L + GR+ +A + EM C+P V+TY+ + L + E+ F+RM ESG
Sbjct: 342 INFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESG 401
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
I P TY +L+ F + + ++ ++M+E G P AY +L+DAL D+A
Sbjct: 402 ISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLAC 461
Query: 370 KYDEEM 375
+ +E+
Sbjct: 462 ELFQEL 467
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 179/408 (43%), Gaps = 35/408 (8%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+ + + E +N + T+ H T TY+++I K D + L++ MK+N P
Sbjct: 206 HEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQ-PT 264
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKL-DEFGLKDEVSYCNLVDALCEYKHVIEA----- 120
+ ++ + V+ A+ F ++ ++ D +Y L+ L + + EA
Sbjct: 265 TKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFY 324
Query: 121 ---QELCFGE----NKNVGFSG-----------LVEMNKTK------IYNMILRGWFKM- 155
+E C + N + F G EM + YN I++ F+
Sbjct: 325 EMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESK 384
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
S + ++E M + G+ +YSI +D CK+ + KA+ L +EM +KG AY
Sbjct: 385 SRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAY 444
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
++I A+G ++ D A +++E++E S +IK L + GR+ +A + EM K
Sbjct: 445 CSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNK 504
Query: 276 KGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
GC PDV Y+ L + E L RM E G P +++Y ++L + G
Sbjct: 505 LGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHR 564
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ M++ PD +YN ++ AL GM + A K EEM G
Sbjct: 565 AMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGF 612
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 149/331 (45%), Gaps = 10/331 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +I LGK D +++ + M+ P+ M A +++AM F +
Sbjct: 302 TYTELIRGLGKAGRIDEAYHFFYEMQREGCR-PDTVVMNNMINFLGKAGRLDDAMKLFQE 360
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + V+Y ++ AL E K F K G S + Y++++ G
Sbjct: 361 MGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGIS-----PSSFTYSILIDG 415
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K + K EEMD++G +Y +D + K+ + A +L++E+K+
Sbjct: 416 FCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSS 475
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
Y +I+ +G + +D A+ ++ EM ++GC P V N ++ L G + EA + +
Sbjct: 476 ARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMR 535
Query: 272 EMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M + GC+PD+ +Y+ L K P + + M +S +RP + +Y +L G
Sbjct: 536 RMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAG 595
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ ++M LG D Y+++++A+
Sbjct: 596 MFEEAAKLMEEMNTLGFEYDLITYSSILEAI 626
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 127/267 (47%), Gaps = 15/267 (5%)
Query: 33 TYNSVIDIL----GKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
TYN++I L + E SW RMK++ S P+ T+ I+ + + + +AM
Sbjct: 372 TYNTIIKALFESKSRASEVP-SW--FERMKESGIS-PSSFTYSILIDGFCKTNRMEKAMM 427
Query: 89 TFNKLDEFGLKD-EVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
++DE G +YC+L+DAL + K A EL +N G S ++Y +
Sbjct: 428 LLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSS------ARVYAV 481
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
+++ K ++EM+K G D+++Y+ M + ++G +A+ + M++ G
Sbjct: 482 MIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHG 541
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
D+ +YN ++ + + G AM + M++ +P VV+ NTV+ L G EA
Sbjct: 542 CIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAA 601
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEK 294
++ EM G D+ITY + K
Sbjct: 602 KLMEEMNTLGFEYDLITYSSILEAIGK 628
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 14/213 (6%)
Query: 178 HSYSIYM------DIMCKSGKPWKAVKLYKEMKKKGI-KMDVVAYNTVIRAVGVSEGVDF 230
H S YM +++ + G+ WK ++ EM + I + + V+R +G ++ V
Sbjct: 121 HDTSTYMALIRCLEVVEQYGEMWKMIQ---EMVRNPICVVTPTELSEVVRMLGNAKMVSK 177
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG-CVPDVITYHCFF 289
A+ ++ +++ CQP+ N++I +L G+ + + + EM +G C PD +TY
Sbjct: 178 AIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALI 237
Query: 290 RC---LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
L + L + M E+G++P Y ML+ F + + ++++M C
Sbjct: 238 SAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCR 297
Query: 347 PDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
PD F Y L+ L G +D A + EM +G
Sbjct: 298 PDVFTYTELIRGLGKAGRIDEAYHFFYEMQREG 330
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 126/254 (49%), Gaps = 3/254 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN I+ G K K + EM+ + +Y I MD +CK G+ +A++L EMK
Sbjct: 13 YNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMK 72
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+KG+++DVV Y+T+I +D ++ EM E G P+VV + +I C+ G R
Sbjct: 73 RKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWR 132
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLL 321
EA AVL M ++G PDV TY C L K R+ L LFD M E G P TY +L+
Sbjct: 133 EATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLI 192
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ G + F +++ M E G + +YN L+ L + G LD A K + G
Sbjct: 193 NGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNY 252
Query: 382 AKPREELGTKLVQG 395
+P ++QG
Sbjct: 253 VEPDVITFNTVIQG 266
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 171/355 (48%), Gaps = 13/355 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+YN++I+ L K + + +L+ M + S PN T+ I+ V EAM +
Sbjct: 12 SYNTIINGLCKEKRLEKAVDLLVEM-EGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGE 70
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ GL+ D V Y L+ C K ++ + F E G S V +Y+ ++ G
Sbjct: 71 MKRKGLEVDVVVYSTLISGFCS-KGCLDRGKALFDEMLEKGISPNV-----VVYSCLING 124
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K W + M +RG+ D+++Y+ + +CK G+ KA+ L+ M +KG +
Sbjct: 125 FCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPS 184
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V YN +I + + A +++ M E G + VV+ NT+I LC NG++ EA + +
Sbjct: 185 TVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFS 244
Query: 272 EMPKKG--CVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGR 326
+ + G PDVIT++ + L K + + ++D MIE G + T +L+ ++ +
Sbjct: 245 SLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIK 304
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G + +WK++ +LG P Y+ ++D ML+ A+ M GLS
Sbjct: 305 SGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLS 359
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 163/364 (44%), Gaps = 14/364 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C ++AL+ F+ + T+ +T TYN +I+ L K ++ + M + +
Sbjct: 161 CKDGRARKALDLFDLM-TEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRL- 218
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG---LKDEVSYCNLVDALCEYKHVIEAQE 122
++ + ++EAM F+ L E G D +++ ++ LC+ + +A E
Sbjct: 219 EVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVE 278
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ + F L + +++ + K K E W+ + K G+V +YS+
Sbjct: 279 IYDTMIERGSFGNLFTCH------ILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSV 332
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D CK A L+ MK G+ + YNT++ ++ ++ A R+++EM+E
Sbjct: 333 MIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESN 392
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREIL 299
C+P ++ N +I + G + A +L +M + G PD TY F L K E
Sbjct: 393 CEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAK 452
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
G FD MI SGI P Y L++ FG + V + ++M ++G D N+++ L
Sbjct: 453 GAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFL 512
Query: 360 IDKG 363
+
Sbjct: 513 CNSA 516
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 3/215 (1%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M + ++ D+ SY+ ++ +CK + KAV L EM+ + + Y ++ +
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
V+ AMR+ EM+ G + VV +T+I C G + A+ EM +KG P+V+ Y C
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120
Query: 288 FFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
K RE + M E GI+P + TY ++ + G R ++ M E G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
P YN L++ L +G + A K E M KG
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKG 215
>gi|356499705|ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Glycine max]
Length = 500
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 169/375 (45%), Gaps = 22/375 (5%)
Query: 13 RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
+ LEFF + F H++ + ++++ ILG+ F W L+ + + T +
Sbjct: 82 QTLEFFRYTGRRKGFYHSSFSLDTMLYILGRSRMFGQVWELLIEARRKDQTAITARTVMV 141
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNV 131
+ R V + + +F K + + D + L+ LC+ K + +A+ + + K+
Sbjct: 142 VLGRIAKVCSVRQTVESFRKFRKLVQEFDTNCFNALLRTLCQEKSMADARNV-YHSLKHR 200
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCRE----FWEEMDKRGVVKDLHSYSIYMDIM 187
L + +N++L GW K E F++EM + GV D+ +Y+ MD+
Sbjct: 201 FRPNL------QTFNILLSGW-------KTPEDADLFFKEMKEMGVTPDVVTYNSLMDVY 247
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
CK + KA K+ EM+ + DV+ Y +I +G+ D A V +EM+E GC P
Sbjct: 248 CKGREIEKAYKMLDEMRDQDFSPDVITYTCIIGGLGLIGQPDKARNVLKEMKEYGCYPDA 307
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDR 304
N I+ C R+ +A+ ++ EM KG P+ TY+ FFR ++ ++ R
Sbjct: 308 AAYNAAIRNFCIAKRLGDAHGLVEEMVTKGLSPNATTYNLFFRVFYWSNDLQSSWNMYQR 367
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
M+ G P + + L+R F R + W M E G + L D L D G
Sbjct: 368 MMVEGCLPNTQSCMFLIRLFRRHEKVEMALQFWGDMVEKGFGSYTLVSDVLFDLLCDMGK 427
Query: 365 LDMARKYDEEMFAKG 379
L+ A K EM KG
Sbjct: 428 LEEAEKCFLEMVEKG 442
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 84/190 (44%), Gaps = 7/190 (3%)
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
+ V+ +++ +K + D +N ++R + + + A VY ++ +P++ T N
Sbjct: 154 QTVESFRKFRKLVQEFDTNCFNALLRTLCQEKSMADARNVYHSLKHR-FRPNLQTFNI-- 210
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIR 311
LL +A EM + G PDV+TY+ K REI + D M +
Sbjct: 211 -LLSGWKTPEDADLFFKEMKEMGVTPDVVTYNSLMDVYCKGREIEKAYKMLDEMRDQDFS 269
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
P + TY ++ G G V K+M+E GC PD AYNA + L A
Sbjct: 270 PDVITYTCIIGGLGLIGQPDKARNVLKEMKEYGCYPDAAAYNAAIRNFCIAKRLGDAHGL 329
Query: 372 DEEMFAKGLS 381
EEM KGLS
Sbjct: 330 VEEMVTKGLS 339
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 119/291 (40%), Gaps = 47/291 (16%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T+ +N+++ L + + N+ H +K PN TF I+ + T +A F
Sbjct: 171 TNCFNALLRTLCQEKSMADARNVYHSLKHRFR--PNLQTFNILLSGWKTPE---DADLFF 225
Query: 91 NKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
++ E G+ D V+Y +L+D C+ + + +A ++ E ++ FS V Y I+
Sbjct: 226 KEMKEMGVTPDVVTYNSLMDVYCKGREIEKAYKM-LDEMRDQDFSPDV-----ITYTCII 279
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G + K R +EM + G D +Y+ + C + + A L +EM KG+
Sbjct: 280 GGLGLIGQPDKARNVLKEMKEYGCYPDAAAYNAAIRNFCIAKRLGDAHGLVEEMVTKGLS 339
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKL------------- 256
+ YN R S + + +Y+ M GC P+ +C +I+L
Sbjct: 340 PNATTYNLFFRVFYWSNDLQSSWNMYQRMMVEGCLPNTQSCMFLIRLFRRHEKVEMALQF 399
Query: 257 ----------------------LCENGRVREAYAVLAEMPKKGCVPDVITY 285
LC+ G++ EA EM +KG P +++
Sbjct: 400 WGDMVEKGFGSYTLVSDVLFDLLCDMGKLEEAEKCFLEMVEKGQKPSHVSF 450
>gi|259490098|ref|NP_001159276.1| uncharacterized protein LOC100304366 [Zea mays]
gi|223943161|gb|ACN25664.1| unknown [Zea mays]
gi|414590092|tpg|DAA40663.1| TPA: hypothetical protein ZEAMMB73_658820 [Zea mays]
gi|414590093|tpg|DAA40664.1| TPA: hypothetical protein ZEAMMB73_658820 [Zea mays]
Length = 535
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 190/389 (48%), Gaps = 30/389 (7%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A+ FF+ V D Y S+I +L K F L+ +L+ M++ I +
Sbjct: 118 AVAFFHHVSPSLPADSLPDLYASMIVLLAKHRHFGLARHLLDEMRERAVPISRQLILALT 177
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGL--KDEVSYCNLVDALCEYKHVIEAQELCFGENKNV 131
+RYV A + +EA F +++E+G D + +L+ AL + + EAQ L F + V
Sbjct: 178 -RRYVRAEMPSEAADLFRRMEEYGAGAPDPATLASLLAALSKKRLASEAQAL-FDSCRTV 235
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
+V +Y ++ W + + + EM + G++ ++++Y+ +D M ++G
Sbjct: 236 FTPDVV------LYTAVVHAWCRAGRLDEAERVFTEMQQSGIMPNVYTYTAVIDAMYRAG 289
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRA---VGVSEGVDFAMRVYREMREMGCQPSVV 248
+ +A +L +M G + +N ++R+ G SE V ++V+ +M+++ C+P V+
Sbjct: 290 QVPRAQELLCQMIDSGCPPNTTTFNAIMRSHVKAGRSEQV---LQVHNQMQQLRCEPDVI 346
Query: 249 TCNTVIKLLCENGR--VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG------ 300
T N +I+ C G+ + A VL +M K CVPD T++ FR L +LG
Sbjct: 347 TYNFLIETHCGKGQGNLDAALKVLDKMTAKKCVPDCHTFNPMFRLL----LVLGNIGAAH 402
Query: 301 -LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
L+++M E +P + TY LLR F + + V + K M+ G P+ Y AL++A
Sbjct: 403 KLYEKMRELQCKPNVVTYNCLLRLFNKEKSMDMVLRMKKDMDAEGIEPNMHTYAALIEAF 462
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPREEL 388
+G A +EM + S KP +++
Sbjct: 463 CGRGNWKRAHTTLKEMIEEK-SFKPSKQV 490
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 183/410 (44%), Gaps = 49/410 (11%)
Query: 12 KRALEFFNWV--ETDCH-FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
+R +E W+ E + H +Y I +LG+ FD ++ ++ +M +N P+
Sbjct: 333 RRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKM-ENEGCKPDVI 391
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNK----------------LDEFGLKDE----------- 101
T ++ + A +++A F K LD+FG +
Sbjct: 392 THTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAM 451
Query: 102 ---------VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
V+Y ++DALC+ V EA E+ F E K G + + YN ++ G+
Sbjct: 452 KADGYNDNVVAYTAVIDALCQVGRVFEALEM-FDEMKQKGI-----VPEQYSYNSLISGF 505
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K +G E ++ MD G + +++ ++++ KSG+ KA++ Y+ MK KGI DV
Sbjct: 506 LKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDV 565
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
VA N V+ + S + A RV+ E++ MG P +T +IK + + EA + +
Sbjct: 566 VAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYD 625
Query: 273 MPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M + CVPDV+ + L K E +F ++ E + P TY LL GR G
Sbjct: 626 MIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGK 685
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++ V + ++M P+ YN ++D L G ++ A M KG
Sbjct: 686 VKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKG 735
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 163/354 (46%), Gaps = 13/354 (3%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKD---NPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
Y ++ IL F + L +H +KD P S + ++ + + + + +++
Sbjct: 774 YATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFA 833
Query: 91 NKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+ G+ D+ C L+ LC+ K +EA EL + K+ G S KT +YN ++
Sbjct: 834 EIIASSGITLDDFFLCPLIKHLCKQKKALEAHEL-VKKFKSFGVS-----LKTGLYNSLI 887
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G + + EM + G D +Y++ +D M KS + + +K+ +EM +KG +
Sbjct: 888 CGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYE 947
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
V YNT+I + S ++ A+ +Y + G P+ T ++ L + GR+ +A +
Sbjct: 948 STYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENL 1007
Query: 270 LAEMPKKGCVPDVITYHCFF---RCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
EM + GC + Y+ R ++ LF M++ GI P + +Y +++ +
Sbjct: 1008 FNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCK 1067
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G L ++++ E+G PD YN L+D L L+ A EM KG+
Sbjct: 1068 AGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGI 1121
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 125/239 (52%), Gaps = 5/239 (2%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M + G+V + ++Y+ + + KSG +A+++Y+ M G+ V Y+ ++ A G
Sbjct: 276 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD 335
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
V+ + + REM G +P+V + I++L + R EAY +LA+M +GC PDVIT+
Sbjct: 336 VETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTV 395
Query: 288 FFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
+ L + + +F +M +S +P TY+ LL KFG G + V +W M+ G
Sbjct: 396 LIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADG 455
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQSG 403
+ + AY A++DAL G + A + +EM KG+ P + L+ G L ++ G
Sbjct: 456 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIV--PEQYSYNSLISGFLKADRFG 512
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 139/309 (44%), Gaps = 16/309 (5%)
Query: 78 VTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCE---YKHVIEAQELCFGENKNVGF 133
V +L++ A G F ++ E G DE +Y L+DA+ + + +++ QE E G+
Sbjct: 891 VDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQE----EMHRKGY 946
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
+ YN I+ G K + + + + +G +Y +D + K+G+
Sbjct: 947 E-----STYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRI 1001
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
A L+ EM + G K + YN ++ ++ + ++++M + G P + + +
Sbjct: 1002 EDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTII 1061
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGI 310
I LC+ G++ + ++ + G PD+ITY+ L K + E + LF+ M + GI
Sbjct: 1062 IDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGI 1121
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
P + TY L+ G+ G +++++ G P+ F YNAL+ G D A
Sbjct: 1122 VPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYA 1181
Query: 371 YDEEMFAKG 379
M G
Sbjct: 1182 AYGRMIVGG 1190
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 156/343 (45%), Gaps = 13/343 (3%)
Query: 12 KRALEFFNWVETDCHF--THTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
K+ALE V+ F + T YNS+I L D++ L MK+ P+ T
Sbjct: 859 KKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCG-PDEFT 917
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGEN 128
+ ++ + + E + ++ G + V+Y ++ L + + + +A +L +
Sbjct: 918 YNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYY--- 974
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
N+ G T Y +L G K + EM + G + Y+I ++
Sbjct: 975 -NLMSQGFSPTPCT--YGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHR 1031
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
+G K L+++M +GI D+ +Y +I + + ++ + +R++ EMG +P ++
Sbjct: 1032 IAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLI 1091
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRM 305
T N +I L ++ R+ EA ++ EM KKG VP++ TY+ L K E +++ +
Sbjct: 1092 TYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1151
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
+ G +P + TY L+R + G + + +M GC P+
Sbjct: 1152 LTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1194
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 149/329 (45%), Gaps = 9/329 (2%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN+++D L K + + ++++ M IP+ +++ + V NEA F +
Sbjct: 707 TYNTILDCLCKNGAVNDALDMLYSMTTK-GCIPDLSSYNTVIYGLVKEERYNEAFSIFCQ 765
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ + + D + C ++ + + + EA + K+ + +++ +++ + G
Sbjct: 766 MKKVLIPDYATLCTILPSFVKIGLMKEALHII----KDYFLQPGSKTDRSSCHSL-MEGI 820
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K + K EF E + G+ D + +CK K +A +L K+ K G+ +
Sbjct: 821 LKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKT 880
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
YN++I + +D A ++ EM+E+GC P T N ++ + ++ R+ E V E
Sbjct: 881 GLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEE 940
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M +KG +TY+ L K R + + L+ ++ G P TY LL + G
Sbjct: 941 MHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGR 1000
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+ ++ +M E GC + YN L++
Sbjct: 1001 IEDAENLFNEMLEYGCKANCTIYNILLNG 1029
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 183/413 (44%), Gaps = 51/413 (12%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDIL---GKFFEFDLSWNLIHRMKDNPSSIPN 66
D + +E +N ++ D + Y +VID L G+ FE + + MK +P
Sbjct: 440 DSQSVMEIWNAMKAD-GYNDNVVAYTAVIDALCQVGRVFE---ALEMFDEMKQK-GIVPE 494
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK----DEVSYCNL-------VDALCEYK 115
++ + ++ A +A+ F +D G K V + N + A+ Y+
Sbjct: 495 QYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYE 554
Query: 116 ---------HVIEAQELCFGENKNVGFSGLVEMNK--------------TKIYNMILRGW 152
V+ + FG K SG + M K T Y M+++
Sbjct: 555 LMKSKGIVPDVVAGNAVLFGLAK----SGRLGMAKRVFHELKAMGVSPDTITYTMMIKCC 610
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K S + + + + +M + V D+ + + +D + K+G+ +A +++ ++K+ ++
Sbjct: 611 SKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTD 670
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
YNT++ +G V M + EM P+++T NT++ LC+NG V +A +L
Sbjct: 671 GTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYS 730
Query: 273 MPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M KGC+PD+ +Y+ L E+ E +F +M + I P T +L F + G
Sbjct: 731 MTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLI-PDYATLCTILPSFVKIGL 789
Query: 330 LRPVFVVWKK-MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
++ + K + G D + ++L++ ++ K ++ + ++ E + + G++
Sbjct: 790 MKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGIT 842
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 3/209 (1%)
Query: 164 FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
F K V + S + +++M G+ +++ M+++ +K +V + + +G
Sbjct: 202 FRSAARKPRVAQTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLG 261
Query: 224 VSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVI 283
V G+ A M+E G + T N ++ L ++G REA V M G VP V
Sbjct: 262 VEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVR 321
Query: 284 TYHCFFRCLEKPRE---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
TY K R+ +L L M G++P + +Y + +R G+ + + KM
Sbjct: 322 TYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKM 381
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMAR 369
E GC PD + L+ L D G + A+
Sbjct: 382 ENEGCKPDVITHTVLIQVLCDAGRISDAK 410
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1080
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 183/410 (44%), Gaps = 49/410 (11%)
Query: 12 KRALEFFNWV--ETDCH-FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
+R +E W+ E + H +Y I +LG+ FD ++ ++ +M +N P+
Sbjct: 208 RRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKM-ENEGCKPDVI 266
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNK----------------LDEFGLKDE----------- 101
T ++ + A +++A F K LD+FG +
Sbjct: 267 THTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAM 326
Query: 102 ---------VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
V+Y ++DALC+ V EA E+ F E K G + + YN ++ G+
Sbjct: 327 KADGYNDNVVAYTAVIDALCQVGRVFEALEM-FDEMKQKGI-----VPEQYSYNSLISGF 380
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K +G E ++ MD G + +++ ++++ KSG+ KA++ Y+ MK KGI DV
Sbjct: 381 LKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDV 440
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
VA N V+ + S + A RV+ E++ MG P +T +IK + + EA + +
Sbjct: 441 VAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYD 500
Query: 273 MPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M + CVPDV+ + L K E +F ++ E + P TY LL GR G
Sbjct: 501 MIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGK 560
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++ V + ++M P+ YN ++D L G ++ A M KG
Sbjct: 561 VKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKG 610
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 163/354 (46%), Gaps = 13/354 (3%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKD---NPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
Y ++ IL F + L +H +KD P S + ++ + + + + +++
Sbjct: 649 YATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFA 708
Query: 91 NKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+ G+ D+ C L+ LC+ K +EA EL + K+ G S KT +YN ++
Sbjct: 709 EIIASSGITLDDFFLCPLIKHLCKQKKALEAHEL-VKKFKSFGVS-----LKTGLYNSLI 762
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G + + EM + G D +Y++ +D M KS + + +K+ +EM +KG +
Sbjct: 763 CGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYE 822
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
V YNT+I + S ++ A+ +Y + G P+ T ++ L + GR+ +A +
Sbjct: 823 STYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENL 882
Query: 270 LAEMPKKGCVPDVITYHCFF---RCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
EM + GC + Y+ R ++ LF M++ GI P + +Y +++ +
Sbjct: 883 FNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCK 942
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G L ++++ E+G PD YN L+D L L+ A EM KG+
Sbjct: 943 AGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGI 996
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 123/239 (51%), Gaps = 5/239 (2%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M + G+V + ++Y+ + + KSG +A+++Y+ M G+ V Y+ ++ A G
Sbjct: 151 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD 210
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
V+ + + REM G +P+V + I++L + R EAY +LA+M +GC PDVIT+
Sbjct: 211 VETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTV 270
Query: 288 FFRCLEKPREILGLFD---RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
+ L I D +M +S +P TY+ LL KFG G + V +W M+ G
Sbjct: 271 LIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADG 330
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQSG 403
+ + AY A++DAL G + A + +EM KG+ P + L+ G L ++ G
Sbjct: 331 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIV--PEQYSYNSLISGFLKADRFG 387
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 136/292 (46%), Gaps = 11/292 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN ++D +GK + + M + T+ + V + + +A+ +
Sbjct: 792 TYNLLLDAMGKSMRIEEMLKVQEEMHRKGYE-STYVTYNTIISGLVKSRRLEQAIDLYYN 850
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
L G +Y L+D L + + +A+ L F E G IYN++L G
Sbjct: 851 LMSQGFSPTPCTYGPLLDGLLKAGRIEDAENL-FNEMLEYGCKA-----NCTIYNILLNG 904
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K +++M +G+ D+ SY+I +D +CK+G+ + ++++ + G++ D
Sbjct: 905 HRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPD 964
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
++ YN +I +G S+ ++ A+ ++ EM++ G P++ T N++I L + G+ EA +
Sbjct: 965 LITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYE 1024
Query: 272 EMPKKGCVPDVITYHCFFRCLE---KPREILGLFDRMIESGIRPKMDTYVML 320
E+ KG P+V TY+ R + RMI G P TY+ L
Sbjct: 1025 ELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQL 1076
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 160/354 (45%), Gaps = 13/354 (3%)
Query: 12 KRALEFFNWVETDCHF--THTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
K+ALE V+ F + T YNS+I L D++ L MK+ P+ T
Sbjct: 734 KKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCG-PDEFT 792
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGEN 128
+ ++ + + E + ++ G + V+Y ++ L + + + +A +L +
Sbjct: 793 YNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYY--- 849
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
N+ G T Y +L G K + EM + G + Y+I ++
Sbjct: 850 -NLMSQGFSPTPCT--YGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHR 906
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
+G K L+++M +GI D+ +Y +I + + ++ + +R++ EMG +P ++
Sbjct: 907 IAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLI 966
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRM 305
T N +I L ++ R+ EA ++ EM KKG VP++ TY+ L K E +++ +
Sbjct: 967 TYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1026
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ G +P + TY L+R + G + + +M GC P+ Y L + L
Sbjct: 1027 LTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQLPNQL 1080
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 139/309 (44%), Gaps = 16/309 (5%)
Query: 78 VTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCE---YKHVIEAQELCFGENKNVGF 133
V +L++ A G F ++ E G DE +Y L+DA+ + + +++ QE E G+
Sbjct: 766 VDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQE----EMHRKGY 821
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
+ YN I+ G K + + + + +G +Y +D + K+G+
Sbjct: 822 E-----STYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRI 876
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
A L+ EM + G K + YN ++ ++ + ++++M + G P + + +
Sbjct: 877 EDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTII 936
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGI 310
I LC+ G++ + ++ + G PD+ITY+ L K + E + LF+ M + GI
Sbjct: 937 IDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGI 996
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
P + TY L+ G+ G +++++ G P+ F YNAL+ G D A
Sbjct: 997 VPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYA 1056
Query: 371 YDEEMFAKG 379
M G
Sbjct: 1057 AYGRMIVGG 1065
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 149/329 (45%), Gaps = 9/329 (2%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN+++D L K + + ++++ M IP+ +++ + V NEA F +
Sbjct: 582 TYNTILDCLCKNGAVNDALDMLYSMTTK-GCIPDLSSYNTVIYGLVKEERYNEAFSIFCQ 640
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ + + D + C ++ + + + EA + K+ + +++ +++ + G
Sbjct: 641 MKKVLIPDYATLCTILPSFVKIGLMKEALHII----KDYFLQPGSKTDRSSCHSL-MEGI 695
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K + K EF E + G+ D + +CK K +A +L K+ K G+ +
Sbjct: 696 LKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKT 755
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
YN++I + +D A ++ EM+E+GC P T N ++ + ++ R+ E V E
Sbjct: 756 GLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEE 815
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M +KG +TY+ L K R + + L+ ++ G P TY LL + G
Sbjct: 816 MHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGR 875
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+ ++ +M E GC + YN L++
Sbjct: 876 IEDAENLFNEMLEYGCKANCTIYNILLNG 904
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 183/413 (44%), Gaps = 51/413 (12%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDIL---GKFFEFDLSWNLIHRMKDNPSSIPN 66
D + +E +N ++ D + Y +VID L G+ FE + + MK +P
Sbjct: 315 DSQSVMEIWNAMKAD-GYNDNVVAYTAVIDALCQVGRVFE---ALEMFDEMKQK-GIVPE 369
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK----DEVSYCNL-------VDALCEYK 115
++ + ++ A +A+ F +D G K V + N + A+ Y+
Sbjct: 370 QYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYE 429
Query: 116 ---------HVIEAQELCFGENKNVGFSGLVEMNK--------------TKIYNMILRGW 152
V+ + FG K SG + M K T Y M+++
Sbjct: 430 LMKSKGIVPDVVAGNAVLFGLAK----SGRLGMAKRVFHELKAMGVSPDTITYTMMIKCC 485
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K S + + + + +M + V D+ + + +D + K+G+ +A +++ ++K+ ++
Sbjct: 486 SKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTD 545
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
YNT++ +G V M + EM P+++T NT++ LC+NG V +A +L
Sbjct: 546 GTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYS 605
Query: 273 MPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M KGC+PD+ +Y+ L E+ E +F +M + I P T +L F + G
Sbjct: 606 MTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLI-PDYATLCTILPSFVKIGL 664
Query: 330 LRPVFVVWKK-MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
++ + K + G D + ++L++ ++ K ++ + ++ E + + G++
Sbjct: 665 MKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGIT 717
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 3/209 (1%)
Query: 164 FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
F K V S + +++M G+ +++ M+++ +K +V + + +G
Sbjct: 77 FRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLG 136
Query: 224 VSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVI 283
V G+ A M+E G + T N ++ L ++G REA V M G VP V
Sbjct: 137 VEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVR 196
Query: 284 TYHCFFRCLEKPRE---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
TY K R+ +L L M G++P + +Y + +R G+ + + KM
Sbjct: 197 TYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKM 256
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMAR 369
E GC PD + L+ L D G + A+
Sbjct: 257 ENEGCKPDVITHTVLIQVLCDAGRISDAK 285
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 122/238 (51%), Gaps = 6/238 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN+++ G+ K G+ +D+ V D+ +Y+ + +C SGK +A+++ M
Sbjct: 175 YNVMISGYCK---AGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
++ DV+ Y +I A GV AM++ EMR+ GC P VVT N ++ +C+ GR+
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLL 321
EA L +MP GC P+VIT++ R + + L M+ G P + T+ +L+
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R G L + +KM + GC P+ +YN L+ + +D A +Y E M ++G
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 176/394 (44%), Gaps = 17/394 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A + AL + + TYN+++ L + + ++ RM P
Sbjct: 183 CKAGEINNALSVLDRMSVSPDVV----TYNTILRSLCDSGKLKQAMEVLDRMLQR-DCYP 237
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ I+ + V AM +++ + G D V+Y LV+ +C+ + EA +
Sbjct: 238 DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
++ SG +N+ILR W + +M ++G + +++I +
Sbjct: 298 ----NDMPSSGC--QPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ +C+ G +A+ + ++M + G + + ++YN ++ + +D A+ M GC
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGL 301
P +VT NT++ LC++G+V +A +L ++ KGC P +ITY+ L K + + L
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
D M ++P TY L+ R G + + + E +G P+ +N+++ L
Sbjct: 472 LDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531
Query: 362 KGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
D A + M +G KP E T L++G
Sbjct: 532 SRQTDRAIDFLVFMINRG--CKPNETSYTILIEG 563
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 6/222 (2%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+F E M G V D+ + + C+ GK KA K+ + ++ G DV+ YN +I
Sbjct: 123 KFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGY 182
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
+ ++ A+ V + M P VVT NT+++ LC++G++++A VL M ++ C PDV
Sbjct: 183 CKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDV 239
Query: 283 ITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
ITY + + + L D M + G P + TY +L+ + G L
Sbjct: 240 ITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLND 299
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
M GC P+ +N ++ ++ G A K +M KG S
Sbjct: 300 MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 119/252 (47%), Gaps = 8/252 (3%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F+ + T+N +I+ L + + +++ +M + PN ++ + + ++ A
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQ-PNSLSYNPLLHGFCKEKKMDRA 398
Query: 87 MGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
+ ++ G D V+Y ++ ALC+ V +A E+ + + G S ++ Y
Sbjct: 399 IEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI-LNQLSSKGCSPVL-----ITY 452
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N ++ G K GK + +EM + + D +YS + + + GK +A+K + E ++
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFER 512
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
GI+ + V +N+++ + S D A+ M GC+P+ + +I+ L G +E
Sbjct: 513 MGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKE 572
Query: 266 AYAVLAEMPKKG 277
A +L E+ KG
Sbjct: 573 ALELLNELCNKG 584
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 10/165 (6%)
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
++R + EG F M G P ++ C T+I+ C G+ R+A +L + G
Sbjct: 112 MVRTGELEEGFKF----LENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSG 167
Query: 278 CVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
VPDVITY+ K EI L + DRM + P + TY +LR G L+
Sbjct: 168 AVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAM 224
Query: 335 VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
V +M + C PD Y L++A + A K +EM +G
Sbjct: 225 EVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRG 269
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 163/364 (44%), Gaps = 25/364 (6%)
Query: 28 THTTDTYNSVIDILGKFFEFDLS---WNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVN 84
THT + N +I+ L + D + W + ++ P I TF + +
Sbjct: 125 THTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVI----TFTTLINGVCNEGKIK 180
Query: 85 EAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK 143
A+ +N++ G + D +SY L++ LC + N V +E N K
Sbjct: 181 VAVELYNEMVRSGHEPDVISYNTLINGLCNSGNT----------NMAVHVFKKMEQNGCK 230
Query: 144 ----IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKL 199
YN I+ K +F EM RG+ D +Y+ + +C G+ +A +L
Sbjct: 231 PNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRL 290
Query: 200 YKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCE 259
+K M++ G K DVV YN +I ++ V+ A EM + G P VVT T++ LC
Sbjct: 291 FKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCY 350
Query: 260 NGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDT 316
G++ EA + +M +KGC PDV+ Y+ L K R + + M++ GI P T
Sbjct: 351 LGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVT 410
Query: 317 YVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
Y +L F G L ++K+M P+ ++ LVD L +GM+ AR E M
Sbjct: 411 YSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMT 470
Query: 377 AKGL 380
KG+
Sbjct: 471 EKGV 474
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 174/357 (48%), Gaps = 11/357 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN +ID L K + + + + M D P+ T+ + +NEA+ F K
Sbjct: 305 TYNIIIDSLYKDRLVNDAADFLSEMVDQGIP-PDVVTYTTILHGLCYLGQLNEAIRLFKK 363
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+++ G K D V+Y ++D+LC+ + V +A E E + G Y+ IL G
Sbjct: 364 MEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEF-LSEMVDRGIPP-----NAVTYSTILHG 417
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + + + ++EM R V+ + ++SI +D +C+ G +A +++ M +KG++ +
Sbjct: 418 FCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPN 477
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ YN ++ + ++ A +V+ M GC P + + N +I C + R+ +A A+L
Sbjct: 478 IYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLT 537
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+M K P+ +TY+ + L +L LF +M SG+ P + TY +LL + G
Sbjct: 538 QMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHG 597
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
L ++K M+E PD Y L++ + G L++A+ ++ A G+ R
Sbjct: 598 HLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGR 654
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 115/230 (50%), Gaps = 3/230 (1%)
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
KM + +MD GV ++S +I ++ +C+ AV ++ +M K GI+ DV+
Sbjct: 105 KMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVI 164
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
+ T+I V + A+ +Y EM G +P V++ NT+I LC +G A V +M
Sbjct: 165 TFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKM 224
Query: 274 PKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
+ GC P+V+TY+ L K R + + M+ GI P TY ++ G L
Sbjct: 225 EQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQL 284
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
++K+ME+ GC PD YN ++D+L +++ A + EM +G+
Sbjct: 285 NEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGI 334
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 154/339 (45%), Gaps = 14/339 (4%)
Query: 6 CYANDWKRALEFFNWVETD-CHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
CY A+ F +E C YN++ID L K + + + M D
Sbjct: 349 CYLGQLNEAIRLFKKMEQKGCK--PDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIP- 405
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKL-DEFGLKDEVSYCNLVDALCEYKHVIEAQEL 123
PN T+ + + ++EA F ++ + + +++ LVD LC+ V EA+ +
Sbjct: 406 PNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWV 465
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F G VE N YN ++ G+ + R+ +E M +G DLHSY+I
Sbjct: 466 -FETMTEKG----VEPN-IYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNIL 519
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
++ C S + KA L +M K + + V YNT+++ + + A ++++M G
Sbjct: 520 INGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGM 579
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILG 300
P+++T + ++ LC++G + EA + M +K PD+I Y + K G
Sbjct: 580 LPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKG 639
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
LF ++ GI+P TY ++++ + G + +++K
Sbjct: 640 LFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRK 678
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 3/188 (1%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A+ + M + + +V + + ++ + + + +M G +V + N +I
Sbjct: 77 ALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILIN 136
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRP 312
LC V A +V +M K G PDVIT+ C E K + + L++ M+ SG P
Sbjct: 137 CLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEP 196
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
+ +Y L+ G V+KKME+ GC P+ YN ++D+L +++ A +
Sbjct: 197 DVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFL 256
Query: 373 EEMFAKGL 380
EM +G+
Sbjct: 257 SEMVGRGI 264
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ ++ I+ Y + +++A ++ L + V+Y ++ LC +++AQEL
Sbjct: 511 PDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQEL 570
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
K + SG++ T Y+++L G K + + ++ M ++ + D+ Y+I
Sbjct: 571 F----KKMCSSGMLPTLMT--YSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTIL 624
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV-DFAMRVYREMREM 241
++ M GK A L+ ++ GI+ YN +I+ + + EG+ D A ++R+ + M
Sbjct: 625 IEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGL-LKEGLSDEAYELFRKWKMM 682
>gi|15239018|ref|NP_196692.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174149|sp|Q9LFM6.1|PP375_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g11310, mitochondrial; Flags: Precursor
gi|8953393|emb|CAB96666.1| putative protein [Arabidopsis thaliana]
gi|110738090|dbj|BAF00978.1| hypothetical protein [Arabidopsis thaliana]
gi|332004275|gb|AED91658.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 179/369 (48%), Gaps = 29/369 (7%)
Query: 18 FNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLI-HRMK-DNPSSIPNHATFRIMFK 75
F W E FT + ++SV++ L K EF+++W+L+ R++ D S++ + TF ++ +
Sbjct: 122 FKWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIR 181
Query: 76 RYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN----------LVDALCEYKHVIEAQELCF 125
RY A +V +A+ F EF E C L+DALC+ HV EA
Sbjct: 182 RYARAGMVQQAIRAF----EFARSYE-PVCKSATELRLLEVLLDALCKEGHVREASMYL- 235
Query: 126 GENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ +G G ++ N +I+N++L GWF+ + + WEEM V + +Y
Sbjct: 236 ---ERIG--GTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGT 290
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ C+ + A+++ +EMK ++++ + +N +I +G + + A+ +
Sbjct: 291 LIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCE 350
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE---KPREIL 299
P++VT N+++K C+ G + A +L M +G P TY+ FF+ K E +
Sbjct: 351 SGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGM 410
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
L+ ++IE+G P TY ++L+ G L V K+M+ G PD L+ L
Sbjct: 411 NLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLL 470
Query: 360 IDKGMLDMA 368
ML+ A
Sbjct: 471 CRLEMLEEA 479
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 184/395 (46%), Gaps = 18/395 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A D ALE +++ F T+ +I + + D + + + M +P
Sbjct: 123 CNAGDLHAALELLEEMKS-AGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDP---- 177
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELC 124
N T+ + + A + EAM ++ E G V+Y LVDALC+ V AQ++
Sbjct: 178 NVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDV- 236
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+ GF+ V +N ++ G+ K R+ M +G+ ++ +YS +
Sbjct: 237 VKKMIEGGFAPNV-----MTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALI 291
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D +CKS K +A ++ +EMK +G+ D Y+ +I + ++ ++ A ++ R M GC
Sbjct: 292 DGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCT 351
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--C-LEKPREILGL 301
P VV +++I C++G++ EA L EM K+ PDV+TY+ C L K E +
Sbjct: 352 PDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVI 411
Query: 302 FDRMIESG-IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
++M ESG + P + TY ++ + L + +M + GC+PD Y ++D L
Sbjct: 412 LEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLC 471
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
G L+ A + M G + P T L+ G
Sbjct: 472 KCGRLEEAEYLLQGMKRAGCA--PNVVTYTTLISG 504
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 182/380 (47%), Gaps = 39/380 (10%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN ++D L K + +++ +M + + PN TF + + V++A
Sbjct: 216 TYNVLVDALCKLSMVGAAQDVVKKMIEGGFA-PNVMTFNSLVDGFCKRGNVDDARKLLGI 274
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFS-----------GLVEMN 140
+ G++ + V+Y L+D LC+ + +EA+E+ E K G + GL + +
Sbjct: 275 MVAKGMRPNVVTYSALIDGLCKSQKFLEAKEV-LEEMKTRGVTPDAFTYSALIHGLCKAD 333
Query: 141 KTK-------------------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
K + +Y+ I+ + K + ++ +EM K+ D+ +Y+
Sbjct: 334 KIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYN 393
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKG-IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+D +CK GK +A + ++M++ G + DVV Y+TVI + S+ + A ++ M +
Sbjct: 394 TVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCK 453
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---E 297
GC P VVT T+I LC+ GR+ EA +L M + GC P+V+TY L K R E
Sbjct: 454 AGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDE 513
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE--LGCSPDEFAYNAL 355
+ + M +G P + TY ++ G ++ + ++M++ CSPD Y +
Sbjct: 514 AERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTI 573
Query: 356 VDALIDKGMLDMARKYDEEM 375
V+AL+ ++ A + E+M
Sbjct: 574 VNALMSSDLVQEAEQLLEQM 593
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 167/377 (44%), Gaps = 19/377 (5%)
Query: 10 DWKRALEFFNWVETDCH-FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
D K AL FF W F+HT ++NS++ +L + + + +L R + S P+
Sbjct: 55 DAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLF-RSELLASCEPDVC 113
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQE--LCF 125
++ I+ + A ++ A+ ++ G D ++ ++ A+ + A +
Sbjct: 114 SYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM 173
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
G + NV Y ++ + + + + EEM +RG +L +Y++ +D
Sbjct: 174 GCDPNV-----------VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVD 222
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
+CK A + K+M + G +V+ +N+++ VD A ++ M G +P
Sbjct: 223 ALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRP 282
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLF 302
+VVT + +I LC++ + EA VL EM +G PD TY L +K E +
Sbjct: 283 NVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQML 342
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
RM SG P + Y ++ F + G L ++M + SPD YN ++D L
Sbjct: 343 RRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKL 402
Query: 363 GMLDMARKYDEEMFAKG 379
G + A+ E+M G
Sbjct: 403 GKIAEAQVILEQMQESG 419
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 6/209 (2%)
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
D+ SY+I + C +G A++L +EMK G D + +I A+ + +D AM
Sbjct: 111 DVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAM--- 167
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP 295
+R MGC P+VVT +I ++ EA +L EM ++GC P+++TY+ L K
Sbjct: 168 DHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKL 227
Query: 296 REILGLFD---RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
+ D +MIE G P + T+ L+ F + G + + M G P+ Y
Sbjct: 228 SMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTY 287
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKGLS 381
+AL+D L A++ EEM +G++
Sbjct: 288 SALIDGLCKSQKFLEAKEVLEEMKTRGVT 316
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 101/234 (43%), Gaps = 8/234 (3%)
Query: 165 WEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGV 224
W G S++ + ++ + K +A L++ + DV +YN VI
Sbjct: 65 WAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCN 124
Query: 225 SEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
+ + A+ + EM+ G P T +I + G + A L M GC P+V+T
Sbjct: 125 AGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVT 181
Query: 285 YHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKME 341
Y + + E + L + M E G P + TY +L+ + + V KKM
Sbjct: 182 YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 241
Query: 342 ELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
E G +P+ +N+LVD +G +D ARK M AKG+ +P + L+ G
Sbjct: 242 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGM--RPNVVTYSALIDG 293
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 169/362 (46%), Gaps = 12/362 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A + A F ++ D T T++S+ID LGK D +++L +M D +P
Sbjct: 450 CKAQKLEEACSIFEGMD-DKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDC-GHVP 507
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNL-VDALCEYKHVIEAQELC 124
+ + + + + + ++ G +++ N +D + + + + L
Sbjct: 508 GAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRAL- 566
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F E GF + + Y++++ G K + E + M ++G V D H+Y+ +
Sbjct: 567 FREINAHGF-----IPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVI 621
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D CKSGK KA +L +EMK KG VV Y +VI + + +D A ++ E + G +
Sbjct: 622 DGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIK 681
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGL 301
+VV +++I + GR+ EAY ++ E+ +KG P+V T++C L K EI L
Sbjct: 682 LNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALIC 741
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
F M + P TY +L+ R FV W++M++LG P+ Y ++ L
Sbjct: 742 FQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAK 801
Query: 362 KG 363
G
Sbjct: 802 AG 803
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 170/394 (43%), Gaps = 65/394 (16%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN ID GK + D+SW H MK + +P+ T+ M A+ ++EA+ F +L
Sbjct: 268 YNVCIDCFGKAGKVDMSWKFFHEMKSH-GLMPDDVTYTSMIGVLCKANRLDEAVELFEQL 326
Query: 94 DEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFS---GLVEMNKTK------- 143
++ +V C Y + + G F GL+E K K
Sbjct: 327 EQ---NRKVP--------CAYAY----NTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVI 371
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
YN IL K + +EEM KR V ++ +Y+I +D++C+ GK A+++ +M
Sbjct: 372 AYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALEIRDDM 430
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
++ G+ +V+ N +I + ++ ++ A ++ M + C P+ VT +++I L + GRV
Sbjct: 431 ERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRV 490
Query: 264 REAYA-----------------------------------VLAEMPKKGCVPDVITYHCF 288
+AY+ + EM GC PD+ + +
Sbjct: 491 DDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTY 550
Query: 289 FRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
C+ K E LF + G P +Y +L+ + G + ++ M+E GC
Sbjct: 551 MDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGC 610
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
D AYNA++D G ++ A + EEM KG
Sbjct: 611 VLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKG 644
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 160/363 (44%), Gaps = 12/363 (3%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D A+ +F W E H + YNS++ ++ + EFD ++ M + ++ +
Sbjct: 104 DANTAVNYFQWAEKQTEKVHCPEAYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNIS 163
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGEN 128
++ V + + EA + +F + S Y L+ AL E + + + F +
Sbjct: 164 IELV-ANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREP-DPMLILFHQM 221
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
+ +G+ E+N ++ ++R + + +EM + D+ Y++ +D
Sbjct: 222 QELGY----EVN-VHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFG 276
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
K+GK + K + EMK G+ D V Y ++I + + +D A+ ++ ++ + P
Sbjct: 277 KAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAY 336
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRM 305
NT+I G+ EAY +L KG +P VI Y+C CL K R E L +F+ M
Sbjct: 337 AYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM 396
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
+ P + TY +L+ R G L + ME G P+ N ++D L L
Sbjct: 397 KRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKL 455
Query: 366 DMA 368
+ A
Sbjct: 456 EEA 458
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 139/309 (44%), Gaps = 10/309 (3%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQE 122
IP+ ++ I+ V A L NE F + E G + D +Y ++D C+ V +A +
Sbjct: 576 IPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQ 635
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L E K G V Y ++ G K+ + +EE G+ ++ YS
Sbjct: 636 L-LEEMKVKGHPPTV-----VTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSS 689
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D K G+ +A + +E+ +KG+ +V +N ++ A+ +E ++ A+ ++ M+++
Sbjct: 690 LIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLK 749
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL--- 299
C P+ +T + +I LC + +A+ EM K G P+ ITY L K IL
Sbjct: 750 CPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEAS 809
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
GLF R +G P +Y ++ + ++++ GC+ L+DAL
Sbjct: 810 GLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDAL 869
Query: 360 IDKGMLDMA 368
L+ A
Sbjct: 870 HKAECLEQA 878
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 3/170 (1%)
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
AYN+++ + + D R+ EM G PS ++ ++ ++REA+ ++ M
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTM 186
Query: 274 PKKGCVPDVITYHCFFRCLEKPRE---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
K P Y L + RE +L LF +M E G + + L+R F R G +
Sbjct: 187 RKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRV 246
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ +M+ D YN +D G +DM+ K+ EM + GL
Sbjct: 247 DAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGL 296
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 3/135 (2%)
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDV-ITYHCFFRCLE--KPREILGLFDRMIE 307
N+++ ++ N +L EM G P I+ C++ K RE + M +
Sbjct: 129 NSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRK 188
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
RP Y +L+ P+ +++ +M+ELG + + L+ +G +D
Sbjct: 189 FKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDA 248
Query: 368 ARKYDEEMFAKGLSA 382
A +EM + L A
Sbjct: 249 ALSLLDEMKSNSLDA 263
>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
Length = 486
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 162/353 (45%), Gaps = 13/353 (3%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSIPNH 67
D A+E F F H+ TY+++I LG+ +F LI +M KD P
Sbjct: 111 TDALLAMEIFEVASRQPGFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTP-- 168
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFG 126
F + + Y + NEA+ F+++ EFG + + N L+ L E+K + A L F
Sbjct: 169 GLFVDIIEIYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSL-FK 227
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
+ G S T+ YN+++R + +M K+G + D+ +YSI M
Sbjct: 228 KLHEFGISP-----NTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQG 282
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+C+ + A+ + EM KG D + YNT++ ++ + A R+ +M+ MGC P
Sbjct: 283 LCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPD 342
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFD 303
V+ NTVI C GR +A +L +MP+ GC+P+ ++Y L K E +
Sbjct: 343 VINYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVE 402
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
MI +G P + Y +L+ G + V M + +P E ++ L+
Sbjct: 403 EMISNGFIPHISIYHLLITGLCNEGKVGEACEVLVMMTKQTLAPHESTWSVLL 455
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 96/188 (51%), Gaps = 3/188 (1%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A+ L+K++ + GI + YN +IRA S+ + A ++ +M + GC P V T + +++
Sbjct: 222 ALSLFKKLHEFGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQ 281
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRP 312
LC +V+ A VL EM KG VPD +TY+ L + RE L +M G P
Sbjct: 282 GLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNP 341
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
+ Y ++ F R G + + M E GC P+ +Y LV+ L ++G D A+ +
Sbjct: 342 DVINYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFV 401
Query: 373 EEMFAKGL 380
EEM + G
Sbjct: 402 EEMISNGF 409
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 18/176 (10%)
Query: 230 FAMRVYR-EMREMGCQPSVVTCNTVIKLLCENGRVRE---AYAVLAEMPKKGC--VP--- 280
AM ++ R+ G + S T +T L+C+ GR R+ ++ +M K GC P
Sbjct: 115 LAMEIFEVASRQPGFKHSYSTYHT---LICKLGRARQFKTMEGLIQQMRKDGCPYTPGLF 171
Query: 281 -DVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
D+I + + P E + F +M+E G P + +LL L ++KK
Sbjct: 172 VDIIE---IYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKK 228
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+ E G SP+ YN L+ A L A +M +G P E + L+QG
Sbjct: 229 LHEFGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQG--CIPDVETYSILMQG 282
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 169/362 (46%), Gaps = 12/362 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A + A F ++ D T T++S+ID LGK D +++L +M D +P
Sbjct: 205 CKAQKLEEACSIFEGMD-DKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLD-CGHVP 262
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNL-VDALCEYKHVIEAQELC 124
+ + + + + + ++ G +++ N +D + + + + L
Sbjct: 263 GAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRAL- 321
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F E GF + + Y++++ G K + E + M ++G V D H+Y+ +
Sbjct: 322 FREINAHGF-----IPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVI 376
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D CKSGK KA +L +EMK KG VV Y +VI + + +D A ++ E + G +
Sbjct: 377 DGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIK 436
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGL 301
+VV +++I + GR+ EAY ++ E+ +KG P+V T++C L K EI L
Sbjct: 437 LNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALIC 496
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
F M + P TY +L+ R FV W++M++LG P+ Y ++ L
Sbjct: 497 FQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAK 556
Query: 362 KG 363
G
Sbjct: 557 AG 558
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 160/381 (41%), Gaps = 54/381 (14%)
Query: 6 CYANDWKRALEFFNWVETD----CHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
C AN A+E F +E + C + YN++I G +FD ++ L+ R K
Sbjct: 66 CKANRLDEAVELFEQLEQNRKVPCAYA-----YNTMIMGYGSAGKFDEAYGLLERQKAK- 119
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQ 121
SIP+ + + V EA+ F ++ + + +Y L+D LC + A
Sbjct: 120 GSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAAL 179
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
E+ ++M++ G+ ++ + +
Sbjct: 180 EI-----------------------------------------RDDMERAGLFPNVLTVN 198
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
I +D +CK+ K +A +++ M K + V ++++I +G VD A +Y +M +
Sbjct: 199 IMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDC 258
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI--- 298
G P + ++I+ + GR + + + EM GC PD+ + + C+ K E
Sbjct: 259 GHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKG 318
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
LF + G P +Y +L+ + G + ++ M+E GC D AYNA++D
Sbjct: 319 RALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDG 378
Query: 359 LIDKGMLDMARKYDEEMFAKG 379
G ++ A + EEM KG
Sbjct: 379 FCKSGKVNKAYQLLEEMKVKG 399
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 139/309 (44%), Gaps = 10/309 (3%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQE 122
IP+ ++ I+ V A L NE F + E G + D +Y ++D C+ V +A +
Sbjct: 331 IPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQ 390
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L E K G V Y ++ G K+ + +EE G+ ++ YS
Sbjct: 391 L-LEEMKVKGHPPTV-----VTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSS 444
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D K G+ +A + +E+ +KG+ +V +N ++ A+ +E ++ A+ ++ M+++
Sbjct: 445 LIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLK 504
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL--- 299
C P+ +T + +I LC + +A+ EM K G P+ ITY L K IL
Sbjct: 505 CPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEAS 564
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
GLF R +G P +Y ++ + ++++ GC+ L+DAL
Sbjct: 565 GLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDAL 624
Query: 360 IDKGMLDMA 368
L+ A
Sbjct: 625 HKAECLEQA 633
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 129/299 (43%), Gaps = 41/299 (13%)
Query: 143 KIYNMILRGWF--KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
K+ M+L W K + + E +E++++ V ++Y+ + +GK +A L
Sbjct: 54 KVGLMLLFPWVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLL 113
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR--------------EMGCQ-- 244
+ K KG V+AYN ++ +G V+ A+R++ EM+ +M C+
Sbjct: 114 ERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREG 173
Query: 245 ------------------PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
P+V+T N +I LC+ ++ EA ++ M K C P+ +T+
Sbjct: 174 KLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFS 233
Query: 287 CFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
L K + L+++M++ G P Y L+R F + G ++K+M
Sbjct: 234 SLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHT 293
Query: 344 GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL--SAKPREELGTKLVQGGLDGE 400
GCSPD N +D + G + R E+ A G A+ L LV+ GL E
Sbjct: 294 GCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANE 352
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 175/381 (45%), Gaps = 34/381 (8%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGK----FFEFDLSWNLIHRMKDNPSSIPNHAT 69
A++FF+W + H +YN ++DIL K F + +L+H PN T
Sbjct: 10 AIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLH-----SGCSPNLVT 64
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGEN 128
F+I+ + A A+ LDEF + +V N L+ L +K Q + EN
Sbjct: 65 FKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGL--FKDGNPDQAVKLFEN 122
Query: 129 KNVGFSGLVEMNKTK----IYNMILRGWFKMSWWGKCREFWEEMDKRG--VVKDLHSYSI 182
+E ++ K YN ++ G K K RE EEM ++G D+ +Y+
Sbjct: 123 --------MESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNT 174
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ ++ + +A ++MK GI DV+ N ++ + V+ A+ + M+ G
Sbjct: 175 LINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAG 234
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK----PREI 298
P V+T N++I LC G+V EA +L M C PD++T++ K PR
Sbjct: 235 PVPDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRA- 290
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
L + + M I P + TY +L+ R G ++ F + +++ G PD AY +LVD
Sbjct: 291 LEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDG 350
Query: 359 LIDKGMLDMARKYDEEMFAKG 379
L G ++ A K +EM +G
Sbjct: 351 LCKSGEIEEAHKLVKEMSVRG 371
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 158/355 (44%), Gaps = 20/355 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
TYN+VI L K + + L+ M + S P+ T+ + + A + EA
Sbjct: 134 TYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFRE 193
Query: 92 KLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
K+ G+ +V CN LV +C+ V EA E+ G + +G V YN I+
Sbjct: 194 KMKAAGINPDVLTCNILVSGICKDGDVEEALEILDG----MKLAGPVP--DVITYNSIIH 247
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
+ GK E E + DL +++ +D CK+G +A+++ +EM ++ I
Sbjct: 248 A---LCVAGKVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILP 304
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
DV+ Y ++ + V A + E+ G P V+ +++ LC++G + EA+ ++
Sbjct: 305 DVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLV 364
Query: 271 AEMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
EM +GC V+ Y +C + K REIL M+ + P + TY ++L
Sbjct: 365 KEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILA---EMVSINMVPPLFTYNIVLGGL 421
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ G + + + G PD YN L+D L + A +EM ++G
Sbjct: 422 IKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRG 476
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 157/349 (44%), Gaps = 42/349 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
T+N+++D K + ++ M ++N +P+ T+ I+ V A
Sbjct: 273 TFNTLLDGFCKAGMLPRALEVLEEMCREN--ILPDVITYTILVNGLCRVGQVQVAFYLLE 330
Query: 92 KLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
++ G + D ++Y +LVD LC+ + EA +L + +G+V +Y+ ++
Sbjct: 331 EIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVV------MYSSLVS 384
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
G+ + K RE EM +V L +Y+I + + K G KAV L ++ +G
Sbjct: 385 GYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVP 444
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
DVV YNT+I + + V A + EM GC P+ VT +V+ LC GRV +A++++
Sbjct: 445 DVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLV 504
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
EM +K P+V+ Y L D + +S +MD M+L
Sbjct: 505 VEMSRKRHAPNVVVY-------------TSLIDGLCKS---DRMDDACMVL--------- 539
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
M G + D+FAY L+ ++ G + A +EM A+G
Sbjct: 540 -------DAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARG 581
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 99/202 (49%), Gaps = 8/202 (3%)
Query: 187 MCKSGKPWKAVKLYK-EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM-RVYREMREMGCQ 244
M +S +P A++ + ++ G K DV +YN ++ + V G F +VY+++ GC
Sbjct: 1 MRRSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDIL-VKSGHHFRTGKVYKDLLHSGCS 59
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGL 301
P++VT +I+ C+ G+ A L + + PDV ++ L K P + + L
Sbjct: 60 PNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKL 119
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG--CSPDEFAYNALVDAL 359
F+ M S ++P++ TY ++ + G L + ++M G +PD YN L++A
Sbjct: 120 FENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAF 179
Query: 360 IDKGMLDMARKYDEEMFAKGLS 381
+ A + E+M A G++
Sbjct: 180 YRASRIREACAFREKMKAAGIN 201
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 13/194 (6%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQE 122
+P T+ I+ + +++A+ + L G + D V+Y L+D LC+ V EA +
Sbjct: 408 VPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACD 467
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE---EMDKRGVVKDLHS 179
L F V + F + G+ + W EM ++ ++
Sbjct: 468 LADEMASRGCFPNDVTLGSV---------VFGLCRVGRVDDAWSLVVEMSRKRHAPNVVV 518
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y+ +D +CKS + A + M+ +G+ +D AY +I ++ V AM +Y EM
Sbjct: 519 YTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMV 578
Query: 240 EMGCQPSVVTCNTV 253
G P T T+
Sbjct: 579 ARGFLPDGSTSKTL 592
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 181/391 (46%), Gaps = 22/391 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDIL---GKFFEFD-LSWNLIHRMKDNP 61
C + W++A FN + D T + +ID+L GK E + L +I R
Sbjct: 348 CLSGKWEKAKCLFNEM-LDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQR----- 401
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYC-NLVDALCEYKHVIEA 120
IP+ T + K H +++A F K+ + G V C L+ LC+ ++ A
Sbjct: 402 GCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIA 461
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
EL + G+ Y++I+ G K + RE ++EM GV+ D+ SY
Sbjct: 462 LELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISY 521
Query: 181 SIYMDIMCKSGKPWKAVK-LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
+ + C+SGK WK K L+ EM G++ DV ++ +I + V A + M
Sbjct: 522 TSLIHGFCRSGK-WKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMI 580
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI- 298
+ GC P+ VT T++K LC N R+ EA + +M K GC+PDV+TY + L + I
Sbjct: 581 QRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIK 640
Query: 299 --LGLFDRMIE------SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF 350
L L +M+ + +P + +Y +++ + G ++K+M+ LG P+
Sbjct: 641 TALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVI 700
Query: 351 AYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+Y +L+ G L+ A+ EM +G+
Sbjct: 701 SYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQ 731
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 160/333 (48%), Gaps = 23/333 (6%)
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGLKDE---VSYCNLVDALCEYKHVIEAQELCFGENKNV 131
K + HL E + N ++G+K + VSY ++D LC+ + EA+EL F E K
Sbjct: 95 KINIALHLHQEML---NDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEAREL-FKEMKAQ 150
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
G M Y ++ G+ + W K + + EM G+ D+ + S+ +DI+CK G
Sbjct: 151 GM-----MPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEG 205
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
K +A +L + M ++G +D+V Y+T+I+ + + + A R++ M+++GC+P +
Sbjct: 206 KVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYG 265
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKG------CVPDVITYHCFFRCLEKPR---EILGLF 302
T++K LC+ G + A + EM C P +I+Y L K R E LF
Sbjct: 266 TLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELF 325
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
M GI P + +Y L+ F G ++ +M ++G PD + L+D L K
Sbjct: 326 KEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKK 385
Query: 363 GMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
G + A K E + +G P T LV+G
Sbjct: 386 GKVIEANKLLEVVIQRG--CIPDVVTCTTLVKG 416
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 182/404 (45%), Gaps = 57/404 (14%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDIL---GKFFEFD-LSWNLIHRMKDNP 61
C + W++A FN + D T + +IDIL GK E + L +I R
Sbjct: 167 CRSGKWEKAKCLFNEM-LDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQR----- 220
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA 120
I + T+ + K H ++EA F + + G + D ++Y L+ LC+ ++ A
Sbjct: 221 GCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTA 280
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+L + G G+ KC+ L SY
Sbjct: 281 LQLHQEMLNDTGRYGI-----------------------KCKP------------TLISY 305
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
SI +D +CK + +A +L+KEMK +GI DV++Y T+I +S + A ++ EM +
Sbjct: 306 SIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLD 365
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPRE 297
+G QP V T + +I +LC+ G+V EA +L + ++GC+PDV+T + L + +
Sbjct: 366 VGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISK 425
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE------LGCSPDEFA 351
LF +M + G P + T L++ + G ++ + K M + C P+ +
Sbjct: 426 ATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAIS 485
Query: 352 YNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
Y+ ++D L G D AR+ +EM K L P T L+ G
Sbjct: 486 YSIIIDGLCKCGREDEARELFKEM--KALGVIPDVISYTSLIHG 527
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 154/332 (46%), Gaps = 22/332 (6%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL 123
P+ T ++ + V EA + + G + D V+Y L+ LC + EA +L
Sbjct: 8 PDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQL 67
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM----DKRGV--VKDL 177
F K +G Y +++G + +EM + G+ L
Sbjct: 68 -FMSMKKLGCR-----PDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTL 121
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
SYSI +D +CK + +A +L+KEMK +G+ DV++Y ++I S + A ++ E
Sbjct: 122 VSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNE 181
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EK 294
M ++G + V T + +I +LC+ G+V EA +L M ++GC+ D++TY + L +
Sbjct: 182 MLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHR 241
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE------LGCSPD 348
E LF M + G RP Y L++ + G + + ++M + C P
Sbjct: 242 ISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPT 301
Query: 349 EFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+Y+ ++D L D AR+ +EM A+G+
Sbjct: 302 LISYSIIIDGLCKDRREDEARELFKEMKAQGI 333
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 108/217 (49%), Gaps = 9/217 (4%)
Query: 172 GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFA 231
G+ D+ + + +D+ CK GK +A +L + M ++G +D+V Y+T+I+ + + + A
Sbjct: 5 GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEA 64
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG------CVPDVITY 285
+++ M+++GC+P + T++K LC+ G++ A + EM C P +++Y
Sbjct: 65 TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSY 124
Query: 286 HCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE 342
L K R E LF M G+ P + +Y L+ F R G ++ +M +
Sbjct: 125 SIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD 184
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+G D + L+D L +G + A + E M +G
Sbjct: 185 VGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRG 221
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 135/302 (44%), Gaps = 20/302 (6%)
Query: 97 GLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKM 155
G++ +V+ L+D C+ VIEA EL + +V Y+ +++G
Sbjct: 5 GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVT------YSTLIKGLCMK 58
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM----KKKGIKM- 210
+ + + M K G D +Y M +C++GK A+ L++EM + GIK
Sbjct: 59 HRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCK 118
Query: 211 -DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
+V+Y+ +I + D A +++EM+ G P V++ ++I C +G+ +A +
Sbjct: 119 PTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCL 178
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGR 326
EM G DV T L K +++ L + MI+ G + TY L++
Sbjct: 179 FNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCM 238
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK----GLSA 382
+ ++ M++LGC PD AY L+ L G ++ A + +EM G+
Sbjct: 239 KHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKC 298
Query: 383 KP 384
KP
Sbjct: 299 KP 300
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 145/316 (45%), Gaps = 26/316 (8%)
Query: 6 CYANDWKRALEFFNWVETDC-----HFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDN 60
C + + K ALE + +D + +Y+ +ID L K D + L MK
Sbjct: 453 CQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMK-A 511
Query: 61 PSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIE 119
IP+ ++ + + + +A FN++ + G++ +V+ + L+D LC+ VIE
Sbjct: 512 LGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIE 571
Query: 120 AQELCFGENKNVGFSGLVE---MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
A EL +++ + T Y +++G + + + +M K G + D
Sbjct: 572 ANEL---------LEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPD 622
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKK------KGIKMDVVAYNTVIRAVGVSEGVDF 230
+ +Y M +C++G A++L+K+M K DV++Y+ +I + D
Sbjct: 623 VVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDE 682
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR 290
A +++EM+ +G P+V++ ++I C +G++ +A + EM +G + +TY
Sbjct: 683 ARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIH 742
Query: 291 CLEKPREI-LGLFDRM 305
K +I LF +M
Sbjct: 743 GFCKEGQIDKALFQKM 758
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EK 294
M +G QP V T +I + C+ G+V EA +L M ++GC+ D++TY + L +
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE------LGCSPD 348
E LF M + G RP Y L++ + G + + ++M + C P
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 349 EFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+Y+ ++D L D AR+ +EM A+G+
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGM 152
>gi|218202055|gb|EEC84482.1| hypothetical protein OsI_31142 [Oryza sativa Indica Group]
Length = 586
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 162/354 (45%), Gaps = 15/354 (4%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
+L FF + F+H D+ + + L F L +L + D P S + F ++
Sbjct: 112 SLRFFLFAGELPGFSHHPDSLLVLANSLAGARLFPLLRSL---LSDLPPSALSRGLFPLL 168
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNVG 132
F+ Y A L +A+ F+ + FG ++ + +L+ AL ++E E F E+
Sbjct: 169 FRAYSRARLPEDAIRAFSSMAGFGFPPTIADFHSLLFALSR-NGLVEYGERFFRES---- 223
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
S +++ K Y +++ GW + R ++EM +RGV D+H Y+ +D +C+ G
Sbjct: 224 -SAQFDVS-AKAYTILISGWAVVKKPENARSLFDEMVERGVELDVHVYNALIDALCRGGD 281
Query: 193 PWKAVKLYKEMKKK-GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
A + M+K G+ + Y + A S+ V A+RV M P+V T N
Sbjct: 282 ITSAQEQLSNMQKSHGLVPNAATYGPFLHAACASKDVRAALRVLDRMHTHALTPNVFTYN 341
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIES 308
VI+LLC+ G + EAY +L E+ +G PDV +Y+ K +E+ L L RM +
Sbjct: 342 AVIRLLCDLGEINEAYNILDEITTQGEKPDVWSYNTLLNAHCKLKEVNKALRLISRMDKE 401
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
P +Y MLL+ G VW ME+ G P Y ++ L K
Sbjct: 402 LCPPDRHSYNMLLKMLIGVGRFDTAIEVWDGMEKRGFHPGAATYAVMIHGLASK 455
>gi|242063152|ref|XP_002452865.1| hypothetical protein SORBIDRAFT_04g033840 [Sorghum bicolor]
gi|241932696|gb|EES05841.1| hypothetical protein SORBIDRAFT_04g033840 [Sorghum bicolor]
Length = 551
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 173/381 (45%), Gaps = 20/381 (5%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILG----KFFEFDLSWNLIHRMKDNPS-SIPN 66
K A FF W ++H + TYN +IDIL K +F + N++ MK + + S+P
Sbjct: 123 KLAFRFFAWASHQDGYSHESATYNDIIDILSGTRYKSRQFGVLCNVLDHMKRHGTRSVPV 182
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCF 125
I+ + Y HL + + E N L+DA C+ V EA E F
Sbjct: 183 EDLLEIL-RAYTEKHLTHMRKLAKKRRVRLRTPPETDALNVLLDAFCKCGMVKEA-EAVF 240
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
G K + + Y+++ GW + K + EEM + + +Y ++
Sbjct: 241 GRVKRRL------LGNAETYSILFFGWCRARDPKKAMKVLEEMIQMKHTPESFTYIAAIE 294
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMD---VVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
C +G +A +L++ M+ +G + Y+ +I A+ ++ ++ + +MR G
Sbjct: 295 SFCSAGLVSEARELFEFMRTEGSTISSPTAKTYSIMIVALAKADRMEECFELLSDMRSCG 354
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR---CLEKPREIL 299
C P V T +I+ +C G++ AY VL EM + G PD++TY+CF L K + L
Sbjct: 355 CMPDVSTYKELIEGMCLVGKLDAAYRVLEEMGRAGFPPDIVTYNCFLNVLCSLRKADDAL 414
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
L +RMIE+ P + TY ML+ F G +W +M+ GC Y ++D L
Sbjct: 415 ELCERMIEAHCEPSVHTYNMLMVMFFEMGEAHRALDIWLEMDTRGCQRAIDTYEIMIDGL 474
Query: 360 IDKGMLDMARKYDEEMFAKGL 380
D G + A +E+ + +
Sbjct: 475 FDCGKTEHATSLLDEVINRDM 495
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 128/306 (41%), Gaps = 14/306 (4%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
TD N ++D K + + R+K + N T+ I+F + A +AM
Sbjct: 217 TDALNVLLDAFCKCGMVKEAEAVFGRVKRR--LLGNAETYSILFFGWCRARDPKKAMKVL 274
Query: 91 NKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
++ + E +Y +++ C V EA+EL F + G + + K Y++++
Sbjct: 275 EEMIQMKHTPESFTYIAAIESFCSAGLVSEAREL-FEFMRTEGST--ISSPTAKTYSIMI 331
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
K +C E +M G + D+ +Y ++ MC GK A ++ +EM + G
Sbjct: 332 VALAKADRMEECFELLSDMRSCGCMPDVSTYKELIEGMCLVGKLDAAYRVLEEMGRAGFP 391
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
D+V YN + + D A+ + M E C+PSV T N ++ + E G A +
Sbjct: 392 PDIVTYNCFLNVLCSLRKADDALELCERMIEAHCEPSVHTYNMLMVMFFEMGEAHRALDI 451
Query: 270 LAEMPKKGCVPDVITYHC----FFRCLEKPREILGLFDRMIESGIR---PKMDTYVMLLR 322
EM +GC + TY F C K L D +I ++ K D ++ L
Sbjct: 452 WLEMDTRGCQRAIDTYEIMIDGLFDC-GKTEHATSLLDEVINRDMKLSYKKFDAIMLRLS 510
Query: 323 KFGRWG 328
G G
Sbjct: 511 AVGDLG 516
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 105/243 (43%), Gaps = 22/243 (9%)
Query: 6 CYANDWKRALEFFNWVETDCHF--THTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
C A A E F ++ T+ + T TY+ +I L K + + L+ M+ +
Sbjct: 297 CSAGLVSEARELFEFMRTEGSTISSPTAKTYSIMIVALAKADRMEECFELLSDMR-SCGC 355
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL----KDEVSYCNLVDALCEYKHVIE 119
+P+ +T++ + + LV + + L+E G D V+Y ++ LC + +
Sbjct: 356 MPDVSTYKELIEGMC---LVGKLDAAYRVLEEMGRAGFPPDIVTYNCFLNVLCSLRKADD 412
Query: 120 AQELCFGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
A ELC ++E + YNM++ +F+M + + W EMD RG +
Sbjct: 413 ALELC---------ERMIEAHCEPSVHTYNMLMVMFFEMGEAHRALDIWLEMDTRGCQRA 463
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
+ +Y I +D + GK A L E+ + +K+ ++ ++ + + R+
Sbjct: 464 IDTYEIMIDGLFDCGKTEHATSLLDEVINRDMKLSYKKFDAIMLRLSAVGDLGAIHRLSE 523
Query: 237 EMR 239
MR
Sbjct: 524 HMR 526
>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
Length = 1153
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 164/351 (46%), Gaps = 11/351 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+ VI +L + ++ +MK + P+ T+ + + + M +N
Sbjct: 285 THTVVIQVLCDAGRLSDAKDVFWKMKASDQK-PDRVTYITLLDKCGDSGDSQSVMEIWNA 343
Query: 93 LDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G D VSY +VDALC+ + EA + F E K G S + YN ++ G
Sbjct: 344 MVADGYNDNIVSYTAVVDALCQVGRLDEALAV-FDEMKEKGIS-----PEQYSYNSLISG 397
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K + + E + M+ G + +++ ++++ KSG+ KA++ Y+ MK KGI D
Sbjct: 398 FLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPD 457
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V A N V+ ++ S + A RV+ E+++MG P +T +IK + + EA +
Sbjct: 458 VAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFS 517
Query: 272 EMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+M + GCVPDV+ + L K E LF ++ E I P TY LL GR G
Sbjct: 518 DMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREG 577
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++ V + ++M P+ YN ++D L G ++ A M KG
Sbjct: 578 KVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKG 628
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 182/404 (45%), Gaps = 50/404 (12%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKR 76
++ E C T +YN+V+ L K F+ ++ + +MK + P++AT +
Sbjct: 621 LYSMTEKGC--TPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKILA--PDYATLCTILPS 676
Query: 77 YVTAHLVNEAMGTFNK---------------------LDEFGLKDEVSY----------- 104
+V L+ EA+ T + L++ G++ + +
Sbjct: 677 FVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILL 736
Query: 105 -----CNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWG 159
C L+ LC++K +EA +L F + K +G S KT YN ++RG +
Sbjct: 737 NDFFLCPLIRHLCKHKKALEAHQL-FNKFKGLGVS-----LKTGSYNSLIRGLVDENLID 790
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+ + EM + G D +Y++ +D M KS + + +++ EM +KG + V YNT+I
Sbjct: 791 IAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTII 850
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
+ S+ ++ A+ +Y + G P+ T ++ L + G++ +A + EM + GC
Sbjct: 851 SGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCK 910
Query: 280 PDVITYHCFF---RCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVV 336
P+ Y+ R + +F++M+E GI P + +Y +L+ G L
Sbjct: 911 PNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSY 970
Query: 337 WKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
++++ ELG PD YN L+D L ++ A EM KG+
Sbjct: 971 FRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGI 1014
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 120/240 (50%), Gaps = 3/240 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ K + + E ++ M + G+ + +YS+ M K + L EM+
Sbjct: 181 YNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEME 240
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+G+K +V +Y IR +G + D A ++ +M + GC+P VVT VI++LC+ GR+
Sbjct: 241 ARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLS 300
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFF-RCLEK--PREILGLFDRMIESGIRPKMDTYVMLL 321
+A V +M PD +TY +C + + ++ +++ M+ G + +Y ++
Sbjct: 301 DAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVV 360
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ G L V+ +M+E G SP++++YN+L+ + M D A + M A G S
Sbjct: 361 DALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPS 420
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 169/353 (47%), Gaps = 13/353 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKD-NPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
+YNS+I K FD + L + M PS PN T + Y + +A+ +
Sbjct: 390 SYNSLISGFLKADMFDRALELFNHMNACGPS--PNGYTHVLFINYYGKSGQSLKAIQRYE 447
Query: 92 KLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G+ +V+ N V + + + F E K++G S T Y M+++
Sbjct: 448 HMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVS-----PDTITYTMMIKC 502
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K S + F+ +M + G V D+ + + +D + K GK +A KL+ ++K+ I+
Sbjct: 503 CSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPT 562
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
YNT++ +G V M + EM P+++T NTV+ L +NG V A +L
Sbjct: 563 NGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLY 622
Query: 272 EMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M +KGC PD+ +Y+ L E+ E +F +M + + P T +L F + G
Sbjct: 623 SMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQM-KKILAPDYATLCTILPSFVKNG 681
Query: 329 FLRPVFVVWKK-MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
++ K+ + + C+ D+ ++++L++ +++K ++ + ++ E + ++G+
Sbjct: 682 LMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGI 734
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 165/350 (47%), Gaps = 22/350 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF-N 91
TYN ++D +GK + + M + T+ + V + + +A+ + N
Sbjct: 810 TYNLILDAMGKSMRIEEMLRVQAEMHRKGYE-STYVTYNTIISGLVKSKRLEQAIDLYYN 868
Query: 92 KLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E +Y L+D L + +++A+ L F E G + N T IYN++L G
Sbjct: 869 LMSEGFSPTPCTYGPLLDGLLKAGKMVDAENL-FNEMLEYG----CKPNCT-IYNILLNG 922
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ +E+M ++G+ D+ SY++ +D +C +G+ + ++++ + G++ D
Sbjct: 923 HRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPD 982
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
++ YN +I +G SE ++ A+ ++ EM++ G P++ T N++I L + G+ EA +
Sbjct: 983 LIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYE 1042
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREILGLFDRM------IESGIRPKMDTYVMLLRKFG 325
E+ KG P+V TY+ R + G D + G+ K L+
Sbjct: 1043 ELLIKGWKPNVFTYNALIRGY----SVSGSTDNAYAAYDCVAVGVSLK----TALISGLV 1094
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
+ ++ +M+ GC PD+F YN ++DA+ ++ K EE+
Sbjct: 1095 DENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIGKSMRIEEMLKVQEEI 1144
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 166/371 (44%), Gaps = 11/371 (2%)
Query: 16 EFFNWVETDCHFTHTTD--TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
E + +E H H + TYN+V+D L K E + + +++ M + + P+ +++ +
Sbjct: 581 EVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCT-PDLSSYNTV 639
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGF 133
+ EA F ++ + D + C ++ + + + EA K
Sbjct: 640 MYGLIKEERFEEAFRMFCQMKKILAPDYATLCTILPSFVKNGLMKEALHTV----KEYIL 695
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
+K+ +++ + G + K EF E + RG++ + + +CK K
Sbjct: 696 KADCNTDKSSFHSL-MEGILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKA 754
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
+A +L+ + K G+ + +YN++IR + +D A ++ EM+ +GC P T N +
Sbjct: 755 LEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLI 814
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGI 310
+ + ++ R+ E V AEM +KG +TY+ L K + + + L+ ++ G
Sbjct: 815 LDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGF 874
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
P TY LL + G + ++ +M E GC P+ YN L++ G + +
Sbjct: 875 SPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQ 934
Query: 371 YDEEMFAKGLS 381
E+M +G++
Sbjct: 935 IFEKMVEQGIN 945
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 118/236 (50%), Gaps = 5/236 (2%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M + G+ + ++Y+ + + KSG +A+++YK M + GI V Y+ ++ + G
Sbjct: 169 MREAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRD 228
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
VD + + EM G +P+V + I++L + R EAY +L +M GC PDV+T+
Sbjct: 229 VDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTV 288
Query: 288 FFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
+ L + + +F +M S +P TY+ LL K G G + V +W M G
Sbjct: 289 VIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADG 348
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGE 400
+ + +Y A+VDAL G LD A +EM KG+S P + L+ G L +
Sbjct: 349 YNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGIS--PEQYSYNSLISGFLKAD 402
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 114/240 (47%), Gaps = 3/240 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y + +R + + + + + +M+ G D+ ++++ + ++C +G+ A ++ +MK
Sbjct: 251 YTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMK 310
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K D V Y T++ G S M ++ M G ++V+ V+ LC+ GR+
Sbjct: 311 ASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLD 370
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLL 321
EA AV EM +KG P+ +Y+ K L LF+ M G P T+V+ +
Sbjct: 371 EALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFI 430
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+G+ G ++ M+ G PD A NA++ +L G L MA++ E+ G+S
Sbjct: 431 NYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVS 490
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 124/277 (44%), Gaps = 21/277 (7%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F+ T TY ++D L K + + NL + M + PN + I+ + A
Sbjct: 874 FSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCK-PNCTIYNILLNGHRIAGNTENV 932
Query: 87 MGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK-- 143
F K+ E G+ ++ SY L+D LC + + F L+E+
Sbjct: 933 CQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSY---------FRQLLELGLEPDL 983
Query: 144 -IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
IYN+++ G K + + EM K+G+V +L++Y+ + + K+GK +A ++Y+E
Sbjct: 984 IIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEE 1043
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT-VIKLLCENG 261
+ KG K +V YN +IR VS D A Y C V+ T +I L +
Sbjct: 1044 LLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAYD------CVAVGVSLKTALISGLVDEN 1097
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI 298
+ A + AEM ++GC PD TY+ + K I
Sbjct: 1098 LINIAEGLFAEMKRRGCGPDQFTYNLILDAIGKSMRI 1134
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 3/200 (1%)
Query: 173 VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM 232
V S + +++M G+ +++ M+K+ +K +V + TV VGV G+ A
Sbjct: 104 AVHTTESCNYMLELMRAHGRVGDMAQVFDLMQKQIVKANVGTFATVFSGVGVQGGLRSAP 163
Query: 233 RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
MRE G + T N +I L ++G EA V M + G P V TY
Sbjct: 164 VALPVMREAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSF 223
Query: 293 EKPRE---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE 349
K R+ +L L + M G++P + +Y + +R G+ + + KME+ GC PD
Sbjct: 224 GKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDV 283
Query: 350 FAYNALVDALIDKGMLDMAR 369
+ ++ L D G L A+
Sbjct: 284 VTHTVVIQVLCDAGRLSDAK 303
>gi|11120809|gb|AAG30989.1|AC012396_25 hypothetical protein [Arabidopsis thaliana]
Length = 466
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 166/380 (43%), Gaps = 18/380 (4%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILG----KFFEFDLSWNLIHRMKDNPSSIPNH 67
K A FF W H++H YN +IDIL K +F + +++ MK N ++
Sbjct: 38 KTAFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLV 97
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFG 126
+ ++Y +L + K + E++ N L+DALC+ V E + L
Sbjct: 98 DVLLEILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRR 157
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
V +N++ GW ++ K + EEM + G + +Y +D
Sbjct: 158 MRHRVKPDA-------NTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDT 210
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT---VIRAVGVSEGVDFAMRVYREMREMGC 243
C++G +A L+ M KG + T +I A+ ++ + + M GC
Sbjct: 211 FCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGC 270
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILG 300
P V T VI+ +C +V EAY L EM KG PD++TY+CF R L K E L
Sbjct: 271 LPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALK 330
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L+ RM+ES P + TY ML+ F F W +M++ C D Y A+++ L
Sbjct: 331 LYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLF 390
Query: 361 DKGMLDMARKYDEEMFAKGL 380
D A EE+ KGL
Sbjct: 391 DCHRAKEACFLLEEVVNKGL 410
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 138/318 (43%), Gaps = 13/318 (4%)
Query: 32 DTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
+ +N ++D L K L+ RM+ P+ TF ++F + +AM
Sbjct: 133 NAFNMLLDALCKCGLVKEGEALLRRMRHRVK--PDANTFNVLFFGWCRVRDPKKAMKLLE 190
Query: 92 KLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELC-FGENKNVGFSGLVEMNKTKIYNMIL 149
++ E G K E +YC +D C+ V EA +L F K S K + +++
Sbjct: 191 EMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPT----AKTFALMI 246
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
K +C E M G + D+ +Y ++ MC + K +A K EM KG
Sbjct: 247 VALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYP 306
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
D+V YN +R + + D A+++Y M E C PSV T N +I + E A+
Sbjct: 307 PDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNT 366
Query: 270 LAEMPKKGCVPDVITY----HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
EM K+ CV DV TY + F C + +E L + ++ G++ + L +
Sbjct: 367 WTEMDKRDCVQDVETYCAMINGLFDC-HRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLS 425
Query: 326 RWGFLRPVFVVWKKMEEL 343
G L+ + V + M++
Sbjct: 426 EVGNLKAIHKVSEHMKKF 443
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 180/373 (48%), Gaps = 29/373 (7%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN++ID + K + +++L + K + P+ T+ + + + +A+ FNK+
Sbjct: 336 YNTIIDGMCKDKHVNDAFDL-YSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKM 394
Query: 94 DEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI------YN 146
+ +V ++ LVD C+ ++ EA KNV L M K I Y+
Sbjct: 395 TSKNIIPDVYTFSILVDGFCKDGNIKEA--------KNV----LAMMMKQSIKPDVVTYS 442
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++ G+ ++ K + M RGV ++ SY+I ++ CK +A+KL+KEM K
Sbjct: 443 SLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHK 502
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
I DV+ Y+++I + S + +A+ + EM G QP ++T N+++ LC+ V +A
Sbjct: 503 QIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKA 562
Query: 267 YAVLAEMPKKGCVPDVITYHCFFR--C----LEKPREILGLFDRMIESGIRPKMDTYVML 320
+L ++ +G PD+ TY + C LE R++ F+ ++ G + Y ++
Sbjct: 563 ITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKV---FEDLLVKGYNLDVYAYTVM 619
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
++ F G + KMEE GC PD Y ++ +L +K DMA K EM +GL
Sbjct: 620 IQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGL 679
Query: 381 SAKPREELGTKLV 393
++L ++
Sbjct: 680 LVALTDDLVASIL 692
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 9/241 (3%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y ++ G K+ E D + V D+ Y+ +D MCK A LY E
Sbjct: 301 YGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKV 360
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K I DV YN +I + + A+ ++ +M P V T + ++ C++G ++
Sbjct: 361 SKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIK 420
Query: 265 EAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPKMDTYV 318
EA VLA M K+ PDV+TY +C + K I F+ M G+ + +Y
Sbjct: 421 EAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESI---FNTMSHRGVTANVQSYN 477
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+++ F + + ++K+M PD Y++L+D L G + A + +EM +
Sbjct: 478 IMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYR 537
Query: 379 G 379
G
Sbjct: 538 G 538
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 102/255 (40%), Gaps = 13/255 (5%)
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSI---YMDIMCKSGKPWKAVKLYKE-----M 203
W + W R F ++ + + LHS+ I Y K K+ ++ E +
Sbjct: 195 WIVLILWDFKRLFLKDFLQSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKI 254
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
K G + D + T I+ + + A+ + ++ MG V+ T+I LC+ G
Sbjct: 255 LKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGET 314
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVML 320
+ A +L K PDV+ Y+ + K + + L+ + I P + TY L
Sbjct: 315 KAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNAL 374
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ F G L+ ++ KM PD + ++ LVD G + A+ M +
Sbjct: 375 ISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQ-- 432
Query: 381 SAKPREELGTKLVQG 395
S KP + L+ G
Sbjct: 433 SIKPDVVTYSSLMDG 447
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 169/352 (48%), Gaps = 13/352 (3%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
Y+++ID + K + +++L M S P+ T+ + + + A+ FN++
Sbjct: 201 YSTIIDSMCKDKLVNDAFDLYCEMVSKRIS-PDVVTYSSLISGFCVVGKLKYAVDLFNRM 259
Query: 94 DEFGLKDEV-SYCNLVDALCEYKHVIEAQE-LCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ V ++ L+D C+ V EA+ L KNV + YN ++ G
Sbjct: 260 ISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVT-------YNSLMDG 312
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + K + + M +RGV D+ SYSI ++ CK +A+KL++EM K I +
Sbjct: 313 YCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPN 372
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
VV YN+++ + S A+ + EM + G +++T N+++ +C+N V +A +L
Sbjct: 373 VVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLT 432
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
++ +KG PD+ TY L K + +F+ ++ G P + TY L+ F G
Sbjct: 433 KIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKG 492
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
F + KM++ GC P+ Y L+ +L +K D A K EM A+GL
Sbjct: 493 FFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 161/366 (43%), Gaps = 39/366 (10%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCE---------- 113
P+ TF I+ K V++A+ +K+ G + D+VSY L++ LC
Sbjct: 126 PDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQL 185
Query: 114 ---------------YKHVIEAQELCFGENKNVGFSGLVEMNKTKI------YNMILRGW 152
Y +I++ +C + N F EM +I Y+ ++ G+
Sbjct: 186 LRRVDGKLVRPNVVMYSTIIDS--MCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGF 243
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
+ + + M + +++++SI +D CK GK +A + M KK +K+DV
Sbjct: 244 CVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDV 303
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V YN+++ + + V+ A ++ M + G P V + + +I C+ V EA + E
Sbjct: 304 VTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEE 363
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M K P+V+TY+ L K L L D M + G + TY +L +
Sbjct: 364 MHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNH 423
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELG 389
+ V+ K++E G PD F Y L++ L G LD A+K E++ KG S P
Sbjct: 424 VDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYS--PNIYTY 481
Query: 390 TKLVQG 395
T L+ G
Sbjct: 482 TSLING 487
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 159/366 (43%), Gaps = 49/366 (13%)
Query: 53 LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV-DAL 111
L+H K+NP IP F + + A A+ +++ G+K + CNL+ +
Sbjct: 48 LLH--KNNP--IPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCF 103
Query: 112 CEYKHV-----------------------IEAQELCF-GE-NKNVGFSGLVEMNKTKI-- 144
+ H+ I + LC GE +K + F V ++
Sbjct: 104 SQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQ 163
Query: 145 --YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
Y ++ G ++ + +D + V ++ YS +D MCK A LY E
Sbjct: 164 VSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCE 223
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M K I DVV Y+++I V + +A+ ++ M P+V T + +I C+ G+
Sbjct: 224 MVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGK 283
Query: 263 VREAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPKMDT 316
VREA VLA M KK DV+TY +C + + K + LF+ M + G+ P + +
Sbjct: 284 VREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKS---LFNVMAQRGVTPDVWS 340
Query: 317 YVMLLRKFGRWGFLRPVFVVWKKMEELGCS---PDEFAYNALVDALIDKGMLDMARKYDE 373
Y +++ F + ++ V K EE+ C P+ YN+LVD L G A + +
Sbjct: 341 YSIMINGFCK---IKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVD 397
Query: 374 EMFAKG 379
EM +G
Sbjct: 398 EMHDRG 403
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 166/369 (44%), Gaps = 17/369 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A + + A++ +E T YN + L K + + ++ MKD P
Sbjct: 29 CLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACK-P 87
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELC 124
+ TF + A ++EA ++++ G + V+Y L++ L EA +
Sbjct: 88 DVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLV- 146
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKR-GVVKDLHSYSIY 183
G+ T+ YN I+ G+ K + F EEM +R G D +YSI
Sbjct: 147 --------MQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSIL 198
Query: 184 MDIMCKSGKPWKAVKLYKEM-KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ +CKS KA +L +EM +K VVA+NT++ ++ +D A + M E G
Sbjct: 199 INGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHG 258
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EIL 299
C P VVT +T+I LC G V + +A+L +M +GC PDV+TY L K E
Sbjct: 259 CAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEAC 318
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
L RM+E G P TY ++ + L + + + G D A+ AL+ +
Sbjct: 319 RLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALLLS- 377
Query: 360 IDKGMLDMA 368
+ K +LD A
Sbjct: 378 VKKRLLDRA 386
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 146/326 (44%), Gaps = 22/326 (6%)
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEF-GLKDEVSYCNL-VDALCEYKHVIEAQEL 123
++ T+ ++ + + A + AM ++++ G+ S N V ALC+ V EA E+
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+V +N ++ G K + ++ +EM++ G +L +Y+
Sbjct: 77 VKNMKDGACKPDVV------TFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTL 130
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE-MG 242
++ + +G+ +AV + + M D YN +I S +D A EM++ G
Sbjct: 131 INGLSSAGRSGEAVLVMQGMTTTP---DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAG 187
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEM-PKKGCVPDVITY------HCFFRCLEKP 295
C P T + +I LC++ +R+A +L EM +K C V+ + +C + L++
Sbjct: 188 CSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRA 247
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
RE+L M+E G P + TY ++ R G + F + +KM GC PD Y L
Sbjct: 248 RELLS---SMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVL 304
Query: 356 VDALIDKGMLDMARKYDEEMFAKGLS 381
V L G + A + + M G +
Sbjct: 305 VTGLCKAGKMVEACRLVKRMLEDGCT 330
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Query: 282 VITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKME 341
++ HC L+ ++L ++ + G+ P Y + + G + V K M+
Sbjct: 24 LVRAHCLAGELQAAMDLLREMEQ--QPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMK 81
Query: 342 ELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ C PD +N L+ L G LD A++ +EM G +A
Sbjct: 82 DGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAA 122
>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 582
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 190/419 (45%), Gaps = 57/419 (13%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C +AL F + V F +Y ++I+ L K + L+ R+ D P
Sbjct: 151 CLKGHIHQALNFHDKVVAQ-GFHLDQVSYGTLINGLCKVGRITAALQLLKRV-DGKLVQP 208
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKL-------DEFG-------------LKDEV--- 102
N + ++ A LVN+A ++++ D+F LK+ V
Sbjct: 209 NAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLL 268
Query: 103 -------------SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI----- 144
++ LVDA C+ V EA+ + G V M K I
Sbjct: 269 HKMILENINPRMYTFSILVDAFCKEGKVKEAK-MMLG----------VTMKKDIILDVVT 317
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G+ + K ++ ++ M RGV+ ++ SY+ ++ +CK +AV L++EM+
Sbjct: 318 YNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMR 377
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+ I +VV YN++I +G + +++ EM + G P+++T N+++ LC+N V
Sbjct: 378 CRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVD 437
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLL 321
+A A+L + +G PD+ TY + L K + +F+ ++ G + TY +++
Sbjct: 438 KAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMI 497
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ F G + KME+ GC P+ Y ++ +L +K DMA K EM A+GL
Sbjct: 498 QGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGL 556
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 155/355 (43%), Gaps = 21/355 (5%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
+N ++ L K + +L +M+ N + + TF I+ + L + + F K+
Sbjct: 73 FNKILSSLVKAKHHSTALSLHQQMELN-GIVSDFFTFNILINCFSQLGLNSLSFSVFGKI 131
Query: 94 DEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNV--GFSGLVEMNKTKIYNMILR 150
+ G + +++ L+ LC H+ +A +K V GF +++ Y ++
Sbjct: 132 LKKGFDPNAITFNTLIKGLCLKGHIHQALNF---HDKVVAQGF----HLDQVS-YGTLIN 183
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
G K+ + + +D + V + Y++ +D MCK+ A LY +M K I
Sbjct: 184 GLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISP 243
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
D N++I + + A+ + +M P + T + ++ C+ G+V+EA +L
Sbjct: 244 DDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMML 303
Query: 271 AEMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
KK + DV+TY +C + + K ++I FD M G+ + +Y ++
Sbjct: 304 GVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDI---FDSMASRGVIANVQSYTTMINGL 360
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ + ++++M P+ YN+L+D L G + K +EM +G
Sbjct: 361 CKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRG 415
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 80/173 (46%), Gaps = 3/173 (1%)
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
++ +N ++ ++ ++ A+ ++++M G T N +I + G +++V
Sbjct: 70 IIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFG 129
Query: 272 EMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
++ KKG P+ IT++ + CL+ + L D+++ G +Y L+ + G
Sbjct: 130 KILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVG 189
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ + K+++ P+ YN ++D + +++ A +M AK +S
Sbjct: 190 RITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRIS 242
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 131 bits (329), Expect = 7e-28, Method: Composition-based stats.
Identities = 106/430 (24%), Positives = 177/430 (41%), Gaps = 82/430 (19%)
Query: 15 LEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
++FF W ++ H T TY ++I L ++ W +I M NP + +
Sbjct: 1097 MQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVV 1156
Query: 75 KRYVTAHLVNEAMGTF-----------------------------------NKLDEFG-- 97
+ A +V +A+ F N++ G
Sbjct: 1157 RMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHC 1216
Query: 98 LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSW 157
D V+Y L+ A C+ A +L E K +G TKIY M++ +FK +
Sbjct: 1217 FPDTVTYSALISAFCKLGRRDSAIQL-LNEMKEIGMQ-----PTTKIYTMLIALFFKFND 1270
Query: 158 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
+EEM + D+ +Y+ + + K+G+ +A + EM+++G + D V N
Sbjct: 1271 AHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNN 1330
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLL-------------------- 257
+I +G + +D AM++++EM + C PSVVT NT+IK L
Sbjct: 1331 MINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKES 1390
Query: 258 ----------------CENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI--- 298
C+ R+ +A +L EM +KG P Y L K +
Sbjct: 1391 GISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLA 1450
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
LF + E+ Y ++++ G+ G L ++ +M +LGC+PD +AYNAL+
Sbjct: 1451 CELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSG 1510
Query: 359 LIDKGMLDMA 368
L GMLD A
Sbjct: 1511 LARTGMLDEA 1520
Score = 113 bits (283), Expect = 1e-22, Method: Composition-based stats.
Identities = 103/414 (24%), Positives = 179/414 (43%), Gaps = 47/414 (11%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKD---NPSS 63
+ +++ + +N + T+ H T TY+++I K D + L++ MK+ P++
Sbjct: 1196 HEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTT 1255
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDE----FGLKDEVSYCNLVDALCEYKHVIE 119
+ FK N+A G + +E + D +Y L+ L + + E
Sbjct: 1256 KIYTMLIALFFK-------FNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDE 1308
Query: 120 A--------QELCFGE----NKNVGFSG-----------LVEMNKTK------IYNMILR 150
A +E C + N + F G EM + YN I++
Sbjct: 1309 AYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIK 1368
Query: 151 GWFK-MSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
F+ S + ++E M + G+ +YSI +D CK+ + KA+ L +EM +KG
Sbjct: 1369 ALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFP 1428
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
AY ++I A+G ++ D A +++E++E S +IK L + GR+ +A +
Sbjct: 1429 PCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINM 1488
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
EM K GC PDV Y+ L + E L RM E G P +++Y ++L +
Sbjct: 1489 FDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAK 1548
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G + M++ PD +YN ++ AL GM + A K +EM G
Sbjct: 1549 TGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGF 1602
Score = 104 bits (259), Expect = 1e-19, Method: Composition-based stats.
Identities = 79/331 (23%), Positives = 149/331 (45%), Gaps = 10/331 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +I LGK D +++ M+ P+ M A +++AM F +
Sbjct: 1292 TYTELIRGLGKAGRIDEAYHFFCEMQREGCR-PDTVFMNNMINFLGKAGRLDDAMKLFQE 1350
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
++ + V+Y ++ AL E K F K G S + Y++++ G
Sbjct: 1351 METLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGIS-----PSSFTYSILIDG 1405
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K + K EEMD++G +Y +D + K+ + A +L++E+K+
Sbjct: 1406 FCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSS 1465
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
Y +I+ +G + +D A+ ++ EM ++GC P V N ++ L G + EA + +
Sbjct: 1466 ARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMR 1525
Query: 272 EMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M + GC+PD+ +Y+ L K P + + M +S +RP + +Y +L G
Sbjct: 1526 RMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAG 1585
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ K+M LG D Y+++++A+
Sbjct: 1586 MFEEASKLMKEMNTLGFEYDLITYSSILEAI 1616
Score = 93.2 bits (230), Expect = 2e-16, Method: Composition-based stats.
Identities = 76/288 (26%), Positives = 135/288 (46%), Gaps = 20/288 (6%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDL------SWNLIHRMKDNPSSIPNH 67
A++ F +ET + TYN++I L FE SW RMK++ S P+
Sbjct: 1344 AMKLFQEMET-LRCIPSVVTYNTIIKAL---FESKSRASEVPSW--FERMKESGIS-PSS 1396
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKD-EVSYCNLVDALCEYKHVIEAQELCFG 126
T+ I+ + + + +AM ++DE G +YC+L+DAL + K A EL
Sbjct: 1397 FTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQE 1456
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
+N G S ++Y ++++ K ++EM+K G D+++Y+ M
Sbjct: 1457 LKENCGSS------SARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSG 1510
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+ ++G +A+ + M++ G D+ +YN ++ + + G AM + M++ +P
Sbjct: 1511 LARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPD 1570
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
VV+ NTV+ L G EA ++ EM G D+ITY + K
Sbjct: 1571 VVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGK 1618
Score = 77.8 bits (190), Expect = 9e-12, Method: Composition-based stats.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 14/213 (6%)
Query: 178 HSYSIYM------DIMCKSGKPWKAVKLYKEMKKKGI-KMDVVAYNTVIRAVGVSEGVDF 230
H S YM +++ + G+ WK ++ EM + I + + V+R +G ++ V
Sbjct: 1111 HDTSTYMALIHCLEVVEQYGEMWKMIQ---EMVRNPICVVTPTELSDVVRMLGNAKMVRQ 1167
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG-CVPDVITYHCF- 288
A+ ++ +++ CQP N++I +L G+ + + + EM +G C PD +TY
Sbjct: 1168 AITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALI 1227
Query: 289 --FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
F L + + L + M E G++P Y ML+ F ++ ++++M C
Sbjct: 1228 SAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCR 1287
Query: 347 PDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
PD F Y L+ L G +D A + EM +G
Sbjct: 1288 PDVFTYTELIRGLGKAGRIDEAYHFFCEMQREG 1320
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 160/361 (44%), Gaps = 43/361 (11%)
Query: 28 THTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAM 87
T +T Y S+I L FD + L M + P+ T+ +M ++ EA
Sbjct: 355 TPSTVAYTSLIHGLCMANSFDDARELFADM-NRRGCPPSPVTYNVMIDASCKRGMLEEAC 413
Query: 88 GTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYN 146
K+ E G + D V+Y ++D LC+ V EA L F E + +G + + +N
Sbjct: 414 DLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEAL-LLFNEMERLGCT-----PNRRSHN 467
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
I+ G + S +D C+ GK +A +L K M
Sbjct: 468 TIILGLCQQSK--------------------------IDQACQRGKLDEAFRLLKRMTDD 501
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
G DVV Y+T+I + VD A + +M + C+P+VVT NT+I LC+ GR++EA
Sbjct: 502 GHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEA 561
Query: 267 YAVLAEMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVML 320
VL M G PDV+TY HC E+ RE+L M+ G+ P + TY L
Sbjct: 562 REVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELL---SDMVARGLAPNVVTYTAL 618
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + L V+ +M+ GC+P+ F Y AL+ G +D K EM G+
Sbjct: 619 VSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGI 678
Query: 381 S 381
S
Sbjct: 679 S 679
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 160/345 (46%), Gaps = 17/345 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKL-DEFGLKDEVSYCNLVDALCEYKHVIEAQEL 123
P T ++ + + + V++A + DE DEVSYC ++D LC+ V EA L
Sbjct: 210 PCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRL 269
Query: 124 CFGENK-NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
FG+ + S + YN+++ G + + + +E+M++R V D SY I
Sbjct: 270 -FGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGI 328
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D + K+GK A L++++ G+ VAY ++I + ++ D A ++ +M G
Sbjct: 329 LIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRG 388
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REIL 299
C PS VT N +I C+ G + EA ++ +M + G VPDV+TY+ L K E L
Sbjct: 389 CPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEAL 448
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRW---------GFLRPVFVVWKKMEELGCSPDEF 350
LF+ M G P ++ ++ + G L F + K+M + G PD
Sbjct: 449 LLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVV 508
Query: 351 AYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
Y+ L+ L +D AR E+M + KP L+ G
Sbjct: 509 TYSTLISGLCSIARVDDARHLLEDMVKR--QCKPTVVTQNTLIHG 551
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 170/391 (43%), Gaps = 61/391 (15%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A++ F+ +E +CH + D YN +ID L K E + ++ M D
Sbjct: 29 AVKIFSLME-ECHSPYP-DVYNVLIDSLSKRQETEAVKKMVQVMVDR------------- 73
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGF 133
G F D ++ ++ LC+ + EA EL E ++
Sbjct: 74 --------------GCF--------PDSFTFTTILCGLCKAGKMDEA-ELVMDEMRSRMI 110
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
+ + + LRG + ++ + E M V + +Y+I + +CK+ +
Sbjct: 111 PPYFATSSFLAHELCLRGSMERAF-----QLLEIMP----VANSSAYNIVVVALCKAARV 161
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
A++L + M +K I + + ++V+ + S +D A++VYRE R +P +VT N +
Sbjct: 162 DDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRR---EPCLVTLNVL 218
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLF-DRMI--- 306
++ C G+V +A +L MP + C PD ++Y L K E + LF DR +
Sbjct: 219 LEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSS 278
Query: 307 --ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
S P + Y +++ + + +++KM E SPD ++Y L+D L G
Sbjct: 279 SSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGK 338
Query: 365 LDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
L+ AR +++ G++ P T L+ G
Sbjct: 339 LNDARNLFQKLLHSGVT--PSTVAYTSLIHG 367
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 128/332 (38%), Gaps = 67/332 (20%)
Query: 6 CYANDWKRALEFF-NWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C AN + A E F + C + T YN +ID K + + +LI +M ++ +
Sbjct: 369 CMANSFDDARELFADMNRRGCPPSPVT--YNVMIDASCKRGMLEEACDLIKKMIED-GHV 425
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG--------------------------- 97
P+ T+ + + V EA+ FN+++ G
Sbjct: 426 PDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQR 485
Query: 98 ------------------LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEM 139
+ D V+Y L+ LC V +A+ L L +M
Sbjct: 486 GKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHL------------LEDM 533
Query: 140 NKTK------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
K + N ++ G K + RE + M G D+ +Y+ + C++G+
Sbjct: 534 VKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQT 593
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
+A +L +M +G+ +VV Y ++ + + + A V+ +M+ GC P++ T +
Sbjct: 594 ERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTAL 653
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
I C G+V + EM G PD + Y
Sbjct: 654 ILGFCSAGQVDGGLKLFGEMVCAGISPDHVVY 685
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 121/279 (43%), Gaps = 22/279 (7%)
Query: 6 CYANDWKRALEFFNWVE----TDCHFTHTTDTY----NSVIDILGKFFEFDLSWNLIHRM 57
C ++ + AL FN +E T +H T S ID + + D ++ L+ RM
Sbjct: 439 CKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRM 498
Query: 58 KDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKH 116
D+ +P+ T+ + + V++A + + K V N L+ LC+
Sbjct: 499 TDD-GHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGR 557
Query: 117 VIEAQELCFGENKNVGFSGLVEMNKTK---IYNMILRGWFKMSWWGKCREFWEEMDKRGV 173
+ EA+E+ +V ++ YN ++ G + + RE +M RG+
Sbjct: 558 IKEAREV---------LDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGL 608
Query: 174 VKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMR 233
++ +Y+ + +CK+ + +A ++ +MK G ++ Y +I + VD ++
Sbjct: 609 APNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLK 668
Query: 234 VYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
++ EM G P V T+ LC++GR A +L E
Sbjct: 669 LFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILRE 707
Score = 38.1 bits (87), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
C G+ ++AVK++ M++ V YN +I ++ + + ++ + M + GC P
Sbjct: 21 CNVGRTFEAVKIFSLMEECHSPYPDV-YNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDS 79
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVP 280
T T++ LC+ G++ EA V+ EM + P
Sbjct: 80 FTFTTILCGLCKAGKMDEAELVMDEMRSRMIPP 112
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 161/351 (45%), Gaps = 14/351 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +I LG D L M PN T+ + + +A V+EA F +
Sbjct: 137 TYTILIRSLGTIGRIDAVMKLFESMTAQGCQ-PNLFTYHSVMHAFGSAGRVDEACDIFQQ 195
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + GL+ D V+Y L+DA + + A + K+ F+ V YN +L
Sbjct: 196 MVQKGLQPDAVTYNILIDAFGKTGQLERAFDFV---GKSRSFTNEV------TYNSLLSS 246
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ E + +M +G+V + +Y+I ++ + +G+ +LY EM IK D
Sbjct: 247 LGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYD 306
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+V N V+ + + V+ A ++++M+ G VT N +I L G++ A A+L
Sbjct: 307 IVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLL 366
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM + GC P++ITY+ K + LF M E G+ P + +Y L+ FG+ G
Sbjct: 367 EMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAG 426
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++++M+ GC P+ YN L+D LI G A +Y EM G
Sbjct: 427 RTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAG 477
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 100/195 (51%)
Query: 165 WEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGV 224
+++M K V D +++I +D + K+ + +A ++ +M K + DV Y +IR++G
Sbjct: 88 YKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGT 147
Query: 225 SEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
+D M+++ M GCQP++ T ++V+ GRV EA + +M +KG PD +T
Sbjct: 148 IGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVT 207
Query: 285 YHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
Y+ K ++ FD + +S TY LL GR G ++ + ++ +M+ G
Sbjct: 208 YNILIDAFGKTGQLERAFDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKG 267
Query: 345 CSPDEFAYNALVDAL 359
+E Y L++ L
Sbjct: 268 LVSNELTYAILIERL 282
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 112/242 (46%), Gaps = 6/242 (2%)
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
T+++N ++ + + + K + K G ++YS + + K G + +YK
Sbjct: 30 TQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGDVQNGLLMYK 89
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
+M K D +N +I ++ ++ V+ A V+ +M ++ P V T +I+ L G
Sbjct: 90 QMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIG 149
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYV 318
R+ + M +GC P++ TYH F + E +F +M++ G++P TY
Sbjct: 150 RIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYN 209
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+L+ FG+ G L F K +E YN+L+ +L KG + + +M AK
Sbjct: 210 ILIDAFGKTGQLERAFDFVGKSRSF---TNEVTYNSLLSSLGRKGDIQGLMELFGQMKAK 266
Query: 379 GL 380
GL
Sbjct: 267 GL 268
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 129/274 (47%), Gaps = 9/274 (3%)
Query: 18 FNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRY 77
F++V FT+ TYNS++ LG+ + L +MK + N T+ I+ +R
Sbjct: 225 FDFVGKSRSFTNEV-TYNSLLSSLGRKGDIQGLMELFGQMKAK-GLVSNELTYAILIERL 282
Query: 78 VTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGL 136
A V + + ++ + +K D V+ N++D L + V A EL +++ F GL
Sbjct: 283 GWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELF----QDMKFKGL 338
Query: 137 VEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKA 196
T YN+++ G + EM++ G ++ +Y+ + K A
Sbjct: 339 NA--DTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAA 396
Query: 197 VKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKL 256
+L+ EMK++G+ +VV+Y+++I G + D A+ ++REM+ GC P+ VT N +I
Sbjct: 397 TRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDC 456
Query: 257 LCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR 290
L GR A L EM GC +T R
Sbjct: 457 LIRAGRFGAAMEYLREMRDAGCQMGKVTKSLLVR 490
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 161/373 (43%), Gaps = 22/373 (5%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TY+S+I + K + + L+++ +P+H TF I+ A V EA
Sbjct: 64 TAYTYSSMIQVFMKGGDVQ-NGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNV 122
Query: 90 FNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIY 145
F + + + +V +Y L+ +L + +L F + Y
Sbjct: 123 FGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKL---------FESMTAQGCQPNLFTY 173
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
+ ++ + + + +++M ++G+ D +Y+I +D K+G+ +A + + K
Sbjct: 174 HSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERA---FDFVGK 230
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+ V YN+++ ++G + M ++ +M+ G + +T +I+ L GRV +
Sbjct: 231 SRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVED 290
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLR 322
+ + EM D++T + CL K + LF M G+ TY +L+
Sbjct: 291 VWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILIN 350
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
GR G L + +MEE GC+P+ YN L+ + L A + EM +G++
Sbjct: 351 GLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVA- 409
Query: 383 KPREELGTKLVQG 395
P + L++G
Sbjct: 410 -PNVVSYSSLIEG 421
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 92/187 (49%), Gaps = 3/187 (1%)
Query: 198 KLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLL 257
+L + M+K K+D +NT+I G + ++ A++ + G +P+ T +++I++
Sbjct: 16 RLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVF 75
Query: 258 CENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKM 314
+ G V+ + +M K VPD T++ L K E +F M + + P +
Sbjct: 76 MKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDV 135
Query: 315 DTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
TY +L+R G G + V +++ M GC P+ F Y++++ A G +D A ++
Sbjct: 136 YTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQ 195
Query: 375 MFAKGLS 381
M KGL
Sbjct: 196 MVQKGLQ 202
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 3/214 (1%)
Query: 158 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
+ + E M K D ++ + I ++ KA++ K+G + Y++
Sbjct: 11 YDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSS 70
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
+I+ V + +Y++M + P T N +I L + +V EA V +M K
Sbjct: 71 MIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLN 130
Query: 278 CVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
PDV TY R L + ++ LF+ M G +P + TY ++ FG G +
Sbjct: 131 VSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEAC 190
Query: 335 VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
++++M + G PD YN L+DA G L+ A
Sbjct: 191 DIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERA 224
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 157/353 (44%), Gaps = 37/353 (10%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS+ID L K E D + L MK S P+ T+ + + AM F +
Sbjct: 116 TYNSLIDGLCKNNEPDRAQELFEHMKSVECS-PSMVTYNTLLDGLFRTGKLERAMALFQE 174
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ + D C+ +VI Y++++ G
Sbjct: 175 MLDRRSHDMDDRCS--------PNVIT-------------------------YSVLIDGL 201
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K + + E E M RG D+ +Y+I +D +CK K A ++ +EM G ++
Sbjct: 202 CKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNL 261
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V YN+++ + + V A+ + R+M GC P+VVT T+I LC+ GRV++A A+LA+
Sbjct: 262 VTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLAD 321
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M KG PD++ Y+ L K ++ + L R + GI+P + TY ++ R
Sbjct: 322 MIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNR 381
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
L + ++ GC PD Y+ L+D L G +D A E M G A
Sbjct: 382 LDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDA 434
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 169/380 (44%), Gaps = 17/380 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPS--- 62
C N+ RA E F +++ + + TYN+++D L + + + + L M D S
Sbjct: 125 CKNNEPDRAQELFEHMKS-VECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDM 183
Query: 63 ---SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVI 118
PN T+ ++ A+ V++A+ + G D ++Y LVD LC+ V
Sbjct: 184 DDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVA 243
Query: 119 EAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
A E+ E + G + YN +L G + +M RG ++
Sbjct: 244 AAWEV-LREMLDAGC-----VPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVV 297
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+Y +D +CK G+ A + +M KG D++ YN +I + ++ VD ++ + R
Sbjct: 298 TYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRA 357
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP--- 295
G +P VVT ++VI LC + R+ EA +L + +GC PDVI Y L K
Sbjct: 358 VSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKV 417
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
E L++ M G + TY L+ + G + ++ +M +G P YN+L
Sbjct: 418 DEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSL 477
Query: 356 VDALIDKGMLDMARKYDEEM 375
+ L D LD A + EEM
Sbjct: 478 IKGLCDLNHLDEAIELVEEM 497
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 172/384 (44%), Gaps = 17/384 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C AN +A+E ++ + TY ++D L K + +W ++ M D +P
Sbjct: 202 CKANRVSQAVELLESMKAR-GCSPDVITYTILVDGLCKESKVAAAWEVLREMLD-AGCVP 259
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N T+ + A V++A+ + G + V+Y L+D LC+ V +A +
Sbjct: 260 NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAML 319
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
G L+ IYNM++ G K + G+ D+ +YS +
Sbjct: 320 ADMIDKGGTPDLM------IYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVI 373
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+C+S + +A +L +K +G DV+ Y+T+I + + VD A +Y M GC
Sbjct: 374 YGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCD 433
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--C-LEKPREILGL 301
VVT +T+I LC+ GRV EA+ +LA M + G P +TY+ + C L E + L
Sbjct: 434 ADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIEL 493
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL-----GCSPDEFAYNALV 356
+ M S P TY +L+ R + V+ ++ + G + D AY++L+
Sbjct: 494 VEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLI 553
Query: 357 DALIDKGMLDMARKYDEEMFAKGL 380
D L G + A Y +EM G+
Sbjct: 554 DGLCKAGRVAEALDYFQEMIDNGV 577
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 116/245 (47%), Gaps = 10/245 (4%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y +LRG+ + + + ++EM + +V ++ SI +D +CK+ + A++ ++ M+
Sbjct: 12 YAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQ 71
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
GI D V Y ++ + + +D A+ + EMR+ GC+P+VVT N++I LC+N
Sbjct: 72 GSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPD 131
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMI-------ESGIRPKM 314
A + M C P ++TY+ L K + LF M+ + P +
Sbjct: 132 RAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNV 191
Query: 315 DTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
TY +L+ + + + + M+ GCSPD Y LVD L + + A + E
Sbjct: 192 ITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLRE 251
Query: 375 MFAKG 379
M G
Sbjct: 252 MLDAG 256
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 132/329 (40%), Gaps = 52/329 (15%)
Query: 28 THTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAM 87
T TY ++ID L K + ++ M D + P+ + ++ A V+E++
Sbjct: 293 TPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGT-PDLMIYNMLINGLCKADQVDESI 351
Query: 88 GTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYN 146
+ G+K D V+Y +++ LC + EA L ++ +Y+
Sbjct: 352 ALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVI------LYS 405
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++ G K + + +E M G D+ +YS +D +CK+G+ +A L M +
Sbjct: 406 TLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRM 465
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN--------------- 251
G + YN++I+ + +D A+ + EM C PS VT N
Sbjct: 466 GTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSA 525
Query: 252 -------------------------TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
++I LC+ GRV EA EM G +PD ITY
Sbjct: 526 VVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYS 585
Query: 287 CFFRCLEKPREILGL----FDRMIESGIR 311
L+K +++ L D+M++ G R
Sbjct: 586 ILLEGLKKSKDLHELRHLVLDQMVQLGYR 614
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 10/216 (4%)
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
D+++Y+ + C+ G+ +A + + EM+ K + +V + +I + ++ A+R +
Sbjct: 8 DVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCF 67
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK- 294
R M+ G V ++ L + R+ +A A+L EM GC P+V+TY+ L K
Sbjct: 68 RAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKN 127
Query: 295 --PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL-------GC 345
P LF+ M P M TY LL R G L ++++M + C
Sbjct: 128 NEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRC 187
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
SP+ Y+ L+D L + A + E M A+G S
Sbjct: 188 SPNVITYSVLIDGLCKANRVSQAVELLESMKARGCS 223
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 62/156 (39%), Gaps = 5/156 (3%)
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EIL 299
CQP V T +++ C G + +A EM K VP+V L K + + L
Sbjct: 5 CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
F M SGI Y LL + L + +M + GC P+ YN+L+D L
Sbjct: 65 RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
D A++ E M K + P L+ G
Sbjct: 125 CKNNEPDRAQELFEHM--KSVECSPSMVTYNTLLDG 158
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 163/365 (44%), Gaps = 8/365 (2%)
Query: 15 LEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
++FF W ++ H T TY ++I L ++ W +I M NP + +
Sbjct: 107 MQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVV 166
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFS 134
+ A +V++A+ F ++ + N + + ++ E + E G
Sbjct: 167 RMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHC 226
Query: 135 GLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPW 194
T Y+ ++ + K+ + EM G+ Y++ + + K
Sbjct: 227 ----FPDTMTYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVH 282
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
A+ L++EM+ + + DV Y +IR +G + +D A + EM+ GC+P + N +I
Sbjct: 283 GALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMI 342
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL----EKPREILGLFDRMIESGI 310
L + GR+ +A + EM C+P V+TY+ + L + E+ F+RM ESGI
Sbjct: 343 NFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGI 402
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
P TY +L+ F + + ++ ++M+E G P AY +L+DAL D+A +
Sbjct: 403 SPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACE 462
Query: 371 YDEEM 375
+E+
Sbjct: 463 LFQEL 467
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 151/359 (42%), Gaps = 67/359 (18%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+ +++ E +N + T+ H T TY+++I K D + L++ MKDN P
Sbjct: 206 HEGQYEKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSAIQLLNEMKDNGMQ-PT 264
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKL-DEFGLKDEVSYCNLVDALCEYKHVIEA----- 120
+ ++ + + V+ A+ F ++ ++ D +Y L+ L + + EA
Sbjct: 265 TKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFY 324
Query: 121 ---QELCFGE----NKNVGFSG-----------LVEMNKTK------IYNMILRGWFKM- 155
+E C + N + F G EM + YN I++ F+
Sbjct: 325 EMQREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESK 384
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
S + ++E M + G+ +YSI +D CK+ + KA+ L +EM +KG AY
Sbjct: 385 SRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAY 444
Query: 216 NTVIRAVGVSEGVDFAMRVYREMRE----------------------------------- 240
++I A+G ++ D A +++E++E
Sbjct: 445 CSLIDALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNK 504
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL 299
+GC P V N ++ L G + EA + + M + GC+PD+ +Y+ L+K +++
Sbjct: 505 LGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLQKQEDLI 563
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 116/247 (46%), Gaps = 16/247 (6%)
Query: 138 EMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAV 197
E+ KT I + +F+ W K R + E D + +H ++++ + G+ WK +
Sbjct: 95 EIMKTDIGVNVKMQFFR--WAAKRRNY--EHDTSTYMALIHC----LEVVEQYGEMWKMI 146
Query: 198 KLYKEMKKKGI-KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKL 256
+ EM + I + + V+R +G ++ V A+ ++ +++ CQP+ N++I +
Sbjct: 147 Q---EMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIM 203
Query: 257 LCENGRVREAYAVLAEMPKKG-CVPDVITYHCFFRC---LEKPREILGLFDRMIESGIRP 312
L G+ + + + EM +G C PD +TY L + + L + M ++G++P
Sbjct: 204 LMHEGQYEKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSAIQLLNEMKDNGMQP 263
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
Y ML+ F + + ++++M C PD F Y L+ L G +D A +
Sbjct: 264 TTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFF 323
Query: 373 EEMFAKG 379
EM +G
Sbjct: 324 YEMQREG 330
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 158/344 (45%), Gaps = 13/344 (3%)
Query: 65 PNHATFRIMFKRYVTAHLV-NEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQE 122
P T+ ++ Y + N+ G F + G L DE +Y L+ C + E
Sbjct: 66 PTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLI-TCCRRGSLHEEAA 124
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
F + K++GF + YN +L + K + E EM+ G + +Y+
Sbjct: 125 AVFKDMKSMGF-----VPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNS 179
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ + G +A++L +M + GI +DV Y T++ + + AMRV+ EMR G
Sbjct: 180 LISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAG 239
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREIL 299
C+P++ T N +IK+ G+ E V E+ CVPD++T++ + E+
Sbjct: 240 CKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVS 299
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
G+F M +G P+ DTY L+ + R G ++K+M E G +PD YNA++ AL
Sbjct: 300 GVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAAL 359
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQSG 403
G+ + + K EM K KP E L+ +G++ G
Sbjct: 360 ARGGLWEQSEKIFAEM--KDGRCKPNELTYCSLLHAYANGKEIG 401
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 137/299 (45%), Gaps = 19/299 (6%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F DTYN++I + FD + ++ RM + P+ +T+ + L ++
Sbjct: 310 FVPERDTYNTLISAYSRCGSFDQAMDIYKRMLE-AGITPDLSTYNAVLAALARGGLWEQS 368
Query: 87 MGTFNKLDEFGLK-DEVSYCNLVDALCEYKHV----IEAQELCFGENKNVGFSGLVEMNK 141
F ++ + K +E++YC+L+ A K + A+E+C SG++E +
Sbjct: 369 EKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEIC---------SGVIEPHA 419
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
+ ++L K + + E+ ++G DL + + + I + K ++
Sbjct: 420 VLLKTLVLVNS-KCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILN 478
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
M + G + YN+++ SE + + V +E+ G +P ++ NTVI C NG
Sbjct: 479 FMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNG 538
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTY 317
R++EA + +EM + G VPDVITY+ F + + + MI+ G +P +TY
Sbjct: 539 RMKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTY 597
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 143/336 (42%), Gaps = 25/336 (7%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN+++D+ GK + ++ M+ N S P+ T+ + Y L+ EAM N+
Sbjct: 141 TYNALLDVYGKSRRTKEAMEVLREMEVNGCS-PSIVTYNSLISAYARDGLLKEAMELKNQ 199
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVG-------FSGLVEMNKTKI 144
+ E G+ D +Y L+ A + F E + G F+ L++M+
Sbjct: 200 MVEGGINLDVFTYTTLLSGFVRAGKDESAMRV-FAEMRAAGCKPNICTFNALIKMHGN-- 256
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
RG F + + +EE+ V D+ +++ + + ++G + ++KEMK
Sbjct: 257 -----RGKF-----AEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMK 306
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+ G + YNT+I A D AM +Y+ M E G P + T N V+ L G
Sbjct: 307 RAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWE 366
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
++ + AEM C P+ +TY +EI L L + + I P L+
Sbjct: 367 QSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLV 426
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ L V + +++ G SPD NA++
Sbjct: 427 LVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLS 462
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 4/205 (1%)
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
++ + ++ K GK A L ++ K G +DV AY ++I A + A+ V+++M E
Sbjct: 2 AVIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEE 61
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAE-MPKKGCVPDVITYHCFFRCLEKP---R 296
GC+P+++T N ++ + + G L E M G +PD TY+ C +
Sbjct: 62 EGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHE 121
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
E +F M G P TY LL +G+ + V ++ME GCSP YN+L+
Sbjct: 122 EAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLI 181
Query: 357 DALIDKGMLDMARKYDEEMFAKGLS 381
A G+L A + +M G++
Sbjct: 182 SAYARDGLLKEAMELKNQMVEGGIN 206
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 124/283 (43%), Gaps = 45/283 (15%)
Query: 164 FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI---- 219
++ K G D+++Y+ + +G+ +AV ++K+M+++G K ++ YN ++
Sbjct: 20 LLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYG 79
Query: 220 -------RAVGVSEGV-------------------------DFAMRVYREMREMGCQPSV 247
+ G+ EG+ + A V+++M+ MG P
Sbjct: 80 KMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDK 139
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDR 304
VT N ++ + ++ R +EA VL EM GC P ++TY+ + +E + L ++
Sbjct: 140 VTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQ 199
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
M+E GI + TY LL F R G V+ +M GC P+ +NAL+ ++G
Sbjct: 200 MVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGK 259
Query: 365 LDMARKYDEEMFAKGLSAKPR----EELGTKLVQGGLDGEQSG 403
K EE+ K P L Q G+D E SG
Sbjct: 260 FAEMMKVFEEI--KNSCCVPDIVTWNTLLAVFGQNGMDSEVSG 300
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 141/331 (42%), Gaps = 13/331 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N+++ + G+ D + + + +P T+ + Y ++AM + +
Sbjct: 281 TWNTLLAVFGQN-GMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKR 339
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ E G+ ++S N V A + E E F E K+ G + N+ Y +L +
Sbjct: 340 MLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKD----GRCKPNEL-TYCSLLHAY 394
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPW--KAVKLYKEMKKKGIKM 210
G+ EE+ GV++ H+ + ++ S +A + E+K+KG
Sbjct: 395 ANGKEIGRMLALAEEICS-GVIEP-HAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSP 452
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
D+ N ++ G + + M E G PS+ T N+++ + + + VL
Sbjct: 453 DLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVL 512
Query: 271 AEMPKKGCVPDVITYHC--FFRCLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
E+ KG PD I+Y+ F C + +E +F M ESG+ P + TY + +
Sbjct: 513 KEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAAD 572
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
V + M + GC P++ YN++VD
Sbjct: 573 SMFEDAIDVVRYMIKHGCKPNQNTYNSVVDG 603
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 154/339 (45%), Gaps = 12/339 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PN ++ I+ K E + + G + D V Y +VD LC+ + V EA +
Sbjct: 194 PNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHI 253
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + K G + Y ++ G + W + EM ++ DL ++S+
Sbjct: 254 -FCKMKGTGI-----LPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVL 307
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+DIMCK G+ +A + K M + G++ DV YNT++ + V A +V+ M G
Sbjct: 308 IDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGR 367
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILG 300
P V + + ++ C+ R+ EA + EM +G +PD ++Y+ L +P E
Sbjct: 368 MPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEE 427
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
LF M +G P + TY +LL + G+L +++ ME G PD YN ++D +
Sbjct: 428 LFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMC 487
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDG 399
G AR+ E+ KGL +P + T + G G
Sbjct: 488 KYGKFKDARELFAELSVKGL--QPNNWVCTPTIDGVCKG 524
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 168/370 (45%), Gaps = 33/370 (8%)
Query: 21 VETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTA 80
+ + + H T+ ++ D L F H + NP +P+ F +F V
Sbjct: 56 LHSSSSYRHKNRTFRNINDALSAFN---------HMVNTNP--LPSIVKFGELFSALVRM 104
Query: 81 HLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEM 139
+ +++ G+ D +S L++ C HV + GFS L ++
Sbjct: 105 KHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHV------------DYGFSVLGKI 152
Query: 140 NKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
K + ++ ++ G+ G+ E ++ M RG ++HSYSI + +C+ GK
Sbjct: 153 IKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKT 212
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
+ +KL + MK G + DVV YNT++ + V+ A+ ++ +M+ G P+VVT ++
Sbjct: 213 TEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSL 272
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGI 310
I L GR +EA+ +L EM +PD++ + + K E+ + M E G+
Sbjct: 273 IHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGV 332
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
P + TY L+ + + V++ M G PD F+++ LV+ +D A++
Sbjct: 333 EPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQ 392
Query: 371 YDEEMFAKGL 380
+EM +GL
Sbjct: 393 LFDEMTHRGL 402
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 130/256 (50%), Gaps = 14/256 (5%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TY S+I L + ++ L++ MK + +P+ F ++ V+EA
Sbjct: 265 TVVTYTSLIHGLRNLGRWKEAFGLLNEMKGG-NIMPDLVAFSVLIDIMCKEGEVSEARVI 323
Query: 90 FNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVE---MNKTKIY 145
+ E G++ +V +Y L++ C V+EA+++ F ++ M +
Sbjct: 324 LKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKV---------FEVMISKGRMPDVFSF 374
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
++++ G+ K + ++ ++EM RG++ D SY+ + +C++ +P +A +L+K+M
Sbjct: 375 SILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHS 434
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G ++V Y+ ++ + +D AM ++R M G +P +VT N +I +C+ G+ ++
Sbjct: 435 NGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKD 494
Query: 266 AYAVLAEMPKKGCVPD 281
A + AE+ KG P+
Sbjct: 495 ARELFAELSVKGLQPN 510
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 123/271 (45%), Gaps = 9/271 (3%)
Query: 11 WKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
WK A N ++ + ++ +IDI+ K E + ++ M + P+ AT+
Sbjct: 282 WKEAFGLLNEMKGG-NIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVE-PDVATY 339
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENK 129
+ Y V EA F + G + D S+ LV+ C+ K + EA++L F E
Sbjct: 340 NTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQL-FDEMT 398
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
+ G + T YN ++ G + + E +++M G +L +YSI +D + K
Sbjct: 399 HRGL-----IPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSK 453
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
G +A+ L++ M+ G+K D+V YN +I + A ++ E+ G QP+
Sbjct: 454 QGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWV 513
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVP 280
C I +C+ G + EA+ +M K C P
Sbjct: 514 CTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544
>gi|224149779|ref|XP_002336862.1| predicted protein [Populus trichocarpa]
gi|222837029|gb|EEE75408.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 134/249 (53%), Gaps = 9/249 (3%)
Query: 13 RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
+ L FFNW F + + +N ++D GK FDL+W++I MK I TF I
Sbjct: 129 QVLAFFNWASYQDGFDKSPEAFNEMVDFAGKVRMFDLAWHVIDLMKARDVEI-TVETFSI 187
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNV 131
+ +RYV A L EA+ FN+++++ K D++++ L+ LC + EAQE F K+
Sbjct: 188 LMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRKRRASEAQEF-FDSLKDK 246
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
++ +Y ++RGW + + + EM G+ ++++YSI +D +C+ G
Sbjct: 247 FEPDVI------VYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCG 300
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
+ +A ++ EM G + + + YN+++R + + ++VY +M+ +GC+P VT N
Sbjct: 301 QITRAHDVFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYN 360
Query: 252 TVIKLLCEN 260
+I+ C++
Sbjct: 361 FLIETHCKD 369
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 33/216 (15%)
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
+ +++++R + + + + M+ D ++SI + I+C+ + +A + +
Sbjct: 183 ETFSILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRKRRASEAQEFFDS 242
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
+K K + DV+ Y ++R + + A RV+ EM+ G +P+V T + VI LC G+
Sbjct: 243 LKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQ 301
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLR 322
+ A+ V AEM GC P+ ITY+ L+R
Sbjct: 302 ITRAHDVFAEMLDAGCQPNSITYNS--------------------------------LMR 329
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+ G V V+ +M+ LGC PD YN L++
Sbjct: 330 IHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIET 365
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 7/173 (4%)
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
W + L MK + +++ V ++ ++R + A+ + M + C+P + + +
Sbjct: 167 WHVIDL---MKARDVEITVETFSILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSIL 223
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGI 310
I +LC R EA + K PDVI Y R C E +F M +GI
Sbjct: 224 ISILCRKRRASEAQEFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGI 282
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
+P + TY +++ R G + V+ +M + GC P+ YN+L+ + G
Sbjct: 283 KPNVYTYSIVIDSLCRCGQITRAHDVFAEMLDAGCQPNSITYNSLMRIHVKAG 335
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+ D M + ++T+ +L+R++ R G + +ME+ C PD+ A++ L+ L
Sbjct: 169 VIDLMKARDVEITVETFSILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILC 228
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
K A+++ + + K +P + T LV+G
Sbjct: 229 RKRRASEAQEFFDSLKDK---FEPDVIVYTNLVRG 260
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 168/381 (44%), Gaps = 23/381 (6%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A+ +RA + D T TY+ ++D K D + L+H M P
Sbjct: 406 CKADKMERAHAMIESM-VDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASR-GCTP 463
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-----DEVSYCNLVDALCEYKHVIEA 120
N TF + + EA F D+ LK D+++YC L+D L +A
Sbjct: 464 NVVTFNSIIDGLCKSDRSGEA---FQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQA 520
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+ L + + + T +N + G K+ + + + M + +V D ++
Sbjct: 521 EAL---------LDAMPDPD-TYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTF 570
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+I + CK+G +A L++EM K ++ DV+ + +I + + V+ A + M
Sbjct: 571 NILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 630
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPRE 297
+G P+VVT N ++ LC++GR+ EA L EM GCVPD ITY L + +
Sbjct: 631 LGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDD 690
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
L L + G P TY +L+ + G V ++M G PD YN L+D
Sbjct: 691 ALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLID 750
Query: 358 ALIDKGMLDMARKYDEEMFAK 378
+L G L+ AR+ +M ++
Sbjct: 751 SLCKAGDLEEARRLHGDMSSR 771
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 172/384 (44%), Gaps = 21/384 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C +N+ +E F + H TYN++ID L K + + + L H + S +P
Sbjct: 227 CKSNELGAGMELFEELVERGHHPDVV-TYNTLIDSLCKAGDLEEARRL-HGDMSSRSCVP 284
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG---LKDEVSYCNLVDALCEYKHVIEAQE 122
N T+ ++ ++EA ++ L + ++Y + +D LC+ EA E
Sbjct: 285 NVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACE 344
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L +++ L T ++ ++ G K + +++M G V ++ +Y+
Sbjct: 345 L----MRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNA 400
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ +CK+ K +A + + M KG+ DV+ Y+ ++ A + VD A+ + M G
Sbjct: 401 LVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRG 460
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMP-KKGCVPDVITYHCFFRCL---EKPREI 298
C P+VVT N++I LC++ R EA+ + +M K G VPD ITY L + +
Sbjct: 461 CTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQA 520
Query: 299 LGLFDRMIESGIRPKMDTYVM--LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
L D M P DTY + + G + V+ +M EL PD+ +N L+
Sbjct: 521 EALLDAM------PDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILI 574
Query: 357 DALIDKGMLDMARKYDEEMFAKGL 380
G + A EEM AK L
Sbjct: 575 AGACKAGNFEQASALFEEMVAKNL 598
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 165/387 (42%), Gaps = 50/387 (12%)
Query: 16 EFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFK 75
+F++W F HT ++N +++L K + +L R + P PNH T+ + +
Sbjct: 96 QFYDWAAALPGFKHTIFSFNKYLNLLVKSGSPAKAIDLF-RSRLPPRCRPNHFTYSTLLR 154
Query: 76 -RYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFS 134
Y V +G F ++ + Y ++ +LC A E+ GE G +
Sbjct: 155 ATYKAGGDVERTLGFFRRIRSS-SRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVA 213
Query: 135 GLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPW 194
+ YN I+ G K + G E +EE+ +RG D+ +Y+ +D +CK+G
Sbjct: 214 PTI-----VTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLE 268
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC----------- 243
+A +L+ +M + +VV Y+ +I + +D A + +EM C
Sbjct: 269 EARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNS 328
Query: 244 ----------------------------QPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
P VT +T+I LC+ G++ EA +V +M
Sbjct: 329 FLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIA 388
Query: 276 KGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
G VP+VITY+ L +K + + M++ G+ P + TY +L+ F + +
Sbjct: 389 GGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDE 448
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDAL 359
+ M GC+P+ +N+++D L
Sbjct: 449 ALELLHGMASRGCTPNVVTFNSIIDGL 475
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 154/357 (43%), Gaps = 22/357 (6%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T T++++ID L K + D + ++ M +PN T+ + A + A
Sbjct: 360 TVTFSTLIDGLCKCGQIDEACSVFDDMIAG-GYVPNVITYNALVNGLCKADKMERAHAMI 418
Query: 91 NKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+ + G+ D ++Y LVDA C+ V EA EL G +V +N I+
Sbjct: 419 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVV------TFNSII 472
Query: 150 RGWFKMSWWGKCREFWEEMD-KRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
G K G+ + +++M K G+V D +Y +D + ++G+ +A L M
Sbjct: 473 DGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDP-- 530
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
D A+N I + V A++VY M E+ P VT N +I C+ G +A A
Sbjct: 531 --DTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASA 588
Query: 269 VLAEMPKKGCVPDVITYHCFFRCL------EKPREILGLFDRMIESGIRPKMDTYVMLLR 322
+ EM K PDV+T+ L E R+IL L + G+ P + TY L+
Sbjct: 589 LFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL---GVPPNVVTYNALVH 645
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ G + ++M GC PD Y +LV AL D A + E+ + G
Sbjct: 646 GLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFG 702
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 161/359 (44%), Gaps = 24/359 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPS--SIPNHATFRIMFKRYVTAHLVNEAMGTF 90
TYN++ID L K + + + L M S +PN T+ ++ ++EA
Sbjct: 744 TYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELI 803
Query: 91 NKLDEFG---LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
++ L + ++Y + +D LC+ + EA EL +++ L T ++
Sbjct: 804 QEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACEL----MRSLRDGSLRVSPDTVTFST 859
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++ G K + +++M G V ++ +Y++ M+ +CK+ K +A + + M KG
Sbjct: 860 LIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKG 919
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ DV+ Y+ ++ A + VD A+ + M GC P+VVT N++I LC++ + EA+
Sbjct: 920 VTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAF 979
Query: 268 AVLAEMP-KKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVM--LL 321
+ +M K G PD ITY L + + L D M P DTY +
Sbjct: 980 QMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAM------PDPDTYAFNCCI 1033
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ G V +M EL PD+ +N L+ G + A EEM AK L
Sbjct: 1034 NGLSKLG---DVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNL 1089
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 126/245 (51%), Gaps = 8/245 (3%)
Query: 145 YNMILRGWFKMSWWGKCRE-FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
YN++L+ + + E F EM + GV + +Y+ ++ +CKS + ++L++E+
Sbjct: 183 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 242
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
++G DVV YNT+I ++ + ++ A R++ +M C P+VVT + +I LC+ GR+
Sbjct: 243 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRI 302
Query: 264 REAYAVLAEMPKKGC--VPDVITYHCFFRCLEKPR---EILGLFDRMIESGIR--PKMDT 316
EA ++ EM +K C +P++ITY+ F L K E L + + +R P T
Sbjct: 303 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 362
Query: 317 YVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
+ L+ + G + V+ M G P+ YNALV+ L ++ A E M
Sbjct: 363 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 422
Query: 377 AKGLS 381
KG++
Sbjct: 423 DKGVT 427
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 172/398 (43%), Gaps = 55/398 (13%)
Query: 32 DTY--NSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
DTY N I+ L K + + + +RM + +P+ TF I+ A +A
Sbjct: 531 DTYAFNCCINGLSKLGDVSRALQVYNRMLE-LELVPDKVTFNILIAGACKAGNFEQASAL 589
Query: 90 FNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
F ++ L+ +V ++ L+D LC+ V A+++ N+G V YN +
Sbjct: 590 FEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDI-LDLMGNLGVPPNV-----VTYNAL 643
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKD-------------------------------- 176
+ G K + +F EEM G V D
Sbjct: 644 VHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGW 703
Query: 177 ---LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMR 233
+Y+I +D + KSG+ +A+ + +EM KG DVV YNT+I ++ + ++ A R
Sbjct: 704 DPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARR 763
Query: 234 VYREMREM---GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGC--VPDVITYHCF 288
++ +M C P+VVT + +I LC+ GR+ EA ++ EM +K C +P++ITY+ F
Sbjct: 764 LHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSF 823
Query: 289 FRCLEKPR---EILGLFDRMIESGIR--PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
L K E L + + +R P T+ L+ + G V+ M
Sbjct: 824 LDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAG 883
Query: 344 GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G P+ YN L++ L ++ A E M KG++
Sbjct: 884 GYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVT 921
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 5/212 (2%)
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
+ S++ Y++++ KSG P KA+ L++ + + Y+T++RA G D +
Sbjct: 111 IFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRAT-YKAGGDVERTLGF 169
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL-AEMPKKGCVPDVITYHCFFRCLEKP 295
R SV N V++ LC G A + EM + G P ++TY+ L K
Sbjct: 170 FRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKS 229
Query: 296 REI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
E+ + LF+ ++E G P + TY L+ + G L + M C P+ Y
Sbjct: 230 NELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTY 289
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
+ L++ L G +D AR+ +EM K P
Sbjct: 290 SVLINGLCKVGRIDEARELIQEMTRKSCDVLP 321
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 110/271 (40%), Gaps = 39/271 (14%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T T++++ID L K + D + N+ M +PN T+ ++ + A
Sbjct: 854 TVTFSTLIDGLCKCGQTDEACNVFDDMIAG-GYVPNVVTYNVLMNGLCKTDKMERAHAMI 912
Query: 91 NKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENK----------NVGFSGLVEM 139
+ + G+ D ++Y LVDA C+ HV EA EL G N GL +
Sbjct: 913 ESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKS 972
Query: 140 NKTK--------------------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
+++ Y ++ G F+ W G+ + M D ++
Sbjct: 973 DQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPD----PDTYA 1028
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
++ ++ + K G +A+ E++ + D V +N +I + + A ++ EM
Sbjct: 1029 FNCCINGLSKLGDVSRALHRMLELE---LVPDKVTFNILIAGACKAGNFEQASALFEEMV 1085
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
QP V+T +I LC+ G+V + ++
Sbjct: 1086 AKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 173/405 (42%), Gaps = 42/405 (10%)
Query: 24 DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLV 83
+C TYN ++ + D + L ++ + PN AT+ + + A +
Sbjct: 292 ECDNFPDIQTYNILVAGFSRANRLDDALELF-KLLSSYGCKPNAATYTTIIQGLYDAQRM 350
Query: 84 NEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFS--------- 134
EA F++ D +SY ++ L + K + EA EL F + K G S
Sbjct: 351 EEAKAFFDEA-----LDVISYTTVIKGLADSKRIDEACEL-FEKLKTAGCSPNVVAYTAV 404
Query: 135 --GLVEMNKTK-------------------IYNMILRGWFKMSWWGKCREFWEEMDKRGV 173
GL++ + + Y +++ G K + +E+M ++G
Sbjct: 405 IDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGC 464
Query: 174 VKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMR 233
V D +Y+ +D K+ K +A KL M KG + V Y +++ + ++ A
Sbjct: 465 VPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKE 524
Query: 234 VYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL- 292
V +MRE GC+P + +++ GR EAY VL EM +GC PDVI Y L
Sbjct: 525 VIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLF 584
Query: 293 --EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF 350
+ E +FD MIE G P TY +++ F + G + + + M + G PD F
Sbjct: 585 STGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCF 644
Query: 351 AYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
AYN+L+D + +D A + M A G+ KP L+ G
Sbjct: 645 AYNSLMDGYVKLERVDQAFGVYDRMVASGI--KPNAVTFNVLMHG 687
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 184/432 (42%), Gaps = 53/432 (12%)
Query: 10 DWKR---ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
D KR A E F ++T + Y +VID L K + M + S +P
Sbjct: 375 DSKRIDEACELFEKLKT-AGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGS-SCVPT 432
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCF 125
T+ ++ A ++ +A F ++ + G + D ++Y L+D + + EA++L
Sbjct: 433 RTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLL- 491
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
+V + E Y I+ G+ K+ + +E +M +RG L ++ +
Sbjct: 492 ----DVMLTKGPEPTAVT-YGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLS 546
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
G+ +A ++ EM +G DV+ Y ++I + + V A V+ M E GC P
Sbjct: 547 YYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAP 606
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLF 302
+T T+I+ + G V A +L M K G PD Y+ + LE+ + G++
Sbjct: 607 DALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVY 666
Query: 303 DRMIESGIRP----------------KMD--------------------TYVMLLRKFGR 326
DRM+ SGI+P K D +Y +L+ G+
Sbjct: 667 DRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGK 726
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPRE 386
G + F +++M + G P+ Y +L+ +L G + A+K E+M G++ P
Sbjct: 727 AGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVN--PDV 784
Query: 387 ELGTKLVQGGLD 398
+ + L+ G +D
Sbjct: 785 QAYSALITGLID 796
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 156/373 (41%), Gaps = 24/373 (6%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKR 76
F V+ C T TY ++ID K + D + L+ M P T+ +
Sbjct: 456 FEQMVQKGC--VPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPE-PTAVTYGSIVHG 512
Query: 77 YVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGL 136
+ ++NEA ++ E G E L Y A+E + L
Sbjct: 513 FCKLDMINEAKEVIAQMRERGC--EPGLFIFTSLLSYYLSKGRAEE---------AYQVL 561
Query: 137 VEMNK------TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS 190
EM +Y ++ F + R ++ M ++G D +Y + K
Sbjct: 562 TEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKI 621
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTC 250
G A ++ + M K G+ D AYN+++ E VD A VY M G +P+ VT
Sbjct: 622 GNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTF 681
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCV-PDVITYHCFFRCLEKP---REILGLFDRMI 306
N ++ L ++G+ A+++ EM +K V P +++Y L K E F MI
Sbjct: 682 NVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMI 741
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
+ GI P+ TY L+ + G + + + M +LG +PD AY+AL+ LID M+D
Sbjct: 742 DRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVD 801
Query: 367 MARKYDEEMFAKG 379
A +EM +G
Sbjct: 802 TAWDVFQEMMKRG 814
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 113/234 (48%), Gaps = 3/234 (1%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+Y ++ G+ K + EEM G + D +Y + +D +CK G+ +A +L++ M
Sbjct: 126 LYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERM 185
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
+K G D V + T+I A+ +D A +YREM E G +P + +++I LC+ G+V
Sbjct: 186 RKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKV 245
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFR--C-LEKPREILGLFDRMIESGIRPKMDTYVML 320
EA + + K + Y+ C L + + L L +M+E P + TY +L
Sbjct: 246 DEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNIL 305
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
+ F R L ++K + GC P+ Y ++ L D ++ A+ + +E
Sbjct: 306 VAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDE 359
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 153/369 (41%), Gaps = 23/369 (6%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TY S++ K + + +I +M++ P F + Y++ EA
Sbjct: 502 TAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCE-PGLFIFTSLLSYYLSKGRAEEAYQV 560
Query: 90 FNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIY 145
++ G D + Y +L+D L V EA+ + F ++E Y
Sbjct: 561 LTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHV---------FDSMIEKGCAPDALTY 611
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
I++ + K+ E E M K GV D +Y+ MD K + +A +Y M
Sbjct: 612 GTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVA 671
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG-CQPSVVTCNTVIKLLCENGRVR 264
GIK + V +N ++ + D A +++EM E P++V+ +I L + GRV
Sbjct: 672 SGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVS 731
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLL 321
EA++ EM +G +P+ TY L K I L + M++ G+ P + Y L+
Sbjct: 732 EAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALI 791
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ + V+++M + GC+P+E Y L +G R D E + S
Sbjct: 792 TGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL-----RRGFRAAGRALDLEAVKQHFS 846
Query: 382 AKPREELGT 390
E G+
Sbjct: 847 QGVAMEAGS 855
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 128/288 (44%), Gaps = 11/288 (3%)
Query: 83 VNEAMGTFNKLDEFGLKDEVSYCNLV-DALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
+ EA+ ++ GL +V CN+V + LC+ + + +A EL F E ++G +
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIEL-FLEMPSMGCEPTIVS-- 57
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
YN ++ G + + +F+ M G D+ +++ + CK+G+P L
Sbjct: 58 ---YNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLN 114
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
+ K+ + DV Y +VI + +D ++ EM GC P +I LC+ G
Sbjct: 115 QALKR-FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLG 173
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLE---KPREILGLFDRMIESGIRPKMDTYV 318
RV EAY + M K GC+ D +T+ L K E L+ MIE G P ++
Sbjct: 174 RVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQD 233
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
L+ + G + +++ + + AYN+L+D G +D
Sbjct: 234 SLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVD 281
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 161/380 (42%), Gaps = 42/380 (11%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
Y SVI K + D + ++ M IP+ A + ++ V+EA F ++
Sbjct: 127 YTSVIHGYCKAGDLDTGFKILEEML-AAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERM 185
Query: 94 DEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI-------- 144
+ G L D V++ L++AL + + EA EL + E G+ +E+ + I
Sbjct: 186 RKSGCLGDYVTFMTLIEALSNHGKLDEACEL-YREMIERGYEPYLEVQDSLIFALCKAGK 244
Query: 145 ----------------------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
YN ++ G+ K+ + +M + D+ +Y+I
Sbjct: 245 VDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNI 304
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ ++ + A++L+K + G K + Y T+I+ + ++ ++ A + E +
Sbjct: 305 LVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALD-- 362
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---L 299
V++ TVIK L ++ R+ EA + ++ GC P+V+ Y L K I L
Sbjct: 363 ----VISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGL 418
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
F+ M S P TY +++ + L V+++M + GC PD Y L+D
Sbjct: 419 KNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGF 478
Query: 360 IDKGMLDMARKYDEEMFAKG 379
+D ARK + M KG
Sbjct: 479 SKASKMDEARKLLDVMLTKG 498
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 112/218 (51%), Gaps = 4/218 (1%)
Query: 165 WEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGV 224
+EM G++ D+ + +I ++ +CK+ K KA++L+ EM G + +V+YNTVI +
Sbjct: 8 LKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLAS 67
Query: 225 SEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
+ +D A + + M + GC+P V+ T+I C+ G+ + + +L + K+ PDV
Sbjct: 68 IDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR-FRPDVFL 126
Query: 285 YHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKME 341
Y K ++ + + M+ +G P Y +L+ + G + + ++++M
Sbjct: 127 YTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMR 186
Query: 342 ELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ GC D + L++AL + G LD A + EM +G
Sbjct: 187 KSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERG 224
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 6/189 (3%)
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
+A+ KEM G+ DVV N V+ + + +D A+ ++ EM MGC+P++V+ NTVI
Sbjct: 3 EALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVI 62
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITY----HCFFRCLEKPREILGLFDRMIESGI 310
L ++ EAY M GC PDVI + H F + +P+ L ++ ++
Sbjct: 63 SGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKA-GQPQVGHMLLNQALKR-F 120
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
RP + Y ++ + + G L F + ++M GC PD AY L+D L G +D A +
Sbjct: 121 RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYE 180
Query: 371 YDEEMFAKG 379
E M G
Sbjct: 181 LFERMRKSG 189
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 188/402 (46%), Gaps = 48/402 (11%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN +ID+L K E + + + MK+ PN T IM R A ++EA F
Sbjct: 414 TYNILIDMLCKAGELEAALKVQDTMKE-AGLFPNIMTVNIMIDRLCKAQKLDEACSIFLG 472
Query: 93 LD-EFGLKDEVSYCNLVDALCEYKHVIEAQELC-----FGENKNVG-FSGLVEM------ 139
LD + D ++C+L+D L V +A L + NV ++ L++
Sbjct: 473 LDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGR 532
Query: 140 --NKTKIYN-MILRGW--------------FKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ KIY M+ RG FK K R +EE+ +G+V D+ SYSI
Sbjct: 533 KEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSI 592
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ + K+G + KL+ EMK++G+ +DV+AYNTVI S VD A ++ EM+ G
Sbjct: 593 LIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKG 652
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREIL 299
QP+VVT +V+ L + R+ EAY + E G +V+ Y F + + E
Sbjct: 653 LQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAY 712
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ + +++ G+ P T+ LL + + V ++ M+ L CSP+ Y+ +++ L
Sbjct: 713 LILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGL 772
Query: 360 IDKGMLDMARKYD------EEMFAKGLSAKPREELGTKLVQG 395
M RK++ +EM +GL KP T ++ G
Sbjct: 773 C------MIRKFNKAFVFWQEMQKQGL--KPNNITYTTMIAG 806
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 157/363 (43%), Gaps = 12/363 (3%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D A ++F WVE H + YN+ + ++ + D ++ M + NH +
Sbjct: 112 DVNVAFQYFRWVERKTQQAHCPEVYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVS 171
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGEN 128
++ +V +H + EA G + +F + S Y L+ AL L F +
Sbjct: 172 VELV-ASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTL-FHQM 229
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
+ +G+ V + + ++R + + +EM DL Y++ +D
Sbjct: 230 QEIGYEANVHL-----FTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFG 284
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
K GK A K + EMK +G+ D V Y T+I + + +D A+ ++ E+ P V
Sbjct: 285 KVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVY 344
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRM 305
NT+I G+ EAY++L +KGC+P VI Y+C CL K E L + D M
Sbjct: 345 AYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM 404
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
+ P + TY +L+ + G L V M+E G P+ N ++D L L
Sbjct: 405 RQDAA-PNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKL 463
Query: 366 DMA 368
D A
Sbjct: 464 DEA 466
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 176/410 (42%), Gaps = 54/410 (13%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
AL + ++++ FT YN ID GK + D++W H MK +P+ T+ +
Sbjct: 257 ALSLLDEMKSN-SFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQ-GLVPDDVTYTTL 314
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEV----SYCNLVDALCEYKHVIEAQELCFGENK 129
A ++EA+ F +LD L V +Y ++ EA L + +
Sbjct: 315 IGVLCKARRLDEAVELFEELD---LNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKR 371
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
++ YN IL + + +EM ++ +L +Y+I +D++CK
Sbjct: 372 KGCIPSVIA------YNCILTCLGRKGKVEEALRIHDEM-RQDAAPNLTTYNILIDMLCK 424
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
+G+ A+K+ MK+ G+ +++ N +I + ++ +D A ++ + C P T
Sbjct: 425 AGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRT 484
Query: 250 CNTVIKLLCENGRVREAYA-----------------------------------VLAEMP 274
++I L GRV +AY+ + EM
Sbjct: 485 FCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMV 544
Query: 275 KKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
+GC PD++ + + C+ K E+ LF+ + G+ P + +Y +L+ + GF R
Sbjct: 545 HRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSR 604
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ ++ +M+E G D AYN ++D G +D A + EEM KGL
Sbjct: 605 ETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQ 654
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 149/338 (44%), Gaps = 11/338 (3%)
Query: 35 NSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLD 94
NS +D + K E + L +K +P+ ++ I+ V A E F ++
Sbjct: 556 NSYMDCVFKAGEVEKGRALFEEIKAQ-GLVPDVRSYSILIHGLVKAGFSRETYKLFYEMK 614
Query: 95 EFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWF 153
E GL D ++Y ++D C+ V +A +L E K G V Y ++ G
Sbjct: 615 EQGLHLDVLAYNTVIDGFCKSGKVDKAYQL-LEEMKTKGLQPTV-----VTYGSVVDGLA 668
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
K+ + +EE GV ++ YS +D K G+ +A + +E+ +KG+ +
Sbjct: 669 KIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSY 728
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
+N ++ A+ +E +D A ++ M+ + C P+ +T + +I LC + +A+ EM
Sbjct: 729 TWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEM 788
Query: 274 PKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
K+G P+ ITY L K ++ GLFDR SG P Y ++
Sbjct: 789 QKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKA 848
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
++V+++ GC + L+DAL L+ A
Sbjct: 849 MDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQA 886
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 121/274 (44%), Gaps = 12/274 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + +A + ++T T TY SV+D L K D ++ L K +
Sbjct: 633 CKSGKVDKAYQLLEEMKTK-GLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDL- 690
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N + + + ++EA +L + GL + ++ L+DAL + + + EAQ +C
Sbjct: 691 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQ-VC 749
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F KN+ S Y++++ G + + K FW+EM K+G+ + +Y+ +
Sbjct: 750 FQNMKNLKCS-----PNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMI 804
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ K+G +A L+ K G D YN +I + + A V+ E R GC+
Sbjct: 805 AGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCR 864
Query: 245 PSVVTCNTVIKLLCENGRVREAY---AVLAEMPK 275
+ TC ++ L + + +A AVL EM K
Sbjct: 865 VNSKTCVVLLDALHKADCLEQAAIVGAVLREMAK 898
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 138/301 (45%), Gaps = 11/301 (3%)
Query: 50 SWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLV 108
++ L + MK+ + A + + + + V++A ++ GL+ V +Y ++V
Sbjct: 606 TYKLFYEMKEQGLHLDVLA-YNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVV 664
Query: 109 DALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM 168
D L + + EA L F E K++G V++N IY+ ++ G+ K+ + EE+
Sbjct: 665 DGLAKIDRLDEAYML-FEEAKSIG----VDLNVV-IYSSLIDGFGKVGRIDEAYLILEEL 718
Query: 169 DKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV 228
++G+ + ++++ +D + K+ + +A ++ MK + + Y+ +I + +
Sbjct: 719 MQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKF 778
Query: 229 DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
+ A ++EM++ G +P+ +T T+I L + G V EA + G VPD Y+
Sbjct: 779 NKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAM 838
Query: 289 FRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
L + + +F+ G R T V+LL + L +V + E+
Sbjct: 839 IEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQAAIVGAVLREMAK 898
Query: 346 S 346
S
Sbjct: 899 S 899
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 3/169 (1%)
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
YN + + + +D+ ++ EM G S ++ ++ +++EA+ V+ M
Sbjct: 136 YNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMR 195
Query: 275 KKGCVPDVITYHCFFRCLE---KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
K P Y L +P +L LF +M E G + + L+R F R G +
Sbjct: 196 KFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRID 255
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ +M+ + D YN +D G +DMA K+ EM A+GL
Sbjct: 256 AALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGL 304
>gi|297795031|ref|XP_002865400.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311235|gb|EFH41659.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 675
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 167/369 (45%), Gaps = 16/369 (4%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILG--KFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
FFNW + + D+Y ++ LG KFF F + + R P+ I
Sbjct: 132 FFNWAIREPGVSKDVDSYCVILRALGRRKFFSFMMD---VLRGMVCEGVNPDLRCLTIAM 188
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGF 133
+V AH V A+ F + + +G+K S+ L+ LCE HV A + + + F
Sbjct: 189 DSFVRAHYVRRAIELFEESESYGVKCSTESFNALLRCLCERSHVSAANSVFNAKKGKIPF 248
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
YN+++ GW K+ + +EM + G V D SYS ++ + ++G+
Sbjct: 249 DSCS-------YNIMISGWSKLGEIEGMEKVLKEMVEGGFVPDCLSYSHLIEGLGRAGRI 301
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
+V+++ MK KG +D YN +I + D +MR YR M + C+P++ T + +
Sbjct: 302 NDSVEIFDNMKHKGSVLDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKL 361
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGI 310
+ L + +V +A + EM +G +P F + L P + ++ + ++G
Sbjct: 362 VSGLIKGRKVSDALEIFEEMLSRGILPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGC 421
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
R Y +LL++ R+G + VW +M+E G D Y +VD L G L+ A
Sbjct: 422 RISESAYKLLLKRLSRFGKCGMLLNVWDEMQECGYPSDVEVYEYIVDGLCIIGHLENAVL 481
Query: 371 YDEEMFAKG 379
EE KG
Sbjct: 482 VMEEAMRKG 490
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 103/240 (42%), Gaps = 6/240 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y +ILR + ++ + M GV DL +I MD ++ +A++L++E +
Sbjct: 149 YCVILRALGRRKFFSFMMDVLRGMVCEGVNPDLRCLTIAMDSFVRAHYVRRAIELFEESE 208
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP-SVVTCNTVIKLLCENGRV 263
G+K ++N ++R + V A V+ + G P + N +I + G +
Sbjct: 209 SYGVKCSTESFNALLRCLCERSHVSAANSVFNAKK--GKIPFDSCSYNIMISGWSKLGEI 266
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVML 320
VL EM + G VPD ++Y L + I + +FD M G + Y +
Sbjct: 267 EGMEKVLKEMVEGGFVPDCLSYSHLIEGLGRAGRINDSVEIFDNMKHKGSVLDANVYNAM 326
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ F +++M + C P+ Y+ LV LI + A + EEM ++G+
Sbjct: 327 ICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGI 386
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 64/141 (45%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y+ ++ G K E +EEM RG++ + ++ +C G P A+ +Y++ +
Sbjct: 358 YSKLVSGLIKGRKVSDALEIFEEMLSRGILPTTGLVTSFLKPLCSYGPPHAAMVIYQKSR 417
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K G ++ AY +++ + + V+ EM+E G V ++ LC G +
Sbjct: 418 KAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQECGYPSDVEVYEYIVDGLCIIGHLE 477
Query: 265 EAYAVLAEMPKKGCVPDVITY 285
A V+ E +KG P+ Y
Sbjct: 478 NAVLVMEEAMRKGFCPNRFVY 498
>gi|413938979|gb|AFW73530.1| ATP binding protein [Zea mays]
Length = 551
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 172/381 (45%), Gaps = 20/381 (5%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILG----KFFEFDLSWNLIHRMKDNPS-SIPN 66
K A FF W ++H TYN +IDIL K +F + N++ MK + S S+P
Sbjct: 123 KLAFRFFAWASQQDGYSHEPTTYNDIIDILSGTRYKSRQFGVLCNVLDHMKRHGSRSVPV 182
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCF 125
I+ + Y HL + + E N L+DA C+ V EA E F
Sbjct: 183 EGLLEIL-RAYTEKHLTHMRKLAKKRRVRMRTPPETDALNVLLDAFCKCGMVKEA-EAVF 240
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
G K + + Y+ + GW + K + EEM + + +Y ++
Sbjct: 241 GRVKRK------LLGNAETYSTLFFGWCRARDPKKAMKVLEEMIQMKHTPESFTYVAAIE 294
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMD---VVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
C +G +A +L++ M+ +G+ + Y+ +I A+ ++ ++ + +MR G
Sbjct: 295 SFCSAGLVSEARELFEFMRTEGLTVSSPTAKTYSIMIVALAKADRMEECFELLSDMRTCG 354
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EIL 299
C P V T +I+ +C GR+ AY VL EM + G PD++TY+CF L R + L
Sbjct: 355 CMPDVTTYKDLIEGMCLVGRLDAAYRVLDEMGRAGFPPDIVTYNCFLNVLCSLRNADDAL 414
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
L +RMIE+ P + TY ML+ F G +W +M++ GC Y ++ L
Sbjct: 415 ELCERMIEAHCEPSVHTYNMLMMMFFEMGEAHRALDIWLEMDKRGCQRAIDTYEIMIYGL 474
Query: 360 IDKGMLDMARKYDEEMFAKGL 380
D G + A +E+ + +
Sbjct: 475 FDCGETEYATALLDEVINRDM 495
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 104/244 (42%), Gaps = 22/244 (9%)
Query: 6 CYANDWKRALEFFNWVETD--CHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
C A A E F ++ T+ + T TY+ +I L K + + L+ M+
Sbjct: 297 CSAGLVSEARELFEFMRTEGLTVSSPTAKTYSIMIVALAKADRMEECFELLSDMR-TCGC 355
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG----LKDEVSYCNLVDALCEYKHVIE 119
+P+ T++ + + LV + LDE G D V+Y ++ LC ++ +
Sbjct: 356 MPDVTTYKDLIEGMC---LVGRLDAAYRVLDEMGRAGFPPDIVTYNCFLNVLCSLRNADD 412
Query: 120 AQELCFGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
A ELC ++E + YNM++ +F+M + + W EMDKRG +
Sbjct: 413 ALELC---------ERMIEAHCEPSVHTYNMLMMMFFEMGEAHRALDIWLEMDKRGCQRA 463
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
+ +Y I + + G+ A L E+ + +K+ ++ ++ + + R+
Sbjct: 464 IDTYEIMIYGLFDCGETEYATALLDEVINRDMKLSYKKFDAIMLRLSAVGNLGAIHRLSE 523
Query: 237 EMRE 240
MR+
Sbjct: 524 HMRK 527
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 159/358 (44%), Gaps = 50/358 (13%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PNH TF ++ + + + +A+ T + + FGL D V+Y L++A C + EA+ L
Sbjct: 202 PNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 261
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
K+ G+ T YN ++ + ++ W + + E M G DL +Y++
Sbjct: 262 LARMKKD----GVAPTRPT--YNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVL 315
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKM-DVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+C++GK +A +L EM++ G + DVV YNT+ A A+R+ EMRE G
Sbjct: 316 AAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKG 375
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL--- 299
+ ++VT N VIK LC++G + A L +M G PDVITY+ K I
Sbjct: 376 VKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAY 435
Query: 300 GLFDRMIESGIRPKMDTYVM------------------LLRKFGRWGFL----------- 330
L D M+ G+ K+DT+ + LL+ + GF+
Sbjct: 436 TLMDEMVRRGL--KLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMA 493
Query: 331 --------RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
P +W +M E +P YN L+ L G L A E+ KGL
Sbjct: 494 AYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGL 551
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 153/347 (44%), Gaps = 10/347 (2%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++++ + + L+ RMK + P T+ + Y + +A
Sbjct: 241 TYNTLLNAHCRKGMLGEARALLARMKKD-GVAPTRPTYNTLVSAYARLGWIKQATKVVEA 299
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G + ++ +Y L LC+ V EA L E + +G + YN +
Sbjct: 300 MTANGFEPDLWTYNVLAAGLCQAGKVDEAFRL-KDEMERLG----TLLPDVVTYNTLADA 354
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
FK EEM ++GV L +++I + +CK G+ A+ +M G+ D
Sbjct: 355 CFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPD 414
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V+ YNT+I A + + A + EM G + T NTV+ LC+ R EA +L
Sbjct: 415 VITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQ 474
Query: 272 EMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
P++G +PD ++Y K L L+D MIE + P + TY L++ R G
Sbjct: 475 SPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMG 534
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
L+ ++ E G PD+ YN ++ A +G L+ A ++ +M
Sbjct: 535 RLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKM 581
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 168/392 (42%), Gaps = 54/392 (13%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N VI L K E + + +++M D+ P+ T+ + + A + +A ++
Sbjct: 382 THNIVIKGLCKDGELEGALGCLNKMADD-GLAPDVITYNTLIHAHCKAGNIAKAYTLMDE 440
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQ--------------ELCFGE---------N 128
+ GLK D + ++ LC+ K EAQ E+ +G N
Sbjct: 441 MVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYN 500
Query: 129 KNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
EM + K+ YN +++G +M + + E+ ++G+V D +Y+I
Sbjct: 501 SEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNI 560
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ CK G A + + +M + K DVV NT++ + ++ +D A++++ E G
Sbjct: 561 IIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKG 620
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE---KPREIL 299
+ V+T NT+I+ +C++G V A A+M +G PD TY+ L + E
Sbjct: 621 KKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQ 680
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFV-------VWKKMEELGCSPDEF-- 350
+ ++ ESG L + L+P V K EE +P +
Sbjct: 681 NMLHKLAESGT----------LSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSAS 730
Query: 351 -AYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
AY LV+ L G A+ +EM KG+S
Sbjct: 731 EAYTKLVNGLCTSGQFKEAKAILDEMMQKGMS 762
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 193 PWKAVKLYKEMKKK-GIKMDVVAYNTVIRAVGVSEGVD--FAMRVYREMREMGCQPSVVT 249
P A +L ++++ ++ + A N V+ A+ S ++ +R + + P+ T
Sbjct: 147 PHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYT 206
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREILGLFD 303
N ++ C G + +A + L+ M G PD +TY HC L + R +L
Sbjct: 207 FNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLA--- 263
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
RM + G+ P TY L+ + R G+++ V + M G PD + YN L L G
Sbjct: 264 RMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAG 323
Query: 364 MLDMARKYDEEMFAKGLSAKPREELGTKL 392
+D A + +EM E LGT L
Sbjct: 324 KVDEAFRLKDEM----------ERLGTLL 342
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 103/254 (40%), Gaps = 7/254 (2%)
Query: 136 LVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVK-DLHSYSIYMDIMCKSGK-- 192
L + T + + L + ++ + + +R V+ L + + + + +S
Sbjct: 125 LGNLPSTPLADAALSAYSRLRLPHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTS 184
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
P ++ ++ + + + +N ++ + A+ M+ G P VT NT
Sbjct: 185 PQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNT 244
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESG 309
++ C G + EA A+LA M K G P TY+ + ++ + + M +G
Sbjct: 245 LLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANG 304
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC-SPDEFAYNALVDALIDKGMLDMA 368
P + TY +L + G + F + +ME LG PD YN L DA A
Sbjct: 305 FEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDA 364
Query: 369 RKYDEEMFAKGLSA 382
+ EEM KG+ A
Sbjct: 365 LRLLEEMREKGVKA 378
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 115/273 (42%), Gaps = 16/273 (5%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
T + TYN++I L + + + ++ + + +P+ T+ I+ Y + A
Sbjct: 516 LTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEK-GLVPDDTTYNIIIHAYCKEGDLENA 574
Query: 87 MGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK---T 142
NK+ E K +V CN L++ LC + +A +L F VE K
Sbjct: 575 FQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKL---------FESWVEKGKKVDV 625
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
YN +++ K F+ +M+ RG+ D +Y++ + + ++G+ +A + +
Sbjct: 626 ITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHK 685
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT-VIKLLCENG 261
+ + G + + +++ V E E Q S T ++ LC +G
Sbjct: 686 LAESGT-LSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSG 744
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
+ +EA A+L EM +KG D TY L K
Sbjct: 745 QFKEAKAILDEMMQKGMSVDSSTYITLMEGLVK 777
>gi|334183891|ref|NP_177483.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806278|sp|Q9FX35.2|PP117_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g73400, mitochondrial; Flags: Precursor
gi|332197336|gb|AEE35457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 568
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 166/380 (43%), Gaps = 18/380 (4%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILG----KFFEFDLSWNLIHRMKDNPSSIPNH 67
K A FF W H++H YN +IDIL K +F + +++ MK N ++
Sbjct: 140 KTAFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLV 199
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFG 126
+ ++Y +L + K + E++ N L+DALC+ V E + L
Sbjct: 200 DVLLEILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRR 259
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
V +N++ GW ++ K + EEM + G + +Y +D
Sbjct: 260 MRHRVKPDA-------NTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDT 312
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT---VIRAVGVSEGVDFAMRVYREMREMGC 243
C++G +A L+ M KG + T +I A+ ++ + + M GC
Sbjct: 313 FCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGC 372
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILG 300
P V T VI+ +C +V EAY L EM KG PD++TY+CF R L K E L
Sbjct: 373 LPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALK 432
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L+ RM+ES P + TY ML+ F F W +M++ C D Y A+++ L
Sbjct: 433 LYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLF 492
Query: 361 DKGMLDMARKYDEEMFAKGL 380
D A EE+ KGL
Sbjct: 493 DCHRAKEACFLLEEVVNKGL 512
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 138/318 (43%), Gaps = 13/318 (4%)
Query: 32 DTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
+ +N ++D L K L+ RM+ P+ TF ++F + +AM
Sbjct: 235 NAFNMLLDALCKCGLVKEGEALLRRMRHRVK--PDANTFNVLFFGWCRVRDPKKAMKLLE 292
Query: 92 KLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELC-FGENKNVGFSGLVEMNKTKIYNMIL 149
++ E G K E +YC +D C+ V EA +L F K S K + +++
Sbjct: 293 EMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPT----AKTFALMI 348
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
K +C E M G + D+ +Y ++ MC + K +A K EM KG
Sbjct: 349 VALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYP 408
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
D+V YN +R + + D A+++Y M E C PSV T N +I + E A+
Sbjct: 409 PDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNT 468
Query: 270 LAEMPKKGCVPDVITY----HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
EM K+ CV DV TY + F C + +E L + ++ G++ + L +
Sbjct: 469 WTEMDKRDCVQDVETYCAMINGLFDC-HRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLS 527
Query: 326 RWGFLRPVFVVWKKMEEL 343
G L+ + V + M++
Sbjct: 528 EVGNLKAIHKVSEHMKKF 545
>gi|195655361|gb|ACG47148.1| ATP binding protein [Zea mays]
Length = 551
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 172/381 (45%), Gaps = 20/381 (5%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILG----KFFEFDLSWNLIHRMKDNPS-SIPN 66
K A FF W ++H TYN +IDIL K +F + N++ MK + S S+P
Sbjct: 123 KLAFRFFAWASQQDGYSHEPTTYNDIIDILSGTRYKSRQFGVLCNVLDHMKRHGSRSVPV 182
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCF 125
I+ + Y HL + + E N L+DA C+ V EA E F
Sbjct: 183 EGLLEIL-RAYTEKHLTHMRKLAKKRRVRMRTPPETDALNVLLDAFCKCGMVKEA-EAVF 240
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
G K + + Y+ + GW + K + EEM + + +Y ++
Sbjct: 241 GRVKRK------LLGNAETYSTLFFGWCRARDPKKAMKVLEEMIQMKHTPESFTYVAAIE 294
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMD---VVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
C +G +A +L++ M+ +G+ + Y+ +I A+ ++ ++ + +MR G
Sbjct: 295 SFCSAGLVSEARELFEFMRTEGLTVSSPTAKTYSIMIVALAKADRMEECFELLSDMRTCG 354
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EIL 299
C P V T +I+ +C GR+ AY VL EM + G PD++TY+CF L R + L
Sbjct: 355 CMPDVTTYKDLIEGMCLVGRLDAAYRVLDEMGRAGFPPDIVTYNCFLNVLCSLRNADDAL 414
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
L +RMIE+ P + TY ML+ F G +W +M++ GC Y ++ L
Sbjct: 415 ELCERMIEAHCEPSVHTYNMLMMMFFEMGEAHRALDIWLEMDKRGCQRAIDTYEIMIYGL 474
Query: 360 IDKGMLDMARKYDEEMFAKGL 380
D G + A +E+ + +
Sbjct: 475 FDCGETEYATALLDEVINRDM 495
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 104/244 (42%), Gaps = 22/244 (9%)
Query: 6 CYANDWKRALEFFNWVETD--CHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
C A A E F ++ T+ + T TY+ +I L K + + L+ M+
Sbjct: 297 CSAGLVSEARELFEFMRTEGLTVSSPTAKTYSIMIVALAKADRMEECFELLSDMR-TCGC 355
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG----LKDEVSYCNLVDALCEYKHVIE 119
+P+ T++ + + LV + LDE G D V+Y ++ LC ++ +
Sbjct: 356 MPDVTTYKDLIEGMC---LVGRLDAAYRVLDEMGRAGFPPDIVTYNCFLNVLCSLRNADD 412
Query: 120 AQELCFGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
A ELC ++E + YNM++ +F+M + + W EMDKRG +
Sbjct: 413 ALELC---------ERMIEAHCEPSVHTYNMLMMMFFEMGEAHRALDIWLEMDKRGCQRA 463
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
+ +Y I + + G+ A L E+ + +K+ ++ ++ + + R+
Sbjct: 464 IDTYEIMIYGLFDCGETEYATALLDEVINRDMKLSYKKFDAIMLRLSAVGNLGAIHRLSE 523
Query: 237 EMRE 240
MR+
Sbjct: 524 HMRK 527
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 122/238 (51%), Gaps = 6/238 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN+++ G+ K G+ +D+ V D+ +Y+ + +C SGK +A+++ M
Sbjct: 175 YNVMISGYCK---AGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
++ DV+ Y +I A GV AM++ EMR+ GC P VVT N ++ +C+ GR+
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLL 321
EA L +MP GC P+VIT++ R + + L M+ G P + T+ +L+
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R G L + +KM + GC P+ +YN L+ + +D A +Y E M ++G
Sbjct: 352 NFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 177/394 (44%), Gaps = 17/394 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A + AL + + TYN+++ L + + ++ RM P
Sbjct: 183 CKAGEINNALSVLDRMSVSPDVV----TYNTILRSLCDSGKLKQAMEVLDRMLQR-DCYP 237
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ I+ + V +AM +++ + G D V+Y LV+ +C+ + EA +
Sbjct: 238 DVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
++ SG +N+ILR W + +M ++G + +++I +
Sbjct: 298 ----NDMPSSGC--QPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ +C+ G +A+ + ++M K G + + ++YN ++ + +D A+ M GC
Sbjct: 352 NFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGL 301
P +VT NT++ LC++G+V +A +L ++ KGC P +ITY+ L K + + L
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
D M ++P TY L+ R G + + + E +G P+ +N+++ L
Sbjct: 472 LDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCK 531
Query: 362 KGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
D A + M +G KP E T L++G
Sbjct: 532 TRQTDRAIDFLVYMINRG--CKPTETSYTILIEG 563
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 6/222 (2%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+F E M G V D+ + + C+ GK KA K+ + ++ G DV+ YN +I
Sbjct: 123 KFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGY 182
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
+ ++ A+ V + M P VVT NT+++ LC++G++++A VL M ++ C PDV
Sbjct: 183 CKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDV 239
Query: 283 ITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
ITY + + + L D M + G P + TY +L+ + G L
Sbjct: 240 ITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLND 299
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
M GC P+ +N ++ ++ G A K +M KG S
Sbjct: 300 MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 10/165 (6%)
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
++R + EG F M G P ++ C T+I+ C G+ R+A +L + G
Sbjct: 112 LVRTGELEEGFKF----LENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSG 167
Query: 278 CVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
VPDVITY+ K EI L + DRM + P + TY +LR G L+
Sbjct: 168 AVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAM 224
Query: 335 VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
V +M + C PD Y L++A + A K +EM +G
Sbjct: 225 EVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRG 269
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 119/252 (47%), Gaps = 8/252 (3%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F+ + T+N +I+ L + + +++ +M + PN ++ + + ++ A
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQ-PNSLSYNPLLHGFCKEKKMDRA 398
Query: 87 MGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
+ ++ G D V+Y ++ ALC+ V +A E+ + + G S ++ Y
Sbjct: 399 IEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI-LNQLSSKGCSPVL-----ITY 452
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N ++ G K GK + +EM + + D +YS + + + GK +A+K + E ++
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFER 512
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G++ + V +N+++ + + D A+ M GC+P+ + +I+ L G +E
Sbjct: 513 MGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKE 572
Query: 266 AYAVLAEMPKKG 277
A +L E+ KG
Sbjct: 573 ALELLNELCNKG 584
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 185/448 (41%), Gaps = 77/448 (17%)
Query: 4 LSCYANDWK--RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
L+C K +AL F ++ D TYN +I +L K + ++ + MK+
Sbjct: 243 LTCLGKKGKTDKALRIFEEMKRDA--MPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKE-A 299
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLD-EFGLKDEVSYCNLVDALCE------- 113
PN T IM R A ++EA F +D + D ++C+L+D L +
Sbjct: 300 GLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDA 359
Query: 114 ---YKHVIEAQEL---------------CFGENKNVGFSGLVEMNKTK------IYNMIL 149
Y+ +++A ++ C + K G EM ++ + N +
Sbjct: 360 YRIYERMLDADQIPNVVVYTSLIRNFFKC--DRKEDGHKMYKEMMRSGCSPDLMLLNTYM 417
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
FK K R +EE+ RG + D SYSI + + K+G + +LY MK +G
Sbjct: 418 DCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCV 477
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCE---------- 259
+D AYNTVI S V+ A ++ EM+ MG P+VVT +V+ L +
Sbjct: 478 LDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYML 537
Query: 260 -------------------------NGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
GRV EAY V+ EM +KG P+V T++C L K
Sbjct: 538 FEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVK 597
Query: 295 PREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFA 351
EI L F M + P TY +L+ + FV W++M++ G P+
Sbjct: 598 AEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTIT 657
Query: 352 YNALVDALIDKGMLDMARKYDEEMFAKG 379
Y A++ L G + A E A G
Sbjct: 658 YTAMISGLAKSGNVAQASSLFERFRASG 685
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 163/385 (42%), Gaps = 47/385 (12%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN ID GK + D++W H MK N +P+ T+ M A+ ++EA+ F ++
Sbjct: 134 YNVCIDCFGKVGKVDMAWKFFHEMKAN-GLVPDDVTYTSMMGVLCKANRLDEAVEIFEQM 192
Query: 94 DEF-GLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
++ + +Y ++ EA L + +V YN IL
Sbjct: 193 EQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVA------YNCILTCL 246
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K K +EEM KR + +L +Y+I + ++CK+G A K+ MK+ G+ +V
Sbjct: 247 GKKGKTDKALRIFEEM-KRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNV 305
Query: 213 VAYNTVI----------RAVGVSEGVDF-------------------------AMRVYRE 237
N +I A + EG+D+ A R+Y
Sbjct: 306 RTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYER 365
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
M + P+VV ++I+ + R + + + EM + GC PD++ + + C+ K E
Sbjct: 366 MLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGE 425
Query: 298 I---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
LF+ + G P +Y +L+ + GF R + ++ M++ GC D AYN
Sbjct: 426 TEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNT 485
Query: 355 LVDALIDKGMLDMARKYDEEMFAKG 379
++D G ++ A + EEM G
Sbjct: 486 VIDGFCKSGKVNKAYQLLEEMKTMG 510
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 146/320 (45%), Gaps = 16/320 (5%)
Query: 67 HATFRIMFKRYVTA----HLVNEA---MGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIE 119
H FR F Y T V E+ + FN++ E G + V + + + ++
Sbjct: 54 HFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVD 113
Query: 120 AQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
A E K+ F + + I G M+W +F+ EM G+V D +
Sbjct: 114 AALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAW-----KFFHEMKANGLVPDDVT 168
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y+ M ++CK+ + +AV+++++M++ AYNT+I G + D A + R
Sbjct: 169 YTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQR 228
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL 299
GC PSVV N ++ L + G+ +A + EM K+ +P++ TY+ L K +
Sbjct: 229 AKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEM-KRDAMPNLPTYNIIIGMLCKAGNVE 287
Query: 300 GLF---DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
F D M E+G+ P + T +++ + + L +++ M+ CSPD + +L+
Sbjct: 288 AAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLI 347
Query: 357 DALIDKGMLDMARKYDEEMF 376
D L +G +D A + E M
Sbjct: 348 DGLGKQGRVDDAYRIYERML 367
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 121/274 (44%), Gaps = 12/274 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + +A + ++T H T TY SV+D L K D ++ L K N +
Sbjct: 491 CKSGKVNKAYQLLEEMKTMGHHP-TVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIEL- 548
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELC 124
N + + + V+EA ++ + GL V N L+D L + + + EA +C
Sbjct: 549 NQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEAL-VC 607
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F K++ + Y +++ G K+ + K FW+EM K+G+ + +Y+ +
Sbjct: 608 FQSMKDLKCT-----PNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMI 662
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ KSG +A L++ + G D +YN +I + ++ A +++ E R GC
Sbjct: 663 SGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCS 722
Query: 245 PSVVTCNTVIKLLCENGRVREAY---AVLAEMPK 275
TC ++ L + + +A AVL E K
Sbjct: 723 IHTKTCVALLDALHKAECLEQAAIVGAVLRETAK 756
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 142/320 (44%), Gaps = 11/320 (3%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F T +Y+ +I L K ++ L + MKD + A + + + + VN+A
Sbjct: 441 FLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRA-YNTVIDGFCKSGKVNKA 499
Query: 87 MGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
++ G V +Y ++VD L + + EA L F E K+ G +E+N+ IY
Sbjct: 500 YQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYML-FEEAKSNG----IELNQV-IY 553
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
+ ++ G+ K+ + EEM ++G+ ++++++ +D + K+ + +A+ ++ MK
Sbjct: 554 SSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKD 613
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+ + Y +I + + A ++EM++ G +P+ +T +I L ++G V +
Sbjct: 614 LKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQ 673
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLR 322
A ++ G +PD +Y+ L L LF+ G T V LL
Sbjct: 674 ASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLD 733
Query: 323 KFGRWGFLRPVFVVWKKMEE 342
+ L +V + E
Sbjct: 734 ALHKAECLEQAAIVGAVLRE 753
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 86/194 (44%), Gaps = 3/194 (1%)
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
KS K +A L + M+ + AY T+I A+ D + ++ +M+E+G + +V
Sbjct: 38 KSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVH 97
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRM 305
T+I++ GRV A ++L EM D++ Y+ C K ++ F M
Sbjct: 98 LLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEM 157
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
+G+ P TY ++ + L ++++ME+ P +AYN ++ G
Sbjct: 158 KANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKF 217
Query: 366 DMARKYDEEMFAKG 379
D A E AKG
Sbjct: 218 DEAYSLLERQRAKG 231
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 66/155 (42%), Gaps = 3/155 (1%)
Query: 229 DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
D+ ++ EM G P+ TC ++ ++ ++ EA+ +L M P Y
Sbjct: 8 DYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTL 67
Query: 289 FRCLEKPRE---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
L + E +L LF++M E G + L+R F R G + + +M+
Sbjct: 68 IGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTF 127
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
D YN +D G +DMA K+ EM A GL
Sbjct: 128 DADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGL 162
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 181/379 (47%), Gaps = 15/379 (3%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSV-IDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
+W+RAL+ + W+ H S+ I LG+ + +++ ++ +R + + N+
Sbjct: 177 GEWERALQGYEWMVQQVHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQK--AGFGNN 234
Query: 68 A-TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQEL-C 124
+ M Y + EA+ F + + G K ++Y ++DA C V Q L
Sbjct: 235 VYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDA-CGKGGVDLKQALDI 293
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F E + G VE ++ +N ++ + W + + EM +RG+ +D+ +++ +
Sbjct: 294 FDEMQKEG----VEPDRI-TFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLI 348
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D +CK G+ A + M+ K I +VV Y+T+I G + A+ +Y +M+E G +
Sbjct: 349 DAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVR 408
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGL 301
P V+ NT+I + + GR +A +M + G DV+TY+ K ++ L
Sbjct: 409 PDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACL 468
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
FD+M G+ P + TY L+ + + G + V V+ + + G PD Y++L+D+
Sbjct: 469 FDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCK 528
Query: 362 KGMLDMARKYDEEMFAKGL 380
G+++ A +EM G+
Sbjct: 529 CGLVEDAVVLLQEMTQAGI 547
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 113/225 (50%), Gaps = 6/225 (2%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+ + K G ++++YS + +SG+ +A+K+++ MKK G K +++ YNT+I A
Sbjct: 221 DVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDAC 280
Query: 223 GVSEGVDF--AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVP 280
G GVD A+ ++ EM++ G +P +T N++I + G ++ V AEM ++G
Sbjct: 281 G-KGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQ 339
Query: 281 DVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVW 337
D+ T++ + K ++ + M I P + TY ++ +G+ G ++
Sbjct: 340 DIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLY 399
Query: 338 KKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
M+E G PD +YN L+D G D A ++M GL A
Sbjct: 400 HDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKA 444
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 147/325 (45%), Gaps = 31/325 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N++ID + K + +L+ +++ M+ S PN T+ M Y EA+ ++
Sbjct: 343 TFNTLIDAVCKGGQMELAASIMTTMRGKNIS-PNVVTYSTMIDGYGKLGCFEEAISLYHD 401
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G++ D VSY L+D + +A C + + VG V YN ++
Sbjct: 402 MKESGVRPDRVSYNTLIDIYAKLGRFDDALIAC-KDMERVGLKADV-----VTYNALIDA 455
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K + +++M G+V ++ +YS +D K+G ++ E K+ G+K D
Sbjct: 456 YGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPD 515
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
VV Y+++I + V+ A+ + +EM + G QP++VT N++I G+ + AV A
Sbjct: 516 VVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKA 575
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPRE----------------ILGLFDRMIESGIRPKMD 315
MP R +E R+ + +F M + G++P +
Sbjct: 576 NMPNS-------VQKIGERSMEVVRKPPPSQQNASDHTGVLAAVSVFHEMQQFGLKPNVV 628
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKM 340
T+ +L R L+ V+ ++M
Sbjct: 629 TFSAILNACSRCASLQEASVLLEQM 653
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 161/395 (40%), Gaps = 65/395 (16%)
Query: 33 TYNSVIDILGKF-FEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
TYN++ID GK + + ++ M+ P+ TF + L ++ F
Sbjct: 272 TYNTIIDACGKGGVDLKQALDIFDEMQKEGVE-PDRITFNSLIAVCSRGGLWEDSQRVFA 330
Query: 92 KLDEFGLKDEV-SYCNLVDALCEYKHV-IEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
++ G++ ++ ++ L+DA+C+ + + A + KN+ Y+ ++
Sbjct: 331 EMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNIS-------PNVVTYSTMI 383
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G+ K+ + + + +M + GV D SY+ +DI K G+ A+ K+M++ G+K
Sbjct: 384 DGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLK 443
Query: 210 MDVVAYNTVIRAVGVS---------------EGV--------------------DFAMRV 234
DVV YN +I A G EG+ V
Sbjct: 444 ADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNV 503
Query: 235 YREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
+ E + G +P VV +++I C+ G V +A +L EM + G P+++TY+ +
Sbjct: 504 FTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGR 563
Query: 295 --------------PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
P + + +R +E +P G L V V+ +M
Sbjct: 564 YGQADKLEAVKANMPNSVQKIGERSMEVVRKPPPSQQ----NASDHTGVLAAV-SVFHEM 618
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
++ G P+ ++A+++A L A E+M
Sbjct: 619 QQFGLKPNVVTFSAILNACSRCASLQEASVLLEQM 653
>gi|357144169|ref|XP_003573197.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g43820-like [Brachypodium distachyon]
Length = 531
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 174/375 (46%), Gaps = 17/375 (4%)
Query: 15 LEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
++ F+W ++ + T N+VI LG+ F + + M+ N P+ T I+
Sbjct: 115 VDLFDWAISNAKLPPSLHTCNTVIRALGRRKFFASIEDALEIMRKN-GIFPDPTTLEIII 173
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGL------KDEVSYCNLVDALCEYKHVIEAQELCFGEN 128
V + +N A+ K D+FG +V++ L++ LC+ HV A L
Sbjct: 174 DSLVASRQINRAVQLL-KSDQFGFGFCQTCHRKVAFSALINCLCQRSHVGVASSLLQAAR 232
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
+ ++++K +YN ++ GW + K FW M + G+ D S+ ++ +
Sbjct: 233 GD-----HLDLDK-HVYNDVIGGWARFGRVDKLEHFWAMMLEDGLAPDEVSHCHLIEALG 286
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
++G+P + +K++++M +G AYN +I S +D ++ Y++M + C P+
Sbjct: 287 RAGQPEEGLKVFEKMVHEGYGPTTTAYNALIFNFISSGDLDRCIKYYKDMVDKNCPPNSA 346
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRM 305
T +I+ L RV +A + +M +G +P+ F L P L ++ +
Sbjct: 347 TYCKMIRALLRARRVADALQMFGDMFTRGVLPNTGDITLFIEPLCTYGPPHAALMIYRKS 406
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
++G + Y +LL + R+G V +W++M+E G D+ Y +V+ L + G L
Sbjct: 407 RKAGCTISLKAYKLLLARLARFGKSGIVLKIWEEMQESGHPSDKEIYEFIVNGLCNVGKL 466
Query: 366 DMARKYDEEMFAKGL 380
D A EE KG+
Sbjct: 467 DAAVSVVEESLMKGI 481
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 99/245 (40%), Gaps = 40/245 (16%)
Query: 88 GTFNKLDEF-------GL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEM 139
G +KL+ F GL DEVS+C+L++AL E ++ F + + G+
Sbjct: 254 GRVDKLEHFWAMMLEDGLAPDEVSHCHLIEALGRAGQPEEGLKV-FEKMVHEGYGPTTTA 312
Query: 140 NKTKIYNMI------------------------------LRGWFKMSWWGKCREFWEEMD 169
I+N I +R + + + +M
Sbjct: 313 YNALIFNFISSGDLDRCIKYYKDMVDKNCPPNSATYCKMIRALLRARRVADALQMFGDMF 372
Query: 170 KRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVD 229
RGV+ + +++++ +C G P A+ +Y++ +K G + + AY ++ +
Sbjct: 373 TRGVLPNTGDITLFIEPLCTYGPPHAALMIYRKSRKAGCTISLKAYKLLLARLARFGKSG 432
Query: 230 FAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG-CVPDVITYHCF 288
++++ EM+E G ++ LC G++ A +V+ E KG C+ V+
Sbjct: 433 IVLKIWEEMQESGHPSDKEIYEFIVNGLCNVGKLDAAVSVVEESLMKGICLGRVVYSKLN 492
Query: 289 FRCLE 293
R LE
Sbjct: 493 NRLLE 497
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 18/198 (9%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNL---IHRMKD--NPSSIPNHATFRIMFKRYVTAH 81
+ TT YN++I F F S +L I KD + + PN AT+ M + + A
Sbjct: 306 YGPTTTAYNALI------FNFISSGDLDRCIKYYKDMVDKNCPPNSATYCKMIRALLRAR 359
Query: 82 LVNEAMGTFNKLDEFGLKDEVSYCNL-VDALCEYKHVIEAQELCFGENKNVGFSGLVEMN 140
V +A+ F + G+ L ++ LC Y A + + +++ G +
Sbjct: 360 RVADALQMFGDMFTRGVLPNTGDITLFIEPLCTYGPP-HAALMIYRKSRKAGCT-----I 413
Query: 141 KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
K Y ++L + G + WEEM + G D Y ++ +C GK AV +
Sbjct: 414 SLKAYKLLLARLARFGKSGIVLKIWEEMQESGHPSDKEIYEFIVNGLCNVGKLDAAVSVV 473
Query: 201 KEMKKKGIKMDVVAYNTV 218
+E KGI + V Y+ +
Sbjct: 474 EESLMKGICLGRVVYSKL 491
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 159/320 (49%), Gaps = 10/320 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQEL 123
PN T+ + + A V+ A + + GLK V++ ++V+ +C+ + +A+++
Sbjct: 183 PNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKV 242
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F E G + YN ++ G+ K + + EM ++G++ D+ +++
Sbjct: 243 -FDEMMREGLA-----PDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSL 296
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ +MCK+G AV L ++M+++G++M+ V + +I +D A+ R MR+
Sbjct: 297 IHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRI 356
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFD 303
+PSVV N +I C GR+ EA +L EM KG PDV+TY K + F+
Sbjct: 357 KPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFE 416
Query: 304 ---RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+M+E G+ P TY L+R L V++K M +LG PDEF Y +L+D
Sbjct: 417 LNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHC 476
Query: 361 DKGMLDMARKYDEEMFAKGL 380
+G ++ A ++M G+
Sbjct: 477 KEGNVERALSLHDKMVKAGV 496
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 117/230 (50%), Gaps = 10/230 (4%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN +L S R F++ M GV ++++Y+I + +C G +A+ + ++M+
Sbjct: 119 YNAVLLALSDASLT-SARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMR 177
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
G +VV YNT++ A + VD A R+ M + G +P++VT N+++ +C+ G++
Sbjct: 178 GAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKME 237
Query: 265 EAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPKMDTYV 318
+A V EM ++G PD ++Y +C C E L +F M + GI P + T+
Sbjct: 238 DARKVFDEMMREGLAPDGVSYNTLVGGYCKAGC---SHEALSVFAEMTQKGIMPDVVTFT 294
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
L+ + G L + ++M E G +E + AL+D KG LD A
Sbjct: 295 SLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDA 344
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 167/380 (43%), Gaps = 52/380 (13%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKH------- 116
P+ ++ + Y A +EA+ F ++ + G + D V++ +L+ +C+ +
Sbjct: 253 PDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTL 312
Query: 117 VIEAQELCFGENKNVGFSGLVE-----------------MNKTKI------YNMILRGWF 153
V + +E N+ V F+ L++ M + +I YN ++ G+
Sbjct: 313 VRQMRERGLQMNE-VTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYC 371
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
+ + RE EM+ +G+ D+ +YS + CK+ A +L ++M +KG+ D +
Sbjct: 372 MVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAI 431
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
Y+++IR + + + A +++ M ++G QP T ++I C+ G V A ++ +M
Sbjct: 432 TYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKM 491
Query: 274 PKKGCVPDVITYHCFFRCL------------------EKPREILGLFDRMIESGIRPKMD 315
K G +PDV+TY L E+P +D ++ + ++
Sbjct: 492 VKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELK 551
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
+ + LL+ F G + V++ M + + D Y+ L+ G + A + ++M
Sbjct: 552 SVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQM 611
Query: 376 FAKGLSAKPREELGTKLVQG 395
+G + P L++G
Sbjct: 612 LQRGFA--PNSTSTISLIRG 629
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 4/173 (2%)
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
V+AYN V+ A+ + A R + M G P+V T N +I+ LC G +EA ++L
Sbjct: 115 SVLAYNAVLLALS-DASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSIL 173
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRW 327
+M GC P+V+TY+ + E+ G L M++ G++P + T+ ++ +
Sbjct: 174 RDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKA 233
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G + V+ +M G +PD +YN LV G A EM KG+
Sbjct: 234 GKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGI 286
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 84/407 (20%), Positives = 158/407 (38%), Gaps = 61/407 (14%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+ S+I ++ K + + L+ +M++ + N TF + + +++A+
Sbjct: 292 TFTSLIHVMCKAGNLEWAVTLVRQMRERGLQM-NEVTFTALIDGFCKKGFLDDALLAVRG 350
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + +K V Y L++ C + EA+EL E + G V Y+ I+
Sbjct: 351 MRQCRIKPSVVCYNALINGYCMVGRMDEAREL-LHEMEAKGLKPDV-----VTYSTIISA 404
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K E ++M ++GV+ D +YS + ++C+ + A L+K M K G++ D
Sbjct: 405 YCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPD 464
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
Y ++I V+ A+ ++ +M + G P VVT + +I L ++ R EA +L
Sbjct: 465 EFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLF 524
Query: 272 EMPKKGCVPDVITYHCFFRCLEKP--REILGLFDRMIESGIRPKMD-------------- 315
++ + +P Y C K + +L L G+ + D
Sbjct: 525 KLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLD 584
Query: 316 --TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP-------------------------- 347
Y +L+ R G + K+M + G +P
Sbjct: 585 GSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQ 644
Query: 348 ---------DEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
D A AL+D +++G +D M GL PR
Sbjct: 645 QLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPSPR 691
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 163/344 (47%), Gaps = 23/344 (6%)
Query: 40 ILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK 99
+LGK + +S NL T+ I + A + EA+ + + + +
Sbjct: 209 LLGKVIQRGMSINLF--------------TYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP 254
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWG 159
D V+Y L+ LC+ EA + + G + + T YN I+ G+ K+S
Sbjct: 255 DVVTYNTLIRGLCKKSMPQEAMHYL----RRMMNQGCLPDDFT--YNTIIDGYCKISMVQ 308
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+ E ++ +G V D +Y ++ +C G +A++L+ E + KGIK D+V YN+++
Sbjct: 309 EATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLV 368
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
+ + + + A++V EM E GC P + T N VI LC+ G + +A V+ + KG +
Sbjct: 369 KGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYL 428
Query: 280 PDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVV 336
PDV T++ K ++ L L +RM E GI P TY +L + G + V
Sbjct: 429 PDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNET 488
Query: 337 WKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+++M GC P+ YN L++ ++ A K +M +GL
Sbjct: 489 FQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 532
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 167/381 (43%), Gaps = 36/381 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++I L K + + + RM N +P+ T+ + Y +V EA
Sbjct: 258 TYNTLIRGLCKKSMPQEAMHYLRRMM-NQGCLPDDFTYNTIIDGYCKISMVQEATELLKD 316
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG-------FSGLVE------ 138
G + D+V+YC+L++ LC V A EL F E + G ++ LV+
Sbjct: 317 AVFKGFVPDQVTYCSLINGLCAEGDVERALEL-FNEAQAKGIKPDIVVYNSLVKGLCLQG 375
Query: 139 --------MNK---------TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
MN+ + YN+++ G KM + +G + D+ +++
Sbjct: 376 LILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFN 435
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+D CK K A++L + M + GI D + YN+V+ + + V+ ++EM
Sbjct: 436 TLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK 495
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG- 300
GC P+ +T N +I+ C + ++ EA V+ +M ++G PD ++++ + ++ G
Sbjct: 496 GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGA 555
Query: 301 --LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
LF ++ E G DT+ L+ F + ++ +M G D + Y L+D
Sbjct: 556 YLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDG 615
Query: 359 LIDKGMLDMARKYDEEMFAKG 379
+D A + EM KG
Sbjct: 616 SCKTANVDRAYMHLVEMIKKG 636
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 156/387 (40%), Gaps = 49/387 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
YN+++D L D + + RM S P+ T I + + + A+
Sbjct: 88 AYNAIMDALVDAAYHDQAHKVYVRMLAAGVS-PDLHTHTIRLRSFCLTARPHIALRLLRA 146
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
L G V+YC +V L + H +A++L F L NK +L
Sbjct: 147 LPHRG---AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNK------VLHAL 197
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K + ++ +RG+ +L +Y+I++ +C++G+ +AV+L M+ + DV
Sbjct: 198 CKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP-DV 256
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V YNT+IR + AM R M GC P T NT+I C+ V+EA +L +
Sbjct: 257 VTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKD 316
Query: 273 MPKKGCVPDVITYHCFFR--CLEKPRE-ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
KG VPD +TY C E E L LF+ GI+P + Y L++ G
Sbjct: 317 AVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGL 376
Query: 330 LRPVFVVWKKMEELGCSPD-----------------------------------EFAYNA 354
+ V +M E GC PD F +N
Sbjct: 377 ILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNT 436
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLS 381
L+D + LD A + E M+ G++
Sbjct: 437 LIDGYCKRLKLDSALQLVERMWEYGIA 463
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 167/399 (41%), Gaps = 22/399 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C D +RALE FN + YNS++ L + +++ M + P
Sbjct: 337 CAEGDVERALELFNEAQAK-GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH-P 394
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ I+ +++A N G L D ++ L+D C+ + A +L
Sbjct: 395 DIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLV 454
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+ + G+ T YN +L G K + E ++EM +G + +Y+I +
Sbjct: 455 ----ERMWEYGIAP--DTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILI 508
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ C+S K +A K+ +M ++G+ D V++NT+I + ++ A +++++ E G
Sbjct: 509 ENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYS 568
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF----RCLEKPREILG 300
+ T NT+I + A + EM KG D TY + R +
Sbjct: 569 ATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMH 628
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L + MI+ G P M T+ ++ + + M ++G P+ +VD ++
Sbjct: 629 LVE-MIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPE------VVDTIL 681
Query: 361 --DKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGL 397
DK + + E++ KG + P E+ + VQ +
Sbjct: 682 NADKKEIAAPKILVEDLMKKGHISYPTYEVLHEGVQSTI 720
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 108/270 (40%), Gaps = 35/270 (12%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+Y +R + + + +E MD +Y+ MD + + +A K+Y M
Sbjct: 53 LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 112
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ------------------- 244
G+ D+ + +R+ ++ A+R+ R + G
Sbjct: 113 LAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDAR 172
Query: 245 ------------PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
P++ N V+ LC+ G V EA +L ++ ++G ++ TY+ + R L
Sbjct: 173 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 232
Query: 293 -EKPR--EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE 349
E R E + L D M + P + TY L+R + + ++M GC PD+
Sbjct: 233 CEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDD 291
Query: 350 FAYNALVDALIDKGMLDMARKYDEEMFAKG 379
F YN ++D M+ A + ++ KG
Sbjct: 292 FTYNTIIDGYCKISMVQEATELLKDAVFKG 321
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
R+ + I P YV +R + R G LR +++M+ C P AYNA++DAL+D
Sbjct: 44 RLSPATIHP---LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAA 100
Query: 364 MLDMARKYDEEMFAKGLS 381
D A K M A G+S
Sbjct: 101 YHDQAHKVYVRMLAAGVS 118
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 172/367 (46%), Gaps = 36/367 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWN----LIHRMKDNPSSIP-NHATFRIMFKRYVTAHLVNEAM 87
TYN V+ + K + W L+ MK++ IP + T+ + L EA
Sbjct: 215 TYNVVLHVYSKIA---VPWKDVVALVDSMKND--GIPLDRYTYNTLISCCRRGALYKEAA 269
Query: 88 GTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYN 146
F+++ G + D+V++ +L+D + + EA G K + G T YN
Sbjct: 270 KVFDEMRAAGFEPDKVTFNSLLDVYGKARMHDEA----IGVLKEMELGGCPPSVVT--YN 323
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++ + K + E EEM+ +G+ D+ +Y+ + + ++GK A+ Y EM +
Sbjct: 324 SLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRN 383
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
G K ++ YN +I+ GV M V+ ++R G P VVT NT++ + +NG E
Sbjct: 384 GCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEV 443
Query: 267 YAVLAEMPKKGCVPDVITY----HCFFRCLEKPREILGLFD-------RMIESGIRPKMD 315
V EM K G VP+ TY + RC GLFD RMIE+GI P +
Sbjct: 444 SGVFKEMKKSGYVPERDTYVSLISSYSRC--------GLFDQSMEIYKRMIEAGIYPDIS 495
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
TY +L R G ++ +ME L C PDE +Y++L+ A + LD + E++
Sbjct: 496 TYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDI 555
Query: 376 FAKGLSA 382
+A+ + +
Sbjct: 556 YAEKIES 562
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 39/259 (15%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK--------- 195
Y ++ + + S + + M G+ + +Y++ + + K PWK
Sbjct: 181 YTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVALVDSM 240
Query: 196 ---------------------------AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV 228
A K++ EM+ G + D V +N+++ G +
Sbjct: 241 KNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARMH 300
Query: 229 DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
D A+ V +EM GC PSVVT N++I ++G ++EA + EM KG PDVITY
Sbjct: 301 DEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTL 360
Query: 289 FRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
L++ +I +G +D M+ +G +P + TY L++ G G + V+ + G
Sbjct: 361 ISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGF 420
Query: 346 SPDEFAYNALVDALIDKGM 364
PD +N L+ G+
Sbjct: 421 VPDVVTWNTLLAVFGQNGL 439
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 6/189 (3%)
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV-REAYAV 269
D AY ++ A + A+ V+R M G QP++VT N V+ + + ++ A+
Sbjct: 177 DASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVAL 236
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
+ M G D TY+ C + +E +FD M +G P T+ LL +G+
Sbjct: 237 VDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGK 296
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPRE 386
V K+ME GC P YN+L+ + + G+L A + EEM KG+ +P
Sbjct: 297 ARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGI--QPDV 354
Query: 387 ELGTKLVQG 395
T L+ G
Sbjct: 355 ITYTTLISG 363
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 91/220 (41%), Gaps = 39/220 (17%)
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA---VGV-------- 224
D +Y+ + ++ + AV +++ M GI+ +V YN V+ + V
Sbjct: 177 DASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVAL 236
Query: 225 -----SEGVDF--------------------AMRVYREMREMGCQPSVVTCNTVIKLLCE 259
++G+ A +V+ EMR G +P VT N+++ + +
Sbjct: 237 VDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGK 296
Query: 260 NGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDT 316
EA VL EM GC P V+TY+ K +E L + M GI+P + T
Sbjct: 297 ARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVIT 356
Query: 317 YVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
Y L+ R G + + +M GC P+ YNAL+
Sbjct: 357 YTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALI 396
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 71/134 (52%)
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
T YN ++ + ++ KC E+ G D +SY+ + + G+ +A +L+
Sbjct: 634 TATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFS 693
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
EMK G+ D+V YN +++ + + A+ + R M GC+P+ T N++++ C +G
Sbjct: 694 EMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTRGCKPNERTYNSILQEYCRHG 753
Query: 262 RVREAYAVLAEMPK 275
++ +A + L+ +P+
Sbjct: 754 KIADAKSFLSNLPQ 767
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 135/301 (44%), Gaps = 11/301 (3%)
Query: 32 DTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
DTY S+I + FD S + RM + P+ +T+ + +A F
Sbjct: 460 DTYVSLISSYSRCGLFDQSMEIYKRMIEA-GIYPDISTYNAVLSALARGGRWEQAEKLFA 518
Query: 92 KLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
+++ + DE+SY +L+ A K + + + L ++++ ++ +E + + ++L
Sbjct: 519 EMENLDCRPDELSYSSLLHAYANAKKLDKMKAL----SEDI-YAEKIESHHGLVKTLVLV 573
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
K++ + + + E+ +R D++ + + + K+ K ++ MK I +
Sbjct: 574 NS-KVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINL 632
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
YN+++ + + E++ G +P + NT+I G+++EA +
Sbjct: 633 STATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLF 692
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
+EM G +PD++TY+ F + E + L M+ G +P TY +L+++ R
Sbjct: 693 SEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTRGCKPNERTYNSILQEYCRH 752
Query: 328 G 328
G
Sbjct: 753 G 753
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/406 (19%), Positives = 158/406 (38%), Gaps = 58/406 (14%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY ++I L + + D + M N PN T+ + K + E M F+
Sbjct: 356 TYTTLISGLDRAGKIDAAIGTYDEMLRN-GCKPNLCTYNALIKLHGVRGKFPEMMAVFDD 414
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
L G +V N + A+ + F E K G+ + + Y ++ +
Sbjct: 415 LRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGY-----VPERDTYVSLISSY 469
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
+ + + E ++ M + G+ D+ +Y+ + + + G+ +A KL+ EM+ + D
Sbjct: 470 SRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDE 529
Query: 213 VAYNTVIRAVGVSEGVD----FAMRVYREMREM--GCQPSVVTCNTVIKLLCENGRVREA 266
++Y++++ A ++ +D + +Y E E G ++V N+ + L E +
Sbjct: 530 LSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKA--- 586
Query: 267 YAVLAEMPKKGCVPDV------ITYHCFFRCLEKPREILGL------------------- 301
E+ ++ C D+ ++ + R ++K EIL L
Sbjct: 587 ---FLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHM 643
Query: 302 -------------FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
+ SG RP +Y ++ +GR G ++ ++ +M+ G PD
Sbjct: 644 YSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPD 703
Query: 349 EFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQ 394
YN V + + M + A M +G KP E ++Q
Sbjct: 704 IVTYNIFVKSYVANSMFEEAIDLVRYMVTRG--CKPNERTYNSILQ 747
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/373 (18%), Positives = 146/373 (39%), Gaps = 23/373 (6%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F T+N+++ + G+ D + + + +P T+ + Y L +++
Sbjct: 420 FVPDVVTWNTLLAVFGQN-GLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQS 478
Query: 87 MGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYN 146
M + ++ E G+ ++S N V + E E F E +N+ E++ Y+
Sbjct: 479 MEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRP-DELS----YS 533
Query: 147 MILRGWFKMSWWGKCREFWEEM------DKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
+L + K + E++ G+VK L + + K + K +
Sbjct: 534 SLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTL------VLVNSKVNNLSETEKAF 587
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
E+ ++ +D+ N ++ G + V + M+ S T N+++ +
Sbjct: 588 LELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRL 647
Query: 261 GRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTY 317
G + +L E+ G PD +Y+ + +E LF M SG+ P + TY
Sbjct: 648 GDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTY 707
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM-- 375
+ ++ + + + M GC P+E YN+++ G + A+ + +
Sbjct: 708 NIFVKSYVANSMFEEAIDLVRYMVTRGCKPNERTYNSILQEYCRHGKIADAKSFLSNLPQ 767
Query: 376 FAKGLSAKPREEL 388
G+S + ++ L
Sbjct: 768 LHPGISKQEQQRL 780
>gi|297807171|ref|XP_002871469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317306|gb|EFH47728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 602
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 179/369 (48%), Gaps = 29/369 (7%)
Query: 18 FNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLI-HRMK-DNPSSIPNHATFRIMFK 75
F W E FT + ++SVI+ L K EF+++W+L+ R++ D S++ + TF ++ +
Sbjct: 122 FKWAEMKPGFTLSPSLFDSVINSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIR 181
Query: 76 RYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN----------LVDALCEYKHVIEAQELCF 125
RY A +V +A+ F EF E C L+DALC+ +V EA +
Sbjct: 182 RYARAGMVQQAIRAF----EFARSYE-PVCKSASELKLLEVLLDALCKEGYVREAS--VY 234
Query: 126 GENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
E + G+++ N +I+N++L GWF+ + + WEEM V + +Y
Sbjct: 235 LERRR----GMMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGT 290
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ C+ + A+++ +EMK +++ + +N +I +G + + A+ +
Sbjct: 291 LIEGYCRMRRVEIAMEILEEMKMAEMELTFMVFNPIIDGLGEAGRLSEALGMMERFFVCE 350
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE---KPREIL 299
P++VT N+++K C+ G + A +L M +G P TY+ FF+ K E +
Sbjct: 351 SGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVEPTTSTYNHFFKYFSKHNKTEEGM 410
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
L+ ++IE+G P TY ++L+ G L V K+M+ G PD L+ L
Sbjct: 411 NLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAIQVNKEMKNRGIDPDLLTTTMLMHLL 470
Query: 360 IDKGMLDMA 368
ML+ A
Sbjct: 471 CRLDMLEEA 479
>gi|297828902|ref|XP_002882333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328173|gb|EFH58592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 506
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 178/386 (46%), Gaps = 16/386 (4%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+ +DWK AL NW E+ H+ D Y+ +DILGK ++D + RM+ + N
Sbjct: 95 FRDDWKSALGVLNWAESCKGHKHSNDAYDMAVDILGKAKKWDRLKVFVERMRGDKLVTLN 154
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV-DALCEYKHVIEAQELCF 125
T + +R+ A EA+G F+KL EFGL+ NL+ D LC+ K V +A+ +
Sbjct: 155 --TIAKIMRRFAGAGEWEEAVGIFDKLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLL 212
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
++ + +N+ + GW K + + +EM G + SY+ +
Sbjct: 213 ELKSHITPNA-------HTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIR 265
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
C+ + K ++ EM+ G + + Y T++ ++ + + A+RV M+ GCQP
Sbjct: 266 CYCQQSEFVKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCQP 325
Query: 246 SVVTCNTVIKLLCENGRVREAYAVL-AEMPKKGCVPDVITYHCFFRCL---EKPREILGL 301
+ N +I L +GR+ EA V EMP+ G + TY+ ++ + + L
Sbjct: 326 DSLFYNCLIHTLARSGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIEL 385
Query: 302 FDRMIESGI-RPKMDTYVMLLRKFGRWGFLRPVFVVWKKM-EELGCSPDEFAYNALVDAL 359
M S + P + TY LLR + G + V + K+M + S DE Y L+ L
Sbjct: 386 LKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRL 445
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPR 385
+ + A EEM ++ ++ + R
Sbjct: 446 CRANICEWAYCLFEEMISQDITPRHR 471
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 163/344 (47%), Gaps = 23/344 (6%)
Query: 40 ILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK 99
+LGK + +S NL T+ I + A + EA+ + + + +
Sbjct: 208 LLGKVIQRGMSINLF--------------TYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP 253
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWG 159
D V+Y L+ LC+ EA + + G + + T YN I+ G+ K+S
Sbjct: 254 DVVTYNTLIRGLCKKSMPQEAMHYL----RRMMNQGCLPDDFT--YNTIIDGYCKISMVQ 307
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+ E ++ +G V D +Y ++ +C G +A++L+ E + KGIK D+V YN+++
Sbjct: 308 EATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLV 367
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
+ + + + A++V EM E GC P + T N VI LC+ G + +A V+ + KG +
Sbjct: 368 KGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYL 427
Query: 280 PDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVV 336
PDV T++ K ++ L L +RM E GI P TY +L + G + V
Sbjct: 428 PDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNET 487
Query: 337 WKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+++M GC P+ YN L++ ++ A K +M +GL
Sbjct: 488 FQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 531
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 167/381 (43%), Gaps = 36/381 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++I L K + + + RM N +P+ T+ + Y +V EA
Sbjct: 257 TYNTLIRGLCKKSMPQEAMHYLRRMM-NQGCLPDDFTYNTIIDGYCKISMVQEATELLKD 315
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG-------FSGLVE------ 138
G + D+V+YC+L++ LC V A EL F E + G ++ LV+
Sbjct: 316 AVFKGFVPDQVTYCSLINGLCAEGDVERALEL-FNEAQAKGIKPDIVVYNSLVKGLCLQG 374
Query: 139 --------MNK---------TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
MN+ + YN+++ G KM + +G + D+ +++
Sbjct: 375 LILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFN 434
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+D CK K A++L + M + GI D + YN+V+ + + V+ ++EM
Sbjct: 435 TLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK 494
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG- 300
GC P+ +T N +I+ C + ++ EA V+ +M ++G PD ++++ + ++ G
Sbjct: 495 GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGA 554
Query: 301 --LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
LF ++ E G DT+ L+ F + ++ +M G D + Y L+D
Sbjct: 555 YLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDG 614
Query: 359 LIDKGMLDMARKYDEEMFAKG 379
+D A + EM KG
Sbjct: 615 SCKTANVDRAYMHLVEMIKKG 635
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 156/387 (40%), Gaps = 49/387 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
YN+++D L D + + RM S P+ T I + + + A+
Sbjct: 87 AYNAIMDALVDAAYHDQAHKVYVRMLAAGVS-PDLHTHTIRLRSFCLTARPHIALRLLRA 145
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
L G V+YC +V L + H +A++L F L NK +L
Sbjct: 146 LPHRG---AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNK------VLHAL 196
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K + ++ +RG+ +L +Y+I++ +C++G+ +AV+L M+ + DV
Sbjct: 197 CKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP-DV 255
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V YNT+IR + AM R M GC P T NT+I C+ V+EA +L +
Sbjct: 256 VTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKD 315
Query: 273 MPKKGCVPDVITYHCFFR--CLEKPRE-ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
KG VPD +TY C E E L LF+ GI+P + Y L++ G
Sbjct: 316 AVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGL 375
Query: 330 LRPVFVVWKKMEELGCSPD-----------------------------------EFAYNA 354
+ V +M E GC PD F +N
Sbjct: 376 ILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNT 435
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLS 381
L+D + LD A + E M+ G++
Sbjct: 436 LIDGYCKRLKLDSALQLVERMWEYGIA 462
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 167/399 (41%), Gaps = 22/399 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C D +RALE FN + YNS++ L + +++ M + P
Sbjct: 336 CAEGDVERALELFNEAQAK-GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH-P 393
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ I+ +++A N G L D ++ L+D C+ + A +L
Sbjct: 394 DIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLV 453
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+ + G+ T YN +L G K + E ++EM +G + +Y+I +
Sbjct: 454 ----ERMWEYGIAP--DTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILI 507
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ C+S K +A K+ +M ++G+ D V++NT+I + ++ A +++++ E G
Sbjct: 508 ENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYS 567
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF----RCLEKPREILG 300
+ T NT+I + A + EM KG D TY + R +
Sbjct: 568 ATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMH 627
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L + MI+ G P M T+ ++ + + M ++G P+ +VD ++
Sbjct: 628 LVE-MIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPE------VVDTIL 680
Query: 361 --DKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGL 397
DK + + E++ KG + P E+ + VQ +
Sbjct: 681 NADKKEIAAPKILVEDLMKKGHISYPTYEVLHEGVQSTI 719
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 108/270 (40%), Gaps = 35/270 (12%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+Y +R + + + +E MD +Y+ MD + + +A K+Y M
Sbjct: 52 LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 111
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ------------------- 244
G+ D+ + +R+ ++ A+R+ R + G
Sbjct: 112 LAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDAR 171
Query: 245 ------------PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
P++ N V+ LC+ G V EA +L ++ ++G ++ TY+ + R L
Sbjct: 172 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 231
Query: 293 -EKPR--EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE 349
E R E + L D M + P + TY L+R + + ++M GC PD+
Sbjct: 232 CEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDD 290
Query: 350 FAYNALVDALIDKGMLDMARKYDEEMFAKG 379
F YN ++D M+ A + ++ KG
Sbjct: 291 FTYNTIIDGYCKISMVQEATELLKDAVFKG 320
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
R+ + I P YV +R + R G LR +++M+ C P AYNA++DAL+D
Sbjct: 43 RLSPATIHP---LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAA 99
Query: 364 MLDMARKYDEEMFAKGLS 381
D A K M A G+S
Sbjct: 100 YHDQAHKVYVRMLAAGVS 117
>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
Length = 688
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 156/329 (47%), Gaps = 10/329 (3%)
Query: 59 DNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHV 117
+N +P T+ M + + LV A F ++ GL D ++Y +L++ C+ ++
Sbjct: 302 ENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNL 361
Query: 118 IEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
EA L FG+ + G + V YN+ + G+ ++ + R EEM ++G + ++
Sbjct: 362 KEAL-LLFGDLRRAGLAPTV-----LTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNV 415
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
+Y+I M A + + EM KG++ D AYNT I A + + A+ +
Sbjct: 416 CTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREV 475
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC-LEKP- 295
+ G VT N +I LC+ G +++A + +M G PD ITY C E+
Sbjct: 476 LMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGL 535
Query: 296 -REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
RE +F+ MI G+ P T+ +++ + R G L + ++KM E G P+E YN
Sbjct: 536 LREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNV 595
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLSAK 383
L+ AL G +A + EM +GL A
Sbjct: 596 LIHALCRMGRTQLASHHFHEMLERGLVAN 624
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 126/298 (42%), Gaps = 41/298 (13%)
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
LC + + G+ K N +LR + W EEM + G+ + +Y+
Sbjct: 152 LCLSAFREMASHGVAP--DVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNT 209
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKM--DVVAYNTVI----------RAVGVSEGVDF 230
+D K G+ K L KEM+ +G + V YN VI A + EG+
Sbjct: 210 LLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRL 269
Query: 231 AMRVYR------------------------EMREMGCQPSVVTCNTVIKLLCENGRVREA 266
+ + EM G P+VVT N +I L ++G V A
Sbjct: 270 SKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAA 329
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRK 323
AEM G +PDVITY+ K +E L LF + +G+ P + TY + +
Sbjct: 330 QVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDG 389
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ R G L ++ ++M E GC P+ Y L+ ++ L MAR++ +EM +KGL
Sbjct: 390 YCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQ 447
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 130/296 (43%), Gaps = 28/296 (9%)
Query: 98 LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSW 157
L ++V+Y ++ L + EA EL G L + + YN ++ G
Sbjct: 238 LPNDVTYNVVITGLTRKGDLEEAAELVEGMR-------LSKKASSFTYNPLITGLLARGC 290
Query: 158 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
K + EM+ G++ + +Y+ + + +SG A + EM+ G+ DV+ YN+
Sbjct: 291 VKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNS 350
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
++ + + A+ ++ ++R G P+V+T N I C G + EA + EM ++G
Sbjct: 351 LLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQG 410
Query: 278 CVPDVITYHCFFR------CLEKPREILGLFDRMIESGIRPKMDTY------VMLLRKFG 325
C+P+V TY + L RE FD M+ G++P Y ++L
Sbjct: 411 CLPNVCTYTILMKGSLNVCSLAMARE---FFDEMLSKGLQPDCFAYNTRICAELILGDIA 467
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
R LR V ++ G S D YN L+ L G L A++ +M + GL
Sbjct: 468 RALELREVLMLE------GISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQ 517
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 138/326 (42%), Gaps = 18/326 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A + K AL F + T TYN ID + + + + L M + +P
Sbjct: 356 CKAGNLKEALLLFGDLRR-AGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQ-GCLP 413
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDA---LCEYKHVIEAQ 121
N T+ I+ K + + A F+++ GL+ D +Y + A L + +E +
Sbjct: 414 NVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELR 473
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
E+ E G S + T YN+++ G K +E +M G+ D +Y+
Sbjct: 474 EVLMLE----GIS-----SDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYT 524
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+ C+ G +A K++ M G+ V + +I A + A +R+M E
Sbjct: 525 CLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEE 584
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF--RC-LEKPREI 298
G +P+ +T N +I LC GR + A EM ++G V + TY C + +
Sbjct: 585 GVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDA 644
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKF 324
+ + M ++GI P T+ L++ F
Sbjct: 645 MRFYFEMHQNGIHPDYLTHKALVKGF 670
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 162/365 (44%), Gaps = 8/365 (2%)
Query: 15 LEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
++FF W ++ H T TY ++I L ++ W +I M NP + +
Sbjct: 103 MQFFRWAARKRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDII 162
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFS 134
+ A ++++A+ F ++ + N + + ++ E + E N G
Sbjct: 163 RMLGNAKMISKAVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQC 222
Query: 135 GLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPW 194
T Y+ ++ + K+ EM G+ Y++ M ++ K
Sbjct: 223 ----FPDTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVH 278
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
A+ L++EM+ + + DV Y +IR +G + +D A + EMR GC+P V N +I
Sbjct: 279 GALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMI 338
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL----EKPREILGLFDRMIESGI 310
L + GR+ +A + EM C+P V+TY+ + L + EI F+RM SGI
Sbjct: 339 NFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGI 398
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
P TY +L+ F + ++ ++M+E G P AY +L+DAL D+A +
Sbjct: 399 SPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANE 458
Query: 371 YDEEM 375
+E+
Sbjct: 459 LFQEL 463
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 179/408 (43%), Gaps = 35/408 (8%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+ ++++ E +N + + T TY+++I K D + L++ MKDN P
Sbjct: 202 HEGEYEKVHELYNEMSNEGQCFPDTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQ-PT 260
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKL-DEFGLKDEVSYCNLVDALCEYKHVIEA----- 120
+ ++ V+ A+G F ++ ++ D +Y L+ L + + EA
Sbjct: 261 AKIYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFH 320
Query: 121 ---QELCFGE----NKNVGFSG-----------LVEMNKTK------IYNMILRGWFKM- 155
+E C + N + F G EM + YN I++ F+
Sbjct: 321 EMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESK 380
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
S + ++E M G+ +YSI +D CK+ + KA+ L +EM +KG AY
Sbjct: 381 SRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAY 440
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
++I A+G ++ D A +++E++E S +IK L + GR+ +A + EM +
Sbjct: 441 CSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNR 500
Query: 276 KGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
GC P+V Y+ L + E L RM + G P +++Y ++L + G
Sbjct: 501 LGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDR 560
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ M++ PD +YN ++ AL GM + A K +EM A G
Sbjct: 561 AMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGF 608
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 148/331 (44%), Gaps = 10/331 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +I LGK D ++N H M+ P+ M A +++A+ F +
Sbjct: 298 TYTELIRGLGKAGRLDEAYNFFHEMRREGCR-PDTVLMNNMINFLGKAGRLDDAIKLFEE 356
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
++ + V+Y ++ AL E K + F K G S Y++++ G
Sbjct: 357 METLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISP-----SPFTYSILIDG 411
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K + K EEMD++G +Y +D + K+ + A +L++E+K+
Sbjct: 412 FCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSS 471
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
Y +I+ +G + +D A+ ++ EM +GC P+V N ++ L G + EA +
Sbjct: 472 ARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMR 531
Query: 272 EMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M GC+PD+ +Y+ L K P +G+ M +S I+P +Y +L G
Sbjct: 532 RMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAG 591
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ K+M +G D Y+++++A+
Sbjct: 592 MFEEAAKLMKEMNAIGFDYDLITYSSILEAI 622
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 134/286 (46%), Gaps = 16/286 (5%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDIL----GKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
A++ F +ET + TYN++I L + E SW RMK + S P+ T
Sbjct: 350 AIKLFEEMET-LRCIPSVVTYNTIIKALFESKSRVSEIS-SW--FERMKGSGIS-PSPFT 404
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKD-EVSYCNLVDALCEYKHVIEAQELCFGEN 128
+ I+ + + +AM ++DE G +YC+L+DAL + K A EL
Sbjct: 405 YSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELK 464
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
+N G S ++Y ++++ K + ++EM++ G ++++Y+ M +
Sbjct: 465 ENCGSSS------ARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLA 518
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
++G +A+ + M+ G D+ +YN ++ A+ + G D AM + M++ +P V
Sbjct: 519 RAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAV 578
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
+ NTV+ L G EA ++ EM G D+ITY + K
Sbjct: 579 SYNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLITYSSILEAIGK 624
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 100/213 (46%), Gaps = 14/213 (6%)
Query: 178 HSYSIYM------DIMCKSGKPWKAVKLYKEMKKKGI-KMDVVAYNTVIRAVGVSEGVDF 230
H S YM +++ + G+ WK ++ EM + + + + + +IR +G ++ +
Sbjct: 117 HDTSTYMALIRCLEVVEQYGEMWKMIQ---EMVRNPVCVVTPMELSDIIRMLGNAKMISK 173
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG-CVPDVITYHCFF 289
A+ ++ +++ CQP+ N++I +L G + + + EM +G C PD +TY
Sbjct: 174 AVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSALI 233
Query: 290 RC---LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
L + + L + M ++G++P Y ML+ + + ++++M C
Sbjct: 234 SAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQYCR 293
Query: 347 PDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
PD F Y L+ L G LD A + EM +G
Sbjct: 294 PDVFTYTELIRGLGKAGRLDEAYNFFHEMRREG 326
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 169/351 (48%), Gaps = 11/351 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+++++I +L K D + MK N P++ + I+ + +++EA+ ++
Sbjct: 500 SFSALIGLLSKNGCLDQALKYFRDMK-NAGLAPDNVIYTILIGGFCRNGVMSEALKVRDE 558
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G D V+Y +++ LC+ K + EA EL F E G + ++ G
Sbjct: 559 MLEQGCXLDVVTYNTILNGLCKEKMLSEADEL-FTEMTERGV-----FPDFYTFTTLING 612
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K K +E M +R + D+ +Y+ +D CK + K +L+ +M + I +
Sbjct: 613 YXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPN 672
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
++Y +I V A R++ EM E G + +++TCNT++K C G +A L+
Sbjct: 673 HISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLS 732
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M KG VPD ITY+ K + L ++M SG+ P + TY ++L F R G
Sbjct: 733 NMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQG 792
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++ ++ KM E G +PD Y +L++ + + L A + +EM +G
Sbjct: 793 RMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRG 843
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 165/354 (46%), Gaps = 11/354 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T N +I+ L K + + + + + M++ P+ T+ + Y L+ EA +
Sbjct: 360 TLNIMINALCKNQKIENTKSFLSDMEEK-GVFPDVVTYNTLINAYCRQGLLEEAFELMDS 418
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ GLK V +Y +++ LC+ + A+ + E +G S T YN++L
Sbjct: 419 MSGKGLKPCVFTYNAIINGLCKTGKYLRAKGV-LDEMLKIGMSP-----DTATYNILLVE 472
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ ++EM +GVV DL S+S + ++ K+G +A+K +++MK G+ D
Sbjct: 473 CCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPD 532
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V Y +I + + A++V EM E GC VVT NT++ LC+ + EA +
Sbjct: 533 NVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFT 592
Query: 272 EMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM ++G PD T+ K + + LF+ MI+ ++P + TY L+ F +
Sbjct: 593 EMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGS 652
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ V +W M P+ +Y L++ + G + A + +EM KG A
Sbjct: 653 EMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEA 706
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 152/328 (46%), Gaps = 11/328 (3%)
Query: 35 NSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLD 94
NS++ L K DL+W + + + + N T IM + + ++
Sbjct: 327 NSLLGGLVKVGWVDLAWEIYQEVVRSGVQV-NVYTLNIMINALCKNQKIENTKSFLSDME 385
Query: 95 EFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWF 153
E G+ D V+Y L++A C + EA EL ++ GL T YN I+ G
Sbjct: 386 EKGVFPDVVTYNTLINAYCRQGLLEEAFELM----DSMSGKGLKPCVFT--YNAIINGLC 439
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
K + + + +EM K G+ D +Y+I + C++ A +++ EM +G+ D+V
Sbjct: 440 KTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLV 499
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
+++ +I + + +D A++ +R+M+ G P V +I C NG + EA V EM
Sbjct: 500 SFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEM 559
Query: 274 PKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
++GC DV+TY+ L K + E LF M E G+ P T+ L+ + + G +
Sbjct: 560 LEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNM 619
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDA 358
+++ M + PD YN L+D
Sbjct: 620 NKAVTLFEMMIQRNLKPDVVTYNTLIDG 647
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 163/384 (42%), Gaps = 62/384 (16%)
Query: 17 FFNWVETDC-HFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM--KDNPSSI--------- 64
F + + ++C +F H+ +++++I IL + + +I RM K S +
Sbjct: 221 FIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLT 280
Query: 65 -----PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIE 119
N F ++ + YV A + E CE V++
Sbjct: 281 YGNCGSNPLVFDLLVRTYVQARKLREG-------------------------CEAFRVLK 315
Query: 120 AQELCFGENK-NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
++ LC N N GLV++ GW ++W E ++E+ + GV +++
Sbjct: 316 SKGLCVSINACNSLLGGLVKV-----------GWVDLAW-----EIYQEVVRSGVQVNVY 359
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+ +I ++ +CK+ K +M++KG+ DVV YNT+I A ++ A + M
Sbjct: 360 TLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSM 419
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF-RCLEKPRE 297
G +P V T N +I LC+ G+ A VL EM K G PD TY+ C
Sbjct: 420 SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNM 479
Query: 298 ILG--LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
+ +FD M G+ P + ++ L+ + G L ++ M+ G +PD Y L
Sbjct: 480 MDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTIL 539
Query: 356 VDALIDKGMLDMARKYDEEMFAKG 379
+ G++ A K +EM +G
Sbjct: 540 IGGFCRNGVMSEALKVRDEMLEQG 563
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 138/283 (48%), Gaps = 15/283 (5%)
Query: 116 HVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVK 175
++E+ L +G N G + LV +++++R + + + E + + +G+
Sbjct: 272 EIVESLVLTYG---NCGSNPLV-------FDLLVRTYVQARKLREGCEAFRVLKSKGLCV 321
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
+++ + + + K G A ++Y+E+ + G++++V N +I A+ ++ ++
Sbjct: 322 SINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFL 381
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP 295
+M E G P VVT NT+I C G + EA+ ++ M KG P V TY+ L K
Sbjct: 382 SDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKT 441
Query: 296 REIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
+ L G+ D M++ G+ P TY +LL + R + ++ +M G PD ++
Sbjct: 442 GKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSF 501
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+AL+ L G LD A KY +M GL+ P + T L+ G
Sbjct: 502 SALIGLLSKNGCLDQALKYFRDMKNAGLA--PDNVIYTILIGG 542
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 124/284 (43%), Gaps = 11/284 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++++ L K + L M + P+ TF + Y +N+A+ F
Sbjct: 570 TYNTILNGLCKEKMLSEADELFTEMTER-GVFPDFYTFTTLINGYXKDGNMNKAVTLFEM 628
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + LK D V+Y L+D C+ + + EL N S + N Y +++ G
Sbjct: 629 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELW-----NDMISRRIYPNHIS-YGILING 682
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ M + W+EM ++G + + + + C++G KA + M KGI D
Sbjct: 683 YCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPD 742
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ YNT+I E +D A + +M G P V+T N ++ GR++EA ++
Sbjct: 743 GITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIML 802
Query: 272 EMPKKGCVPDVITYHCFFR---CLEKPREILGLFDRMIESGIRP 312
+M ++G PD TY +E + D M++ G P
Sbjct: 803 KMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 846
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 165/369 (44%), Gaps = 17/369 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A + + A++ +E T YN + L K + + ++ MKD P
Sbjct: 29 CLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACK-P 87
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELC 124
+ TF + A ++EA ++++ G + V+Y L++ L EA +
Sbjct: 88 DVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLV- 146
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKR-GVVKDLHSYSIY 183
G+ T+ YN I+ G+ K + F EEM +R G D +YSI
Sbjct: 147 --------MQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSIL 198
Query: 184 MDIMCKSGKPWKAVKLYKEM-KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ +CKS KA +L +EM +K VVA+NT++ ++ +D A + M E G
Sbjct: 199 INGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHG 258
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EIL 299
C P VVT +T+I LC G V + +A+L +M +GC PDV+TY L K E
Sbjct: 259 CAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEAC 318
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
L RM+E G P TY ++ + L + + + G D A+ L+ +
Sbjct: 319 RLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLLS- 377
Query: 360 IDKGMLDMA 368
+ K +LD A
Sbjct: 378 VKKRLLDRA 386
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 146/326 (44%), Gaps = 22/326 (6%)
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEF-GLKDEVSYCNL-VDALCEYKHVIEAQEL 123
++ T+ ++ + + A + AM ++++ G+ S N V ALC+ V EA E+
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+V +N ++ G K + ++ +EM++ G +L +Y+
Sbjct: 77 VKNMKDGACKPDVV------TFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTL 130
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE-MG 242
++ + +G+ +AV + + M D YN +I S +D A EM++ G
Sbjct: 131 INGLSSAGRSGEAVLVMQGMTTTP---DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAG 187
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEM-PKKGCVPDVITY------HCFFRCLEKP 295
C P T + +I LC++ +R+A +L EM +K C V+ + +C + L++
Sbjct: 188 CSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRA 247
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
RE+L M+E G P + TY ++ R G + F + +KM GC PD Y L
Sbjct: 248 RELLS---SMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVL 304
Query: 356 VDALIDKGMLDMARKYDEEMFAKGLS 381
V L G + A + + M G +
Sbjct: 305 VTGLCKAGKMVEACRLVKRMLEDGCT 330
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Query: 282 VITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKME 341
++ HC L+ ++L ++ + G+ P Y + + G + V K M+
Sbjct: 24 LVRAHCLAGELQAAMDLLREMEQ--QPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMK 81
Query: 342 ELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ C PD +N L+ L G LD A++ +EM G +A
Sbjct: 82 DGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAA 122
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 160/359 (44%), Gaps = 47/359 (13%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQE 122
+P+ F M + + +++A+ FN + E GL D V Y L+ C + A
Sbjct: 372 VPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMN 431
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L +N M+ YN IL G K G+ + + EM +R + D ++ +I
Sbjct: 432 L-----RNEMLQQGCAMDVVT-YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF------------ 230
+D CK G A++L+++MK+K I++DVV YNT++ G +D
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 231 -----------------------AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
A RV+ EM +P+V+ CN++IK C +G +
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605
Query: 268 AVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIE--SGIRPKMDTYVMLLR 322
+ L +M +G VPD I+Y+ F E + GL +M E G+ P + TY +L
Sbjct: 606 SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILH 665
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
F R ++ VV +KM E G +PD Y +++ + + L A + +EM +G S
Sbjct: 666 GFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFS 724
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 162/357 (45%), Gaps = 27/357 (7%)
Query: 26 HFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNE 85
+F HT+ + +++I IL + + + + RM I R+ +VN
Sbjct: 108 NFKHTSLSLSAMIHILVRSGRLSDAQSCLLRM------IRRSGVSRL--------EIVNS 153
Query: 86 AMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
TF+ G D V + L+ + + + EA E F ++ GF+ ++ I
Sbjct: 154 LDSTFSNC---GSNDSV-FDLLIRTYVQARKLREAHE-AFTLLRSKGFTVSIDACNALIG 208
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
+++ GW +++W ++E+ + GV ++++ +I ++ +CK GK K ++++
Sbjct: 209 SLVRIGWVELAWG-----VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
KG+ D+V YNT+I A ++ A + M G P V T NTVI LC++G+
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLR 322
A V AEM + G PD TY K +++ +F M + P + + ++
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
F R G L + + ++E G PD Y L+ KGM+ +A EM +G
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 176/383 (45%), Gaps = 16/383 (4%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A + A E F + + FT + D N++I L + +L+W + + + I N
Sbjct: 178 ARKLREAHEAFTLLRSK-GFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGI-NV 235
Query: 68 ATFRIMFKRYVTAHLVNEAMGTF-NKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCF 125
T IM + E +GTF +++ E G+ D V+Y L+ A + EA EL
Sbjct: 236 YTLNIMVNALCKDGKM-EKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFEL-M 293
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
GFS V YN ++ G K + + +E + EM + G+ D +Y +
Sbjct: 294 NAMPGKGFSPGV-----YTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLM 348
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
CK G + K++ +M+ + + D+V +++++ S +D A+ + ++E G P
Sbjct: 349 EACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIP 408
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG----L 301
V +I+ C G + A + EM ++GC DV+TY+ L K R++LG L
Sbjct: 409 DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCK-RKMLGEADKL 467
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
F+ M E + P T +L+ + G L+ +++KM+E D YN L+D
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 527
Query: 362 KGMLDMARKYDEEMFAKGLSAKP 384
G +D A++ +M +K + P
Sbjct: 528 VGDIDTAKEIWADMVSKEILPTP 550
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 16/190 (8%)
Query: 98 LKDEVSYCNLVDALCEYKHVIEA----QELCFGENKNVGFSGLVEMNKTKIYNMILRGWF 153
L +SY LV+ALC H+ EA E+ +KN+ + + I N +++G+
Sbjct: 547 LPTPISYSILVNALCSKGHLAEAFRVWDEMI---SKNIKPTVM-------ICNSMIKGYC 596
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK--GIKMD 211
+ F E+M G V D SY+ + + KA L K+M+++ G+ D
Sbjct: 597 RSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPD 656
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V YN+++ + A V R+M E G P T +I + EA+ +
Sbjct: 657 VFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHD 716
Query: 272 EMPKKGCVPD 281
EM ++G PD
Sbjct: 717 EMLQRGFSPD 726
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 45/243 (18%), Positives = 104/243 (42%), Gaps = 11/243 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + + A+E F ++ + TYN+++D GK + D + + M + +P
Sbjct: 491 CKLGNLQNAMELFQKMK-EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV-SKEILP 548
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELC 124
++ I+ + + EA ++++ +K V CN ++ C + + +
Sbjct: 549 TPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFL 608
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKR--GVVKDLHSYSI 182
+ + G V YN ++ G+ + K ++M++ G+V D+ +Y+
Sbjct: 609 ----EKMISEGFVP--DCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNS 662
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ C+ + +A + ++M ++G+ D Y +I + + A R++ EM + G
Sbjct: 663 ILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Query: 243 CQP 245
P
Sbjct: 723 FSP 725
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 164/342 (47%), Gaps = 11/342 (3%)
Query: 26 HFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNE 85
+ T T+N++I L + + LI RM P+ T+ + ++
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQ-PDLFTYGTVVNGLCKRGDIDL 238
Query: 86 AMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI 144
A+ K+++ ++ D V Y ++DALC YK+V +A L F E N G V
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNL-FTEMDNKGIRPNV-----VT 292
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++R W +M +R + ++ ++S +D K GK +A KLY EM
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K+ I D+ Y+++I + + +D A ++ M C P+VVT NT+IK C+ RV
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE---ILGLFDRMIESGIRPKMDTYVMLL 321
E + EM ++G V + +TY+ + L + + +F +M+ G+ P + TY +LL
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
++G L VV++ +++ PD + YN +++ + G
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 168/351 (47%), Gaps = 11/351 (3%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
+N ++ + K +FDL +L RM++ S + ++ I+ + + A+ K+
Sbjct: 83 FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLY-SYNILINCFCRRSQLPLALAVLGKM 141
Query: 94 DEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ G + D V+ +L++ C K + EA L + F + N T +N ++ G
Sbjct: 142 MKLGYEPDIVTLSSLLNGYCHGKRISEAVALV-----DQMFVMEYQPN-TVTFNTLIHGL 195
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
F + + + M RG DL +Y ++ +CK G A+ L K+M+K I+ DV
Sbjct: 196 FLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV 255
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V Y T+I A+ + V+ A+ ++ EM G +P+VVT N++I+ LC GR +A +L++
Sbjct: 256 VIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 315
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M ++ P+V+T+ K +++ L+D MI+ I P + TY L+ F
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
L +++ M C P+ YN L+ ++ + EM +GL
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 169/364 (46%), Gaps = 34/364 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +V++ L K + DL+ +L+ +M+ + + + VN+A+ F +
Sbjct: 222 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIE-ADVVIYTTIIDALCNYKNVNDALNLFTE 280
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE-----NKNV-GFSGLV-------- 137
+D G++ + V+Y +L+ LC Y +A L N NV FS L+
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340
Query: 138 ---------EMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
EM K I Y+ ++ G+ + + +E M + ++ +Y+
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ CK+ + + ++L++EM ++G+ + V YNT+I+ + + D A +++++M G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG-- 300
P ++T + ++ LC+ G++ +A V + K PD+ TY+ + K ++
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGW 520
Query: 301 -LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
LF + G++P + Y ++ F R G ++++M+E G P+ YN L+ A
Sbjct: 521 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRAR 580
Query: 360 IDKG 363
+ G
Sbjct: 581 LRDG 584
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 102/221 (46%), Gaps = 3/221 (1%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+ + EM + + + ++ + + K K + L + M+ I D+ +YN +I
Sbjct: 66 DLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCF 125
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
+ A+ V +M ++G +P +VT ++++ C R+ EA A++ +M P+
Sbjct: 126 CRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNT 185
Query: 283 ITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
+T++ L K E + L DRM+ G +P + TY ++ + G + + KK
Sbjct: 186 VTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK 245
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
ME+ D Y ++DAL + ++ A EM KG+
Sbjct: 246 MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 122/268 (45%), Gaps = 14/268 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+S+I+ D + ++ M + PN T+ + K + A V E M F +
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMI-SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + GL + V+Y L+ L + AQ++ F + + G + Y+++L G
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI-FKKMVSDGVPPDI-----ITYSILLDG 474
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K K +E + K + D+++Y+I ++ MCK+GK L+ + KG+K +
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534
Query: 212 VVAYNTVIRAV---GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
V+ Y T+I G+ E D ++REM+E G P+ T NT+I+ +G +
Sbjct: 535 VIIYTTMISGFCRKGLKEEAD---ALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAE 591
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPR 296
++ EM G V D T L R
Sbjct: 592 LIKEMRSCGFVGDASTISMVINMLHDGR 619
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 3/176 (1%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
AV L+ EM + +V +N ++ A+ D + + M+ + + + N +I
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRP 312
C ++ A AVL +M K G PD++T ++ E + L D+M +P
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
T+ L+ + +M GC PD F Y +V+ L +G +D+A
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 164/342 (47%), Gaps = 11/342 (3%)
Query: 26 HFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNE 85
+ T T+N++I L + + LI RM P+ T+ + ++
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQ-PDLFTYGTVVNGLCKRGDIDL 222
Query: 86 AMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI 144
A+ K+++ ++ D V Y ++DALC YK+V +A L F E N G V
Sbjct: 223 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNL-FTEMDNKGIRPNV-----VT 276
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++R W +M +R + ++ ++S +D K GK +A KLY EM
Sbjct: 277 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 336
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K+ I D+ Y+++I + + +D A ++ M C P+VVT NT+IK C+ RV
Sbjct: 337 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 396
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE---ILGLFDRMIESGIRPKMDTYVMLL 321
E + EM ++G V + +TY+ + L + + +F +M+ G+ P + TY +LL
Sbjct: 397 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 456
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
++G L VV++ +++ PD + YN +++ + G
Sbjct: 457 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 498
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 168/351 (47%), Gaps = 11/351 (3%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
+N ++ + K +FDL +L RM++ S + ++ I+ + + A+ K+
Sbjct: 67 FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLY-SYNILINCFCRRSQLPLALAVLGKM 125
Query: 94 DEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ G + D V+ +L++ C K + EA L + F + N T +N ++ G
Sbjct: 126 MKLGYEPDIVTLSSLLNGYCHGKRISEAVALV-----DQMFVMEYQPN-TVTFNTLIHGL 179
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
F + + + M RG DL +Y ++ +CK G A+ L K+M+K I+ DV
Sbjct: 180 FLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV 239
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V Y T+I A+ + V+ A+ ++ EM G +P+VVT N++I+ LC GR +A +L++
Sbjct: 240 VIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 299
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M ++ P+V+T+ K +++ L+D MI+ I P + TY L+ F
Sbjct: 300 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 359
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
L +++ M C P+ YN L+ ++ + EM +GL
Sbjct: 360 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 410
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 169/364 (46%), Gaps = 34/364 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +V++ L K + DL+ +L+ +M+ + + + VN+A+ F +
Sbjct: 206 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIE-ADVVIYTTIIDALCNYKNVNDALNLFTE 264
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE-----NKNV-GFSGLV-------- 137
+D G++ + V+Y +L+ LC Y +A L N NV FS L+
Sbjct: 265 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 324
Query: 138 ---------EMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
EM K I Y+ ++ G+ + + +E M + ++ +Y+
Sbjct: 325 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 384
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ CK+ + + ++L++EM ++G+ + V YNT+I+ + + D A +++++M G
Sbjct: 385 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 444
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG-- 300
P ++T + ++ LC+ G++ +A V + K PD+ TY+ + K ++
Sbjct: 445 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGW 504
Query: 301 -LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
LF + G++P + Y ++ F R G ++++M+E G P+ YN L+ A
Sbjct: 505 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRAR 564
Query: 360 IDKG 363
+ G
Sbjct: 565 LRDG 568
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 102/221 (46%), Gaps = 3/221 (1%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+ + EM + + + ++ + + K K + L + M+ I D+ +YN +I
Sbjct: 50 DLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCF 109
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
+ A+ V +M ++G +P +VT ++++ C R+ EA A++ +M P+
Sbjct: 110 CRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNT 169
Query: 283 ITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
+T++ L K E + L DRM+ G +P + TY ++ + G + + KK
Sbjct: 170 VTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK 229
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
ME+ D Y ++DAL + ++ A EM KG+
Sbjct: 230 MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 270
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 109/236 (46%), Gaps = 13/236 (5%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
PN T+ + K + A V E M F ++ + GL + V+Y L+ L + AQ++
Sbjct: 377 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 436
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + + G + Y+++L G K K +E + K + D+++Y+I
Sbjct: 437 -FKKMVSDGVPPDI-----ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 490
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV---GVSEGVDFAMRVYREMRE 240
++ MCK+GK L+ + KG+K +V+ Y T+I G+ E D ++REM+E
Sbjct: 491 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD---ALFREMKE 547
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR 296
G P+ T NT+I+ +G + ++ EM G V D T L R
Sbjct: 548 DGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 603
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 3/176 (1%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
AV L+ EM + +V +N ++ A+ D + + M+ + + + N +I
Sbjct: 48 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 107
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRP 312
C ++ A AVL +M K G PD++T ++ E + L D+M +P
Sbjct: 108 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 167
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
T+ L+ + +M GC PD F Y +V+ L +G +D+A
Sbjct: 168 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 164/350 (46%), Gaps = 13/350 (3%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TYNS+I L K +++L+ M + IP+ T+ + + + ++A+
Sbjct: 114 TAVTYNSLISGLCKAERASEAYDLLEEMVYS-GCIPDIFTYTTLITGFCKSKKSDDALRV 172
Query: 90 FNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
F +L G + D V+Y L+D LC+ + EA +L FG G M T YN +
Sbjct: 173 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDL-FGRMIKSGSC----MPNTVTYNSL 227
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G+ +M + E M + G D+ +Y+ M+ CK + A L +M +KG+
Sbjct: 228 ISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGL 287
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
DVV + +++ + + A+ + EMR C P+V T NT++ C ++ EA
Sbjct: 288 TPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARK 347
Query: 269 VLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ E + C P+V++++ R L + E + L + P + Y ++
Sbjct: 348 FMLE--EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLC 405
Query: 326 RWGFLRPVFVVWKKM-EELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
R + V++KM EE GC P+ Y+ LV L + GMLD AR Y E+
Sbjct: 406 REKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIEK 455
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 139/286 (48%), Gaps = 11/286 (3%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWG 159
D V+Y +L+ LC+ K +E + G+ + GF V Y ++ +
Sbjct: 10 DFVTYTSLIQGLCKVKR-LEQALIFLGKMVSKGFHPDV-----YTYTAVIHALCVENRLH 63
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+ R+F EEM R + ++ +Y++ +D +CK G+ +AV L +M+KK + V YN++I
Sbjct: 64 EARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPT-AVTYNSLI 122
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
+ +E A + EM GC P + T T+I C++ + +A V ++ +G
Sbjct: 123 SGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFR 182
Query: 280 PDVITYHCFFRCLEKP---REILGLFDRMIESG-IRPKMDTYVMLLRKFGRWGFLRPVFV 335
PDV+TY C L K +E + LF RMI+SG P TY L+ F R G +
Sbjct: 183 PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN 242
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ ++M E G SPD Y L++ LD A +M KGL+
Sbjct: 243 LLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLT 288
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 150/331 (45%), Gaps = 13/331 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +VI L + + M N + PN T+ ++ V+EA+ +K
Sbjct: 48 TYTAVIHALCVENRLHEARKFLEEMA-NRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSK 106
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ + + V+Y +L+ LC+ + EA +L + + +SG + Y ++ G+
Sbjct: 107 MRKKCVPTAVTYNSLISGLCKAERASEAYDLL----EEMVYSGCIP--DIFTYTTLITGF 160
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM-D 211
K +E++ RG D+ +YS +D +CK G+ +A+ L+ M K G M +
Sbjct: 161 CKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPN 220
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V YN++I +D AM + M E G P VVT T++ C+ R+ +AY +L
Sbjct: 221 TVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLN 280
Query: 272 EMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+M +KG PDV+T+ L + + + + M P + TY +L + R
Sbjct: 281 QMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRAN 340
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
L +EE+ C P+ ++N ++ L
Sbjct: 341 QLEEARKFM--LEEMDCPPNVVSFNIMIRGL 369
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 102/223 (45%), Gaps = 5/223 (2%)
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
D +Y+ + +CK + +A+ +M KG DV Y VI A+ V + A +
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL--- 292
EM P+VVT +I LC+ GRV EA A+L++M KK CVP +TY+ L
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLCKA 128
Query: 293 EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
E+ E L + M+ SG P + TY L+ F + V++++ G PD Y
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+ L+D L +G L A M G S P L+ G
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSG-SCMPNTVTYNSLISG 230
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 59/141 (41%), Gaps = 4/141 (2%)
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREI 298
C VT ++I+ LC+ R+ +A L +M KG PDV TY C+E + E
Sbjct: 6 SCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEA 65
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+ M + P + TY +L+ + G + + KM + C P YN+L+
Sbjct: 66 RKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISG 124
Query: 359 LIDKGMLDMARKYDEEMFAKG 379
L A EEM G
Sbjct: 125 LCKAERASEAYDLLEEMVYSG 145
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 160/365 (43%), Gaps = 8/365 (2%)
Query: 15 LEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
++FF W ++ H T TY ++I L ++ W +I M NP + +
Sbjct: 103 MQFFRWAAKKRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDII 162
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFS 134
+ A ++++A+ F ++ + N + + ++ E + E N G
Sbjct: 163 RMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHC 222
Query: 135 GLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPW 194
T Y+ ++ + K+ EM G+ Y++ + + K
Sbjct: 223 ----FPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVH 278
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
A+ L++EM+ + + DV Y +IR +G + D A + EMR GC+P V N +I
Sbjct: 279 GALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMI 338
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL----EKPREILGLFDRMIESGI 310
L + GR+ +A + EM C+P V+TY+ + L + EI F+RM SGI
Sbjct: 339 NFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGI 398
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
P TY +L+ F + ++ ++M+E G P AY +L+DAL D+A +
Sbjct: 399 SPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHE 458
Query: 371 YDEEM 375
+E+
Sbjct: 459 LFQEL 463
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 179/408 (43%), Gaps = 35/408 (8%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+ +++ E +N + + H T TY+++I K D + L++ MKDN P
Sbjct: 202 HEGQYEKVHELYNEMSNEGHCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQ-PT 260
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKL-DEFGLKDEVSYCNLVDALCEYKHVIEA----- 120
+ ++ + + V+ A+G F ++ ++ D +Y L+ L + EA
Sbjct: 261 AKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFH 320
Query: 121 ---QELCFGE----NKNVGFSG-----------LVEMNKTK------IYNMILRGWFKM- 155
+E C + N + F G EM + YN I++ F+
Sbjct: 321 EMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESK 380
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
S + ++E M G+ +YSI +D CK+ + KA+ L +EM +KG AY
Sbjct: 381 SRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAY 440
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
++I A+G ++ D A +++E++E S +IK L + GR+ +A + EM K
Sbjct: 441 CSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNK 500
Query: 276 KGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
GC P+V Y+ L + E L RM E G P +++Y ++L + G
Sbjct: 501 LGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHR 560
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ M++ PD +YN ++ A+ G+ + A K +EM G
Sbjct: 561 AMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGF 608
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 149/331 (45%), Gaps = 10/331 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +I LGK FD ++N H M+ P+ M A +++A+ F +
Sbjct: 298 TYTELIRGLGKAGRFDEAYNFFHEMRREGCR-PDTVVINNMINFLGKAGRLDDAVKLFEE 356
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + V+Y ++ AL E K I F K G S Y++++ G
Sbjct: 357 MGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISP-----SPFTYSILIDG 411
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K + K EEMD++G +Y +D + K+ + A +L++E+K+
Sbjct: 412 FCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSS 471
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
Y +I+ +G + +D A+ ++ EM ++GC P+V N ++ L G + EA +
Sbjct: 472 ARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMR 531
Query: 272 EMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M + GC+PD+ +Y+ L K P + + M +S I+P +Y +L G
Sbjct: 532 RMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAG 591
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ K+M LG D Y+++++A+
Sbjct: 592 LFEEAAKLMKEMNVLGFEYDLITYSSILEAI 622
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 124/267 (46%), Gaps = 15/267 (5%)
Query: 33 TYNSVIDIL----GKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
TYN++I L + E SW RMK + S P+ T+ I+ + + +AM
Sbjct: 368 TYNTIIKALFESKSRISEIS-SW--FERMKGSGIS-PSPFTYSILIDGFCKTNRTEKAMM 423
Query: 89 TFNKLDEFGLKD-EVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
++DE G +YC+L+DAL + K A EL +N G S ++Y +
Sbjct: 424 LLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSS------ARVYAV 477
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
+++ K ++EM+K G ++++Y+ M + ++G +A+ + M++ G
Sbjct: 478 MIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHG 537
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
D+ +YN ++ + + G AM + M++ +P V+ NTV+ + G EA
Sbjct: 538 CIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAA 597
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEK 294
++ EM G D+ITY + K
Sbjct: 598 KLMKEMNVLGFEYDLITYSSILEAIGK 624
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 101/213 (47%), Gaps = 14/213 (6%)
Query: 178 HSYSIYM------DIMCKSGKPWKAVKLYKEMKKKGI-KMDVVAYNTVIRAVGVSEGVDF 230
H S YM +++ + G+ WK ++ EM + + + + + +IR +G ++ +
Sbjct: 117 HDTSTYMALIRCLEVVEQYGEMWKMIQ---EMVRNPVCVVTPMELSDIIRMLGNAKMISK 173
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG-CVPDVITYHCFF 289
A+ ++ +++ CQP+ N++I +L G+ + + + EM +G C PD +TY
Sbjct: 174 AVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALI 233
Query: 290 RC---LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
L + + L + M ++G++P Y ML+ F + + ++++M C
Sbjct: 234 SAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCR 293
Query: 347 PDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
PD F Y L+ L G D A + EM +G
Sbjct: 294 PDVFTYTELIRGLGKAGRFDEAYNFFHEMRREG 326
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 156/328 (47%), Gaps = 10/328 (3%)
Query: 59 DNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHV 117
+N +P T+ M + + LV A F ++ GL D ++Y +L++ C+ ++
Sbjct: 1217 ENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNL 1276
Query: 118 IEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
EA L FG+ + G + V YN+++ G+ ++ + R EEM ++G + ++
Sbjct: 1277 KEAL-LLFGDLRRAGLAPTV-----LTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNV 1330
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
+Y+I M A + + EM KG++ D AYNT I A + + A +
Sbjct: 1331 CTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREV 1390
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC-LEKP- 295
+ G VT N +I LC+ G +++A + +M G PD ITY C E+
Sbjct: 1391 LMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGL 1450
Query: 296 -REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
RE +F+ MI G+ P T+ +++ + R G L + ++KM E G P+E YN
Sbjct: 1451 LREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNV 1510
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLSA 382
L+ AL G +A + EM +GL A
Sbjct: 1511 LIHALCRMGRTQLASHHFHEMLERGLVA 1538
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 127/297 (42%), Gaps = 41/297 (13%)
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
LC + + G+ K N +LR + W EEM + G+ + +Y+
Sbjct: 1067 LCLSAFREMASHGVAP--DVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNT 1124
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIK--MDVVAYNTVI----------RAVGVSEGVDF 230
+D K G+ K L KEM+ +G + V YN VI A + EG+
Sbjct: 1125 LLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRL 1184
Query: 231 AMRVYR------------------------EMREMGCQPSVVTCNTVIKLLCENGRVREA 266
+ + EM G P+VVT N +I L ++G V A
Sbjct: 1185 SKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAA 1244
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRK 323
AEM G +PDVITY+ K +E L LF + +G+ P + TY +L+
Sbjct: 1245 QVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDG 1304
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ R G L ++ ++M E GC P+ Y L+ ++ L MAR++ +EM +KGL
Sbjct: 1305 YCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGL 1361
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 130/295 (44%), Gaps = 28/295 (9%)
Query: 98 LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSW 157
L ++V+Y ++ L + EA EL G + S YN ++ G
Sbjct: 1153 LPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFT-------YNPLITGLLARGC 1205
Query: 158 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
K + EM+ G++ + +Y+ + + +SG A + EM+ G+ DV+ YN+
Sbjct: 1206 VKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNS 1265
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
++ + + A+ ++ ++R G P+V+T N +I C G + EA + EM ++G
Sbjct: 1266 LLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQG 1325
Query: 278 CVPDVITYHCFF------RCLEKPREILGLFDRMIESGIRPKMDTY------VMLLRKFG 325
C+P+V TY R L RE FD M+ G++P Y ++L
Sbjct: 1326 CLPNVCTYTILMKGSLNVRSLAMARE---FFDEMLSKGLQPDCFAYNTRICAELILGDIA 1382
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
R LR V ++ G S D YN L+ L G L A++ +M + GL
Sbjct: 1383 RAFELREVLMLE------GISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGL 1431
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 138/326 (42%), Gaps = 18/326 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A + K AL F + T TYN +ID + + + + L M + +P
Sbjct: 1271 CKAGNLKEALLLFGDLRR-AGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQ-GCLP 1328
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDA---LCEYKHVIEAQ 121
N T+ I+ K + + A F+++ GL+ D +Y + A L + E +
Sbjct: 1329 NVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELR 1388
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
E+ E G S + T YN+++ G K +E +M G+ D +Y+
Sbjct: 1389 EVLMLE----GIS-----SDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYT 1439
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+ C+ G +A K++ M G+ V + +I A + A +R+M E
Sbjct: 1440 CLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEE 1499
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF--RC-LEKPREI 298
G +P+ +T N +I LC GR + A EM ++G V + TY C + +
Sbjct: 1500 GVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDA 1559
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKF 324
+ + M ++GI P T+ LL+ F
Sbjct: 1560 MRFYFEMHQNGIHPDYLTHKALLKGF 1585
Score = 38.1 bits (87), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 299 LGLFDRMIESGIRPKM---DTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
L F M G+ P + + + +LR RW + V ++M ELG P YN L
Sbjct: 1069 LSAFREMASHGVAPDVKDCNRVLRVLRDAARWD---DICAVHEEMLELGIEPSIVTYNTL 1125
Query: 356 VDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+D+ + +G D +EM +G P + ++ G
Sbjct: 1126 LDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITG 1165
>gi|115445705|ref|NP_001046632.1| Os02g0304800 [Oryza sativa Japonica Group]
gi|113536163|dbj|BAF08546.1| Os02g0304800 [Oryza sativa Japonica Group]
Length = 617
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 170/376 (45%), Gaps = 19/376 (5%)
Query: 15 LEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
++FF+W + + DT N VI LG+ F + M+ N S P+ +T I+
Sbjct: 124 VDFFDWAIANSKLPPSVDTCNIVIRALGRRKFFAFFEPALEIMRKNGVS-PDISTLEIII 182
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGL-------KDEVSYCNLVDALCEYKHVIEAQELCFGE 127
+ A VN A+ N D FGL + E+ + L++ LC HV A L
Sbjct: 183 DSLIAARHVNTAIQLINT-DHFGLGVWQTCQRKEI-FTVLINCLCRRSHVGLASSLLQAS 240
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
++++ +YN ++ GW + K FWE M + G+V D SY ++ +
Sbjct: 241 RGET-----IDLDN-HMYNEVIGGWARFGRVDKVEHFWETMLEDGLVPDQVSYCHLIEAL 294
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
++ + +A++++++M +G +AYN +I D ++ Y++M + C P++
Sbjct: 295 GRANRAEEALQVFEKMVHEGYCPTTMAYNALIFNFISVGNFDRCIKYYKDMLDNNCPPNI 354
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDR 304
T +I+ +V +A + EM +G +P F L P L ++ R
Sbjct: 355 DTYRKMIRAFLRERKVADALQMFDEMLSRGILPSTGMITLFIEPLCTFGPPHAALLIYKR 414
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
++G R M Y +LL + +G V +W++M+E G D+ Y +V+ L + G
Sbjct: 415 SRKAGCRISMKAYKLLLERLAMFGKSGTVLQIWEEMQESGHPSDKEIYEFIVNGLCNVGK 474
Query: 365 LDMARKYDEEMFAKGL 380
+D A EE KG
Sbjct: 475 VDAAVSVVEESIRKGF 490
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 105/248 (42%), Gaps = 46/248 (18%)
Query: 81 HLVNEAMG---TFNKLD----------EFGL-KDEVSYCNLVDALCEYKHVIEAQELCFG 126
H+ NE +G F ++D E GL D+VSYC+L++AL EA ++ F
Sbjct: 250 HMYNEVIGGWARFGRVDKVEHFWETMLEDGLVPDQVSYCHLIEALGRANRAEEALQV-FE 308
Query: 127 ENKNVGFSGLVEMNKTKIYNMI------------------------------LRGWFKMS 156
+ + G+ I+N I +R + +
Sbjct: 309 KMVHEGYCPTTMAYNALIFNFISVGNFDRCIKYYKDMLDNNCPPNIDTYRKMIRAFLRER 368
Query: 157 WWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
+ ++EM RG++ +++++ +C G P A+ +YK +K G ++ + AY
Sbjct: 369 KVADALQMFDEMLSRGILPSTGMITLFIEPLCTFGPPHAALLIYKRSRKAGCRISMKAYK 428
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
++ + + ++++ EM+E G ++ LC G+V A +V+ E +K
Sbjct: 429 LLLERLAMFGKSGTVLQIWEEMQESGHPSDKEIYEFIVNGLCNVGKVDAAVSVVEESIRK 488
Query: 277 G-CVPDVI 283
G C+ V+
Sbjct: 489 GFCLGRVV 496
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 99/237 (41%), Gaps = 13/237 (5%)
Query: 8 ANDWKRALEFFNWVETDCH--FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
AN + AL+ F E H + TT YN++I FD M DN + P
Sbjct: 297 ANRAEEALQVF---EKMVHEGYCPTTMAYNALIFNFISVGNFDRCIKYYKDMLDN-NCPP 352
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNL-VDALCEYKHVIEAQELC 124
N T+R M + ++ V +A+ F+++ G+ L ++ LC + A L
Sbjct: 353 NIDTYRKMIRAFLRERKVADALQMFDEMLSRGILPSTGMITLFIEPLCTFGPP-HAALLI 411
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+ ++ G + M K Y ++L G + WEEM + G D Y +
Sbjct: 412 YKRSRKAGCR--ISM---KAYKLLLERLAMFGKSGTVLQIWEEMQESGHPSDKEIYEFIV 466
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+ +C GK AV + +E +KG + V Y + + V+ A ++++ R +
Sbjct: 467 NGLCNVGKVDAAVSVVEESIRKGFCLGRVVYGKLNNKLLEMNKVETAYNLFKKKRNV 523
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 154/324 (47%), Gaps = 16/324 (4%)
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N T I+ + H V+ F K + G K D V + L+D +C I EL
Sbjct: 74 NVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCR----IGKTELA 129
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
G K +G G V T N ++RG+ K R+ + M +G+ D++SYSI++
Sbjct: 130 AGLLKEMGLVGCVPDVVT--CNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFI 187
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ CK K +A++L+ EM +G+ + V YNT+I+A+ + A ++R+M G
Sbjct: 188 NGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLS 247
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCLEKPREI 298
P ++ +T++ C+ G + E + EM ++ PD++ Y C R ++ +E+
Sbjct: 248 PDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEV 307
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
L R+I G++P + TY L+ R G + +++KMEE GC P +YN L+
Sbjct: 308 L---SRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQG 364
Query: 359 LIDKGMLDMARKYDEEMFAKGLSA 382
+ + EM +G A
Sbjct: 365 CLQHNDTSTVVQLIHEMADRGFYA 388
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 116/245 (47%), Gaps = 12/245 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
P+ ++ I Y ++EAM F+++ G+ + V+Y L+ ALC+ +AQ L
Sbjct: 178 PDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVL 237
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + G S Y+ +L G+ K + ++EM +R V DL Y+I
Sbjct: 238 -FRKMCACGLS-----PDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTII 291
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
++ MC+S K A ++ + +G+K DV Y ++ + + A+R++R+M E GC
Sbjct: 292 INGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGC 351
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT---YHCFFRCLEKP--REI 298
P + N +++ ++ ++ EM +G D +T F + P +++
Sbjct: 352 MPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAVTRTFLKDFLPGNDSPAIKQL 411
Query: 299 LGLFD 303
LGLF+
Sbjct: 412 LGLFE 416
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 171/416 (41%), Gaps = 67/416 (16%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTA-------HL 82
T +YN+VI L + D ++ + M DN P+ F + + A L
Sbjct: 6 TIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCE-PDVIAFTTLIHGFCKAGQPQVGHKL 64
Query: 83 VNEAM-------------------------GTFNKLDEFGLKDEVSYCNLVDALCEYKHV 117
+N+A+ G F + D +SY ++ L + K +
Sbjct: 65 LNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRI 124
Query: 118 IEAQELCFGENKNVGFS-----------GLVEMNKTK-------------------IYNM 147
EA EL F E K G S GL++ + + Y +
Sbjct: 125 DEACEL-FEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTV 183
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++ G K + +E+M ++G V D +Y+ +D K+ K +A KL M KG
Sbjct: 184 VIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKG 243
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ V Y +++ + ++ A V +MRE GC+P + +++ GR EAY
Sbjct: 244 PEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAY 303
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
VL EM +GC PDVI Y L + E +FD MIE G P TY +++ F
Sbjct: 304 QVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNF 363
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ G + + + M + G PD FAYN+L+D + +D A + M A G+
Sbjct: 364 SKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGI 419
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 185/432 (42%), Gaps = 53/432 (12%)
Query: 10 DWKR---ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
D KR A E F ++T + Y +VID L K + M + S +P
Sbjct: 120 DSKRIDEACELFEELKT-AGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGS-SCVPT 177
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCF 125
T+ ++ A ++ +A F ++ + G + D ++Y L+D + + EA++L
Sbjct: 178 RTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLL- 236
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
+V + E Y I+ G+ K+ + +E +M +RG L ++ +
Sbjct: 237 ----DVMLTKGPEPTAVT-YGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLS 291
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
G+ +A ++ EM +G DV+ Y ++I + + V A V+ M E GC P
Sbjct: 292 YYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAP 351
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLF 302
+T T+I+ + G V A +L M K G PD Y+ + LE+ + G++
Sbjct: 352 DALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVY 411
Query: 303 DRMIESGIRP----------------KMD--------------------TYVMLLRKFGR 326
DRM+ SGI+P K D +Y +L+ G+
Sbjct: 412 DRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGK 471
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPRE 386
G + F+ +++M + G P+ Y +L+ +L G + A+K E+M G++ P
Sbjct: 472 AGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVN--PDV 529
Query: 387 ELGTKLVQGGLD 398
+ + L+ G +D
Sbjct: 530 QAYSALITGLID 541
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 161/386 (41%), Gaps = 27/386 (6%)
Query: 6 CYANDWKRALEFF-NWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM-KDNPSS 63
C A A + F V+ C T TY ++ID K + D + L+ M P
Sbjct: 189 CKAQMLPDACKVFEQMVQKGC--VPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPE- 245
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQEL 123
P T+ + + ++NEA ++ E G E L Y A+E
Sbjct: 246 -PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGC--EPGLFIFTSLLSYYLSKGRAEE- 301
Query: 124 CFGENKNVGFSGLVEMNK------TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
+ L EM +Y ++ F + R ++ M ++G D
Sbjct: 302 --------AYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDA 353
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
+Y + K G A ++ + M K G+ D AYN+++ E VD A VY
Sbjct: 354 LTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDR 413
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV-PDVITYHCFFRCLEKP- 295
M G +P+ VT N ++ L ++G+ A+++ EM +K V P +++Y L K
Sbjct: 414 MVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAG 473
Query: 296 --REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
E F MI+ GI P+ TY L+ + G + + + M +LG +PD AY+
Sbjct: 474 RVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYS 533
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKG 379
AL+ LID M+D A +EM +G
Sbjct: 534 ALITGLIDSSMVDTAWDVFQEMMKRG 559
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 152/369 (41%), Gaps = 23/369 (6%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TY S++ K + + +I +M++ P F + Y++ EA
Sbjct: 247 TAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCE-PGLFIFTSLLSYYLSKGRAEEAYQV 305
Query: 90 FNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIY 145
++ G D + Y +L+D L V EA+ + F ++E Y
Sbjct: 306 LTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHV---------FDSMIEKGCAPDALTY 356
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
I++ + K+ E E M K GV D +Y+ MD K + +A +Y M
Sbjct: 357 GTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVA 416
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG-CQPSVVTCNTVIKLLCENGRVR 264
GIK + V +N ++ + D A +++EM E P++V+ +I L + GRV
Sbjct: 417 SGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVS 476
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLL 321
EA+ EM +G +P+ TY L K I L + M++ G+ P + Y L+
Sbjct: 477 EAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALI 536
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ + V+++M + GC+P+E Y L +G R D E + S
Sbjct: 537 TGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL-----RRGFRAAGRALDLEAVKQHFS 591
Query: 382 AKPREELGT 390
E G+
Sbjct: 592 QGVAMEAGS 600
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 3/189 (1%)
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
G + +V+YNTVI + + +D A + + M + GC+P V+ T+I C+ G+ +
Sbjct: 2 GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
+ +L + K+ PDV Y K ++ + R + + +Y +++
Sbjct: 62 HKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLAD 120
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPRE 386
+ ++++++ GCSP+ AY A++D L+ G ++ K EEM G S P
Sbjct: 121 SKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEM--SGSSCVPTR 178
Query: 387 ELGTKLVQG 395
T ++ G
Sbjct: 179 TTYTVVIDG 187
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 170/351 (48%), Gaps = 11/351 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+++++I +L K D + MK N P++ + I+ + +++EA+ ++
Sbjct: 239 SFSALIGLLSKNGCLDQALKYFRDMK-NAGLAPDNVIYTILIGGFCRNGVMSEALKVRDE 297
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G + D V+Y +++ LC+ K + EA EL F E G + ++ G
Sbjct: 298 MLEQGCVLDVVTYNTILNGLCKEKMLSEADEL-FTEMTERGV-----FPDFYTFTTLING 351
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K K +E M +R + D+ +Y+ +D CK + K +L+ +M + I +
Sbjct: 352 YSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPN 411
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
++Y +I V A R++ EM E G + +++TCNT++K C G +A L+
Sbjct: 412 HISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLS 471
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M KG VPD ITY+ K + L ++M SG+ P + TY ++L F R G
Sbjct: 472 NMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQG 531
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++ ++ KM E G +PD Y +L++ + + L A + +EM +G
Sbjct: 532 RMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRG 582
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 165/354 (46%), Gaps = 11/354 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T N +I+ L K + + + + + M++ P+ T+ + Y L+ EA +
Sbjct: 99 TLNIMINALCKNQKIENTKSFLSDMEE-KGVFPDVVTYNTLINAYCRQGLLEEAFELMDS 157
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ GLK V +Y +++ LC+ + A+ + E +G S T YN++L
Sbjct: 158 MSGKGLKPCVFTYNAIINGLCKTGKYLRAKGV-LDEMLKIGMSP-----DTATYNILLVE 211
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ ++EM +GVV DL S+S + ++ K+G +A+K +++MK G+ D
Sbjct: 212 CCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPD 271
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V Y +I + + A++V EM E GC VVT NT++ LC+ + EA +
Sbjct: 272 NVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFT 331
Query: 272 EMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM ++G PD T+ K + + LF+ MI+ ++P + TY L+ F +
Sbjct: 332 EMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGS 391
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ V +W M P+ +Y L++ + G + A + +EM KG A
Sbjct: 392 EMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEA 445
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 155/333 (46%), Gaps = 11/333 (3%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
+ + NS++ L K DL+W + + + + N T IM +
Sbjct: 61 SINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQV-NVYTLNIMINALCKNQKIENTKSF 119
Query: 90 FNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
+ ++E G+ D V+Y L++A C + EA EL ++ GL T YN I
Sbjct: 120 LSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELM----DSMSGKGLKPCVFT--YNAI 173
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G K + + + +EM K G+ D +Y+I + C++ A +++ EM +G+
Sbjct: 174 INGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGV 233
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
D+V+++ +I + + +D A++ +R+M+ G P V +I C NG + EA
Sbjct: 234 VPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALK 293
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFG 325
V EM ++GCV DV+TY+ L K + E LF M E G+ P T+ L+ +
Sbjct: 294 VRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYS 353
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+ G + +++ M + PD YN L+D
Sbjct: 354 KDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDG 386
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 20/272 (7%)
Query: 112 CEYKHVIEAQELCFGENK-NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDK 170
CE V++++ LC N N GLV++ GW ++W E ++E+ +
Sbjct: 47 CEAFRVLKSKGLCVSINACNSLLGGLVKV-----------GWVDLAW-----EIYQEVVR 90
Query: 171 RGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF 230
GV ++++ +I ++ +CK+ K +M++KG+ DVV YNT+I A ++
Sbjct: 91 SGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEE 150
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF- 289
A + M G +P V T N +I LC+ G+ A VL EM K G PD TY+
Sbjct: 151 AFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLV 210
Query: 290 RCLEKPREILG--LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
C + +FD M G+ P + ++ L+ + G L ++ M+ G +P
Sbjct: 211 ECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAP 270
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
D Y L+ G++ A K +EM +G
Sbjct: 271 DNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 302
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 138/283 (48%), Gaps = 15/283 (5%)
Query: 116 HVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVK 175
++E+ L +G N G + LV +++++R + + + E + + +G+
Sbjct: 11 EIVESLVLTYG---NCGSNPLV-------FDLLVRTYVQARKLREGCEAFRVLKSKGLCV 60
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
+++ + + + K G A ++Y+E+ + G++++V N +I A+ ++ ++
Sbjct: 61 SINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFL 120
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP 295
+M E G P VVT NT+I C G + EA+ ++ M KG P V TY+ L K
Sbjct: 121 SDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKT 180
Query: 296 REIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
+ L G+ D M++ G+ P TY +LL + R + ++ +M G PD ++
Sbjct: 181 GKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSF 240
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+AL+ L G LD A KY +M GL+ P + T L+ G
Sbjct: 241 SALIGLLSKNGCLDQALKYFRDMKNAGLA--PDNVIYTILIGG 281
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 124/284 (43%), Gaps = 11/284 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++++ L K + L M + P+ TF + Y +N+A+ F
Sbjct: 309 TYNTILNGLCKEKMLSEADELFTEMTER-GVFPDFYTFTTLINGYSKDGNMNKAVTLFEM 367
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + LK D V+Y L+D C+ + + EL N S + N Y +++ G
Sbjct: 368 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELW-----NDMISRRIYPNHIS-YGILING 421
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ M + W+EM ++G + + + + C++G KA + M KGI D
Sbjct: 422 YCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPD 481
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ YNT+I E +D A + +M G P V+T N ++ GR++EA ++
Sbjct: 482 GITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIML 541
Query: 272 EMPKKGCVPDVITYHCFFR---CLEKPREILGLFDRMIESGIRP 312
+M ++G PD TY +E + D M++ G P
Sbjct: 542 KMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 585
>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
Length = 721
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 160/341 (46%), Gaps = 12/341 (3%)
Query: 59 DNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHV 117
+N +P T+ + + A F ++ GL D ++Y +L++ C+ ++
Sbjct: 335 ENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNL 394
Query: 118 IEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
EA L G+ + G + V YN ++ G+ ++ + R EEM ++G D+
Sbjct: 395 KEALWL-LGDLRRAGLAPTV-----LTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDV 448
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
+Y+I M+ K A + + EM KG++ D AYNT I A A ++
Sbjct: 449 CTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREV 508
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC-LEKP- 295
M G P VT N +I LC+ G +++A + +M G PD ITY C E+
Sbjct: 509 MMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGL 568
Query: 296 -REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
RE L + M+ G++P + TY +L+ R G L + ++KM ++G P+E YN
Sbjct: 569 LREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNV 628
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
L+ AL G +A ++ EM +GL+ P + T L+ G
Sbjct: 629 LIHALCMTGRTPLAFRHFHEMLERGLA--PNKYTYTLLIDG 667
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 113/240 (47%), Gaps = 8/240 (3%)
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N +LR + W R + EM + V + +Y+ +D K G+ +A L KEM+
Sbjct: 206 NRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMET 265
Query: 206 K--GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
+ G ++ V +N VI + ++ A+++ MR + + S T N +I L E G V
Sbjct: 266 QGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMR-LSKKASSFTYNPLITALLERGFV 324
Query: 264 REAYAVLAEMPKKGCVPDVITY----HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVM 319
R+A A+ EM +G +P V+TY H +C E+ F M G+ P + TY
Sbjct: 325 RKAEALQMEMENEGIMPTVVTYNAIIHGLLKC-EQAEAAQVKFAEMRAMGLLPDVITYNS 383
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
LL ++ + G L+ + + G +P YN L+D G L AR+ EEM +G
Sbjct: 384 LLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQG 443
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 155/385 (40%), Gaps = 47/385 (12%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TYN++I L K + + + M+ +P+ T+ + RY A + EA+
Sbjct: 342 TVVTYNAIIHGLLKCEQAEAAQVKFAEMRAM-GLLPDVITYNSLLNRYCKAGNLKEALWL 400
Query: 90 FNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
L GL V +Y L+D C + EA+ L + F + Y ++
Sbjct: 401 LGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVC------TYTIL 454
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G K+ REF++EM +G+ D +Y+ + A +L + M KGI
Sbjct: 455 MNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGI 514
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
D V YN +I + + + A R+ +M G QP +T +I CE G +REA
Sbjct: 515 YPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARK 574
Query: 269 VLAEMPKKGCVPDVITYHC-----------------FFRCLE---KPREI---------- 298
+L M G P V+TY F + L+ +P EI
Sbjct: 575 LLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALC 634
Query: 299 --------LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF 350
F M+E G+ P TY +L+ R G ++ +M + G PD
Sbjct: 635 MTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYC 694
Query: 351 AYNALVDALIDKGMLDMARKYDEEM 375
+NAL D+G + A +Y E +
Sbjct: 695 THNALFKGF-DEGHMYHAIEYMENI 718
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 107/240 (44%), Gaps = 3/240 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ + + K EM+ G++ + +Y+ + + K + A + EM+
Sbjct: 311 YNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMR 370
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
G+ DV+ YN+++ + + A+ + ++R G P+V+T NT+I C G +
Sbjct: 371 AMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLA 430
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLL 321
EA + EM ++GC PDV TY K R + FD M+ G++P Y +
Sbjct: 431 EARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRI 490
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
F + + M G PD YN ++D L G L A++ +M + GL
Sbjct: 491 CAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQ 550
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 15/211 (7%)
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+Y+ + + + G KA L EM+ +GI VV YN +I + E + A + EM
Sbjct: 310 TYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEM 369
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------HCFFRCL 292
R MG P V+T N+++ C+ G ++EA +L ++ + G P V+TY +C L
Sbjct: 370 RAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDL 429
Query: 293 EKPREILGLFDRMIESGIRPKMDTYVMLL---RKFGRWGFLRPVFVVWKKMEELGCSPDE 349
+ R L + M+E G P + TY +L+ RK R F +M G PD
Sbjct: 430 AEARR---LKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFF---DEMLSKGLQPDC 483
Query: 350 FAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
FAYN + A + MA + E M KG+
Sbjct: 484 FAYNTRICAELTLSSTPMAFQLREVMMLKGI 514
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 111/242 (45%), Gaps = 6/242 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH--SYSIYMDIMCKSGKPWKAVKLYKE 202
YN +L + K + +EM+ +G L+ ++++ + + + G AVKL
Sbjct: 240 YNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDS 299
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M+ K YN +I A+ V A + EM G P+VVT N +I L + +
Sbjct: 300 MRLSK-KASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQ 358
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVM 319
A AEM G +PDVITY+ K +E L L + +G+ P + TY
Sbjct: 359 AEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNT 418
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L+ + R G L + ++M E GC PD Y L++ L MAR++ +EM +KG
Sbjct: 419 LIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKG 478
Query: 380 LS 381
L
Sbjct: 479 LQ 480
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 8/180 (4%)
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
G+ DV N V+R + + D VY EM ++ +P++VT NT++ + GR EA
Sbjct: 197 GVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEA 256
Query: 267 YAVLAEMPKKG---CVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVML 320
+L EM +G + DV T++ L + + + L D M S + TY L
Sbjct: 257 SMLLKEMETQGGGFSLNDV-TFNVVISFLAREGHLENAVKLVDSMRLSK-KASSFTYNPL 314
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ GF+R + +ME G P YNA++ L+ + A+ EM A GL
Sbjct: 315 ITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGL 374
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 180/383 (46%), Gaps = 37/383 (9%)
Query: 33 TYNSVID-ILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
+YN+V+D + + N+ M + S PN T+ I+ + + A ++ A+ F+
Sbjct: 171 SYNAVLDATIRSKRNISFAENVFKEMLQSQVS-PNVFTYNILIRGFCLAGNLDVALRFFD 229
Query: 92 KLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCF------------------------G 126
++++ G L + V+Y L+D C+ + + + EL G
Sbjct: 230 RMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREG 289
Query: 127 ENKNVGFSGLVEMNKTK------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
K + F L EMNK YN +++G+ K + + EM + G+ + +Y
Sbjct: 290 RMKEISFV-LTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITY 348
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ + MCK+G +A + +M+ +G+ + Y T++ ++ A RV +EM +
Sbjct: 349 TSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMID 408
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI-- 298
G PSVVT N +I C G++ +A AVL +M +KG PDV++Y + ++
Sbjct: 409 NGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDE 468
Query: 299 -LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
L + +M+ GI+P TY L++ F + ++ +M +G PDEF Y AL++
Sbjct: 469 ALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALIN 528
Query: 358 ALIDKGMLDMARKYDEEMFAKGL 380
A +G L A + EM KG+
Sbjct: 529 AYCMEGDLQKAIQLHNEMVEKGV 551
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 166/380 (43%), Gaps = 22/380 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A + AL FF+ +E + TYN++ID K + D + L+ M P
Sbjct: 216 CLAGNLDVALRFFDRMEKKGCLPNVV-TYNTLIDGYCKLRKIDDGFELLRSMALKGLE-P 273
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKH-----VIE 119
N ++ ++ + E ++++ G DEV+Y L+ C+ + V+
Sbjct: 274 NLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMH 333
Query: 120 AQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
A+ L G + +V Y ++ K + EF ++M RG+ + +
Sbjct: 334 AEMLRHGLSPSV-----------ITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERT 382
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y+ +D + G +A ++ KEM G VV YN +I ++ + A+ V +M+
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMK 442
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPR 296
E G P VV+ +TV+ C + V EA V +M KG PD ITY + + +
Sbjct: 443 EKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTK 502
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
E LFD M+ G+ P TY L+ + G L+ + +M E G PD Y+ L+
Sbjct: 503 EACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLI 562
Query: 357 DALIDKGMLDMARKYDEEMF 376
+ L + A++ ++F
Sbjct: 563 NGLNKQARTREAKRLLLKLF 582
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 119/254 (46%), Gaps = 5/254 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G+ K+ E M +G+ +L SY++ ++ +C+ G+ + + EM
Sbjct: 243 YNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMN 302
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K+G +D V YNT+I+ A+ ++ EM G PSV+T ++I +C+ G +
Sbjct: 303 KRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMN 362
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLL 321
A L +M +G P+ TY + E + MI++G P + TY L+
Sbjct: 363 RATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALI 422
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G + V + M+E G +PD +Y+ ++ +D A + +M AKG+
Sbjct: 423 NGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGI- 481
Query: 382 AKPREELGTKLVQG 395
KP + L+QG
Sbjct: 482 -KPDTITYSSLIQG 494
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 3/220 (1%)
Query: 165 WEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGV 224
++EM + V ++ +Y+I + C +G A++ + M+KKG +VV YNT+I
Sbjct: 193 FKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCK 252
Query: 225 SEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
+D + R M G +P++++ N VI LC GR++E VL EM K+G D +T
Sbjct: 253 LRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVT 312
Query: 285 YHCFFR--CLEKP-REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKME 341
Y+ + C E + L + M+ G+ P + TY L+ + G + +M
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMR 372
Query: 342 ELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G P+E Y LVD KG ++ A + +EM G S
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFS 412
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 127/260 (48%), Gaps = 6/260 (2%)
Query: 140 NKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK-AVK 198
+ + +++++++ + ++ K G + + SY+ +D +S + A
Sbjct: 132 STSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAEN 191
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
++KEM + + +V YN +IR ++ +D A+R + M + GC P+VVT NT+I C
Sbjct: 192 VFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYC 251
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMD 315
+ ++ + + +L M KG P++I+Y+ C E + +EI + M + G
Sbjct: 252 KLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEV 311
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
TY L++ + + G V+ +M G SP Y +L+ ++ G ++ A ++ ++M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQM 371
Query: 376 FAKGLSAKPREELGTKLVQG 395
+GL P E T LV G
Sbjct: 372 RVRGLC--PNERTYTTLVDG 389
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/397 (20%), Positives = 156/397 (39%), Gaps = 62/397 (15%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A + RA EF + + TY +++D + + ++ ++ M DN S P
Sbjct: 356 CKAGNMNRATEFLDQMRVR-GLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFS-P 413
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ + + A + +A+ + E GL D VSY ++ C V EA +
Sbjct: 414 SVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRV- 472
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+ + G+ T Y+ +++G+ + + + ++EM + G+ D +Y+ +
Sbjct: 473 ---KRKMVAKGIKP--DTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALI 527
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV--------------------GV 224
+ C G KA++L+ EM +KG+ DVV Y+ +I + V
Sbjct: 528 NAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESV 587
Query: 225 SEGVDF------------------------------AMRVYREMREMGCQPSVVTCNTVI 254
V + A +V+ M E +P N +I
Sbjct: 588 PSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMI 647
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIR 311
C G +R+AY++ EM K G + +T + L K E+ + ++ S
Sbjct: 648 HGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCEL 707
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
+ + +L+ R G + V V +M + G P+
Sbjct: 708 SEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 170/351 (48%), Gaps = 11/351 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+++++I +L K D + MK N P++ + I+ + +++EA+ ++
Sbjct: 396 SFSALIGLLSKNGCLDQALKYFRDMK-NAGLAPDNVIYTILIGGFCRNGVMSEALKVRDE 454
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G + D V+Y +++ LC+ K + EA EL F E G + ++ G
Sbjct: 455 MLEQGCVLDVVTYNTILNGLCKEKMLSEADEL-FTEMTERGV-----FPDFYTFTTLING 508
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K K +E M +R + D+ +Y+ +D CK + K +L+ +M + I +
Sbjct: 509 YSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPN 568
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
++Y +I V A R++ EM E G + +++TCNT++K C G +A L+
Sbjct: 569 HISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLS 628
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M KG VPD ITY+ K + L ++M SG+ P + TY ++L F R G
Sbjct: 629 NMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQG 688
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++ ++ KM E G +PD Y +L++ + + L A + +EM +G
Sbjct: 689 RMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRG 739
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 165/354 (46%), Gaps = 11/354 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T N +I+ L K + + + + + M++ P+ T+ + Y L+ EA +
Sbjct: 256 TLNIMINALCKNQKIENTKSFLSDMEEK-GVFPDVVTYNTLINAYCRQGLLEEAFELMDS 314
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ GLK V +Y +++ LC+ + A+ + E +G S T YN++L
Sbjct: 315 MSGKGLKPCVFTYNAIINGLCKTGKYLRAKGV-LDEMLKIGMSP-----DTATYNILLVE 368
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ ++EM +GVV DL S+S + ++ K+G +A+K +++MK G+ D
Sbjct: 369 CCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPD 428
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V Y +I + + A++V EM E GC VVT NT++ LC+ + EA +
Sbjct: 429 NVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFT 488
Query: 272 EMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM ++G PD T+ K + + LF+ MI+ ++P + TY L+ F +
Sbjct: 489 EMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGS 548
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ V +W M P+ +Y L++ + G + A + +EM KG A
Sbjct: 549 EMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEA 602
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 153/328 (46%), Gaps = 11/328 (3%)
Query: 35 NSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLD 94
NS++ L K DL+W + + + + N T IM + + ++
Sbjct: 223 NSLLGGLVKVGWVDLAWEIYQEVVRSGVQV-NVYTLNIMINALCKNQKIENTKSFLSDME 281
Query: 95 EFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWF 153
E G+ D V+Y L++A C + EA EL ++ GL T YN I+ G
Sbjct: 282 EKGVFPDVVTYNTLINAYCRQGLLEEAFELM----DSMSGKGLKPCVFT--YNAIINGLC 335
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
K + + + +EM K G+ D +Y+I + C++ A +++ EM +G+ D+V
Sbjct: 336 KTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLV 395
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
+++ +I + + +D A++ +R+M+ G P V +I C NG + EA V EM
Sbjct: 396 SFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEM 455
Query: 274 PKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
++GCV DV+TY+ L K + E LF M E G+ P T+ L+ + + G +
Sbjct: 456 LEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNM 515
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDA 358
+++ M + PD YN L+D
Sbjct: 516 NKAVTLFEMMIQRNLKPDVVTYNTLIDG 543
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 163/384 (42%), Gaps = 62/384 (16%)
Query: 17 FFNWVETDC-HFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM--KDNPSSI--------- 64
F + + ++C +F H+ +++++I IL + + +I RM K S +
Sbjct: 117 FIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLT 176
Query: 65 -----PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIE 119
N F ++ + YV A + E CE V++
Sbjct: 177 YGNCGSNPLVFDLLVRTYVQARKLREG-------------------------CEAFRVLK 211
Query: 120 AQELCFGENK-NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
++ LC N N GLV++ GW ++W E ++E+ + GV +++
Sbjct: 212 SKGLCVSINACNSLLGGLVKV-----------GWVDLAW-----EIYQEVVRSGVQVNVY 255
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+ +I ++ +CK+ K +M++KG+ DVV YNT+I A ++ A + M
Sbjct: 256 TLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSM 315
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF-RCLEKPRE 297
G +P V T N +I LC+ G+ A VL EM K G PD TY+ C
Sbjct: 316 SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNM 375
Query: 298 ILG--LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
+ +FD M G+ P + ++ L+ + G L ++ M+ G +PD Y L
Sbjct: 376 MDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTIL 435
Query: 356 VDALIDKGMLDMARKYDEEMFAKG 379
+ G++ A K +EM +G
Sbjct: 436 IGGFCRNGVMSEALKVRDEMLEQG 459
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 138/283 (48%), Gaps = 15/283 (5%)
Query: 116 HVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVK 175
++E+ L +G N G + LV +++++R + + + E + + +G+
Sbjct: 168 EIVESLVLTYG---NCGSNPLV-------FDLLVRTYVQARKLREGCEAFRVLKSKGLCV 217
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
+++ + + + K G A ++Y+E+ + G++++V N +I A+ ++ ++
Sbjct: 218 SINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFL 277
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP 295
+M E G P VVT NT+I C G + EA+ ++ M KG P V TY+ L K
Sbjct: 278 SDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKT 337
Query: 296 REIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
+ L G+ D M++ G+ P TY +LL + R + ++ +M G PD ++
Sbjct: 338 GKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSF 397
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+AL+ L G LD A KY +M GL+ P + T L+ G
Sbjct: 398 SALIGLLSKNGCLDQALKYFRDMKNAGLA--PDNVIYTILIGG 438
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 124/284 (43%), Gaps = 11/284 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++++ L K + L M + P+ TF + Y +N+A+ F
Sbjct: 466 TYNTILNGLCKEKMLSEADELFTEMTER-GVFPDFYTFTTLINGYSKDGNMNKAVTLFEM 524
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + LK D V+Y L+D C+ + + EL N S + N Y +++ G
Sbjct: 525 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELW-----NDMISRRIYPNHIS-YGILING 578
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ M + W+EM ++G + + + + C++G KA + M KGI D
Sbjct: 579 YCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPD 638
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ YNT+I E +D A + +M G P V+T N ++ GR++EA ++
Sbjct: 639 GITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIML 698
Query: 272 EMPKKGCVPDVITYHCFFR---CLEKPREILGLFDRMIESGIRP 312
+M ++G PD TY +E + D M++ G P
Sbjct: 699 KMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 742
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 181/390 (46%), Gaps = 12/390 (3%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A+ FF W F H TYN ++++L + + IH PN +F I+
Sbjct: 102 AISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYA-IHEEMLKAGIAPNTFSFNIL 160
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVG 132
+ + ++A+ F + K ++ ++ LVD LC+ +A E+ F E +G
Sbjct: 161 IRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEV-FHEMMAMG 219
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
F V ++ ++ ++R K + RE + +M+K G D +Y+ +D + K+G
Sbjct: 220 F---VPPDRA-LHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGH 275
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
+A+K+ M K V Y ++ ++ + ++ A ++R M G +P+ V +
Sbjct: 276 AQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTS 335
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESG 309
+I ++GR++EA ++ EM + G PDVIT+ L K + F+ M+ G
Sbjct: 336 LIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG 395
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
+P + TY +++ + G + F + K M GC PD Y L+D G LD A
Sbjct: 396 CKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAA 455
Query: 370 KYDEEMFAKGLSAKPREELGTKLVQGGLDG 399
+ +E+ S+ P +L + LV+G DG
Sbjct: 456 QLLDEL--DKCSSSPNLQLYSSLVKGLCDG 483
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 150/367 (40%), Gaps = 46/367 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+ ++D L K + ++ + H M P+ A M + + A V EA F +
Sbjct: 191 TFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQ 250
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+++ G D ++Y ++D L + H EA ++ N+ V T Y +++
Sbjct: 251 MEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVL----DNMLAKACVPTEVT--YGILVNS 304
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + E + M G + Y+ + KSG+ +A L+ EM + G + D
Sbjct: 305 LCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPD 364
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V+ + +I + S + A + + EM GC+P+VVT T+I+ L + GRV A+ ++
Sbjct: 365 VITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMK 424
Query: 272 EMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLR------ 322
M GC PD +TY C F L + E L D + + P + Y L++
Sbjct: 425 GMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGG 484
Query: 323 ------------------------------KFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
+ G L ++++M GC PD Y
Sbjct: 485 SVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTY 544
Query: 353 NALVDAL 359
N L++ L
Sbjct: 545 NILINGL 551
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 145/354 (40%), Gaps = 13/354 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY ++I L K ++ ++ M + P+ T+ + + ++EA ++
Sbjct: 402 TYTTIIQGLSKIGRVANAFRIMKGMIAH-GCFPDSVTYICLLDGFCKLGRLDEAAQLLDE 460
Query: 93 LDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
LD+ + Y +LV LC+ V + F ++K E + I+ G
Sbjct: 461 LDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAA-----ENLDPGLCCSIIVG 515
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS--GKPWKAVKLYKEMKKKGIK 209
K + ++ M G D +Y+I ++ +C+S + +A L +++ G
Sbjct: 516 LCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYL 575
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
D V Y + + VD A+++ E G VV + LC G+V A ++
Sbjct: 576 PDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSL 635
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGR 326
EM ++G PD Y C L K +++ FD MI G +P + TY L++
Sbjct: 636 FQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCH 695
Query: 327 WGFLRPVFVVWKKMEELG-CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
G + F ++ M G Y+AL+ +D A K E+M ++G
Sbjct: 696 AGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRG 749
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 152/410 (37%), Gaps = 42/410 (10%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A K A E F +E C F YN++ID L K + ++ M + +P
Sbjct: 238 AKRVKEAREVFGQME-KCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAK-ACVPTE 295
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSY----------------CNLVDA 110
T+ I+ A + A F + G + + V Y C+L D
Sbjct: 296 VTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDE 355
Query: 111 LCE-------YKHVIEAQELCFGENKNVGFSGLVEMNK------TKIYNMILRGWFKMSW 157
+ E H + LC N EM + Y I++G K+
Sbjct: 356 MVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGR 415
Query: 158 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
+ M G D +Y +D CK G+ +A +L E+ K ++ Y++
Sbjct: 416 VANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSS 475
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQ---PSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
+++ + V+ + E + + P + C ++I LC+ GR+ EA + M
Sbjct: 476 LVKGLCDGGSVENTLDDLFEQSKAAAENLDPGL--CCSIIVGLCKTGRLDEACRIFQRMV 533
Query: 275 KKGCVPDVITYHCFFRCLEKPRE-----ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
+GC PD TY+ L + RE L + G P TY L + G
Sbjct: 534 SEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGE 593
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ + ++ G + D AY AL L +G +D A +EM +G
Sbjct: 594 VDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQG 643
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 128/299 (42%), Gaps = 22/299 (7%)
Query: 83 VNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYK-HVIEAQELCFGENKNVGFSGLVEMN 140
++EA F ++ G K D +Y L++ LC + + +E + + VG+ +
Sbjct: 522 LDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGY-----LP 576
Query: 141 KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
Y + G K+ + + EE RG D+ +Y+ +C G+ +AV L+
Sbjct: 577 DAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLF 636
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
+EM ++G D AY +I + + ++ A + + EM G +P+V T +++ LC
Sbjct: 637 QEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHA 696
Query: 261 GRVREAYAVLAEMPKKG-CVPDVITY----HCFFRCLEKPREILGLFDRMIESGIRPKMD 315
G V EA+ M +G V V+ Y H F + L K L LF+ MI G P
Sbjct: 697 GNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKAL-KVDAALKLFEDMISRGNVPTAV 755
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
T L R G + ++M G P + A++D L RK DE
Sbjct: 756 TSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGL---------RKSDES 805
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 74/179 (41%), Gaps = 15/179 (8%)
Query: 46 EFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SY 104
+ D + +L M + P+ A + + + + +A F+++ G K V +Y
Sbjct: 628 QVDRAVSLFQEMVRQGGA-PDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATY 686
Query: 105 CNLVDALCEYKHVIEAQELCFGENKNVGFSGLVE----MNKTKIYNMILRGWFKMSWWGK 160
LV ALC +V EA F G++ + IY+ ++ G+ K
Sbjct: 687 TALVQALCHAGNVDEAFHR---------FEGMLARGELVGSVMIYDALIHGFCKALKVDA 737
Query: 161 CREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+ +E+M RG V + + D + +SGK KA +L +EM G + ++
Sbjct: 738 ALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAIL 796
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 177/430 (41%), Gaps = 82/430 (19%)
Query: 15 LEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
++FF W ++ H T TY ++I L ++ W +I M NP + +
Sbjct: 74 MQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVV 133
Query: 75 KRYVTAHLVNEAMGTF-----------------------------------NKLDEFG-- 97
+ A +V +A+ F N++ G
Sbjct: 134 RMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHC 193
Query: 98 LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSW 157
D V+Y L+ A C+ A +L E K +G TKIY M++ +FK +
Sbjct: 194 FPDTVTYSALISAFCKLGRRDSAIQL-LNEMKEIGMQP-----TTKIYTMLIALFFKFND 247
Query: 158 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
+EEM + D+ +Y+ + + K+G+ +A + EM+++G + D V N
Sbjct: 248 AHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNN 307
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLL-------------------- 257
+I +G + +D AM++++EM + C PSVVT NT+IK L
Sbjct: 308 MINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKES 367
Query: 258 ----------------CENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE---I 298
C+ R+ +A +L EM +KG P Y L K +
Sbjct: 368 GISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLA 427
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
LF + E+ Y ++++ G+ G L ++ +M +LGC+PD +AYNAL+
Sbjct: 428 CELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSG 487
Query: 359 LIDKGMLDMA 368
L GMLD A
Sbjct: 488 LARTGMLDEA 497
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 179/408 (43%), Gaps = 35/408 (8%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+ +++ + +N + T+ H T TY+++I K D + L++ MK+ P
Sbjct: 173 HEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQ-PT 231
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKL-DEFGLKDEVSYCNLVDALCEYKHVIEA----- 120
+ ++ + + + A+ F ++ ++ D +Y L+ L + + EA
Sbjct: 232 TKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFC 291
Query: 121 ---QELCFGE----NKNVGFSG-----------LVEMNKTK------IYNMILRGWFKM- 155
+E C + N + F G EM + YN I++ F+
Sbjct: 292 EMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESK 351
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
S + ++E M + G+ +YSI +D CK+ + KA+ L +EM +KG AY
Sbjct: 352 SRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAY 411
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
++I A+G ++ D A +++E++E S +IK L + GR+ +A + EM K
Sbjct: 412 CSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNK 471
Query: 276 KGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
GC PDV Y+ L + E L RM E G P +++Y ++L + G
Sbjct: 472 LGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHR 531
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ M++ PD +YN ++ AL GM + A K +EM G
Sbjct: 532 AMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGF 579
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 149/331 (45%), Gaps = 10/331 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +I LGK D +++ M+ P+ M A +++AM F +
Sbjct: 269 TYTELIRGLGKAGRIDEAYHFFCEMQREGCR-PDTVFMNNMINFLGKAGRLDDAMKLFQE 327
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
++ + V+Y ++ AL E K F K G S + Y++++ G
Sbjct: 328 METLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP-----SSFTYSILIDG 382
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K + K EEMD++G +Y +D + K+ + A +L++E+K+
Sbjct: 383 FCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSS 442
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
Y +I+ +G + +D A+ ++ EM ++GC P V N ++ L G + EA + +
Sbjct: 443 ARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMR 502
Query: 272 EMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M + GC+PD+ +Y+ L K P + + M +S +RP + +Y +L G
Sbjct: 503 RMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAG 562
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ K+M LG D Y+++++A+
Sbjct: 563 MFEEASKLMKEMNTLGFEYDLITYSSILEAI 593
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 135/288 (46%), Gaps = 20/288 (6%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDL------SWNLIHRMKDNPSSIPNH 67
A++ F +ET + TYN++I L FE SW RMK++ S P+
Sbjct: 321 AMKLFQEMET-LRCIPSVVTYNTIIKAL---FESKSRASEVPSW--FERMKESGIS-PSS 373
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKD-EVSYCNLVDALCEYKHVIEAQELCFG 126
T+ I+ + + + +AM ++DE G +YC+L+DAL + K A EL
Sbjct: 374 FTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQE 433
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
+N G S ++Y ++++ K ++EM+K G D+++Y+ M
Sbjct: 434 LKENCGSSS------ARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSG 487
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+ ++G +A+ + M++ G D+ +YN ++ + + G AM + M++ +P
Sbjct: 488 LARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPD 547
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
VV+ NTV+ L G EA ++ EM G D+ITY + K
Sbjct: 548 VVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGK 595
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 14/213 (6%)
Query: 178 HSYSIYM------DIMCKSGKPWKAVKLYKEMKKKGI-KMDVVAYNTVIRAVGVSEGVDF 230
H S YM +++ + G+ WK ++ EM + I + + V+R +G ++ V
Sbjct: 88 HDTSTYMALIHCLEVVEQYGEMWKMIQ---EMVRNPICVVTPTELSDVVRMLGNAKMVRQ 144
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG-CVPDVITYHCFF 289
A+ ++ +++ CQP N++I +L G+ + + + EM +G C PD +TY
Sbjct: 145 AITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALI 204
Query: 290 RC---LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
L + + L + M E G++P Y ML+ F ++ ++++M C
Sbjct: 205 SAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCR 264
Query: 347 PDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
PD F Y L+ L G +D A + EM +G
Sbjct: 265 PDVFTYTELIRGLGKAGRIDEAYHFFCEMQREG 297
>gi|222622668|gb|EEE56800.1| hypothetical protein OsJ_06387 [Oryza sativa Japonica Group]
Length = 540
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 170/376 (45%), Gaps = 19/376 (5%)
Query: 15 LEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
++FF+W + + DT N VI LG+ F + M+ N S P+ +T I+
Sbjct: 124 VDFFDWAIANSKLPPSVDTCNIVIRALGRRKFFAFFEPALEIMRKNGVS-PDISTLEIII 182
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGL-------KDEVSYCNLVDALCEYKHVIEAQELCFGE 127
+ A VN A+ N D FGL + E+ + L++ LC HV A L
Sbjct: 183 DSLIAARHVNTAIQLINT-DHFGLGVWQTCQRKEI-FTVLINCLCRRSHVGLASSLLQAS 240
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
++++ +YN ++ GW + K FWE M + G+V D SY ++ +
Sbjct: 241 RGET-----IDLDN-HMYNEVIGGWARFGRVDKVEHFWETMLEDGLVPDQVSYCHLIEAL 294
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
++ + +A++++++M +G +AYN +I D ++ Y++M + C P++
Sbjct: 295 GRANRAEEALQVFEKMVHEGYCPTTMAYNALIFNFISVGNFDRCIKYYKDMLDNNCPPNI 354
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDR 304
T +I+ +V +A + EM +G +P F L P L ++ R
Sbjct: 355 DTYRKMIRAFLRERKVADALQMFDEMLSRGILPSTGMITLFIEPLCTFGPPHAALLIYKR 414
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
++G R M Y +LL + +G V +W++M+E G D+ Y +V+ L + G
Sbjct: 415 SRKAGCRISMKAYKLLLERLAMFGKSGTVLQIWEEMQESGHPSDKEIYEFIVNGLCNVGK 474
Query: 365 LDMARKYDEEMFAKGL 380
+D A EE KG
Sbjct: 475 VDAAVSVVEESIRKGF 490
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 105/248 (42%), Gaps = 46/248 (18%)
Query: 81 HLVNEAMG---TFNKLD----------EFGL-KDEVSYCNLVDALCEYKHVIEAQELCFG 126
H+ NE +G F ++D E GL D+VSYC+L++AL EA ++ F
Sbjct: 250 HMYNEVIGGWARFGRVDKVEHFWETMLEDGLVPDQVSYCHLIEALGRANRAEEALQV-FE 308
Query: 127 ENKNVGFSGLVEMNKTKIYNMI------------------------------LRGWFKMS 156
+ + G+ I+N I +R + +
Sbjct: 309 KMVHEGYCPTTMAYNALIFNFISVGNFDRCIKYYKDMLDNNCPPNIDTYRKMIRAFLRER 368
Query: 157 WWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
+ ++EM RG++ +++++ +C G P A+ +YK +K G ++ + AY
Sbjct: 369 KVADALQMFDEMLSRGILPSTGMITLFIEPLCTFGPPHAALLIYKRSRKAGCRISMKAYK 428
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
++ + + ++++ EM+E G ++ LC G+V A +V+ E +K
Sbjct: 429 LLLERLAMFGKSGTVLQIWEEMQESGHPSDKEIYEFIVNGLCNVGKVDAAVSVVEESIRK 488
Query: 277 G-CVPDVI 283
G C+ V+
Sbjct: 489 GFCLGRVV 496
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 100/236 (42%), Gaps = 13/236 (5%)
Query: 8 ANDWKRALEFFNWVETDCH--FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
AN + AL+ F E H + TT YN++I FD M DN + P
Sbjct: 297 ANRAEEALQVF---EKMVHEGYCPTTMAYNALIFNFISVGNFDRCIKYYKDMLDN-NCPP 352
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNL-VDALCEYKHVIEAQELC 124
N T+R M + ++ V +A+ F+++ G+ L ++ LC + A L
Sbjct: 353 NIDTYRKMIRAFLRERKVADALQMFDEMLSRGILPSTGMITLFIEPLCTFGPP-HAALLI 411
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+ ++ G + M K Y ++L G + WEEM + G D Y +
Sbjct: 412 YKRSRKAGCR--ISM---KAYKLLLERLAMFGKSGTVLQIWEEMQESGHPSDKEIYEFIV 466
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ +C GK AV + +E +KG + V Y + + V+ A +++++R+
Sbjct: 467 NGLCNVGKVDAAVSVVEESIRKGFCLGRVVYGKLNNKLLEMNKVETAYNLFKKVRD 522
>gi|218190552|gb|EEC72979.1| hypothetical protein OsI_06882 [Oryza sativa Indica Group]
Length = 541
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 170/376 (45%), Gaps = 19/376 (5%)
Query: 15 LEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
++FF+W + + DT N VI LG+ F + M+ N S P+ +T I+
Sbjct: 125 VDFFDWAIANSKLPPSVDTCNIVIRALGRRKFFAFFEPALEIMRKNGVS-PDISTLEIII 183
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGL-------KDEVSYCNLVDALCEYKHVIEAQELCFGE 127
+ A VN A+ N D FGL + E+ + L++ LC HV A L
Sbjct: 184 DSLIAARHVNTAIQLINT-DHFGLGVWQTCQRKEI-FTVLINCLCRRSHVGLASSLLQAS 241
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
++++ +YN ++ GW + K FWE M + G+V D SY ++ +
Sbjct: 242 RGET-----IDLDN-HMYNEVIGGWARFGRVDKVEHFWETMLEDGLVPDQVSYCHLIEAL 295
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
++ + +A++++++M +G +AYN +I D ++ Y++M + C P++
Sbjct: 296 GRANRAEEALQVFEKMVHEGYCPTTMAYNALIFNFISVGNFDRCIKYYKDMLDNNCPPNI 355
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDR 304
T +I+ +V +A + EM +G +P F L P L ++ R
Sbjct: 356 DTYRKMIRAFLRERKVADALQMFDEMLSRGILPSTGMITLFIEPLCTFGPPHAALLIYKR 415
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
++G R M Y +LL + +G V +W++M+E G D+ Y +V+ L + G
Sbjct: 416 SRKAGCRISMKAYKLLLERLAMFGKSGTVLQIWEEMQESGHPSDKEIYEFIVNGLCNVGK 475
Query: 365 LDMARKYDEEMFAKGL 380
+D A EE KG
Sbjct: 476 VDAAVSVVEESIRKGF 491
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 105/248 (42%), Gaps = 46/248 (18%)
Query: 81 HLVNEAMG---TFNKLD----------EFGL-KDEVSYCNLVDALCEYKHVIEAQELCFG 126
H+ NE +G F ++D E GL D+VSYC+L++AL EA ++ F
Sbjct: 251 HMYNEVIGGWARFGRVDKVEHFWETMLEDGLVPDQVSYCHLIEALGRANRAEEALQV-FE 309
Query: 127 ENKNVGFSGLVEMNKTKIYNMI------------------------------LRGWFKMS 156
+ + G+ I+N I +R + +
Sbjct: 310 KMVHEGYCPTTMAYNALIFNFISVGNFDRCIKYYKDMLDNNCPPNIDTYRKMIRAFLRER 369
Query: 157 WWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
+ ++EM RG++ +++++ +C G P A+ +YK +K G ++ + AY
Sbjct: 370 KVADALQMFDEMLSRGILPSTGMITLFIEPLCTFGPPHAALLIYKRSRKAGCRISMKAYK 429
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
++ + + ++++ EM+E G ++ LC G+V A +V+ E +K
Sbjct: 430 LLLERLAMFGKSGTVLQIWEEMQESGHPSDKEIYEFIVNGLCNVGKVDAAVSVVEESIRK 489
Query: 277 G-CVPDVI 283
G C+ V+
Sbjct: 490 GFCLGRVV 497
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 100/236 (42%), Gaps = 13/236 (5%)
Query: 8 ANDWKRALEFFNWVETDCH--FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
AN + AL+ F E H + TT YN++I FD M DN + P
Sbjct: 298 ANRAEEALQVF---EKMVHEGYCPTTMAYNALIFNFISVGNFDRCIKYYKDMLDN-NCPP 353
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNL-VDALCEYKHVIEAQELC 124
N T+R M + ++ V +A+ F+++ G+ L ++ LC + A L
Sbjct: 354 NIDTYRKMIRAFLRERKVADALQMFDEMLSRGILPSTGMITLFIEPLCTFGPP-HAALLI 412
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+ ++ G + M K Y ++L G + WEEM + G D Y +
Sbjct: 413 YKRSRKAGCR--ISM---KAYKLLLERLAMFGKSGTVLQIWEEMQESGHPSDKEIYEFIV 467
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ +C GK AV + +E +KG + V Y + + V+ A +++++R+
Sbjct: 468 NGLCNVGKVDAAVSVVEESIRKGFCLGRVVYGKLNNKLLEMNKVETAYNLFKKVRD 523
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 180/390 (46%), Gaps = 12/390 (3%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A+ FF W F H TYN ++++L + + IH PN +F I+
Sbjct: 102 AISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYA-IHEEMLKAGIAPNTFSFNIL 160
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVG 132
+ + ++A+ F + K ++ ++ LVD LC+ +A E+ F E +G
Sbjct: 161 IRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEV-FHEMMAMG 219
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
F V ++ ++ ++R K + RE + +M+K G D +Y+ +D + K+G
Sbjct: 220 F---VPPDRA-LHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGH 275
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
+A+K+ M K V Y ++ ++ + ++ A ++R M G +P+ V +
Sbjct: 276 AQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTS 335
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESG 309
+I ++GR++EA ++ EM + G PDVIT+ L K + F+ M+ G
Sbjct: 336 LIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG 395
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
+P + TY +++ + G + F + K M GC PD Y L+D G LD A
Sbjct: 396 CKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAA 455
Query: 370 KYDEEMFAKGLSAKPREELGTKLVQGGLDG 399
+ +E+ S+ P +L + LV G DG
Sbjct: 456 QLLDEL--DKCSSSPNLQLYSSLVNGLCDG 483
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 149/367 (40%), Gaps = 46/367 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+ ++D L K + ++ + H M P+ A M + + A V EA F +
Sbjct: 191 TFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQ 250
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+++ G D ++Y ++D L + H EA ++ N+ V T Y +++
Sbjct: 251 MEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVL----DNMLAKACVPTEVT--YGILVNS 304
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + E + M G + Y+ + KSG+ +A L+ EM + G + D
Sbjct: 305 LCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPD 364
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V+ + +I + S + A + + EM GC+P+VVT T+I+ L + GRV A+ ++
Sbjct: 365 VITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMK 424
Query: 272 EMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLR------ 322
M GC PD +TY C F L + E L D + + P + Y L+
Sbjct: 425 GMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGG 484
Query: 323 ------------------------------KFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
+ G L ++++M GC PD Y
Sbjct: 485 SVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTY 544
Query: 353 NALVDAL 359
N L++ L
Sbjct: 545 NILINGL 551
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 167/397 (42%), Gaps = 17/397 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A +RA E F V F + Y S+I K + +L M + P
Sbjct: 306 CKAGTLERAEELFR-VMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVE-AGYRP 363
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
+ T +M + +A +F ++ G K + V+Y ++ L + V A +
Sbjct: 364 DVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIM 423
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
G + F V Y +L G+ K+ + + +E+DK +L YS +
Sbjct: 424 KGMIAHGCFPDSV------TYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLV 477
Query: 185 DIMCKSGKPWKAVK-LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ +C G K + L+++ K +D ++I + + +D A R+++ M GC
Sbjct: 478 NGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGC 537
Query: 244 QPSVVTCNTVIKLLCEN--GRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI--- 298
+P T N +I LC + RV A+A+L ++ K G +PD +TY L K E+
Sbjct: 538 KPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRA 597
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+ + + G + Y L G + ++++M G +PD AY +++
Sbjct: 598 VKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIING 657
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
LI L+ A K+ +EM KG KP T LVQ
Sbjct: 658 LIKVKKLEDACKFFDEMIGKG--QKPTVATYTALVQA 692
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 148/354 (41%), Gaps = 13/354 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY ++I L K ++ ++ M + P+ T+ + + ++EA ++
Sbjct: 402 TYTTIIQGLSKIGRVANAFRIMKGMIAH-GCFPDSVTYICLLDGFCKLGRLDEAAQLLDE 460
Query: 93 LDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
LD+ + Y +LV+ LC+ V + + F ++K E + I+ G
Sbjct: 461 LDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAA-----ETLDPGLCCSIIVG 515
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS--GKPWKAVKLYKEMKKKGIK 209
K + ++ M G D +Y+I ++ +C+S + +A L +++K G
Sbjct: 516 LCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYL 575
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
D V Y + + VD A+++ E G VV + LC G+V A ++
Sbjct: 576 PDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSL 635
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGR 326
EM ++G PD Y C L K +++ FD MI G +P + TY L++
Sbjct: 636 FQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCH 695
Query: 327 WGFLRPVFVVWKKMEELG-CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
G + F ++ M G Y+AL+ +D A K E+M ++G
Sbjct: 696 AGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRG 749
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 128/299 (42%), Gaps = 22/299 (7%)
Query: 83 VNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYK-HVIEAQELCFGENKNVGFSGLVEMN 140
++EA F ++ G K D +Y L++ LC + + +E + + VG+ +
Sbjct: 522 LDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGY-----LP 576
Query: 141 KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
Y + G K+ + + EE RG D+ +Y+ +C G+ +AV L+
Sbjct: 577 DAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLF 636
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
+EM ++G D AY +I + + ++ A + + EM G +P+V T +++ LC
Sbjct: 637 QEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHA 696
Query: 261 GRVREAYAVLAEMPKKG-CVPDVITY----HCFFRCLEKPREILGLFDRMIESGIRPKMD 315
G V EA+ M +G V V+ Y H F + L K L LF+ MI G P
Sbjct: 697 GNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKAL-KVDAALKLFEDMISRGNVPTAV 755
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
T L R G + ++M G P + A++D L RK DE
Sbjct: 756 TSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGL---------RKSDES 805
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 6/156 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
P+ A + + + + +A F+++ G K V +Y LV ALC +V EA
Sbjct: 646 PDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEA--- 702
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F +++ G + + IY+ ++ G+ K + +E+M RG V + +
Sbjct: 703 -FHRFESMLARGEL-VGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASL 760
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
D + +SGK KA +L +EM G + ++
Sbjct: 761 FDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAIL 796
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 164/382 (42%), Gaps = 39/382 (10%)
Query: 51 WNLIHRMKDNPS-SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LV 108
+N I R + P ++P T+ I+ AH F + + GLK +V N L+
Sbjct: 102 FNRICREEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILL 161
Query: 109 DALCEYKHVIEAQELCFGENKNVG-----------FSGLVEMNKTK-------------- 143
LC K +A + +G L E ++++
Sbjct: 162 KCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSG 221
Query: 144 -------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKA 196
YN ++ G+F+ K + EM ++GVV D+ +YS Y+D +CK+ KA
Sbjct: 222 GCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKA 281
Query: 197 VKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKL 256
+ ++M G + D V YN +I + ++REM G P + TCN+ +
Sbjct: 282 ELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSS 341
Query: 257 LCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPK 313
LC++G+ +EA M KG PD++TY ++L LF+ M +GI
Sbjct: 342 LCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVAD 401
Query: 314 MDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDE 373
Y +L+ +G+ G + +++ +M+E G PD + Y ++ A G L A
Sbjct: 402 HSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFN 461
Query: 374 EMFAKGLSAKPREELGTKLVQG 395
+M A GL KP + L+QG
Sbjct: 462 QMIAMGL--KPDTIVYNSLIQG 481
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 177/426 (41%), Gaps = 82/426 (19%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T +Y++V+ L + + +L+H M K + PN ++ + + V++A
Sbjct: 190 TISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNL 249
Query: 90 FNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
F+++ + G+ D V+Y + +DALC+ + ++ EL + + GF E +K YN +
Sbjct: 250 FHEMMQQGVVPDVVTYSSYIDALCKAR-AMDKAELVLRQMISNGF----EPDKVT-YNCM 303
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G+ + W + + EM +RG++ D+ + + YM +CK GK +A + + M KG
Sbjct: 304 IHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGH 363
Query: 209 KMDVVA-----------------------------------YNTVIRAVGVSEGVDFAMR 233
K D+V YN +I A G +D AM
Sbjct: 364 KPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAML 423
Query: 234 VYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------C 287
++ +M+E G P T TVI GR+ +A +M G PD I Y+ C
Sbjct: 424 IFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFC 483
Query: 288 FFRCLEKPREILG---------------------------------LFDRMIESGIRPKM 314
L K +E++ +FD +I G RP +
Sbjct: 484 MHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDV 543
Query: 315 DTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
T+ L+ +G G + F V M +G PD Y+AL+D G +D E
Sbjct: 544 ITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFRE 603
Query: 375 MFAKGL 380
M +KG+
Sbjct: 604 MLSKGV 609
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 168/401 (41%), Gaps = 36/401 (8%)
Query: 15 LEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
L FN +E + YN +ID GK D + + +M++ +P+ T+ +
Sbjct: 387 LNLFNSMEGN-GIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQER-GVMPDAWTYGTVI 444
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC-------FG 126
+ + +AM FN++ GLK D + Y +L+ C + ++++A+EL
Sbjct: 445 AAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIP 504
Query: 127 ENKNVGFSGLV-----------------------EMNKTKIYNMILRGWFKMSWWGKCRE 163
V F+ ++ E +N ++ G+ + K
Sbjct: 505 RPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFG 564
Query: 164 FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
+ M G+ D+ +YS +D C++G+ + L++EM KG+K + Y ++ +
Sbjct: 565 VLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLF 624
Query: 224 VSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVI 283
A ++ EM E G + TC ++ LC N EA A+ ++ ++
Sbjct: 625 NDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIA 684
Query: 284 TYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
+ + K R E LFD + +G+ P TY +++ + G + ++ M
Sbjct: 685 IINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLM 744
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
E+ GC+P N ++ L++KG + A Y ++ K +S
Sbjct: 745 EKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTIS 785
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 167/392 (42%), Gaps = 37/392 (9%)
Query: 6 CYANDWKRALEFFNWVETDCH---------FTHTTDTYNSVIDILGKFFEFDLSWNLIHR 56
C K A EFF+ + H H V+D+L NL +
Sbjct: 343 CKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDML----------NLFNS 392
Query: 57 MKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYK 115
M+ N + +H+ + I+ Y +++EAM F ++ E G + D +Y ++ A
Sbjct: 393 MEGN-GIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMG 451
Query: 116 HVIEAQELCFGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRG 172
+ +A + F+ ++ M T +YN +++G+ K +E EM RG
Sbjct: 452 RLADAMD---------KFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRG 502
Query: 173 VVK-DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFA 231
+ + + ++ ++ +CK G+ +A ++ + G + DV+ +N++I G+ ++ A
Sbjct: 503 IPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKA 562
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC 291
V M +G +P VVT + ++ C NGR+ + + EM KG P ITY
Sbjct: 563 FGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHG 622
Query: 292 LEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
L +G + MIESG + T ++L R ++KK+ + +
Sbjct: 623 LFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFN 682
Query: 349 EFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
N ++DA+ + A + + + A GL
Sbjct: 683 IAIINTMIDAMYKVRKREEANELFDSISATGL 714
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 171/369 (46%), Gaps = 17/369 (4%)
Query: 33 TYNSVID-ILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
TYN +I +L + F + + L+ M +N +P T+ + A F+
Sbjct: 302 TYNPLITGLLARDF-VEKAGALLLEM-ENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFD 359
Query: 92 KLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELC-FGENKNVGFSGLVEMNKTKIYNMIL 149
++ GL D ++Y +L++ C+ ++ Q LC FG+ K G V YN+++
Sbjct: 360 EMRAKGLLPDLITYNSLINGYCKAGNL--KQALCLFGDLKRAGLGPTV-----LTYNILI 412
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G+ ++ R EEM + + D+ +Y+I M+ C + EM KG++
Sbjct: 413 DGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLE 472
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
D AYNT I A + A ++ EM G VT N +I LC+ G +++AY +
Sbjct: 473 PDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVL 532
Query: 270 LAEMPKKGCVPDVITYHCFFRC-LEKPR--EILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
+M G D +TY C E+ R E +FD M+ SG+ P + TY + + + R
Sbjct: 533 WMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCR 592
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPRE 386
G L + ++KM E G P+E YN L+ AL G + A ++ EM +GL P +
Sbjct: 593 RGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLV--PNK 650
Query: 387 ELGTKLVQG 395
T L+ G
Sbjct: 651 YTYTLLIDG 659
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 141/325 (43%), Gaps = 19/325 (5%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG---LKDEVSYCNLVDALCEYKHVIEAQ 121
P+ T+ + + A +++A+ ++ L ++V+Y +++ L + +A
Sbjct: 227 PSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAA 286
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
+L V L + YN ++ G + K EM+ G+V + +Y+
Sbjct: 287 QL-------VDIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYN 339
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+D + K+G A + EM+ KG+ D++ YN++I + + A+ ++ +++
Sbjct: 340 TLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRA 399
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------HCFFRCLEKP 295
G P+V+T N +I C G + A + EM ++ C+PDV TY C R L
Sbjct: 400 GLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMV 459
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
R FD M+ G+ P Y + G + F + ++M G S D YN L
Sbjct: 460 RI---FFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVL 516
Query: 356 VDALIDKGMLDMARKYDEEMFAKGL 380
+D L G L A +M GL
Sbjct: 517 IDGLCKTGSLKDAYVLWMKMVTDGL 541
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 111/235 (47%), Gaps = 6/235 (2%)
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N +LR + W R + +M + GV + +Y+ +D CK+G+ +AV L K+M+
Sbjct: 198 NCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEA 257
Query: 206 K--GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
+ G + V YN VI + ++ A ++ MR + + S T N +I L V
Sbjct: 258 RAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMR-LSKKASAFTYNPLITGLLARDFV 316
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGL---FDRMIESGIRPKMDTYVML 320
+A A+L EM +G VP V+TY+ L K FD M G+ P + TY L
Sbjct: 317 EKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSL 376
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
+ + + G L+ ++ ++ G P YN L+D G L+ AR+ EEM
Sbjct: 377 INGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEM 431
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 93/191 (48%), Gaps = 6/191 (3%)
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
+ + ++EM + G+ V N V+R + + D VY +M ++G +PS+ T NT++
Sbjct: 177 QCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLL 236
Query: 255 KLLCENGRVREAYAVLAEMPKK--GCVPDVITYHCFFRCLEKPREI---LGLFDRMIESG 309
C+ GR+ +A A+L +M + GC+P+ +TY+ L + E+ L D M S
Sbjct: 237 DSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSK 296
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
+ TY L+ F+ + +ME G P YN L+D L G + A+
Sbjct: 297 -KASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQ 355
Query: 370 KYDEEMFAKGL 380
+EM AKGL
Sbjct: 356 VKFDEMRAKGL 366
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 132/323 (40%), Gaps = 10/323 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A + K+AL F ++ T TYN +ID + + + + L M + +P
Sbjct: 381 CKAGNLKQALCLFGDLKR-AGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEE-DCLP 438
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCF 125
+ T+ I+ + F+++ GL+ + C + + I A F
Sbjct: 439 DVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPD---CFAYNTRISAELTIGAITNAF 495
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
+ + G+ + T YN+++ G K W +M G+ D +Y+ +
Sbjct: 496 QLREEMMLRGIS--SDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIH 553
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
C+ G+ +A ++ M G+ VV Y I + A +R+M E G +P
Sbjct: 554 AHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEP 613
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF--RCLEKP-REILGLF 302
+ VT N ++ LC GR AY EM ++G VP+ TY C E + L+
Sbjct: 614 NEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLY 673
Query: 303 DRMIESGIRPKMDTYVMLLRKFG 325
M + GI P T+ L + FG
Sbjct: 674 CEMHQKGIHPDHCTHNALFKGFG 696
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 17/139 (12%)
Query: 260 NGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRP---KMDT 316
N +R + AE + VP + C L F M G+ P + +
Sbjct: 151 NSLLRMSTKFSAECQAQKSVPASCSTQC-----------LSAFQEMARHGVAPFVKECNC 199
Query: 317 YVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
+ +LR RW +R V+ M +LG P F YN L+D+ G +D A ++M
Sbjct: 200 VLRVLRDAARWDDMR---AVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDME 256
Query: 377 AKGLSAKPREELGTKLVQG 395
A+ P + ++ G
Sbjct: 257 ARAAGCLPNDVTYNVVING 275
>gi|357436823|ref|XP_003588687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477735|gb|AES58938.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 587
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 178/387 (45%), Gaps = 18/387 (4%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLI----HRMKDNPS 62
+A+ K + W F + ++SVI+ L K EFD +W+L+ R D+
Sbjct: 114 FASSPKLLHSLYLWALNQPGFKPDSSLFDSVINALAKMKEFDDAWSLVLDRIRRDDDDDE 173
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFN-KLDEFGLKDEVSYCNL----VDALCEYKHV 117
+ + TF I+ +RY A + A+ TF D+ + D VS +L +D+LC+
Sbjct: 174 KLVSVGTFAIIIRRYARAGMHKAAIRTFEFAKDKKSIVDSVSEMSLFEILIDSLCKEGSA 233
Query: 118 IEAQE-LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
EA E L + ++G+ + ++YN++L GWF+ WEEM V
Sbjct: 234 REASEYLLRRKETDLGW-----VPSIRVYNIMLNGWFRARKLKHAERLWEEMKNENVRPS 288
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
+ +Y ++ C+ + KA+++ EM K+GIK + + YN +I A+ + A+ +
Sbjct: 289 VVTYGTLVEGYCRMRRVEKALEMVGEMTKEGIKPNAIVYNPIIDALAEAGRFKEALGMME 348
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE--- 293
+ P++ T N+++K C+ G + A +L +M +G +P TY+ FFR
Sbjct: 349 RFHVLQIGPTLSTYNSLVKGFCKAGDIEGASKILKKMISRGFLPIPTTYNYFFRYFSRCG 408
Query: 294 KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
K E + L+ +MIESG P TY ++L+ L V +M G D
Sbjct: 409 KVDEGMNLYTKMIESGHNPDRLTYHLVLKMLCEEEKLELAVQVSMEMRHKGYDMDLATST 468
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGL 380
L L L+ A E+M +G+
Sbjct: 469 MLTHLLCKMHKLEEAFAEFEDMIRRGI 495
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 126/267 (47%), Gaps = 10/267 (3%)
Query: 22 ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAH 81
ETD + + YN +++ + + + L MK N + P+ T+ + + Y
Sbjct: 245 ETDLGWVPSIRVYNIMLNGWFRARKLKHAERLWEEMK-NENVRPSVVTYGTLVEGYCRMR 303
Query: 82 LVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN 140
V +A+ ++ + G+K + + Y ++DAL E EA L E +V +++
Sbjct: 304 RVEKALEMVGEMTKEGIKPNAIVYNPIIDALAEAGRFKEA--LGMMERFHV-----LQIG 356
Query: 141 KT-KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKL 199
T YN +++G+ K + ++M RG + +Y+ + + GK + + L
Sbjct: 357 PTLSTYNSLVKGFCKAGDIEGASKILKKMISRGFLPIPTTYNYFFRYFSRCGKVDEGMNL 416
Query: 200 YKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCE 259
Y +M + G D + Y+ V++ + E ++ A++V EMR G + T + LLC+
Sbjct: 417 YTKMIESGHNPDRLTYHLVLKMLCEEEKLELAVQVSMEMRHKGYDMDLATSTMLTHLLCK 476
Query: 260 NGRVREAYAVLAEMPKKGCVPDVITYH 286
++ EA+A +M ++G +P +T+
Sbjct: 477 MHKLEEAFAEFEDMIRRGIIPQYLTFQ 503
>gi|224085974|ref|XP_002307761.1| predicted protein [Populus trichocarpa]
gi|222857210|gb|EEE94757.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 161/369 (43%), Gaps = 13/369 (3%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKR 76
FFNW + D+YN VI LG+ D +H ++ S+ N TF I+
Sbjct: 153 FFNWAIKQPMISKDVDSYNVVIRALGRRKFIDFMVKFLHELRVEGVSM-NSETFSIVIDS 211
Query: 77 YVTAHLVNEAMGTFNKLDE-FGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFS 134
V A V +A+ F L+E FG + + N L+ LC HV A + F+
Sbjct: 212 LVRARRVYKAIQMFGNLEEEFGFERDAESLNVLLQCLCRRSHVGAANSYFNSVKGKIPFN 271
Query: 135 GLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPW 194
+ YN+I+ GW K + + +EEM++ G D S+S ++ + ++GK
Sbjct: 272 CMT-------YNVIIGGWSKFGRVSEMQRVFEEMEEDGFSPDCLSFSYLLEGLGRAGKIE 324
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
AV ++ M++KG D YN +I D M+ YR + C P++ T +I
Sbjct: 325 DAVMIFGSMEEKGCVPDTNVYNAMISNFISVGNFDECMKYYRCLLSKNCDPNIDTYTRMI 384
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIR 311
L + +V +A + EM +G V T F L P + ++ + + G +
Sbjct: 385 SGLIKASKVADALEMFDEMLDRGMVTKTGTVTSFIEPLCSFGPPHAAMVIYTKARKVGCK 444
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
+ Y +LL + R+G + +W +M+E G S D Y L+ L + G + A
Sbjct: 445 ISLSAYKLLLMRLSRFGKCGMMLKIWDEMQESGYSSDMEVYEYLISGLCNIGQFENAVLV 504
Query: 372 DEEMFAKGL 380
EE KG
Sbjct: 505 MEESMRKGF 513
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 107/228 (46%), Gaps = 9/228 (3%)
Query: 173 VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM 232
+ KD+ SY++ + + + VK E++ +G+ M+ ++ VI ++ + V A+
Sbjct: 163 ISKDVDSYNVVIRALGRRKFIDFMVKFLHELRVEGVSMNSETFSIVIDSLVRARRVYKAI 222
Query: 233 RVYREMRE-MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVP-DVITYHCFFR 290
+++ + E G + + N +++ LC V A + + KG +P + +TY+
Sbjct: 223 QMFGNLEEEFGFERDAESLNVLLQCLCRRSHVGAANSYFNSV--KGKIPFNCMTYNVIIG 280
Query: 291 CLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
K E+ +F+ M E G P ++ LL GR G + +++ MEE GC P
Sbjct: 281 GWSKFGRVSEMQRVFEEMEEDGFSPDCLSFSYLLEGLGRAGKIEDAVMIFGSMEEKGCVP 340
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
D YNA++ I G D KY + +K + P + T+++ G
Sbjct: 341 DTNVYNAMISNFISVGNFDECMKYYRCLLSK--NCDPNIDTYTRMISG 386
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 111/244 (45%), Gaps = 7/244 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN+++R + + +F E+ GV + ++SI +D + ++ + +KA++++ ++
Sbjct: 170 YNVVIRALGRRKFIDFMVKFLHELRVEGVSMNSETFSIVIDSLVRARRVYKAIQMFGNLE 229
Query: 205 KK-GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP-SVVTCNTVIKLLCENGR 262
++ G + D + N +++ + V A + ++ G P + +T N +I + GR
Sbjct: 230 EEFGFERDAESLNVLLQCLCRRSHVGAANSYFNSVK--GKIPFNCMTYNVIIGGWSKFGR 287
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVM 319
V E V EM + G PD +++ L + +I + +F M E G P + Y
Sbjct: 288 VSEMQRVFEEMEEDGFSPDCLSFSYLLEGLGRAGKIEDAVMIFGSMEEKGCVPDTNVYNA 347
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++ F G ++ + C P+ Y ++ LI + A + +EM +G
Sbjct: 348 MISNFISVGNFDECMKYYRCLLSKNCDPNIDTYTRMISGLIKASKVADALEMFDEMLDRG 407
Query: 380 LSAK 383
+ K
Sbjct: 408 MVTK 411
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 114/280 (40%), Gaps = 16/280 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + A +FN V+ F T YN +I KF + M+++ S P
Sbjct: 249 CRRSHVGAANSYFNSVKGKIPFNCMT--YNVIIGGWSKFGRVSEMQRVFEEMEEDGFS-P 305
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELC 124
+ +F + + A + +A+ F ++E G + D Y ++ + E +
Sbjct: 306 DCLSFSYLLEGLGRAGKIEDAVMIFGSMEEKGCVPDTNVYNAMISNFISVGNFDECMKY- 364
Query: 125 FGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
+ L+ N Y ++ G K S E ++EM RG+V + +
Sbjct: 365 --------YRCLLSKNCDPNIDTYTRMISGLIKASKVADALEMFDEMLDRGMVTKTGTVT 416
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+++ +C G P A+ +Y + +K G K+ + AY ++ + ++++ EM+E
Sbjct: 417 SFIEPLCSFGPPHAAMVIYTKARKVGCKISLSAYKLLLMRLSRFGKCGMMLKIWDEMQES 476
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
G + +I LC G+ A V+ E +KG P
Sbjct: 477 GYSSDMEVYEYLISGLCNIGQFENAVLVMEESMRKGFCPS 516
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 154/351 (43%), Gaps = 43/351 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN+++ + E D + ++ M++ ++ PN TF M A + A F++
Sbjct: 47 TYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDE 106
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ GL +V YN +L G+
Sbjct: 107 MVREGLAPDVVS----------------------------------------YNTLLSGY 126
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K+ + + EM +RG+V D+ +++ + CK+G +AV L +M+++G++M+
Sbjct: 127 CKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNE 186
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V + +I +D A+ EMR+ G QPSVV N +I C+ GR+ A ++ E
Sbjct: 187 VTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIRE 246
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREILGLF---DRMIESGIRPKMDTYVMLLRKFGRWGF 329
M K PDV+TY K + F +M++ G+ P TY L+R
Sbjct: 247 MEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKR 306
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
L +++ M +LG PDEF Y L+D +G ++ A +EM KG+
Sbjct: 307 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGV 357
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 114/220 (51%), Gaps = 10/220 (4%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M + GV ++++Y+I + +C G+ +AV + +M+ G + V YNT++ A +
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 228 VDFAMRVYREMREMG-CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY- 285
+D A RV MRE G +P++VT N+++ LC+ GR+ A V EM ++G PDV++Y
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 286 -----HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
+C CL E L +F M + G+ P + T+ L+ + G L + +M
Sbjct: 121 TLLSGYCKVGCLH---ESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM 177
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
E G +E + AL+D KG LD A EEM G+
Sbjct: 178 RERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGI 217
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 158/351 (45%), Gaps = 27/351 (7%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+P+ TF + A + +A+ ++ E GL+ +EV++ L+D C+ K ++
Sbjct: 148 VPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCK-KGFLDDAL 206
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L E + G V YN ++ G+ K+ RE EM+ + V D+ +YS
Sbjct: 207 LAVEEMRKCGIQPSV-----VCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 261
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ CK G A +L ++M KKG+ D + Y+++IR + + ++ A ++ M ++G
Sbjct: 262 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 321
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP------- 295
QP T T+I C+ G V +A ++ EM +KG +PDV+TY L K
Sbjct: 322 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 381
Query: 296 REILGL-----------FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
R + L +D ++ + + + V LL+ F G ++ V++ M +
Sbjct: 382 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 441
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
D Y+ L+ G + A + ++M G S P LV+G
Sbjct: 442 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFS--PNSTSTISLVRG 490
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 98/197 (49%), Gaps = 6/197 (3%)
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M + G+ +V YN ++RA+ ++ A+ V +MR GC P+ VT NT++ C G
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 263 VREAYAVLAEMPKKGCV-PDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYV 318
+ A V++ M ++G P+++T++ L K + G +FD M+ G+ P + +Y
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
LL + + G L V+ +M + G PD + +L+ A G L+ A +M +
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180
Query: 379 GLSAKPREELGTKLVQG 395
GL + E T L+ G
Sbjct: 181 GL--RMNEVTFTALIDG 195
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 185/396 (46%), Gaps = 27/396 (6%)
Query: 13 RALEFFNWVETDCHFTHTTDTYNSVIDILG---------KFFEFDLSWNLIHRMKDNPSS 63
+A++ F+ + + + ++NSV++++ +F+++ ++ N+ N +
Sbjct: 130 KAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNM------NMNI 183
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQE 122
PN +F ++ K V+ A+ F + E L D +YC L+D LC+ + + EA
Sbjct: 184 SPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV- 242
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L E ++ G S IYN+++ G K + + + M +G V + +Y+
Sbjct: 243 LLLDEMQSEGCSP-----SPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNT 297
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ +C GK KAV L + M + V Y T+I + A+R+ M E G
Sbjct: 298 LIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERG 357
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREIL 299
+ + +I L + G+ EA ++ +M +KGC P+++ Y C E KP E
Sbjct: 358 YHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAK 417
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ +RMI SG P TY L++ F + G VWK+M++ GCS ++F Y+ L+D L
Sbjct: 418 EILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGL 477
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
G + A +M G+ KP + +++G
Sbjct: 478 CGVGRVKEAMMVWSKMLTIGI--KPDTVAYSSIIKG 511
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 164/358 (45%), Gaps = 21/358 (5%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDN---PSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
YN +ID L K + DL+ + ++ DN +PN T+ + +++A+
Sbjct: 260 YNVLIDGLCK--KGDLTR--VTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLL 315
Query: 91 NKL-DEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
++ + ++V+Y L++ L + + +A L + G+ +N+ IY++++
Sbjct: 316 ERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRL-LSSMEERGY----HLNQ-HIYSVLI 369
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G FK + W +M ++G ++ YS+ +D +C+ GKP +A ++ M G
Sbjct: 370 SGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCL 429
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
+ Y+++++ + + A++V++EM + GC + + +I LC GRV+EA V
Sbjct: 430 PNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMV 489
Query: 270 LAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMI---ESGIRPKMDTYVMLLRK 323
++M G PD + Y + L L L+ M+ E +P + TY +LL
Sbjct: 490 WSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDG 549
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG-MLDMARKYDEEMFAKGL 380
+ + M + GC PD N ++ L +K D R + EE+ + L
Sbjct: 550 LCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLL 607
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 163/344 (47%), Gaps = 23/344 (6%)
Query: 40 ILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK 99
+LGK + +S NL T+ I + A + EA+ + + + +
Sbjct: 211 LLGKVIQRGMSINLF--------------TYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP 256
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWG 159
D V+Y L+ LC+ EA + + G + + T YN I+ G+ K+S
Sbjct: 257 DVVTYNTLIRGLCKKSMPQEAMHYL----RRMMNQGCLPDDFT--YNTIIDGYCKISMVQ 310
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+ E ++ +G V D +Y ++ +C G +A++L+ E + KGIK D+V YN+++
Sbjct: 311 EATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLV 370
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
+ + + + A++V EM E GC P + T N VI LC+ G + +A V+ + KG +
Sbjct: 371 KGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYL 430
Query: 280 PDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVV 336
PDV T++ K ++ L L +RM E GI P TY +L + G + V
Sbjct: 431 PDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNET 490
Query: 337 WKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+++M GC P+ YN L++ ++ A K +M +GL
Sbjct: 491 FQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 534
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 167/381 (43%), Gaps = 36/381 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++I L K + + + RM N +P+ T+ + Y +V EA
Sbjct: 260 TYNTLIRGLCKKSMPQEAMHYLRRMM-NQGCLPDDFTYNTIIDGYCKISMVQEATELLKD 318
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG-------FSGLVE------ 138
G + D+V+YC+L++ LC V A EL F E + G ++ LV+
Sbjct: 319 AVFKGFVPDQVTYCSLINGLCAEGDVERALEL-FNEAQAKGIKPDIVVYNSLVKGLCLQG 377
Query: 139 --------MNK---------TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
MN+ + YN+++ G KM + +G + D+ +++
Sbjct: 378 LILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFN 437
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+D CK K A++L + M + GI D + YN+V+ + + V+ ++EM
Sbjct: 438 TLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK 497
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG- 300
GC P+ +T N +I+ C + ++ EA V+ +M ++G PD ++++ + ++ G
Sbjct: 498 GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGA 557
Query: 301 --LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
LF ++ E G DT+ L+ F + ++ +M G D + Y L+D
Sbjct: 558 YLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDG 617
Query: 359 LIDKGMLDMARKYDEEMFAKG 379
+D A + EM KG
Sbjct: 618 SCKTANVDRAYMHLVEMIKKG 638
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 156/387 (40%), Gaps = 49/387 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
YN+++D L D + + RM S P+ T I + + + A+
Sbjct: 90 AYNAIMDALVDAAYHDQAHKVYVRMLAAGVS-PDLHTHTIRLRSFCLTARPHIALRLLRA 148
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
L G V+YC +V L + H +A++L F L NK +L
Sbjct: 149 LPHRG---AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNK------VLHAL 199
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K + ++ +RG+ +L +Y+I++ +C++G+ +AV+L M+ + DV
Sbjct: 200 CKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP-DV 258
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V YNT+IR + AM R M GC P T NT+I C+ V+EA +L +
Sbjct: 259 VTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKD 318
Query: 273 MPKKGCVPDVITYHCFFR--CLEKPRE-ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
KG VPD +TY C E E L LF+ GI+P + Y L++ G
Sbjct: 319 AVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGL 378
Query: 330 LRPVFVVWKKMEELGCSPD-----------------------------------EFAYNA 354
+ V +M E GC PD F +N
Sbjct: 379 ILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNT 438
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLS 381
L+D + LD A + E M+ G++
Sbjct: 439 LIDGYCKRLKLDSALQLVERMWEYGIA 465
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 163/390 (41%), Gaps = 22/390 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C D +RALE FN + YNS++ L + +++ M + P
Sbjct: 339 CAEGDVERALELFNEAQAK-GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH-P 396
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ I+ +++A N G L D ++ L+D C+ + A +L
Sbjct: 397 DIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLV 456
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+ + G+ T YN +L G K + E ++EM +G + +Y+I +
Sbjct: 457 ----ERMWEYGIAP--DTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILI 510
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ C+S K +A K+ +M ++G+ D V++NT+I + ++ A +++++ E G
Sbjct: 511 ENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYS 570
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF----RCLEKPREILG 300
+ T NT+I + A + EM KG D TY + R +
Sbjct: 571 ATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMH 630
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L + MI+ G P M T+ ++ + + M ++G P+ +VD ++
Sbjct: 631 LVE-MIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPE------VVDTIL 683
Query: 361 --DKGMLDMARKYDEEMFAKGLSAKPREEL 388
DK + + E++ KG + P E+
Sbjct: 684 NADKKEIAAPKILVEDLMKKGHISYPTYEV 713
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 108/270 (40%), Gaps = 35/270 (12%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+Y +R + + + +E MD +Y+ MD + + +A K+Y M
Sbjct: 55 LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 114
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ------------------- 244
G+ D+ + +R+ ++ A+R+ R + G
Sbjct: 115 LAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDAR 174
Query: 245 ------------PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
P++ N V+ LC+ G V EA +L ++ ++G ++ TY+ + R L
Sbjct: 175 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 234
Query: 293 -EKPR--EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE 349
E R E + L D M + P + TY L+R + + ++M GC PD+
Sbjct: 235 CEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDD 293
Query: 350 FAYNALVDALIDKGMLDMARKYDEEMFAKG 379
F YN ++D M+ A + ++ KG
Sbjct: 294 FTYNTIIDGYCKISMVQEATELLKDAVFKG 323
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
R+ + I P YV +R + R G LR +++M+ C P AYNA++DAL+D
Sbjct: 45 SRLSPATIHP---LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDA 101
Query: 363 GMLDMARKYDEEMFAKGLS 381
D A K M A G+S
Sbjct: 102 AYHDQAHKVYVRMLAAGVS 120
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 167/351 (47%), Gaps = 11/351 (3%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
Y+ +ID L K D +++L M S P+ T+ I+ + +N A+ N++
Sbjct: 201 YSMIIDRLCKDTLVDEAYDLYTEMVGKGIS-PDVVTYSILVSGFCIVGQLNRAIDLLNEM 259
Query: 94 DEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ ++ +Y LVDALC+ V EA+ + V V ++ +Y+ ++ G+
Sbjct: 260 VLENINPDIYTYTILVDALCKEGKVKEAENVL-----AVMVKACVNLDVV-VYSTLMDGY 313
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
++ + + M + GV D+H YSI ++ +CK + +A+ L++E+ +K + D
Sbjct: 314 CLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDT 373
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V Y ++I + S + + ++ EM + G P V+T N +I LC+NG + A A+ +
Sbjct: 374 VTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNK 433
Query: 273 MPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M + P+V T+ L K + L F ++ G + TY +++ + G
Sbjct: 434 MKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGL 493
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
L + +ME+ GC D + ++ A DK D A K EM A+GL
Sbjct: 494 LDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGL 544
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 139/287 (48%), Gaps = 9/287 (3%)
Query: 102 VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKC 161
V Y ++D LC+ V EA +L + E G S V Y++++ G+ + +
Sbjct: 199 VIYSMIIDRLCKDTLVDEAYDL-YTEMVGKGISPDV-----VTYSILVSGFCIVGQLNRA 252
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
+ EM + D+++Y+I +D +CK GK +A + M K + +DVV Y+T++
Sbjct: 253 IDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDG 312
Query: 222 VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
+ V+ A RV+ M +MG P V + +I LC+ RV EA + E+ +K VPD
Sbjct: 313 YCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPD 372
Query: 282 VITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWK 338
+TY CL K I LFD M++ G P + TY L+ + G L ++
Sbjct: 373 TVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFN 432
Query: 339 KMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
KM++ P+ + + L+D L G L A ++ +++ KG R
Sbjct: 433 KMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVR 479
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 122/262 (46%), Gaps = 15/262 (5%)
Query: 131 VGFSGLVEMNK------TKIYNMILRGWFKMSWWGKCRE---FWEEMDKRGVVKDLHSYS 181
+ FSG+ ++ K T N +++G + GK +E F +++ +G SY
Sbjct: 111 LAFSGVSKILKLGYQPNTITLNTLMKG---LCLEGKVKEALRFHDKVLAQGFRLSGISYG 167
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
I ++ +CK G+ A++L + +++ I+ +VV Y+ +I + VD A +Y EM
Sbjct: 168 ILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGK 227
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREI 298
G P VVT + ++ C G++ A +L EM + PD+ TY L K +E
Sbjct: 228 GISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEA 287
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+ M+++ + + Y L+ + + V+ M ++G +PD Y+ +++
Sbjct: 288 ENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMING 347
Query: 359 LIDKGMLDMARKYDEEMFAKGL 380
L +D A EE+ K +
Sbjct: 348 LCKIKRVDEALNLFEEIHQKNM 369
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 99/222 (44%), Gaps = 3/222 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+N IL + + +++M+ V D + +I ++ C G+ A ++
Sbjct: 61 FNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKIL 120
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K G + + + NT+++ + + V A+R + ++ G + S ++ +I +C+ G R
Sbjct: 121 KLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETR 180
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLL 321
A +L + + P+V+ Y L K E L+ M+ GI P + TY +L+
Sbjct: 181 AAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILV 240
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
F G L + +M +PD + Y LVDAL +G
Sbjct: 241 SGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEG 282
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 3/189 (1%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A+ LYK+M+ ++ D N +I V A ++ ++G QP+ +T NT++K
Sbjct: 77 AISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMK 136
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRP 312
LC G+V+EA ++ +G I+Y + K R + L R+ IRP
Sbjct: 137 GLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRP 196
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
+ Y M++ + + + + ++ +M G SPD Y+ LV G L+ A
Sbjct: 197 NVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLL 256
Query: 373 EEMFAKGLS 381
EM + ++
Sbjct: 257 NEMVLENIN 265
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 91/237 (38%), Gaps = 42/237 (17%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C AL F + + T TY S+ID L K W+L M
Sbjct: 349 CKIKRVDEALNLFEEIHQK-NMVPDTVTYTSLIDCLCKSGRISYVWDLFDEM-------- 399
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCF 125
LD D ++Y NL+DALC+ H+ A L F
Sbjct: 400 ---------------------------LDRGQPPDVITYNNLIDALCKNGHLDRAIAL-F 431
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
+ K+ + ++L G K+ EF++++ +G ++ +Y++ ++
Sbjct: 432 NKMKDQAIRP-----NVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMIN 486
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+CK G +A+ L M+ G D V + +IRA + D A ++ REM G
Sbjct: 487 GLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARG 543
>gi|255551140|ref|XP_002516618.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544438|gb|EEF45959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 577
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 175/378 (46%), Gaps = 29/378 (7%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKR 76
F W + F +T +NSVI+ LGK EFD +W L+ + + + + TF I+ +R
Sbjct: 109 LFVWADKQPEFESSTTLFNSVINALGKMKEFDSAWCLVL----DRTGLVSSDTFAILIRR 164
Query: 77 YVTAHLVNEAMGTFNKLDEFGLK-DEVSYCN-------LVDALCEYKHVIEAQELCFGEN 128
Y A + A+ TF E+ + D + N L+D+LC+ HV A+E F
Sbjct: 165 YTRAGMPQSAIRTF----EYAISLDFICDYNCDALLEILLDSLCKEGHVRVAKEY-FDSR 219
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
K + + + +IYN++L GWF+ W EM K V + +Y ++ C
Sbjct: 220 KQLDSCWIPHV---RIYNIMLNGWFRSRKLKHAERLWLEMKKNNVSPSVVTYGTLVEGYC 276
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV---GVSEGVDFAMRVYREMREMGCQP 245
+ + +A++L M+K+GI+ + + YN +I A+ G + V M + + E G P
Sbjct: 277 RMRRVERAIELVDVMRKEGIEPNALVYNPIIDALAEEGRFKEVSGMMEYFLQ-SESG--P 333
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLF 302
++ T N+++K C+ A VL M +G VP TY+ FFR K E + L+
Sbjct: 334 TISTYNSLVKGYCKAKDPVGASKVLKMMISRGFVPTPTTYNYFFRHFSKFGMIEEGMNLY 393
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
+MIESG P T+ +LL+ L + K+M GC D L+
Sbjct: 394 TKMIESGYTPDRLTFHLLLKMLCEEERLDLAVQISKEMRSRGCDMDLATSTMLIHLFCRM 453
Query: 363 GMLDMARKYDEEMFAKGL 380
+ A E+M KG+
Sbjct: 454 HRFEEAFMEFEDMIQKGI 471
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 103/234 (44%), Gaps = 14/234 (5%)
Query: 57 MKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCE-- 113
MK N S P+ T+ + + Y V A+ + + + G++ + + Y ++DAL E
Sbjct: 256 MKKNNVS-PSVVTYGTLVEGYCRMRRVERAIELVDVMRKEGIEPNALVYNPIIDALAEEG 314
Query: 114 -YKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRG 172
+K V E S YN +++G+ K + + M RG
Sbjct: 315 RFKEVSGMMEYFLQSESGPTIS---------TYNSLVKGYCKAKDPVGASKVLKMMISRG 365
Query: 173 VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM 232
V +Y+ + K G + + LY +M + G D + ++ +++ + E +D A+
Sbjct: 366 FVPTPTTYNYFFRHFSKFGMIEEGMNLYTKMIESGYTPDRLTFHLLLKMLCEEERLDLAV 425
Query: 233 RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
++ +EMR GC + T +I L C R EA+ +M +KG VP +T+
Sbjct: 426 QISKEMRSRGCDMDLATSTMLIHLFCRMHRFEEAFMEFEDMIQKGIVPQYLTFQ 479
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 78/183 (42%), Gaps = 9/183 (4%)
Query: 103 SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCR 162
+Y +LV C+ K + A ++ K + G V T YN R + K +
Sbjct: 337 TYNSLVKGYCKAKDPVGASKVL----KMMISRGFVPTPTT--YNYFFRHFSKFGMIEEGM 390
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+ +M + G D ++ + + ++C+ + AV++ KEM+ +G MD+ +I
Sbjct: 391 NLYTKMIESGYTPDRLTFHLLLKMLCEEERLDLAVQISKEMRSRGCDMDLATSTMLIHLF 450
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG---RVREAYAVLAEMPKKGCV 279
+ A + +M + G P +T + L + G R R+ +++ +P +
Sbjct: 451 CRMHRFEEAFMEFEDMIQKGIVPQYLTFQRLNDELRKRGMVERARKLSDMMSSVPHSTNL 510
Query: 280 PDV 282
P+
Sbjct: 511 PNT 513
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 122/238 (51%), Gaps = 3/238 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G+ K + + M RG + D+ +Y+I + C GK A+++++E+
Sbjct: 141 YNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELL 200
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K + V+ Y +I A + G+D AM++ EM G +P +T N +I+ +C+ V
Sbjct: 201 KDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVD 260
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLL 321
+A+ +L + +GC PD+ITY+ R L K E L MI G +P + T+ +L+
Sbjct: 261 KAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILI 320
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R G + + + M+E G PD + Y+ L+ +G LD+A ++ E M + G
Sbjct: 321 GTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDG 378
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 162/368 (44%), Gaps = 15/368 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
TYN +I + DL+ + + KDN P T+ I+ + + ++ AM +
Sbjct: 175 TYNIMIGSFCSRGKLDLALEIFEELLKDNCE--PTVITYTILIEATILDGGIDVAMKLLD 232
Query: 92 KLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
++ GL+ D ++Y ++ +C+ V +A EL + ++ YN++LR
Sbjct: 233 EMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDII------TYNILLR 286
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
W + + EM G ++ ++SI + +C+ GK +AV L + MK+KG+K
Sbjct: 287 TLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKP 346
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
D Y+ +I +D A M GC P +V NT++ LC G+ +A V
Sbjct: 347 DAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVF 406
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPRE---ILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
++ + GC P+V +Y+ F L + L + +++ GI P TY L+ R
Sbjct: 407 EKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRD 466
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREE 387
G + + M+ P+ +YN ++ L + A + M KG +P E
Sbjct: 467 GMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKG--CQPNET 524
Query: 388 LGTKLVQG 395
L++G
Sbjct: 525 TYILLIEG 532
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 91/229 (39%), Gaps = 37/229 (16%)
Query: 188 CKSGKPWKAVKLYKEMKKKGI----------------------------------KMDVV 213
C++GK +++ + M KG K DV
Sbjct: 80 CRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYGKPDVF 139
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
AYN +I + ++ A RV M+ G P VVT N +I C G++ A + E+
Sbjct: 140 AYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEEL 199
Query: 274 PKKGCVPDVITYHCFFRC--LEKPREI-LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
K C P VITY L+ ++ + L D M+ G+ P TY ++R + +
Sbjct: 200 LKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMV 259
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
F + + + GC PD YN L+ L+ +G K EM + G
Sbjct: 260 DKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIG 308
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 152/306 (49%), Gaps = 25/306 (8%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PNH TF ++ + + + +A+ T + + FGL D V+Y L++A C + EA+ L
Sbjct: 206 PNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 265
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
++ G+ T YN ++ + ++ W + + E M G DL +Y++
Sbjct: 266 LARMKRD----GIAPTQPT--YNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVL 319
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKM-DVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+C++GK +A +L EM++ G + DVV YNT++ A A+R+ EMR+ G
Sbjct: 320 AMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKG 379
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---L 299
+P++VT N V+K LC+ G++ EA L ++ ++G PDVITY+ K +
Sbjct: 380 VKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAF 439
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL-------GCSPDEFAY 352
L D M+ G+ KMDT+ + + R ++ EEL G PDE +Y
Sbjct: 440 TLMDEMVGKGL--KMDTFTLNTVLYNLCKMKR-----YEDAEELLHSPPQRGFVPDEVSY 492
Query: 353 NALVDA 358
++ A
Sbjct: 493 GTVMAA 498
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 159/347 (45%), Gaps = 10/347 (2%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++++ + + L+ RMK + P T+ + + + +A
Sbjct: 245 TYNTLLNAHCRKGMLGEARALLARMKRD-GIAPTQPTYNTLVSAFARLGWIKQATKVVES 303
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ +G + ++ +Y L LC+ V EA L E + +G + + YN ++
Sbjct: 304 MTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRL-KDEMERLGTA----LPDVVTYNTLVDA 358
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
FK EEM +GV L +++I + +CK GK +A+ +++ ++G+ D
Sbjct: 359 CFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPD 418
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V+ YNT+I A + V A + EM G + T NTV+ LC+ R +A +L
Sbjct: 419 VITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLH 478
Query: 272 EMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
P++G VPD ++Y K P L L+D+MIE + P + TY L++ R
Sbjct: 479 SPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRME 538
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
L+ + E G PDE YN ++ A +G L+ A ++ +M
Sbjct: 539 RLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKM 585
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 153/335 (45%), Gaps = 11/335 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN+++D K+ + L+ M+D P T I+ K + EA+G K
Sbjct: 351 TYNTLVDACFKWRCSSDALRLLEEMRDK-GVKPTLVTHNIVVKSLCKEGKLEEALGKLEK 409
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E GL D ++Y L+DA C+ +V +A L ++ VG GL +M+ T N +L
Sbjct: 410 IAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLM---DEMVG-KGL-KMD-TFTLNTVLYN 463
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
KM + E +RG V D SY M K P A++L+ +M ++ +
Sbjct: 464 LCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ YNT+I+ + E + A+ E E G P T N +I C+ G + A+
Sbjct: 524 ISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHN 583
Query: 272 EMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+M + PDV+T + CL K + L LF+ +E G + + TY L++ + G
Sbjct: 584 KMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVG 643
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
+ + ME G PD F YN ++ AL + G
Sbjct: 644 DVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAG 678
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 168/391 (42%), Gaps = 47/391 (12%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TYN+++ + + ++ M P+ T+ ++ A V+EA
Sbjct: 277 TQPTYNTLVSAFARLGWIKQATKVVESMTAY-GFEPDLRTYNVLAMGLCQAGKVDEAFRL 335
Query: 90 FNKLDEFG--LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
++++ G L D V+Y LVDA +++ +A L E ++ G + + + ++
Sbjct: 336 KDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRL-LEEMRDKGVKPTLVTHNIVVKSL 394
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
G + + GK + EE G+ D+ +Y+ +D CK+G KA L EM KG
Sbjct: 395 CKEGKLEEAL-GKLEKIAEE----GLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKG 449
Query: 208 IKMDV-----------------------------------VAYNTVIRAVGVSEGVDFAM 232
+KMD V+Y TV+ A + A+
Sbjct: 450 LKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPAL 509
Query: 233 RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
R++ +M E PS+ T NT+IK LC R++EA L E +KG VPD TY+
Sbjct: 510 RLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAY 569
Query: 293 EKPREILGLF---DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE 349
K ++ F ++M+E+ +P + T L+ G L +++ E G D
Sbjct: 570 CKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDV 629
Query: 350 FAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
YN L+ ++ G +D A + ++M KGL
Sbjct: 630 ITYNTLIQSMCKVGDVDTALHFFDDMEVKGL 660
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 118/258 (45%), Gaps = 13/258 (5%)
Query: 133 FSGLVEMNKTK---IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
F L+E+ +N+++ M G+ D +Y+ ++ C+
Sbjct: 196 FRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCR 255
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
G +A L MK+ GI YNT++ A + A +V M G +P + T
Sbjct: 256 KGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRT 315
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKG-CVPDVITYH-----CF-FRCLEKPREILGLF 302
N + LC+ G+V EA+ + EM + G +PDV+TY+ CF +RC + L L
Sbjct: 316 YNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRC---SSDALRLL 372
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
+ M + G++P + T+ ++++ + G L +K+ E G +PD YN L+DA
Sbjct: 373 EEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKA 432
Query: 363 GMLDMARKYDEEMFAKGL 380
G + A +EM KGL
Sbjct: 433 GNVAKAFTLMDEMVGKGL 450
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 6/217 (2%)
Query: 170 KRGVVKDLHSYSIYMDIMCKSGK--PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
+RGV L + + + + +S P ++ +++ + + + + +N ++
Sbjct: 164 RRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGT 223
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
+ A+ M+ G P VT NT++ C G + EA A+LA M + G P TY+
Sbjct: 224 LADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNT 283
Query: 288 FFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
+ ++ + + M G P + TY +L + G + F + +ME LG
Sbjct: 284 LVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLG 343
Query: 345 CS-PDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ PD YN LVDA A + EEM KG+
Sbjct: 344 TALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGV 380
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 103/261 (39%), Gaps = 47/261 (18%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQE 122
IP+ +T+ + K + EA+ N+ E GL DE +Y ++ A C+ + A
Sbjct: 521 IPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFR 580
Query: 123 LCFGENKNV--GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
NK V F V T + + L G K+ K E W E +G D+ +Y
Sbjct: 581 F---HNKMVENSFKPDVVTCNTLMNGLCLHG--KLDKALKLFESWVE---KGKKVDVITY 632
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ + MCK G A+ + +M+ KG++ D YN V+ A+ + + A + ++ +
Sbjct: 633 NTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLAD 692
Query: 241 MGCQPSVVTCNTV------------------------------------IKLLCENGRVR 264
G C + + LC G+++
Sbjct: 693 SGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLK 752
Query: 265 EAYAVLAEMPKKGCVPDVITY 285
EA AVL EM +KG D TY
Sbjct: 753 EAKAVLDEMMQKGMPVDCSTY 773
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 275 KKGCVPDVITYHCFFRCLEK-----PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
++G P + + L + P+ L +F +IE + P T+ +L+ G
Sbjct: 164 RRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGT 223
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
L M+ G SPD YN L++A KGML AR M G++
Sbjct: 224 LADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIA 275
>gi|242062936|ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
gi|241932588|gb|EES05733.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
Length = 502
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 169/349 (48%), Gaps = 37/349 (10%)
Query: 48 DLSWNLIHRMKDN---PSSI----PNHA------TFRIMFKRYVTAHL-VNEAMGTFNKL 93
DL+ +L R++ SSI P H TF IMF+R+ +H + A+ F L
Sbjct: 107 DLALDLAARLRHPRQLTSSILALFPRHGLAFTPRTFPIMFERFAVSHRRPDHAVRFFLSL 166
Query: 94 D-EFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
G+ ++ N L+DAL + +H +A L + + YN + G
Sbjct: 167 HRSHGVAQDLPLFNSLLDALVKSRHAGKAASLVRALERRFPPDAVT-------YNTLADG 219
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG---- 207
W ++ + + +M + G+ +Y+I + +SG+ A + +MKK+G
Sbjct: 220 WCRVKDTSRALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRGSNDE 279
Query: 208 -IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
K DVV+Y TV+ +GV+ +D A +V+ EM GC PS+ T N +I++ C+ G V +A
Sbjct: 280 NCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKKGNVEDA 339
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRK 323
AV +M +KG +P+V+TY R L +I + L D+M G P + TY +L+
Sbjct: 340 VAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTYNVLIGY 399
Query: 324 FGRWGFLRPVFVVWKKM---EELGCSPDEFAYNALVDAL-IDKGMLDMA 368
G + +++ M EE C P++ YN ++ A+ + K DMA
Sbjct: 400 LFEEGDIEKALHLFETMSKGEE--CLPNQDTYNIIISAMFVRKRAEDMA 446
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 172/372 (46%), Gaps = 23/372 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN+++ L + + ++ R P+ T+ I+ + V +AM ++
Sbjct: 214 TYNTILRTLCDSGKLKEAMEVLDRQMQR-ECYPDVITYTILIEATCKESGVGQAMKLLDE 272
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL-----CFGENKNVGFSGLVEMNKTKIYN 146
+ + G K D V+Y L++ +C+ + EA +G NV +N
Sbjct: 273 MRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNV-----------ITHN 321
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
+ILR W +F EM ++G + +++I ++ +C+ G +A+ + ++M +
Sbjct: 322 IILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQH 381
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
G + ++YN ++ A+ + ++ A+ M GC P +VT NT++ LC++G+V A
Sbjct: 382 GCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVA 441
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCLE---KPREILGLFDRMIESGIRPKMDTYVMLLRK 323
+L ++ KGC P +ITY+ L K + + L D M G++P + TY L+
Sbjct: 442 VEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGG 501
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAK 383
R G + + +EE+G P+ YN+++ L A + M A+G K
Sbjct: 502 LSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARG--CK 559
Query: 384 PREELGTKLVQG 395
P E L++G
Sbjct: 560 PTETSYMILIEG 571
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 122/238 (51%), Gaps = 6/238 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN+++ G+ K G + +D+ V D+ +Y+ + +C SGK +A+++
Sbjct: 183 YNVLISGYCKTGEIGSALQL---LDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQM 239
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
++ DV+ Y +I A GV AM++ EMR+ GC+P VVT N +I +C+ GR+
Sbjct: 240 QRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLD 299
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLL 321
EA L MP GC P+VIT++ R + + MI G P + T+ +L+
Sbjct: 300 EAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILI 359
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R G + V +KM + GC+P+ +YN L+ AL ++ A +Y + M ++G
Sbjct: 360 NFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRG 417
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 137/294 (46%), Gaps = 18/294 (6%)
Query: 94 DEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWF 153
D + D ++Y L+ C+ + A +L + YN ILR
Sbjct: 173 DSGAVPDVITYNVLISGYCKTGEIGSALQL---------LDRMSVSPDVVTYNTILR--- 220
Query: 154 KMSWWGKCREFWEEMDK---RGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
+ GK +E E +D+ R D+ +Y+I ++ CK +A+KL EM+ KG K
Sbjct: 221 TLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKP 280
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
DVV YN +I + +D A+R M GCQP+V+T N +++ +C GR +A L
Sbjct: 281 DVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFL 340
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
AEM +KGC P V+T++ L + I + + ++M + G P +Y LL +
Sbjct: 341 AEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKD 400
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ M GC PD YN L+ AL G +D+A + ++ +KG S
Sbjct: 401 KKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCS 454
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 112/222 (50%), Gaps = 6/222 (2%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+F E+M RG + D+ + + + +CK+GK WKA ++ + ++ G DV+ YN +I
Sbjct: 131 KFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGY 190
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
+ + A+++ + M P VVT NT+++ LC++G+++EA VL ++ C PDV
Sbjct: 191 CKTGEIGSALQL---LDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDV 247
Query: 283 ITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
ITY K + + L D M + G +P + TY +L+ + G L
Sbjct: 248 ITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNH 307
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
M GC P+ +N ++ ++ G A K+ EM KG S
Sbjct: 308 MPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCS 349
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 235 YREMREMGCQ---PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC 291
++ + +M C+ P ++ C ++I+ LC+ G+ +A V+ + G VPDVITY+
Sbjct: 130 FKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISG 189
Query: 292 LEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
K EI L L DRM + P + TY +LR G L+ V + + C PD
Sbjct: 190 YCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPD 246
Query: 349 EFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
Y L++A + + A K +EM KG
Sbjct: 247 VITYTILIEATCKESGVGQAMKLLDEMRDKG 277
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 6/121 (4%)
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIE 307
N ++ L NG + E + L +M +G +PD+I R L K + + + + +
Sbjct: 114 NNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILED 173
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
SG P + TY +L+ + + G + + +M SPD YN ++ L D G L
Sbjct: 174 SGAVPDVITYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLKE 230
Query: 368 A 368
A
Sbjct: 231 A 231
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 164/343 (47%), Gaps = 26/343 (7%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELC 124
P T+ I+ + A+ + +A+ F K+ EF +E +Y +V+ LC+ + +A E+
Sbjct: 5 PTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYEV- 63
Query: 125 FGENKNVGFSGLVEMNKTK-------IYNMILRGWFKMSWWGKCREFWEEMDKR-GVVKD 176
L EM K Y+ ++ G+ K + E EM R G+ D
Sbjct: 64 -----------LKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPD 112
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
+ +Y+ +D +C+ GK +A ++ +EMK KG++ D ++ +I + VD A+++Y+
Sbjct: 113 VVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYK 172
Query: 237 EMREMGC-QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP 295
E+ +P VVT +I C++G + +A +L M + CVP+V+TY L K
Sbjct: 173 EILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKA 232
Query: 296 REI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
++ L LF RM G P + TY L+ + ++ +M C PD +Y
Sbjct: 233 GDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSY 292
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
NAL+D G ++ A++ +EM K S P T LV+G
Sbjct: 293 NALLDGYCRLGRIEEAKQLFKEMATK--SCLPDRITYTCLVRG 333
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 176/412 (42%), Gaps = 44/412 (10%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTD-TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C AN K+AL F + F + TYN V++ L K ++ ++ M+D S
Sbjct: 18 CKANQLKQALACFEKMR---EFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVA 74
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKL-DEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
P+ T+ + + ++ A ++ G+ D V+Y ++VD LC + A E
Sbjct: 75 PDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACE 134
Query: 123 LCFG------ENKNVGFSGLVE--MNKTKI----------------------YNMILRGW 152
+ E FS L+ N K+ Y ++ G+
Sbjct: 135 MVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGF 194
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K K + M+ R V ++ +YS + +CK+G +A+ L++ M KG +V
Sbjct: 195 CKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNV 254
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V Y T+I + + VD A + EM C P V+ N ++ C GR+ EA + E
Sbjct: 255 VTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKE 314
Query: 273 MPKKGCVPDVITYHCFFR--C----LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
M K C+PD ITY C R C LE+ R +L + +GI P + TY +++ + R
Sbjct: 315 MATKSCLPDRITYTCLVRGFCNASRLEEARFLLE--NMKTAAGIDPDVVTYSIVVAGYSR 372
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
++M +P+ Y++L+D L G +D A + + M K
Sbjct: 373 AKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNK 424
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 172/404 (42%), Gaps = 21/404 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A AL+ + + T + TY ++ID K + + ++ M + +P
Sbjct: 159 CNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVM-EGRKCVP 217
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELC 124
N T+ + A +++A+ F ++ G + + V+Y L+ LC H ++A L
Sbjct: 218 NVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCA-AHKVDAARLL 276
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
E + T YN +L G+ ++ + ++ ++EM + + D +Y+ +
Sbjct: 277 MDE-----MTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLV 331
Query: 185 DIMCKSGKPWKAVKLYKEMK-KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
C + + +A L + MK GI DVV Y+ V+ ++ A +EM
Sbjct: 332 RGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNV 391
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILG 300
P+ VT +++I LC+ GRV A VL M K P V T++ L + E
Sbjct: 392 APNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWK 451
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP-------DEFAYN 353
L M G+ P M TY LL F R G + + +++ M + E A++
Sbjct: 452 LLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFS 511
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGL 397
AL+ L +D A EE+ ++ +P EE +V G L
Sbjct: 512 ALIRGLCKAREIDKAMAVVEELRSR--ECEPAEEDCLAIVDGLL 553
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 166/388 (42%), Gaps = 22/388 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + + ++A++ +E + TY+S++ L K + D + +L RM + +P
Sbjct: 195 CKSGNLEKAMKMLGVMEGRKCVPNVV-TYSSLLHGLCKAGDLDQALDLFRRMT-SKGCVP 252
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N T+ + AH V+ A +++ D VSY L+D C + EA++L
Sbjct: 253 NVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQL- 311
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM-DKRGVVKDLHSYSIY 183
F E + Y ++RG+ S + R E M G+ D+ +YSI
Sbjct: 312 FKEMATKSC-----LPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIV 366
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ ++ + +A + +EM + + + V Y+++I + + VD AM V + M
Sbjct: 367 VAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRV 426
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LG 300
+PSV T N+VI LC G + EA+ +L M G P ++TY + +
Sbjct: 427 EPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYE 486
Query: 301 LFDRM--------IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
LF+ M + + P+ + L+R + + V +++ C P E
Sbjct: 487 LFEVMRKKAKKSSSAANLVPE-QAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDC 545
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKGL 380
A+VD L+ G + A K + GL
Sbjct: 546 LAIVDGLLRAGRTEEAGKLINSISKVGL 573
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 6/145 (4%)
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG 300
M CQP+VVT +I C+ ++++A A +M ++ P+ TY+ L K R
Sbjct: 1 MECQPTVVTWTIIIDGFCKANQLKQALACFEKM-REFVAPNERTYNVVVNGLCKARLTSK 59
Query: 301 LFDRMIE----SGIRPKMDTYVMLLRKFGRWGFL-RPVFVVWKKMEELGCSPDEFAYNAL 355
++ + E + P + TY ++ F + G + R ++ + + G +PD Y ++
Sbjct: 60 AYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSV 119
Query: 356 VDALIDKGMLDMARKYDEEMFAKGL 380
VD L G +D A + EM KG+
Sbjct: 120 VDGLCRDGKMDRACEMVREMKLKGV 144
>gi|15242530|ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39980, chloroplastic; Flags: Precursor
gi|10176990|dbj|BAB10222.1| unnamed protein product [Arabidopsis thaliana]
gi|332007115|gb|AED94498.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 678
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 188/408 (46%), Gaps = 21/408 (5%)
Query: 3 TLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPS 62
+L NDW+R+L +WV + +T + YN V+ + + +FD++ L M+
Sbjct: 127 SLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRAL 186
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDA---LCEYKHVI 118
+ P+ T+ + + + + A+ K+++ + D V Y NL++ LC+Y I
Sbjct: 187 A-PDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAI 245
Query: 119 EAQELCFGENKNVGFS-GLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
F K G + LV YN ++ + K + + R +EM++ GV+ +
Sbjct: 246 S----IFSRLKRSGITPDLVA------YNSMINVYGKAKLFREARLLIKEMNEAGVLPNT 295
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
SYS + + ++ K +A+ ++ EMK+ +D+ N +I G + V A R++
Sbjct: 296 VSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWS 355
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
+R+M +P+VV+ NT++++ E EA + M +K +V+TY+ + K E
Sbjct: 356 LRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTME 415
Query: 298 ---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
L M GI P TY ++ +G+ G L +++K+ G D+ Y
Sbjct: 416 HEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQT 475
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQS 402
++ A G++ A++ E+ K PRE T L + G E +
Sbjct: 476 MIVAYERVGLMGHAKRLLHEL--KLPDNIPRETAITILAKAGRTEEAT 521
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 168/382 (43%), Gaps = 44/382 (11%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D+ +A+ F+ ++ T YNS+I++ GK F + LI M + +PN +
Sbjct: 240 DYSKAISIFSRLKRSG-ITPDLVAYNSMINVYGKAKLFREARLLIKEMNE-AGVLPNTVS 297
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNL-VDALCEYKHVIEAQELCFGEN 128
+ + YV H EA+ F ++ E +++ CN+ +D + V EA L +
Sbjct: 298 YSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLR 357
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
K +V YN ILR + + +G+ + M ++ + +++ +Y+ + I
Sbjct: 358 KMDIEPNVVS------YNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 411
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ---- 244
K+ + KA L +EM+ +GI+ + + Y+T+I G + +D A +++++R G +
Sbjct: 412 KTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQV 471
Query: 245 ---------------------------PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
P + T I +L + GR EA V + + G
Sbjct: 472 LYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESG 531
Query: 278 CVPDVITYHCFFRCLEKPRE---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
V D+ + C + + ++ +F++M +G P + M+L +G+
Sbjct: 532 EVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKAD 591
Query: 335 VVWKKMEELGCS-PDEFAYNAL 355
V+++M+E GC PDE + L
Sbjct: 592 TVYREMQEEGCVFPDEVHFQML 613
>gi|110740599|dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]
Length = 546
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 186/402 (46%), Gaps = 21/402 (5%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
NDW+R+L +WV + +T + YN V+ + + +FD++ L M+ + P+
Sbjct: 1 NDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALA-PDRY 59
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDA---LCEYKHVIEAQELC 124
T+ + + + + A+ K+++ + D V Y NL++ LC+Y I
Sbjct: 60 TYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAIS----I 115
Query: 125 FGENKNVGFS-GLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F K G + LV YN ++ + K + + R +EM++ GV+ + SYS
Sbjct: 116 FSRLKRSGITPDLVA------YNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTL 169
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ + ++ K +A+ ++ EMK+ +D+ N +I G + V A R++ +R+M
Sbjct: 170 LSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDI 229
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE---ILG 300
+P+VV+ NT++++ E EA + M +K +V+TY+ + K E
Sbjct: 230 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATN 289
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L M GI P TY ++ +G+ G L +++K+ G D+ Y ++ A
Sbjct: 290 LVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYE 349
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQS 402
G++ A++ E+ K PRE T L + G E +
Sbjct: 350 RVGLMGHAKRLLHEL--KLPDNIPRETAITILAKAGRTEEAT 389
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 168/382 (43%), Gaps = 44/382 (11%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D+ +A+ F+ ++ T YNS+I++ GK F + LI M + +PN +
Sbjct: 108 DYSKAISIFSRLKR-SGITPDLVAYNSMINVYGKAKLFREARLLIKEMNE-AGVLPNTVS 165
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNL-VDALCEYKHVIEAQELCFGEN 128
+ + YV H EA+ F ++ E +++ CN+ +D + V EA L +
Sbjct: 166 YSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLR 225
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
K +V YN ILR + + +G+ + M ++ + +++ +Y+ + I
Sbjct: 226 KMDIEPNVVS------YNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 279
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ---- 244
K+ + KA L +EM+ +GI+ + + Y+T+I G + +D A +++++R G +
Sbjct: 280 KTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQV 339
Query: 245 ---------------------------PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
P + T I +L + GR EA V + + G
Sbjct: 340 LYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESG 399
Query: 278 CVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
V D+ + C + + ++ +F++M +G P + M+L +G+
Sbjct: 400 EVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKAD 459
Query: 335 VVWKKMEELGCS-PDEFAYNAL 355
V+++M+E GC PDE + L
Sbjct: 460 TVYREMQEEGCVFPDEVHFQML 481
>gi|334182677|ref|NP_001185030.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191659|gb|AEE29780.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 886
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 173/398 (43%), Gaps = 51/398 (12%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
ND+ AL FF W++ F H TY +++ LG+ +F L+ M + PN
Sbjct: 342 NDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRD-GCQPNTV 400
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE 127
T+ + Y A+ +NEAM FN++ E G K D V+YC L+D I A+
Sbjct: 401 TYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLID--------IHAK------ 446
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
+G +++ + ++ M G+ D +YS+ ++ +
Sbjct: 447 ------AGFLDI---------------------AMDMYQRMQAGGLSPDTFTYSVIINCL 479
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
K+G A KL+ EM +G ++V YN ++ + A+++YR+M+ G +P
Sbjct: 480 GKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDK 539
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGL---FDR 304
VT + V+++L G + EA AV EM +K +PD Y K + +
Sbjct: 540 VTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA 599
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID-KG 363
M+ +G+RP + T LL F R + + + + M LG P Y L+ D +
Sbjct: 600 MLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRS 659
Query: 364 MLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
LDM + ++ A + P K+ G DGE
Sbjct: 660 KLDMG--FCGQLMAS--TGHPAHMFLLKMPAAGPDGEN 693
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 113/237 (47%), Gaps = 7/237 (2%)
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKR-GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
N +L+ +M+ +G F+ + ++ G D H+Y+ + + ++ + KL EM
Sbjct: 335 NQVLK---QMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMV 391
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+ G + + V YN +I + G + ++ AM V+ +M+E GC+P VT T+I + + G +
Sbjct: 392 RDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLD 451
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLL 321
A + M G PD TY CL K + LF M++ G P + TY +++
Sbjct: 452 IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMM 511
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+ + +++ M+ G PD+ Y+ +++ L G L+ A EM K
Sbjct: 512 DLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 72/168 (42%), Gaps = 12/168 (7%)
Query: 224 VSEGVDFAMRVYR-------EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
+ E V +R +R ++ +G + N V+K + + G + L P
Sbjct: 301 IVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQP-- 358
Query: 277 GCVPDVITYHCFFRCLEKPRE---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
G D TY L + ++ I L D M+ G +P TY L+ +GR +L
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 334 FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
V+ +M+E GC PD Y L+D G LD+A + M A GLS
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS 466
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 167/357 (46%), Gaps = 23/357 (6%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN++ID + K + +++L M S P+ T+ + + + +A FNK+
Sbjct: 215 YNTIIDSMCKVKLVNEAFDLYSEMVSKGIS-PDVVTYNALISGFCIVGKMKDATDLFNKM 273
Query: 94 DEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI------YN 146
+ V N LVD C+ + + EA KNV L M K I YN
Sbjct: 274 IFENINPNVYTFNILVDGFCKERRLKEA--------KNV----LAMMMKQGIKPDVFTYN 321
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++ + + K + + + +RGV ++HSYSI + CK K +A+ L+KEM
Sbjct: 322 SLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCN 381
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
I DVV YN++I + + +A+++ EM + G +T N+++ LC+N +V +A
Sbjct: 382 NIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKA 441
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRK 323
A+L +M +G PD+ TY L K + +F+ ++ G ++ Y +++
Sbjct: 442 IALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQG 501
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
F G + KMEE GC P+ Y ++ +L DK D A K EM +GL
Sbjct: 502 FCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 132/285 (46%), Gaps = 15/285 (5%)
Query: 102 VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKC 161
++ L+ LC + +A + +K V +NK Y ++ G K+
Sbjct: 143 ITLTTLIKGLCLKGQIHQALQF---HDKVVALG--FHLNKVS-YGTLINGLCKVGQTSAA 196
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
+ +D + V ++ Y+ +D MCK +A LY EM KGI DVV YN +I
Sbjct: 197 LQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISG 256
Query: 222 VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
+ + A ++ +M P+V T N ++ C+ R++EA VLA M K+G PD
Sbjct: 257 FCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPD 316
Query: 282 VITY------HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFV 335
V TY +C + + K + I F+ + + G+ P + +Y +++ F + +
Sbjct: 317 VFTYNSLMDRYCLVKEVNKAKHI---FNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMN 373
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
++K+M PD YN+L+D L G + A K +EM +G+
Sbjct: 374 LFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGV 418
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 135/281 (48%), Gaps = 9/281 (3%)
Query: 102 VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKC 161
V Y ++D++C+ K V EA +L + E + G S V YN ++ G+ +
Sbjct: 213 VMYNTIIDSMCKVKLVNEAFDL-YSEMVSKGISPDVVT-----YNALISGFCIVGKMKDA 266
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
+ + +M + ++++++I +D CK + +A + M K+GIK DV YN+++
Sbjct: 267 TDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDR 326
Query: 222 VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
+ + V+ A ++ + + G P++ + + +I C+ +V EA + EM +PD
Sbjct: 327 YCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPD 386
Query: 282 VITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWK 338
V+TY+ L K +I L L D M + G+ TY +L + + +
Sbjct: 387 VVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLT 446
Query: 339 KMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
KM++ G PD Y LVD L G L+ AR E++ KG
Sbjct: 447 KMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKG 487
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 108/248 (43%), Gaps = 38/248 (15%)
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI--------------------- 186
IL K + + +M+ G+ DL SI ++
Sbjct: 78 ILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMG 137
Query: 187 --------------MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM 232
+C G+ +A++ + ++ G ++ V+Y T+I + A+
Sbjct: 138 YEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAAL 197
Query: 233 RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---F 289
++ R + QP+VV NT+I +C+ V EA+ + +EM KG PDV+TY+ F
Sbjct: 198 QLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGF 257
Query: 290 RCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE 349
+ K ++ LF++MI I P + T+ +L+ F + L+ V M + G PD
Sbjct: 258 CIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDV 317
Query: 350 FAYNALVD 357
F YN+L+D
Sbjct: 318 FTYNSLMD 325
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 8/246 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS++D E + + ++ + + + PN ++ IM + V+EAM F +
Sbjct: 319 TYNSLMDRYCLVKEVNKAKHIFNTISQRGVN-PNIHSYSIMIHGFCKIKKVDEAMNLFKE 377
Query: 93 LD-EFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + D V+Y +L+D LC+ + A +L E + G V +K YN IL
Sbjct: 378 MHCNNIIPDVVTYNSLIDGLCKLGKISYALKLV-DEMHDRG----VPHDKIT-YNSILDA 431
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K K +M G+ D+ +Y+ +D +CK+G+ A +++++ KG +D
Sbjct: 432 LCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILD 491
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V Y +I+ D ++ + +M E GC P+ VT +I L + +A +L
Sbjct: 492 VNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLR 551
Query: 272 EMPKKG 277
EM +G
Sbjct: 552 EMITRG 557
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 87/194 (44%), Gaps = 4/194 (2%)
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+ KS V L+++M+ GI D+V + +I + V ++ +MG +P+
Sbjct: 82 LVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPN 141
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFD 303
V+T T+IK LC G++ +A ++ G + ++Y L K + L L
Sbjct: 142 VITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLR 201
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
R+ ++P + Y ++ + + F ++ +M G SPD YNAL+ G
Sbjct: 202 RVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVG 261
Query: 364 -MLDMARKYDEEMF 376
M D +++ +F
Sbjct: 262 KMKDATDLFNKMIF 275
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 84/182 (46%), Gaps = 3/182 (1%)
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
+ +K K + + ++ ++ S + ++R+M G +V + +I + G+
Sbjct: 63 LHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQ 122
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVM 319
+++VLA++ K G P+VIT + CL+ + + L D+++ G +Y
Sbjct: 123 NPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGT 182
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L+ + G + ++++ P+ YN ++D++ +++ A EM +KG
Sbjct: 183 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 242
Query: 380 LS 381
+S
Sbjct: 243 IS 244
>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
Length = 425
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 158/326 (48%), Gaps = 10/326 (3%)
Query: 59 DNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV-DALCEYKHV 117
D S PN T++ + + V A V AM +K+ + GL+ + CN+V D L + +
Sbjct: 41 DKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLDKMIKTGLEPDTLLCNVVLDGLGKANMM 100
Query: 118 IEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
EA +L F K++G Y +++R + + ++EM++RG
Sbjct: 101 DEACKL-FASMKSMGCPA-----DDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSA 154
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
+Y+ +DI CK+G+ A+ + K+M K + D N++I AV + + A ++
Sbjct: 155 PAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFER 214
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR- 296
M++ G + V+ N ++ + G+V AY + EM +G P+ IT++ CL + +
Sbjct: 215 MKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKY 274
Query: 297 --EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
E + M +G+ P + TY ++ F + G + F ++ ME+ GCS + YN
Sbjct: 275 ASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNL 334
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGL 380
L+DAL+ G AR +M KG+
Sbjct: 335 LIDALVKAGRYQDARDIYFDMKKKGI 360
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 134/299 (44%), Gaps = 17/299 (5%)
Query: 35 NSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLD 94
N V+D LGK D + L MK ++ T+ I+ + EA F++++
Sbjct: 88 NVVLDGLGKANMMDEACKLFASMKSMGCPADDY-TYAILIRSLGRCKRDEEATLLFDEME 146
Query: 95 EFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK---IYNMILR 150
E G +Y N++D C+ + E+ V +++ N N ++
Sbjct: 147 ERGCTPSAPAYTNVIDIYCKAGRI---------ESAMVVLKKMLDKNLAPDDYTLNSLIT 197
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
+ E +E M K GV + S++ +D K+GK A + EM+ +GIK
Sbjct: 198 AVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKP 257
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
+ + +NT+I +G ++ A +V +EMR G P V T +I+ + G + +A+ +
Sbjct: 258 NSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMF 317
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
+M K GC +V+TY+ L K ++ ++ M + GI P T +L + G+
Sbjct: 318 GDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVLQQLAGK 376
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 120/243 (49%), Gaps = 9/243 (3%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+ N ++ + + S K + ++E+DK G + ++Y + + K+G A++L +M
Sbjct: 16 VSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLDKM 75
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
K G++ D + N V+ +G + +D A +++ M+ MGC T +I+ L R
Sbjct: 76 IKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRD 135
Query: 264 REAYAVLAEMPKKGCVP------DVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTY 317
EA + EM ++GC P +VI +C +E +L +M++ + P T
Sbjct: 136 EEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVL---KKMLDKNLAPDDYTL 192
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
L+ R G ++++M++ G + + ++NA++D G + +A ++ +EM A
Sbjct: 193 NSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEA 252
Query: 378 KGL 380
+G+
Sbjct: 253 RGI 255
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 159/344 (46%), Gaps = 13/344 (3%)
Query: 65 PNHATFRIMFKRYVTAHLV-NEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQE 122
P T+ ++ Y + N+ G F + G L DE +Y L+ C + E
Sbjct: 66 PTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITC-CRRGSLYEEAA 124
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
F + K++GF + YN +L + K + E EM+ G + +Y+
Sbjct: 125 AVFEDMKSMGF-----VPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNS 179
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ + G +A++L +M ++GIK+DV Y ++ + + AMRV+ EMR G
Sbjct: 180 LISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAG 239
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREIL 299
C+P++ T N +IK+ G+ E V E+ CVPD++T++ + E+
Sbjct: 240 CKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVS 299
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
G+F M G P+ DTY L+ + R G ++K+M + G +PD YNA++ AL
Sbjct: 300 GVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAAL 359
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQSG 403
G+ + + K EM G+ KP E L+ +G++ G
Sbjct: 360 ARGGLWEQSEKILAEM-QDGM-CKPNELTHCSLLHAYANGKEIG 401
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 138/299 (46%), Gaps = 19/299 (6%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F DTYN++I + FD + + RM D + P+ +T+ + L ++
Sbjct: 310 FVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGIT-PDLSTYNAVLAALARGGLWEQS 368
Query: 87 MGTFNKLDEFGLK-DEVSYCNLVDALCEYKHV----IEAQELCFGENKNVGFSGLVEMNK 141
++ + K +E+++C+L+ A K + A+E+C SG++E +
Sbjct: 369 EKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEIC---------SGVIEPHA 419
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
+ ++L K + + E+ ++G DL + + + I + K ++
Sbjct: 420 VLLKTLVLVNS-KCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILN 478
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
MK+ G + YN+++ SE + + V +E+ G +P +++ NTVI C NG
Sbjct: 479 FMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNG 538
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTY 317
R++EA + +EM + G +PDVITY+ F E + + MI+ G +P +TY
Sbjct: 539 RMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTY 597
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 4/204 (1%)
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
++ ++++ K GK A L + K G + DV AY ++I A + A+ V+++M E
Sbjct: 2 AVIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEE 61
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAE-MPKKGCVPDVITYHCFFRCLEKP---R 296
GC+P+++T N ++ + + G L E M G +PD TY+ C +
Sbjct: 62 EGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYE 121
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
E +F+ M G P TY LL +G+ ++ V ++ME GCSP YN+L+
Sbjct: 122 EAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLI 181
Query: 357 DALIDKGMLDMARKYDEEMFAKGL 380
A G+L+ A + +M +G+
Sbjct: 182 SAYARDGLLEEAMELKNQMVERGI 205
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 125/279 (44%), Gaps = 45/279 (16%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI-------- 219
+ K G D+++Y+ + +G+ +AV ++K+M+++G K ++ YN ++
Sbjct: 24 LHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGM 83
Query: 220 ---RAVGVSEGV-------------------------DFAMRVYREMREMGCQPSVVTCN 251
+ G+ EG+ + A V+ +M+ MG P VT N
Sbjct: 84 PWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYN 143
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIES 308
T++ + ++ R++EA VL EM GC P ++TY+ + E + L ++M+E
Sbjct: 144 TLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVER 203
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
GI+ + TY +L F R G V+++M GC P+ +NAL+ ++G
Sbjct: 204 GIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEM 263
Query: 369 RKYDEEMFAKGLSAKPR----EELGTKLVQGGLDGEQSG 403
K EE+ K P L Q G+D E SG
Sbjct: 264 MKVFEEI--KICCCVPDIVTWNTLLAVFGQNGMDSEVSG 300
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 144/335 (42%), Gaps = 25/335 (7%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN+++D+ GK + ++ M+ N S P+ T+ + Y L+ EAM N+
Sbjct: 141 TYNTLLDVYGKSRRIKEAIEVLREMEVNGCS-PSIVTYNSLISAYARDGLLEEAMELKNQ 199
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVG-------FSGLVEMNKTKI 144
+ E G+K D +Y ++ A + F E + G F+ L++M+
Sbjct: 200 MVERGIKLDVFTYTAMLSGFVRTGKDESAMRV-FEEMRTAGCKPNICTFNALIKMHGN-- 256
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
RG F + + +EE+ V D+ +++ + + ++G + ++KEMK
Sbjct: 257 -----RGKF-----AEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMK 306
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+ G + YNT+I A D AM +Y+ M + G P + T N V+ L G
Sbjct: 307 RVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWE 366
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
++ +LAEM C P+ +T+ +EI L L + + I P L+
Sbjct: 367 QSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLV 426
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
+ L + +++ G SPD NA++
Sbjct: 427 LVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMI 461
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 5/192 (2%)
Query: 82 LVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
L+ EA F +L G ++S N + A+ + ++ K GF+
Sbjct: 434 LLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTP-----S 488
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
YN ++ + + + E +E+ +G+ D+ SY+ + C++G+ +A ++
Sbjct: 489 LATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFS 548
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
EM++ G+ DV+ YNT + + + A+ V M + GC+P+ T N+VI C+
Sbjct: 549 EMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLN 608
Query: 262 RVREAYAVLAEM 273
R +A ++ +
Sbjct: 609 RRDDAIKFISSL 620
>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 172/367 (46%), Gaps = 38/367 (10%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMK-DNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
++ S+I+ +F L+H+MK +N I +F IMFK Y AHL +A+ F+
Sbjct: 67 SFYSLIENFSNSLDFTSLEQLLHQMKCENRVFI--EKSFIIMFKAYGKAHLPQKALDLFH 124
Query: 92 KLD-EFGLKDEVSYCNLVD-----------ALCEYKHVIEAQELCFGENKNVGFSGLVEM 139
++ EF K V N V AL Y HVI++ N+ +GL
Sbjct: 125 RMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSF-----SNIQPNGLS-- 177
Query: 140 NKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKL 199
+N++++ ++ + E + M R V D ++YS M +C G+ +AV L
Sbjct: 178 -----FNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSL 232
Query: 200 YKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCE 259
EM+ +G + VA+N +I A+ + A ++ M GC P+ VT N+++ LC
Sbjct: 233 LDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCL 292
Query: 260 NGRVREAYAVLAEMPKKGCVPDVITYHCFF-------RCLEKPREILGLFDRMIESGIRP 312
G++ +A ++L M CVP+ IT+ R L+ R ++ L E G R
Sbjct: 293 KGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLE----EKGYRG 348
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
+Y L+ + G +WK+M E GC P+ Y+AL+D L +G D A++Y
Sbjct: 349 NEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYL 408
Query: 373 EEMFAKG 379
EM KG
Sbjct: 409 IEMKNKG 415
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 173/410 (42%), Gaps = 38/410 (9%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPS---SIPNHA 68
++AL+ F+ + + H T ++N+V++++ + FDL+ + + D+ S PN
Sbjct: 117 QKALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGL 176
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKL-DEFGLKDEVSYCNLVDALCEYKHVIEAQEL---- 123
+F ++ K V++A+ F + D + D +Y L+ LC + EA L
Sbjct: 177 SFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEM 236
Query: 124 -CFGENKN-VGFSGLVEMNKTK-----------------------IYNMILRGWFKMSWW 158
G N V F+ L+ K YN ++ G
Sbjct: 237 QVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKL 296
Query: 159 GKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTV 218
K M V + ++ +D K G+ V++ +++KG + + +Y+++
Sbjct: 297 DKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSL 356
Query: 219 IRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGC 278
I + + M++++EM E GC+P+ + + +I LC G+ EA L EM KG
Sbjct: 357 ISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGH 416
Query: 279 VPDVITYHC----FFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
P+ TY +F + + IL ++ M ++ Y +L+ + G L+
Sbjct: 417 TPNSFTYSSLMWGYFEAGDIHKAIL-VWKEMTDNDCNHHEVCYSILINGLCKNGKLKEAL 475
Query: 335 VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
+VWK+M G D AY++++ + +++ K +M +P
Sbjct: 476 IVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQP 525
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 137/304 (45%), Gaps = 12/304 (3%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKL-DEFGLKDEVSYCNLVDALCEYKHVIEAQE 122
+PN T+ + +++AM N++ + +++++ LVD ++ ++
Sbjct: 277 VPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVR 336
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ + G+ G Y+ ++ G FK + W+EM ++G + YS
Sbjct: 337 VLVSLEEK-GYRG-----NEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSA 390
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D +C+ GKP +A + EMK KG + Y++++ + + A+ V++EM +
Sbjct: 391 LIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDND 450
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---L 299
C V + +I LC+NG+++EA V +M +G DV+ Y + + +
Sbjct: 451 CNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGM 510
Query: 300 GLFDRMI--ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
LF++M+ ++P + TY +LL F + + M + GC PD + +
Sbjct: 511 KLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLK 570
Query: 358 ALID 361
L D
Sbjct: 571 TLRD 574
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 119/301 (39%), Gaps = 80/301 (26%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS++ L + D + +L++RM N +PN TF + +V + +
Sbjct: 282 TYNSLVHGLCLKGKLDKAMSLLNRMVAN-KCVPNDITFGTLVDGFVKHGRALDGVRVLVS 340
Query: 93 LDEFGLK------------------------------------DEVSYCNLVDALCEYKH 116
L+E G + + + Y L+D LC
Sbjct: 341 LEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGK 400
Query: 117 VIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
EA+E E KN G + + Y+ ++ G+F+ K W+EM
Sbjct: 401 PDEAKEYLI-EMKNKGHTP-----NSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHH 454
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
YSI ++ +CK+GK +A+ ++K+M +GIK+DVVAY+++I ++ V+ M+++
Sbjct: 455 EVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFN 514
Query: 237 EMR-------------------------------------EMGCQPSVVTCNTVIKLLCE 259
+M + GC P +TC+ +K L +
Sbjct: 515 QMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRD 574
Query: 260 N 260
N
Sbjct: 575 N 575
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 160/338 (47%), Gaps = 8/338 (2%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
TT TY +++D L K D + ++ +M + +S P T+ ++ A V EA
Sbjct: 76 TTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNS-PTLKTYTVVIDGLSKAGRVEEARRI 134
Query: 90 FNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
F + G + D Y L+ LC+ EA L N + V T Y +
Sbjct: 135 FVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVT--YTSL 192
Query: 149 LRGWFKMSWWGKCRE-FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
+ G K + R+ F +E +RG + D +Y+ +D +CK G+ + + + EM+ +G
Sbjct: 193 IDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRG 252
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ D V Y +I ++ + A RVYR+M + G S VT N ++ LC+ GRV EAY
Sbjct: 253 YEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAY 312
Query: 268 AVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
A M ++GCV V+TY C E + LF RM++ G P + +Y +++R
Sbjct: 313 ATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGL 372
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
R G L + ++K+ + PD + +NA + L +
Sbjct: 373 CRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQR 410
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 155/359 (43%), Gaps = 22/359 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+ VI+ L + D +++++ R P++ T+ + A V++A K
Sbjct: 9 AFTVVINGLCREKRLDEAFSVLERAV-RAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKK 67
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKT---KIYNMI 148
+DE L V+Y LVD L + + EA + +VE + K Y ++
Sbjct: 68 MDEKKCLPTTVTYTALVDGLLKAGRLDEAMAV---------LEQMVEKGNSPTLKTYTVV 118
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G K + R + +M G D Y+ + +CKSGKP +A LYKE +
Sbjct: 119 IDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKH 178
Query: 209 KM----DVVAYNTVIRAVGVSEGVDFAMRVYR-EMREMGCQPSVVTCNTVIKLLCENGRV 263
DVV Y ++I + + + A +V+ E E G P VT ++I LC+ GRV
Sbjct: 179 HATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRV 238
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVML 320
E EM +G PD +TY K + I ++ +M++SG TY ++
Sbjct: 239 EEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNII 298
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L + G + + + MEE GC Y+AL+D +G + A + M +G
Sbjct: 299 LDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRG 357
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 14/288 (4%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWG 159
D V++ +++ LC K + EA F + +G T YN+ + G K
Sbjct: 6 DMVAFTVVINGLCREKRLDEA----FSVLERAVRAGCEPDYVT--YNVFIDGLCKAERVD 59
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+ ++MD++ + +Y+ +D + K+G+ +A+ + ++M +KG + Y VI
Sbjct: 60 DAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVI 119
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK--- 276
+ + V+ A R++ +M GC+P +IK LC++G+ EAYA+ E +
Sbjct: 120 DGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHH 179
Query: 277 -GCVPDVITYHCFFRCLEKPREIL---GLF-DRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
VPDV+TY L K IL +F D +E G P TY ++ + G +
Sbjct: 180 ATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVE 239
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ +M G PD Y AL+D + M+ A + +M G
Sbjct: 240 EGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSG 287
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 142/311 (45%), Gaps = 33/311 (10%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A A + F+ + F TY S+ID L K + H M+ N P
Sbjct: 197 CKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMR-NRGYEP 255
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQE-- 122
+ T+ + ++ A ++ +A + ++ + G + V+Y ++D LC+ V EA
Sbjct: 256 DAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATF 315
Query: 123 LCFGENKNV-----------GF------SGLVEMNKTKI----------YNMILRGWFKM 155
L E V GF S VE+ + + YN+I+RG +
Sbjct: 316 LAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRA 375
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS-GKPWKAVKLYKEMKKKGIKMDVVA 214
K ++E++ +R + D+++++ ++ +C+ V+L++ M +G ++ +
Sbjct: 376 GKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHS 435
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
Y+ ++ + + G++ A+ ++REM G P VV NT+I+ LC GRV EA V E+
Sbjct: 436 YSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELE 495
Query: 275 KKGCVPDVITY 285
++ PD +Y
Sbjct: 496 RRS-APDAWSY 505
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPRE 297
M C P +V VI LC R+ EA++VL + GC PD +TY+ F L E+ +
Sbjct: 1 MPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDD 60
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
L +M E P TY L+ + G L V ++M E G SP Y ++D
Sbjct: 61 AFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVID 120
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
L G ++ AR+ +M G +P + T L++G
Sbjct: 121 GLSKAGRVEEARRIFVDMLGNG--CRPDAFVYTALIKG 156
>gi|147865347|emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]
Length = 561
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 173/385 (44%), Gaps = 18/385 (4%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILG--KFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
FFNW DTYN +I LG KF EF + ++ M S PN+ T I+
Sbjct: 152 FFNWAVKQPTIPKDVDTYNVIIKALGRRKFIEFXVX--VLKDMHIQGIS-PNYETLSIVM 208
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGF 133
++ A V++A+ F L+EFG K + N L+ LC+ HV A L F K
Sbjct: 209 DSFIKARQVSKAIEMFRNLEEFGGKCDTESLNVLLQCLCQRSHV-GAANLFFNAMK---- 263
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
G + N YN+I+ GW K G+ + M G + ++S ++ + ++G+
Sbjct: 264 -GGIPFN-CMTYNIIIGGWSKYGKIGEMERCLKAMVADGFSPNCLTFSHLIEGLGRAGRI 321
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
AV+++ M++ G + YN +I + D ++ Y M C P++ T +
Sbjct: 322 DDAVEVFHHMEETGCVPNACVYNALISNFISTRDFDECLKYYNFMVSSNCDPNMDTYTKL 381
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGI 310
I + +V +A +L EM +G +P F L + P + ++ + + G
Sbjct: 382 IVAFLKARKVADALEMLDEMVGRGMIPTTGAITSFIEPLCQYGPPHAAMMIYKKARKVGC 441
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
R + Y +LL + R+G + +W +M+E G S D Y +++ L + G LD A
Sbjct: 442 RISLSAYKLLLMRLSRFGKCGMLLNLWDEMQESGYSSDTEVYEYVINGLCNIGQLDTAVL 501
Query: 371 YDEEMFAKGL--SAKPREELGTKLV 393
EE KG S R +L KL+
Sbjct: 502 VMEESLXKGFCPSRLIRSKLNNKLL 526
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 168/356 (47%), Gaps = 15/356 (4%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
+ YN++ID L K+ ++ L M S + T+ + + A + EA+G
Sbjct: 199 VEMYNTIIDALCKYQLVSEAYGLFSEMTAKGIS-ADVVTYTTLIYGFCIASKLKEAIGLL 257
Query: 91 NKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI--YNM 147
N++ + V +Y LVDALC+ V EA KNV L K + Y+
Sbjct: 258 NEMVLKTINPNVYTYNILVDALCKEGKVKEA--------KNVLAVMLKACVKPDVITYST 309
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++ G+F + K + + M GV D+HSY+I ++ CK+ +A+ L+KEM +K
Sbjct: 310 LMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKN 369
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ +V Y+++I + S + + + EMR+ G +V+T N++I LC+NG + A
Sbjct: 370 MVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAI 429
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKF 324
A+ +M +G P T+ L K ++ F ++ G + Y +++
Sbjct: 430 ALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGH 489
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ G L + KMEE GC P+ ++ +++AL K D A K +M +GL
Sbjct: 490 CKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 155/357 (43%), Gaps = 19/357 (5%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
+N ++D K + + +L HR++ P+ T I+ + + K+
Sbjct: 62 FNKILDSFAKIKHYSTAVSLSHRLELKGIQ-PDLITLNILINCFCHMGQITFGFSVLAKI 120
Query: 94 DEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI----YNMI 148
+ G + +++ L+ LC V NK + F + K Y +
Sbjct: 121 LKRGYQPHTITFTTLIKGLCLKGQV----------NKALHFHDKLLAQGIKFDQVSYGTL 170
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G K+ + ++D R ++ Y+ +D +CK +A L+ EM KGI
Sbjct: 171 INGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGI 230
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
DVV Y T+I ++ + A+ + EM P+V T N ++ LC+ G+V+EA
Sbjct: 231 SADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKN 290
Query: 269 VLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
VLA M K PDVITY + + + ++ +F+ M G+ P + +Y +L+ F
Sbjct: 291 VLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFC 350
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ + ++K+M + P Y++L+D L G + +EM +G+ A
Sbjct: 351 KNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPA 407
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 85/174 (48%), Gaps = 3/174 (1%)
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
++ +N ++ + + A+ + + G QP ++T N +I C G++ ++VLA
Sbjct: 59 IIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118
Query: 272 EMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
++ K+G P IT+ + CL+ + + L D+++ GI+ +Y L+ + G
Sbjct: 119 KILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIG 178
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
R + +K++ P+ YN ++DAL ++ A EM AKG+SA
Sbjct: 179 DTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISA 232
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 177/411 (43%), Gaps = 47/411 (11%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D +RA E + T TY + I L K F ++W LI + + NH
Sbjct: 225 DIRRASEILGKIYMSGE-TPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHC- 282
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGEN 128
F + +++EA F ++ G L D SY L+D C V +A E+ F E
Sbjct: 283 FNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEV-FKEM 341
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
+N G + Y++++ G+ K K E +EEM G++ D++SYSI +D C
Sbjct: 342 RNSGI-----LPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFC 396
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
+ G A+K ++EM Y ++I+ S+ A++ +R M+++G P +
Sbjct: 397 RKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTI 456
Query: 249 TCNTVIKLLC----------------ENG-------------RV------REAYAVLAEM 273
CN ++ + C ENG R+ +A +L M
Sbjct: 457 ACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVM 516
Query: 274 PKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
K+ +PDV+ Y C K + + LF +M + GI + TY +L+ F +
Sbjct: 517 LKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKM 576
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ ++K M+E PD+ AY +LV + G + AR +EM +G S
Sbjct: 577 DVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCS 627
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 158/356 (44%), Gaps = 16/356 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+Y+ +ID + + D + M N S P+ + + K Y + A+ F
Sbjct: 387 SYSILIDGFCRKGDMDSAIKFWEEMTSNNFS-PSAFNYCSLIKGYYKSKQFANALKEFRI 445
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELC--FGENKNVGFSGLVEMNKTKIYNMIL 149
+ + G+ + CN ++ C +A L F EN V N YN +
Sbjct: 446 MQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENG-------VHFNPYS-YNEFI 497
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
+ S K + M KR V+ D+ +YS + K KAV L+ +M K GI
Sbjct: 498 HRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGIT 557
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
+V Y +I +D A R+++ M+E P + +++ C G + A A+
Sbjct: 558 FNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARAL 617
Query: 270 LAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
EM ++GC P+V+TY CF + L K + L+++M E G+ P Y ML+ F
Sbjct: 618 FDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCN 677
Query: 327 WGFLRPVFVVWKKMEELG-CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G + ++ +M++ G C+P+ Y L+++ I D A K EEM AKGLS
Sbjct: 678 TGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLS 733
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 109/243 (44%), Gaps = 3/243 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y ++G K+ +G + + ++ + H ++ + +C+ G +A +++KEMK
Sbjct: 248 YGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMK 307
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
GI DV +Y+ +I VD A V++EMR G P++ + + +I C+ GRV
Sbjct: 308 NSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVD 367
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
+A V EM G +PDV +Y + ++ + ++ M + P Y L+
Sbjct: 368 KALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLI 427
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ + + ++ M++LG PD A N ++ K + A E+ G+
Sbjct: 428 KGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVH 487
Query: 382 AKP 384
P
Sbjct: 488 FNP 490
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 131/300 (43%), Gaps = 16/300 (5%)
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELC 124
++ F ++ K + + ++ A F + + G++ + CN L+ L E V + L
Sbjct: 135 SNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLF 194
Query: 125 -----FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
FG N+ T + N RG + E ++ G ++ +
Sbjct: 195 EVLIKFGPRPNIH-------TYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVT 247
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y Y+ +CK G A +L + + +K ++ +N VI + +D A V++EM+
Sbjct: 248 YGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMK 307
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPR 296
G P V + + +I C GRV +A V EM G +P++ +Y C E +
Sbjct: 308 NSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVD 367
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
+ L +F+ M SGI P + +Y +L+ F R G + W++M SP F Y +L+
Sbjct: 368 KALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLI 427
>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
Length = 455
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 164/333 (49%), Gaps = 11/333 (3%)
Query: 52 NLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDA 110
+L++ M N S PNH F I F Y ++++AM FNK+ + GL D VSY L+DA
Sbjct: 16 DLLNLMVANGIS-PNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDA 74
Query: 111 LCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDK 170
LC+ V +A E+ F + N G + + + + +Y G + W K E + EM
Sbjct: 75 LCKLGRVDDA-EVKFNQMINEGVTPNIVVFSSLVY-----GLCSIDKWEKVEELFFEMLN 128
Query: 171 RGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF 230
G+ ++ ++ + +CK G+ + +L ++ G++ DV++YNT+I ++ +D
Sbjct: 129 VGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDE 188
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR 290
A ++ M +G +P+ + NT++ C+ GR+ AY++ +M G P V+TY+
Sbjct: 189 ASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILH 248
Query: 291 CLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
L + + E L+ MI SG + + TY +L + + F +++ + G
Sbjct: 249 GLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQL 308
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + ++ AL+ G + A + A GL
Sbjct: 309 NIITFTIMIGALLKGGRKEDAMDLFAAIPANGL 341
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 134/321 (41%), Gaps = 49/321 (15%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PN F + V E + ++ G++ D +SY L+D C + EA +L
Sbjct: 133 PNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKL 192
Query: 124 CFGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
G+V + + YN +L G+ K + +M G+ + +Y
Sbjct: 193 ---------LEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTY 243
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ + + ++ + +A +LY M G K + YNT++ + S VD A ++++ +
Sbjct: 244 NTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCS 303
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG 300
G Q +++T +I L + GR +A + A +P G VPDV+TY
Sbjct: 304 KGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRV------------- 350
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+ + +IE G + D+ ++ ME+ G +P+ NALV L+
Sbjct: 351 VAENLIEEGSLEEFDS-------------------LFSAMEKNGTAPNSQMLNALVRRLL 391
Query: 361 DKGMLDMARKY----DEEMFA 377
+G + A Y DE F+
Sbjct: 392 HRGDISRAGAYLSKLDERNFS 412
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 116/273 (42%), Gaps = 44/273 (16%)
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
+L G+ + + M G+ + H ++I+ K G KA+ ++ +M++ G
Sbjct: 1 MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60
Query: 208 IKMDVVAYNTVIRAV---------------GVSEGVD-----FAMRVYR----------- 236
+ D V+Y +I A+ ++EGV F+ VY
Sbjct: 61 LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVE 120
Query: 237 ----EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------H 286
EM +G P++V NT++ LC+ GRV E ++ + G PDVI+Y H
Sbjct: 121 ELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGH 180
Query: 287 CFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
C +++ ++L + M+ G++P +Y LL + + G + + +++KM G +
Sbjct: 181 CLAGTIDEASKLL---EGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGIT 237
Query: 347 PDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
P YN ++ L A++ M G
Sbjct: 238 PGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 270
>gi|15221893|ref|NP_173324.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42571539|ref|NP_973860.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75151479|sp|Q8GYP6.1|PPR49_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18900
gi|26450017|dbj|BAC42129.1| unknown protein [Arabidopsis thaliana]
gi|28827402|gb|AAO50545.1| unknown protein [Arabidopsis thaliana]
gi|332191657|gb|AEE29778.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191658|gb|AEE29779.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 173/398 (43%), Gaps = 51/398 (12%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
ND+ AL FF W++ F H TY +++ LG+ +F L+ M + PN
Sbjct: 342 NDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRD-GCQPNTV 400
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE 127
T+ + Y A+ +NEAM FN++ E G K D V+YC L+D I A+
Sbjct: 401 TYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLID--------IHAK------ 446
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
+G +++ + ++ M G+ D +YS+ ++ +
Sbjct: 447 ------AGFLDI---------------------AMDMYQRMQAGGLSPDTFTYSVIINCL 479
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
K+G A KL+ EM +G ++V YN ++ + A+++YR+M+ G +P
Sbjct: 480 GKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDK 539
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGL---FDR 304
VT + V+++L G + EA AV EM +K +PD Y K + +
Sbjct: 540 VTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA 599
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID-KG 363
M+ +G+RP + T LL F R + + + + M LG P Y L+ D +
Sbjct: 600 MLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRS 659
Query: 364 MLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
LDM + ++ A + P K+ G DGE
Sbjct: 660 KLDMG--FCGQLMAS--TGHPAHMFLLKMPAAGPDGEN 693
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 113/237 (47%), Gaps = 7/237 (2%)
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKR-GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
N +L+ +M+ +G F+ + ++ G D H+Y+ + + ++ + KL EM
Sbjct: 335 NQVLK---QMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMV 391
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+ G + + V YN +I + G + ++ AM V+ +M+E GC+P VT T+I + + G +
Sbjct: 392 RDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLD 451
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLL 321
A + M G PD TY CL K + LF M++ G P + TY +++
Sbjct: 452 IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMM 511
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+ + +++ M+ G PD+ Y+ +++ L G L+ A EM K
Sbjct: 512 DLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 72/168 (42%), Gaps = 12/168 (7%)
Query: 224 VSEGVDFAMRVYR-------EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
+ E V +R +R ++ +G + N V+K + + G + L P
Sbjct: 301 IVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQP-- 358
Query: 277 GCVPDVITYHCFFRCLEKPRE---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
G D TY L + ++ I L D M+ G +P TY L+ +GR +L
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 334 FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
V+ +M+E GC PD Y L+D G LD+A + M A GLS
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS 466
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 164/357 (45%), Gaps = 45/357 (12%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQE 122
+P+ +F + + +++A+ F + +FGL D V Y L+ C +++EA +
Sbjct: 255 VPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALK 314
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ + G V YN IL G K + ++EM +RG + D ++++
Sbjct: 315 I----RDEMLEQGCVL--DVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTT 368
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA---VGVSEG------------ 227
+ C+ G KA+ L+ M ++ IK D+VAYNT+I VG E
Sbjct: 369 LIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRK 428
Query: 228 --------------------VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
V A R++ M E G +P++VTCNTVIK C +G +A
Sbjct: 429 IFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKAD 488
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLF---DRMIESGIRPKMDTYVMLLRKF 324
L M KG PD I+Y+ + + F ++M + G+ P + TY +++ F
Sbjct: 489 EFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGF 548
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
R G ++ +V +KM E G +PD Y AL++ + + L+ A ++ +EM +G +
Sbjct: 549 CRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFA 605
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 172/391 (43%), Gaps = 52/391 (13%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T N +++ L K +FD + + M+ N + T+ + Y L+ EA N
Sbjct: 120 TLNIMVNALCKDGKFDDVKSFLSEMEGN-GIYADMVTYNTLIGAYCREGLLEEAFEIMNS 178
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + GLK + +Y +++ LC+ A+ + E N+G S T YN +L
Sbjct: 179 MADKGLKPSLFTYNAIINGLCKKGRYARAKGILI-EMLNIGLSP-----DTTTYNTLLVE 232
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYS------------------------------ 181
+ + + +E + EM ++GVV DL S+S
Sbjct: 233 SCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPD 292
Query: 182 --IYMDIM---CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
IY +M C++G +A+K+ EM ++G +DV+AYNT++ + + + A +++
Sbjct: 293 NVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFD 352
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFR 290
EM E G P T T+I C++G + +A ++ M ++ PD++ Y+ C
Sbjct: 353 EMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVG 412
Query: 291 CLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF 350
+EK E L+D MI I P TY +L+ + G + F +W M E G P
Sbjct: 413 EMEKASE---LWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLV 469
Query: 351 AYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
N ++ G A ++ M AKG++
Sbjct: 470 TCNTVIKGYCRSGDSSKADEFLGRMIAKGVA 500
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 111/240 (46%), Gaps = 9/240 (3%)
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N +L G K+ W E E+ + G+ ++++ +I ++ +CK GK EM+
Sbjct: 87 NSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEG 146
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
GI D+V YNT+I A ++ A + M + G +PS+ T N +I LC+ GR
Sbjct: 147 NGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYAR 206
Query: 266 AYAVLAEMPKKGCVPDVITYH------CFFRCLEKPREILGLFDRMIESGIRPKMDTYVM 319
A +L EM G PD TY+ C + +EI G M+ G+ P + ++
Sbjct: 207 AKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFG---EMLRQGVVPDLVSFSS 263
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L+ F R L V ++ M++ G PD Y L+ G + A K +EM +G
Sbjct: 264 LIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQG 323
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 10/254 (3%)
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQ 121
++P+ TF + + + +A+ F + + +K D V+Y L+D C+ + +A
Sbjct: 359 ALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKAS 418
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
EL G F + Y +++ + + + W+ M ++G+ L + +
Sbjct: 419 ELWDGMISRKIFPNHIT------YGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCN 472
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+ C+SG KA + M KG+ D ++YNT+I + +D A +M +
Sbjct: 473 TVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKE 532
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR---CLEKPREI 298
G P ++T N V+ C GR++EA VL +M +KG PD TY + E
Sbjct: 533 GLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEA 592
Query: 299 LGLFDRMIESGIRP 312
D M++ G P
Sbjct: 593 FRFHDEMLQRGFAP 606
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 101/201 (50%), Gaps = 15/201 (7%)
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
++ K + + ++ ++ KG + + A N+++ + + V+ A V+RE+ G + +V
Sbjct: 60 QARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVY 119
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREILGLF 302
T N ++ LC++G+ + + L+EM G D++TY +C LE+ EI+
Sbjct: 120 TLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIM--- 176
Query: 303 DRMIESGIRPKMDTYVMLLR---KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ M + G++P + TY ++ K GR+ + + + +M +G SPD YN L+
Sbjct: 177 NSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI---EMLNIGLSPDTTTYNTLLVES 233
Query: 360 IDKGMLDMARKYDEEMFAKGL 380
+ A++ EM +G+
Sbjct: 234 CRRDNFSEAKEIFGEMLRQGV 254
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 108/244 (44%), Gaps = 9/244 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + +AL F + T + YN++ID K E + + L M + P
Sbjct: 374 CQDGNMTKALSLFGTM-TQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMI-SRKIFP 431
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELC 124
NH T+ I+ Y + V+EA ++ + E G+K + CN ++ C +A E
Sbjct: 432 NHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEF- 490
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
G G + YN ++ G+ + K + +M+K G++ D+ +Y++ M
Sbjct: 491 LGRMIAKGVAP-----DHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVM 545
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ C+ G+ +A + ++M +KGI D Y +I + ++ A R + EM + G
Sbjct: 546 NGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFA 605
Query: 245 PSVV 248
P V
Sbjct: 606 PDDV 609
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 164/366 (44%), Gaps = 10/366 (2%)
Query: 15 LEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
++FF W ++ H T TY ++I L ++ W +I M +P + +
Sbjct: 107 MQFFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVI 166
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGF 133
+ A ++ +A+ F ++ + +Y +++ L + EL + E N G
Sbjct: 167 RMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHEL-YNEMSNEGH 225
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
T Y+ ++ + K+ EM + G+ Y++ + + K
Sbjct: 226 C----QPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNV 281
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
A+ L++EM+ + DV Y +IR +G + +D A Y EM+ GC+P V N +
Sbjct: 282 HGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNM 341
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL----EKPREILGLFDRMIESG 309
I L + GR+ + + EM C+P+V+TY+ + L + E+ F+RM SG
Sbjct: 342 INFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSG 401
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
I P TY +L+ F + + ++ ++M+E G P AY +L+DAL D+A
Sbjct: 402 ISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLAC 461
Query: 370 KYDEEM 375
+ +E+
Sbjct: 462 ELFQEL 467
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 178/408 (43%), Gaps = 35/408 (8%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+ +++ E +N + + H T TY+++I K D + L++ MK+N P
Sbjct: 206 HEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQ-PT 264
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEA----- 120
+ ++ + V+ A+ F ++ + +V +Y L+ L + + EA
Sbjct: 265 AKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYH 324
Query: 121 ---QELCFGE----NKNVGFSG-----------LVEMNKTK------IYNMILRGWFKM- 155
+E C + N + F G EM + YN I++ F+
Sbjct: 325 EMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESK 384
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
S + ++E M G+ +YSI +D CK+ + KA+ L +EM +KG AY
Sbjct: 385 SRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAY 444
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
++I A+G ++ D A +++E++E S +IK L + GR+ +A + EM K
Sbjct: 445 CSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSK 504
Query: 276 KGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
GC P+V Y+ L + E L +M E G P +++Y ++L + G
Sbjct: 505 LGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHR 564
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ M+ PD +YN ++ AL GM + A + +EM A G
Sbjct: 565 AMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGF 612
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 147/331 (44%), Gaps = 10/331 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +I LGK D +++ H M+ P+ M A +++ + F +
Sbjct: 302 TYTELIRGLGKAGRIDEAYHFYHEMQREGCK-PDTVVMNNMINFLGKAGRLDDGLKLFEE 360
Query: 93 LD-EFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + + V+Y ++ AL E K + F K G S Y++++ G
Sbjct: 361 MGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISP-----SPFTYSILIDG 415
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K + K EEMD++G +Y +D + K+ + A +L++E+K+
Sbjct: 416 FCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSS 475
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
Y +I+ +G + +D A+ ++ EM ++GC P+V N ++ L + EA +
Sbjct: 476 ARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMR 535
Query: 272 EMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+M + GC+PD+ +Y+ L K P + + M S I+P +Y +L G
Sbjct: 536 KMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAG 595
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ K+M LG D Y+++++A+
Sbjct: 596 MFEEAAELMKEMNALGFEYDLITYSSILEAI 626
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 124/276 (44%), Gaps = 19/276 (6%)
Query: 26 HFTHTTDTYNSVIDILGKFFEFD------LSWNLIHRMKDNPSSIPNHATFRIMFKRYVT 79
H TYN++I L FE SW RMK + S P+ T+ I+ +
Sbjct: 365 HCIPNVVTYNTIIKAL---FESKSRVSEVFSW--FERMKGSGIS-PSPFTYSILIDGFCK 418
Query: 80 AHLVNEAMGTFNKLDEFGLKD-EVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVE 138
+ + +AM ++DE G +YC+L+DAL + K A EL +N G S
Sbjct: 419 TNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSS--- 475
Query: 139 MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK 198
++Y ++++ K ++EM K G ++++Y+ M + ++ +A+
Sbjct: 476 ---ARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALT 532
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
++M++ G D+ +YN ++ + + G AM + M+ +P V+ NTV+ L
Sbjct: 533 TMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALS 592
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
G EA ++ EM G D+ITY + K
Sbjct: 593 HAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGK 628
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 103/213 (48%), Gaps = 14/213 (6%)
Query: 178 HSYSIYM------DIMCKSGKPWKAVKLYKEMKKKGI-KMDVVAYNTVIRAVGVSEGVDF 230
H S YM +++ + G+ WK ++ EM + I + + + VIR +G ++ +
Sbjct: 121 HDTSTYMALIHCLELVEQYGEMWKMIQ---EMVRSPICVVTPMELSQVIRMLGNAKMIGK 177
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG-CVPDVITYHCFF 289
A+ ++ +++ CQP+ N++I +L G+ + + + EM +G C PD +TY
Sbjct: 178 AITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALI 237
Query: 290 RC---LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
L + + L + M E+G++P Y M++ F + + ++++M + C
Sbjct: 238 SAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCR 297
Query: 347 PDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
PD F Y L+ L G +D A + EM +G
Sbjct: 298 PDVFTYTELIRGLGKAGRIDEAYHFYHEMQREG 330
>gi|297745567|emb|CBI40732.3| unnamed protein product [Vitis vinifera]
Length = 520
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 173/387 (44%), Gaps = 22/387 (5%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILG--KFFEFDLSWNLIHRMKDN--PSSIPNHATFRI 72
FFNW DTYN +I LG KF EF ++ +KD PN+ T I
Sbjct: 111 FFNWAVKQPTIPKDVDTYNVIIKALGRRKFIEF-----VVKVLKDMHIQGISPNYETLSI 165
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNV 131
+ ++ A V++A+ F L+EFG K + N L+ LC+ HV A L F K
Sbjct: 166 VMDSFIKARQVSKAIEMFRNLEEFGGKCDTESLNVLLQCLCQRSHV-GAANLFFNAMK-- 222
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
G + N YN+I+ GW K G+ + M G + ++S ++ + ++G
Sbjct: 223 ---GGIPFN-CMTYNIIIGGWSKYGKIGEMERCLKAMVADGFSPNCLTFSHLIEGLGRAG 278
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
+ AV+++ M++ G + YN +I + D ++ Y M C P++ T
Sbjct: 279 RIDDAVEVFHHMEETGCVPNACVYNALISNFISTRDFDECLKYYNFMVSSNCDPNMDTYT 338
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIES 308
+I + +V +A +L EM +G +P F L + P + ++ + +
Sbjct: 339 KLIVAFLKARKVADALEMLDEMVGRGMIPTTGAITSFIEPLCQYGPPHAAMMIYKKARKV 398
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G R + Y +LL + R+G + +W +M+E G S D Y +++ L + G LD A
Sbjct: 399 GCRISLSAYKLLLMRLSRFGKCGMLLNLWDEMQESGYSSDTEVYEYVINGLCNIGQLDTA 458
Query: 369 RKYDEEMFAKGL--SAKPREELGTKLV 393
EE KG S R +L KL+
Sbjct: 459 VLVMEESLHKGFCPSRLIRSKLNNKLL 485
>gi|449437378|ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Cucumis sativus]
gi|449503560|ref|XP_004162063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Cucumis sativus]
Length = 615
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 154/315 (48%), Gaps = 13/315 (4%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLI-HRMKDNPSS-IPNHATFRIMF 74
F W F + +N +I++L K EFD +W+LI R++ S + + F I+
Sbjct: 140 LFLWAAKKSGFRPSAALFNRLINVLAKSREFDSAWSLITSRLRGGEESFLVSVEVFVILI 199
Query: 75 KRYVTAHLVNEAMGTF----NKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKN 130
+RY A +V A+ T+ N G E + L+D+LC+ HV A E F +
Sbjct: 200 RRYARAGMVQPAIRTYEFACNLETISGTGSEGLFEILLDSLCKEGHVRVASEY-FNRKRE 258
Query: 131 VGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS 190
+G S + + YN+++ GWF+ + W EM K + + +Y ++ C+
Sbjct: 259 MGSSFEPSI---RAYNILINGWFRSRKLKHAQRLWFEMKKNKISPTVVTYGTLIEGYCRM 315
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTC 250
A++L EM+++GI+ + + YN ++ A+G + A+ + + P++ T
Sbjct: 316 RSVEIAIELVDEMRREGIEPNAIVYNPIVDALGEAGRFKEALGMMERFMVLEQGPTISTY 375
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE---KPREILGLFDRMIE 307
N+++K C+ G + A +L M +G P TY+ FFR K E + L+++MIE
Sbjct: 376 NSLVKGYCKAGDLSGASKILKMMIGRGFTPTPTTYNYFFRFFSKYGKIEESMSLYNKMIE 435
Query: 308 SGIRPKMDTYVMLLR 322
SG P TY +LL+
Sbjct: 436 SGYAPDKLTYHLLLK 450
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 123/282 (43%), Gaps = 9/282 (3%)
Query: 6 CYANDWKRALEFFNWV-ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C + A E+FN E F + YN +I+ + + + L MK N S
Sbjct: 241 CKEGHVRVASEYFNRKREMGSSFEPSIRAYNILINGWFRSRKLKHAQRLWFEMKKNKIS- 299
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P T+ + + Y V A+ +++ G++ + + Y +VDAL E EA L
Sbjct: 300 PTVVTYGTLIEGYCRMRSVEIAIELVDEMRREGIEPNAIVYNPIVDALGEAGRFKEA--L 357
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
E F L + YN +++G+ K + + M RG +Y+ +
Sbjct: 358 GMMER----FMVLEQGPTISTYNSLVKGYCKAGDLSGASKILKMMIGRGFTPTPTTYNYF 413
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
K GK +++ LY +M + G D + Y+ +++ + E ++ A++V EM+ G
Sbjct: 414 FRFFSKYGKIEESMSLYNKMIESGYAPDKLTYHLLLKMLCEEERLNLAVQVCNEMKARGF 473
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
+ T ++ LLC+ + EA+A M +G VP +T+
Sbjct: 474 DMDLATSTMLMHLLCKMHKFEEAFAEFEHMIHRGIVPQYLTF 515
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 66/165 (40%), Gaps = 11/165 (6%)
Query: 228 VDFAMRVYREMREMGC--QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
V A + REMG +PS+ N +I + +++ A + EM K P V+TY
Sbjct: 246 VRVASEYFNRKREMGSSFEPSIRAYNILINGWFRSRKLKHAQRLWFEMKKNKISPTVVTY 305
Query: 286 ------HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
+C R +E E L D M GI P Y ++ G G + + ++
Sbjct: 306 GTLIEGYCRMRSVEIAIE---LVDEMRREGIEPNAIVYNPIVDALGEAGRFKEALGMMER 362
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
L P YN+LV G L A K + M +G + P
Sbjct: 363 FMVLEQGPTISTYNSLVKGYCKAGDLSGASKILKMMIGRGFTPTP 407
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 154/351 (43%), Gaps = 43/351 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN+++ + E D + ++ M++ ++ PN TF M A + A F++
Sbjct: 189 TYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDE 248
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ GL +V YN +L G+
Sbjct: 249 MVREGLAPDVVS----------------------------------------YNTLLSGY 268
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K+ + + EM +RG+V D+ +++ + CK+G +AV L +M+++G++M+
Sbjct: 269 CKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNE 328
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V + +I +D A+ EMR+ G QPSVV N +I C+ GR+ A ++ E
Sbjct: 329 VTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIRE 388
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREILGLF---DRMIESGIRPKMDTYVMLLRKFGRWGF 329
M K PDV+TY K + F +M++ G+ P TY L+R
Sbjct: 389 MEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKR 448
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
L +++ M +LG PDEF Y L+D +G ++ A +EM KG+
Sbjct: 449 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGV 499
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 121/243 (49%), Gaps = 11/243 (4%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN +L S R F M + GV ++++Y+I + +C G+ +AV + +M+
Sbjct: 121 YNAVLLALSDASLP-SARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMR 179
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG-CQPSVVTCNTVIKLLCENGRV 263
G + V YNT++ A + +D A RV MRE G +P++VT N+++ LC+ GR+
Sbjct: 180 GAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRM 239
Query: 264 REAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPKMDTY 317
A V EM ++G PDV++Y +C CL E L +F M + G+ P + T+
Sbjct: 240 EGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLH---ESLAVFSEMTQRGLVPDVVTF 296
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
L+ + G L + +M E G +E + AL+D KG LD A EEM
Sbjct: 297 TSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRK 356
Query: 378 KGL 380
G+
Sbjct: 357 CGI 359
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 158/351 (45%), Gaps = 27/351 (7%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+P+ TF + A + +A+ ++ E GL+ +EV++ L+D C+ K ++
Sbjct: 290 VPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCK-KGFLDDAL 348
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L E + G V YN ++ G+ K+ RE EM+ + V D+ +YS
Sbjct: 349 LAVEEMRKCGIQPSV-----VCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ CK G A +L ++M KKG+ D + Y+++IR + + ++ A ++ M ++G
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP------- 295
QP T T+I C+ G V +A ++ EM +KG +PDV+TY L K
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 523
Query: 296 REILGL-----------FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
R + L +D ++ + + + V LL+ F G ++ V++ M +
Sbjct: 524 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 583
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
D Y+ L+ G + A + ++M G S P LV+G
Sbjct: 584 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFS--PNSTSTISLVRG 632
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 109/228 (47%), Gaps = 7/228 (3%)
Query: 172 GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFA 231
G + +Y+ + + + P A + M + G+ +V YN ++RA+ ++ A
Sbjct: 113 GYAPSVPAYNAVLLALSDASLP-SARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV-PDVITYHCFFR 290
+ V +MR GC P+ VT NT++ C G + A V++ M ++G P+++T++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231
Query: 291 CLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
L K + G +FD M+ G+ P + +Y LL + + G L V+ +M + G P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
D + +L+ A G L+ A +M +GL + E T L+ G
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGL--RMNEVTFTALIDG 337
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 177/387 (45%), Gaps = 20/387 (5%)
Query: 13 RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM--KDNPSSIPNHATF 70
+A EFFNW + F H + +Y ++DILG+ +++ N + + + N S
Sbjct: 42 KAFEFFNWASRN-GFAHDSRSYFMMLDILGRNGNLNIARNFLFSIERRSNGSVKIEDRFC 100
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKN 130
+ + Y A L NEA+ F+ + G+ V N + + + F E
Sbjct: 101 NTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEM-- 158
Query: 131 VGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS 190
G G+ T +N+++RG+ K S + F++EM + D+ +Y+ +D +C++
Sbjct: 159 CGTYGVTP--DTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRA 216
Query: 191 GKPWKAVKLYKEM--KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
GK A + K M K K + DVV Y T++R + + +D A+ V+ EM G +P+ +
Sbjct: 217 GKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDI 276
Query: 249 TCNTVIKLLCENGRVREAYAVLA-EMPKKGCVPDVITYHCFFRC---LEKPREILGLFDR 304
T NT+IK LCE + + +L + +G VPD TY+ E L +F +
Sbjct: 277 TYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKK 336
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL-------GCSPDEFAYNALVD 357
M E ++P TY +L+R + G ++ K+ + GC+P AYN + D
Sbjct: 337 MKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFD 396
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKP 384
L G A + ++ KG P
Sbjct: 397 FLCKNGKTHKAERVFRQLMKKGTQDPP 423
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 172/389 (44%), Gaps = 24/389 (6%)
Query: 4 LSCYAND--WKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
L Y N + A++ F+ +++ + + T+NS++ IL K +++ ++ M
Sbjct: 104 LRSYGNAGLFNEAIKLFSLMKSS-GVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTY 162
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA 120
P+ TF I+ + + +V+E F ++ F + D V+Y LVD LC V A
Sbjct: 163 GVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIA 222
Query: 121 QELCFGENKNVGFSGLVEMNKTKI-YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
+ G K + +++ + Y ++RG+ + +EEM RG+ + +
Sbjct: 223 HNVVKGMVKK-----MKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDIT 277
Query: 180 YSIYMDIMCKSGKPWKAVK--LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
Y+ + +C+ K + +K L + +G D YNT++ A + D A++++++
Sbjct: 278 YNTLIKGLCEVQK-FDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKK 336
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK-------GCVPDVITYHCFFR 290
M+E+ QP T + +I+ LC+ G A + ++ + GC P V Y+ F
Sbjct: 337 MKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFD 396
Query: 291 CL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
L K + +F ++++ G + +Y L+ + G + + M P
Sbjct: 397 FLCKNGKTHKAERVFRQLMKKGTQDP-PSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVP 455
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMF 376
D Y L++ + KG +A K E M
Sbjct: 456 DFETYVLLINGFLQKGEPILAYKTLERML 484
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 34/239 (14%)
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG---IKMDVVAYN 216
K EF+ + G D SY + +DI+ ++G A ++++ +K++ N
Sbjct: 42 KAFEFFNWASRNGFAHDSRSYFMMLDILGRNGNLNIARNFLFSIERRSNGSVKIEDRFCN 101
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
T++R+ G + + A++++ M+ G PSV+T N+++ +L + GR A++V EM
Sbjct: 102 TLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCG- 160
Query: 277 GCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVV 336
TY G+ P T+ +L+R F + + F
Sbjct: 161 -------TY-----------------------GVTPDTYTFNILIRGFCKNSMVDEGFRF 190
Query: 337 WKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+K+M C PD YN LVD L G + +A + M K P T LV+G
Sbjct: 191 FKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRG 249
>gi|8778269|gb|AAF79278.1|AC068602_1 F14D16.2 [Arabidopsis thaliana]
Length = 977
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 173/398 (43%), Gaps = 51/398 (12%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
ND+ AL FF W++ F H TY +++ LG+ +F L+ M + PN
Sbjct: 459 NDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRD-GCQPNTV 517
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE 127
T+ + Y A+ +NEAM FN++ E G K D V+YC L+D I A+
Sbjct: 518 TYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLID--------IHAK------ 563
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
+G +++ + ++ M G+ D +YS+ ++ +
Sbjct: 564 ------AGFLDI---------------------AMDMYQRMQAGGLSPDTFTYSVIINCL 596
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
K+G A KL+ EM +G ++V YN ++ + A+++YR+M+ G +P
Sbjct: 597 GKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDK 656
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGL---FDR 304
VT + V+++L G + EA AV EM +K +PD Y K + +
Sbjct: 657 VTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA 716
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID-KG 363
M+ +G+RP + T LL F R + + + + M LG P Y L+ D +
Sbjct: 717 MLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRS 776
Query: 364 MLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
LDM + ++ A + P K+ G DGE
Sbjct: 777 KLDMG--FCGQLMAS--TGHPAHMFLLKMPAAGPDGEN 810
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 113/237 (47%), Gaps = 7/237 (2%)
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKR-GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
N +L+ +M+ +G F+ + ++ G D H+Y+ + + ++ + KL EM
Sbjct: 452 NQVLK---QMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMV 508
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+ G + + V YN +I + G + ++ AM V+ +M+E GC+P VT T+I + + G +
Sbjct: 509 RDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLD 568
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLL 321
A + M G PD TY CL K + LF M++ G P + TY +++
Sbjct: 569 IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMM 628
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+ + +++ M+ G PD+ Y+ +++ L G L+ A EM K
Sbjct: 629 DLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 685
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 72/168 (42%), Gaps = 12/168 (7%)
Query: 224 VSEGVDFAMRVYR-------EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
+ E V +R +R ++ +G + N V+K + + G + L P
Sbjct: 418 IVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQP-- 475
Query: 277 GCVPDVITYHCFFRCLEKPRE---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
G D TY L + ++ I L D M+ G +P TY L+ +GR +L
Sbjct: 476 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 535
Query: 334 FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
V+ +M+E GC PD Y L+D G LD+A + M A GLS
Sbjct: 536 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS 583
>gi|302808035|ref|XP_002985712.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
gi|300146621|gb|EFJ13290.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
Length = 447
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 156/336 (46%), Gaps = 16/336 (4%)
Query: 46 EFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYC 105
EF + L+ MK N PN + + TA V++A+ F ++ E + +Y
Sbjct: 45 EFQQALELLDEMKSNGVR-PNVVIHTTIIRGLCTAGKVSQALLHFRRIGEDCAPNVYTYS 103
Query: 106 NLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFW 165
LVDALC+ EA L K +V YN ++ G+ K+ +
Sbjct: 104 TLVDALCKSGQPHEAYGLVTEMVKKGCSPNVV------TYNALIDGFRKLERLDEVLMLL 157
Query: 166 EEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVS 225
+EM +RG D+ +Y++ +DI CK+ +A +L ++K+ +VV YN++ A+ +
Sbjct: 158 KEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKR----NVVTYNSLFTALSTA 213
Query: 226 EG--VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVI 283
EG A+ + +M + G +P+ V TV+ +LC+N R+ EAY VL M +GC D +
Sbjct: 214 EGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDV 273
Query: 284 TYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
+Y F + + L L RM+ SG T +++ KF + G L ++K M
Sbjct: 274 SYKILVVAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSM 333
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
+ G P YN L+ A D A K +M
Sbjct: 334 YQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMI 369
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 139/291 (47%), Gaps = 26/291 (8%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWG 159
+EVSY L+ C+ +A EL E K+ G V ++ T I+RG + G
Sbjct: 29 NEVSYGILMQGFCKAGEFQQALEL-LDEMKSNGVRPNVVIHTT-----IIRG---LCTAG 79
Query: 160 KCREFWEEMDKRG--VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
K + + G ++++YS +D +CKSG+P +A L EM KKG +VV YN
Sbjct: 80 KVSQALLHFRRIGEDCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNA 139
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
+I E +D + + +EM + GC+ V+T ++ + C+N + EAY +L + K+
Sbjct: 140 LIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKR- 198
Query: 278 CVPDVITYHCFFRCL-----EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
+V+TY+ F L ++ E L L ++MI+ G RP Y +L + L
Sbjct: 199 ---NVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDE 255
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDE-EMFAKGLSA 382
+ V M GC D+ +Y LV A + G R YD E+ + L +
Sbjct: 256 AYQVLLSMYSQGCKTDDVSYKILVVAFANAG-----RTYDSLELLGRMLGS 301
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 118/256 (46%), Gaps = 14/256 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAH--LVNEAMGTF 90
TY ++DI K D ++ L++ ++ N T+ +F TA EA+
Sbjct: 171 TYTMILDIFCKNNSIDEAYRLLNALEKR-----NVVTYNSLFTALSTAEGDRTTEALSLL 225
Query: 91 NKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
K+ + G + ++V+Y ++ LC+ + EA ++ +S + + Y +++
Sbjct: 226 EKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSM-----YSQGCKTDDVS-YKILV 279
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
+ E M G + D + ++ + CK+G +A +L+K M ++G
Sbjct: 280 VAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMYQRGSI 339
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
V YNT+I A ++ D A+++ +M + +P+V+T N++IK C R EA +
Sbjct: 340 PSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGI 399
Query: 270 LAEMPKKGCVPDVITY 285
M GC PD ++Y
Sbjct: 400 FQMMVDNGCFPDRVSY 415
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 4/188 (2%)
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ I S + + Y+ ++ V+Y +++ + A+ + EM+ G
Sbjct: 2 LQIFVDSKRHRDGYEFYRHRLLGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGV 61
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILG 300
+P+VV T+I+ LC G+V +A + + C P+V TY L K P E G
Sbjct: 62 RPNVVIHTTIIRGLCTAGKVSQALLHFRRIGED-CAPNVYTYSTLVDALCKSGQPHEAYG 120
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L M++ G P + TY L+ F + L V ++ K+M + GC D Y ++D
Sbjct: 121 LVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFC 180
Query: 361 DKGMLDMA 368
+D A
Sbjct: 181 KNNSIDEA 188
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 108/252 (42%), Gaps = 17/252 (6%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLS---WNLIHRMKDNPS 62
C N A N +E TYNS+ L E D + +L+ +M +
Sbjct: 180 CKNNSIDEAYRLLNALEK-----RNVVTYNSLFTALSTA-EGDRTTEALSLLEKMIQEGT 233
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQ 121
PN +R + ++EA + G K D+VSY LV A ++
Sbjct: 234 R-PNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFANAGRTYDSL 292
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
EL G G+ + TK N+++ + K + + ++ M +RG + +Y+
Sbjct: 293 EL-LGRMLGSGY-----ILDTKTMNVVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNVTYN 346
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+ CK+ +P AVKL +M + K +V+ YN++I++ + + A +++ M +
Sbjct: 347 TLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDN 406
Query: 242 GCQPSVVTCNTV 253
GC P V+ T+
Sbjct: 407 GCFPDRVSYTTL 418
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 160/358 (44%), Gaps = 50/358 (13%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PNH TF ++ + + + +A+ T + + FGL D V+Y L++A C + EA+ L
Sbjct: 206 PNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 265
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
++ G+ T YN ++ + ++ W + + E M G DL +Y++
Sbjct: 266 LARMKRD----GIAPTQPT--YNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVL 319
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKM-DVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+C++GK +A +L EM++ + DVV YNT++ A A+R+ EMR+ G
Sbjct: 320 AVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKG 379
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---L 299
+P++VT N V+K LC+ G++ EA L ++ ++G PDVITY+ K +
Sbjct: 380 VKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAF 439
Query: 300 GLFDRMIESGIRPKMDTYVM------------------LLRKFGRWGFL----------- 330
L D M+ G+ KMDT+ + LL + GF+
Sbjct: 440 TLMDEMVGKGL--KMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMA 497
Query: 331 --------RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
P +W +M E P YN L+ L L A E+ KGL
Sbjct: 498 AYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGL 555
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 158/348 (45%), Gaps = 12/348 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++++ + + L+ RMK + P T+ + + + +A
Sbjct: 245 TYNTLLNAHCRKGMLGEARALLARMKRD-GIAPTQPTYNTLVSAFARLGWIKQATKVVES 303
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFG-ENKNVGFSGLVEMNKTKIYNMILR 150
+ +G + ++ +Y L LC+ V EA L E + +V YN ++
Sbjct: 304 MTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVV------TYNTLVD 357
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
FK EEM +GV L +++I + +CK GK +A+ +++ ++G+
Sbjct: 358 ACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAP 417
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
DV+ YNT+I A + V A + EM G + T NTV+ LC+ R +A +L
Sbjct: 418 DVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELL 477
Query: 271 AEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
P++G VPD ++Y K P L L+D+MIE + P + TY L++ R
Sbjct: 478 HSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRM 537
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
L+ ++ E G PDE YN ++ A +G L+ A ++ +M
Sbjct: 538 ERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKM 585
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 154/335 (45%), Gaps = 11/335 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN+++D K+ + L+ M+D P T I+ K + EA+G K
Sbjct: 351 TYNTLVDACFKWRCSSDALRLLEEMRDK-GVKPTLVTHNIVVKSLCKEGKLEEALGKLEK 409
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E GL D ++Y L+DA C+ +V +A L ++ VG GL +M+ T N +L
Sbjct: 410 IAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLM---DEMVG-KGL-KMD-TFTLNTVLYN 463
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
KM + E +RG V D SY M K P A++L+ +M ++ +
Sbjct: 464 LCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ YNT+I+ + E + A+ E+ E G P T N +I C+ G + A+
Sbjct: 524 ISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHN 583
Query: 272 EMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+M + PDV+T + CL K + L LF+ +E G + + TY L++ + G
Sbjct: 584 KMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVG 643
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
+ + ME G PD F YN ++ AL + G
Sbjct: 644 DVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAG 678
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 168/391 (42%), Gaps = 47/391 (12%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TYN+++ + + ++ M P+ T+ ++ A V+EA
Sbjct: 277 TQPTYNTLVSAFARLGWIKQATKVVESMTAY-GFEPDLRTYNVLAVGLCQAGKVDEAFRL 335
Query: 90 FNKLDEF--GLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
++++ L D V+Y LVDA +++ +A L E ++ G + + + ++
Sbjct: 336 KDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRL-LEEMRDKGVKPTLVTHNIVVKSL 394
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
G + + GK + EE G+ D+ +Y+ +D CK+G KA L EM KG
Sbjct: 395 CKEGKLEEAL-GKLEKIAEE----GLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKG 449
Query: 208 IKMDV-----------------------------------VAYNTVIRAVGVSEGVDFAM 232
+KMD V+Y TV+ A + A+
Sbjct: 450 LKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPAL 509
Query: 233 RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
R++ +M E PS+ T NT+IK LC R++EA L E+ +KG VPD TY+
Sbjct: 510 RLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAY 569
Query: 293 EKPREILGLF---DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE 349
K ++ F ++M+E+ +P + T L+ G L +++ E G D
Sbjct: 570 CKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDV 629
Query: 350 FAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
YN L+ ++ G +D A + ++M KGL
Sbjct: 630 ITYNTLIQSMCKVGDVDTALHFFDDMEVKGL 660
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 6/217 (2%)
Query: 170 KRGVVKDLHSYSIYMDIMCKSGK--PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
+RGV L + + + + +S P ++ +++ + + + + +N ++
Sbjct: 164 RRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGT 223
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
+ A+ M+ G P VT NT++ C G + EA A+LA M + G P TY+
Sbjct: 224 LADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNT 283
Query: 288 FFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
+ ++ + + M G P + TY +L + G + F + +ME L
Sbjct: 284 LVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLS 343
Query: 345 CS-PDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ PD YN LVDA A + EEM KG+
Sbjct: 344 TALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGV 380
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 106/270 (39%), Gaps = 47/270 (17%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQE 122
IP+ +T+ + K + EA+ N+L E GL DE +Y ++ A C+ + A
Sbjct: 521 IPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFR 580
Query: 123 LCFGENKNV--GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
NK V F V T + + L G K+ K E W E +G D+ +Y
Sbjct: 581 F---HNKMVENSFKPDVVTCNTLMNGLCLHG--KLDKALKLFESWVE---KGKKVDVITY 632
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ + MCK G A+ + +M+ KG++ D YN V+ A+ + + A + ++ +
Sbjct: 633 NTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLAD 692
Query: 241 MGCQPSVVTCNTV------------------------------------IKLLCENGRVR 264
G C + + LC G+++
Sbjct: 693 SGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLK 752
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
EA AVL EM +KG D TY L K
Sbjct: 753 EAKAVLDEMMQKGMPVDSSTYITLMEGLIK 782
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 275 KKGCVPDVITYHCFFRCLEK-----PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
++G P + + L + P+ L +F +IE + P T+ +L+ G
Sbjct: 164 RRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGT 223
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
L M+ G SPD YN L++A KGML AR M G++
Sbjct: 224 LADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIA 275
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 155/320 (48%), Gaps = 17/320 (5%)
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDAL----CEYKHVIEAQELC 124
F + Y + L EA+ FN + E+GL+ V+Y ++DA E+K V +
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAK----F 326
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F E + G V+ ++ +N +L + W R ++EM R + +D+ SY+ +
Sbjct: 327 FDEMQRNG----VQPDRI-TFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLL 381
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D +CK G+ A ++ +M K I +VV+Y+TVI + D A+ ++ EMR +G
Sbjct: 382 DAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIA 441
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGL 301
V+ NT++ + + GR EA +L EM G DV+TY+ K E+ +
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKV 501
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
F M + P + TY L+ + + G + ++++ + G D Y+AL+DAL
Sbjct: 502 FTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCK 561
Query: 362 KGMLDMARKYDEEMFAKGLS 381
G++ A +EM +G+S
Sbjct: 562 NGLVGSAVSLIDEMTKEGIS 581
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 135/305 (44%), Gaps = 24/305 (7%)
Query: 33 TYNSVIDILGK-FFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
TYN+VID GK EF M+ N P+ TF + L A F+
Sbjct: 305 TYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQ-PDRITFNSLLAVCSRGGLWEAARNLFD 363
Query: 92 KLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI------ 144
++ ++ +V SY L+DA+C+ G ++ F L +M +I
Sbjct: 364 EMTNRRIEQDVFSYNTLLDAICK------------GGQMDLAFEILAQMPVKRIMPNVVS 411
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y+ ++ G+ K + + + EM G+ D SY+ + I K G+ +A+ + +EM
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMA 471
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
GIK DVV YN ++ G D +V+ EM+ P+++T +T+I + G +
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYK 531
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
EA + E G DV+ Y L K + + L D M + GI P + TY ++
Sbjct: 532 EAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Query: 322 RKFGR 326
FGR
Sbjct: 592 DAFGR 596
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 164/350 (46%), Gaps = 22/350 (6%)
Query: 11 WKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
W+ A F+ + T+ +YN+++D + K + DL++ ++ +M +PN ++
Sbjct: 355 WEAARNLFDEM-TNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVK-RIMPNVVSY 412
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENK 129
+ + A +EA+ F ++ G+ D VSY L+ + EA ++ E
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI-LREMA 471
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
+VG V YN +L G+ K + + ++ + EM + V+ +L +YS +D K
Sbjct: 472 SVGIKKDV-----VTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSK 526
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
G +A+++++E K G++ DVV Y+ +I A+ + V A+ + EM + G P+VVT
Sbjct: 527 GGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVT 586
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRM-IES 308
N++I + + + A+ G +P + E R ++ LF ++ ES
Sbjct: 587 YNSIIDAFGRSATMDRS----ADYSNGGSLPFSSSALSALTETEGNR-VIQLFGQLTTES 641
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
R D + L + V++KM +L P+ ++A+++A
Sbjct: 642 NNRTTKDCEEGMQE-------LSCILEVFRKMHQLEIKPNVVTFSAILNA 684
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 108/255 (42%), Gaps = 41/255 (16%)
Query: 161 CREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIR 220
+ +E G ++++S + +SG +A+ ++ MK+ G++ ++V YN VI
Sbjct: 252 AKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID 311
Query: 221 AVGVSEGVDF--AMRVYREMREMGCQPSVVT-------C--------------------- 250
A G G++F + + EM+ G QP +T C
Sbjct: 312 ACGKG-GMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRI 370
Query: 251 -------NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILG 300
NT++ +C+ G++ A+ +LA+MP K +P+V++Y K E L
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN 430
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
LF M GI +Y LL + + G + ++M +G D YNAL+
Sbjct: 431 LFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYG 490
Query: 361 DKGMLDMARKYDEEM 375
+G D +K EM
Sbjct: 491 KQGKYDEVKKVFTEM 505
>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
Length = 663
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 161/343 (46%), Gaps = 12/343 (3%)
Query: 59 DNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHV 117
+N +P T+ M + + + A F ++ GL D ++Y +L++ C+ +
Sbjct: 329 ENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQ 388
Query: 118 IEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
EA L FG+ + G + V YN+++ G+ ++ + R EEM ++G + D+
Sbjct: 389 KEAL-LLFGDLRRAGLAPTV-----LTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDV 442
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
++Y+I M + + EM KG++ D AYNT I A + + ++
Sbjct: 443 YTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREV 502
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC-LEKP- 295
+ G VT N +I LC+ G +++A ++ +M G PD ITY C E+
Sbjct: 503 IMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGF 562
Query: 296 -REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
RE F+ MI G+ P TY +++ + R G L + ++KM E G P+E YN
Sbjct: 563 LREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNV 622
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGL 397
L+ AL G +A ++ EM +GL P + T L+ G L
Sbjct: 623 LIHALCRMGRTQLAYRHFYEMLERGLV--PNKYTYTLLIDGKL 663
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 146/332 (43%), Gaps = 11/332 (3%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TYN++I L + + + + M+ +P+ T+ + Y A EA+
Sbjct: 336 TVVTYNAMIHGLLQSGQIEAAQAKFVEMRAM-GLLPDVITYNSLLNGYCKAGNQKEALLL 394
Query: 90 FNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
F L GL V +Y L+D C + EA+ L + + V L ++ Y ++
Sbjct: 395 FGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRL---KEEMVEQGCLPDV---YTYTIL 448
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
++G + REF++EM +G+ D +Y+ + G K+ +L + + +GI
Sbjct: 449 MKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGI 508
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
D V YN +I + + + A + +M G QP +T +I CE G +REA
Sbjct: 509 SSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARK 568
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFG 325
+M G P +TY + + G F +M+E G+ P TY +L+
Sbjct: 569 FFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALC 628
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
R G + + + +M E G P+++ Y L+D
Sbjct: 629 RMGRTQLAYRHFYEMLERGLVPNKYTYTLLID 660
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 9/242 (3%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G + K + EM+ G++ + +Y+ + + +SG+ A + EM+
Sbjct: 305 YNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMR 364
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
G+ DV+ YN+++ + A+ ++ ++R G P+V+T N +I C G +
Sbjct: 365 AMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLE 424
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFR------CLEKPREILGLFDRMIESGIRPKMDTYV 318
EA + EM ++GC+PDV TY + L RE FD M+ G+RP Y
Sbjct: 425 EARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTRE---FFDEMLSKGLRPDCFAYN 481
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+ G + F + + + G S D YN L+D L G L A + +M +
Sbjct: 482 TRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISN 541
Query: 379 GL 380
GL
Sbjct: 542 GL 543
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 125/297 (42%), Gaps = 41/297 (13%)
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
LC + + G+ K N +LR + W EM + G+ + +Y+
Sbjct: 179 LCLSAFREMASHGVAP--DVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNT 236
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIK--MDVVAYNTVIRAVG------VSEGVDFAMRV 234
+D K G+ K L KEM+ +G + V YN VI + + + MR+
Sbjct: 237 LLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRL 296
Query: 235 YR----------------------------EMREMGCQPSVVTCNTVIKLLCENGRVREA 266
+ EM G P+VVT N +I L ++G++ A
Sbjct: 297 SKKASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAA 356
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRK 323
A EM G +PDVITY+ K +E L LF + +G+ P + TY +L+
Sbjct: 357 QAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDG 416
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ R G L + ++M E GC PD + Y L+ + L M R++ +EM +KGL
Sbjct: 417 YCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGL 473
>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
Length = 482
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 166/366 (45%), Gaps = 22/366 (6%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T +YN +I+ K D + L MK P P+ +T+ + + EA
Sbjct: 100 NTVSYNILINAFCKTKRIDEAIQLFGEMK-APGCAPSTSTYNTLIGGLCRVERLGEAQQF 158
Query: 90 FNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
+ +L G ++Y LVD C+ V EA EL N+ V G+V + YN I
Sbjct: 159 YERLLSSGAGASFITYNILVDGFCKADRVPEAVELL---NELVARGGVV---TSAPYNCI 212
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ FK + F+ M+K GV ++++ +D +CK+ + +A +++ + G
Sbjct: 213 IDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGG 272
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
VV + ++ GVD A R++ M GC P+ V+CN +I LC+ R+ +A
Sbjct: 273 SPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQARE 332
Query: 269 VLAEMPKKGCVPDVITYHCFFRCL------EKPREILGLFDRMIESGIRPKMDTYVMLLR 322
V E+ K+ PDV+TY F L ++ R++L + +++ G P + Y L+
Sbjct: 333 VFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCM---LVDKGGTPDVVMYTALIS 389
Query: 323 ---KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
GR R VF V M GC+P+ F N LV+ G LD AR+ + +G
Sbjct: 390 GLCSLGRLDEARKVFEV--DMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERG 447
Query: 380 LSAKPR 385
+ R
Sbjct: 448 VQPDCR 453
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/439 (24%), Positives = 185/439 (42%), Gaps = 62/439 (14%)
Query: 6 CYANDWKRALEFFNWVETD-CHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C+ ALE F+ + +D C + ++ L K + ++ M D
Sbjct: 10 CHVGKLDEALELFHSLVSDGCGLPA-----DLLVRELSKAGRAEECLKVVKLMLDRQQLR 64
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEF-GLKDEVSYCNLVDALCEYKHVIEAQEL 123
H I + ++++A F +L +F GL + VSY L++A C+ K + EA +L
Sbjct: 65 ERHLV-NITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQL 123
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
FGE K G + T YN ++ G ++ G+ ++F+E + G +Y+I
Sbjct: 124 -FGEMKAPGCA-----PSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNIL 177
Query: 184 MDIMCKSGKPWKAVKLYKE-----------------------------------MKKKGI 208
+D CK+ + +AV+L E M+K G+
Sbjct: 178 VDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGV 237
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ V + +I + + V A ++ E G PSVV C+ ++ C+ G V EA+
Sbjct: 238 RPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWR 297
Query: 269 VLAEMPKKGCVPD------VITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLR 322
+ M +GC P+ +I C + L + RE+ F+ +++ +P + TY +
Sbjct: 298 IFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREV---FEEVVKRQAKPDVVTYSTFMD 354
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK-YDEEMFAKGLS 381
R + V + + G +PD Y AL+ L G LD ARK ++ +M A G +
Sbjct: 355 GLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCA 414
Query: 382 AKPREELGTKLVQG-GLDG 399
P LV G GL G
Sbjct: 415 --PNNFTCNVLVNGFGLAG 431
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 130/286 (45%), Gaps = 16/286 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDIL---GKFFEFDLSWNLIHRMKDNPS 62
C A+ A+E N + T+ YN +ID L GK E +L +N RM+ +
Sbjct: 182 CKADRVPEAVELLNELVARGGVV-TSAPYNCIIDTLFKKGKIHEAELFFN---RMEKDGV 237
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQ 121
P TF ++ A+ V A F E G V C+ L+D C+Y V EA
Sbjct: 238 R-PQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAW 296
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
+ F N G + N N+++ G K + RE +EE+ KR D+ +YS
Sbjct: 297 RI-FELMTNRGCTP----NDVSC-NILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYS 350
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR-EMRE 240
+MD +C++ + +A ++ + KG DVV Y +I + +D A +V+ +MR
Sbjct: 351 TFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRA 410
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
GC P+ TCN ++ GR+ EA + ++G PD T+
Sbjct: 411 AGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFS 456
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 141/293 (48%), Gaps = 18/293 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNP---SSIPNHATFRIMFKRYVTAHLVNEAMGT 89
TYN ++D K + L++ + +S P + +FK+ ++EA
Sbjct: 173 TYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKK----GKIHEAELF 228
Query: 90 FNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
FN++++ G++ EV++ L+D LC+ V A+E+ F ++ G +V I + +
Sbjct: 229 FNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVV------ICSCL 282
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G+ K + +E M RG + S +I ++ +CK+ + +A ++++E+ K+
Sbjct: 283 MDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQA 342
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
K DVV Y+T + + + VD A +V + + G P VV +I LC GR+ EA
Sbjct: 343 KPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARK 402
Query: 269 VL-AEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTY 317
V +M GC P+ T + F + E LF R +E G++P T+
Sbjct: 403 VFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTF 455
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 120/268 (44%), Gaps = 12/268 (4%)
Query: 106 NLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFW 165
++V LC + EA EL F LV ++++R K +C +
Sbjct: 4 DIVLCLCHVGKLDEALEL---------FHSLVSDGCGLPADLLVRELSKAGRAEECLKVV 54
Query: 166 EEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVS 225
+ M R +++ H +I +D +CKS KA ++E+K ++ V+YN +I A +
Sbjct: 55 KLMLDRQQLRERHLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKT 114
Query: 226 EGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
+ +D A++++ EM+ GC PS T NT+I LC R+ EA + G ITY
Sbjct: 115 KRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITY 174
Query: 286 HCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE 342
+ F ++ E + L + ++ G Y ++ + G + + + +ME+
Sbjct: 175 NILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEK 234
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARK 370
G P E + L+D L + A++
Sbjct: 235 DGVRPQEVTFTVLIDGLCKANRVARAKE 262
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 121/237 (51%), Gaps = 3/237 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+N +L+G K + K +E + MD+ V D+ S++I + C+ G+ +A+K YKEM+
Sbjct: 230 FNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQ 289
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
++G+ DVV+++ +I +D A REM+ +G P V VI C G +
Sbjct: 290 QRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMS 349
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLL 321
EA V EM GC+PDV+TY+ L K +L L + M E G+ P + T+ L+
Sbjct: 350 EALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLI 409
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+ R G ++ + PD AYN+L+D + KG L A + ++M A+
Sbjct: 410 HGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAR 466
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 174/382 (45%), Gaps = 18/382 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + +A E F ++ C ++N +I + E + + M+ P
Sbjct: 238 CKHRRFDKAKEVFRAMD-QCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQR-GVTP 295
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELC 124
+ +F + + T ++ A ++ GL D V Y ++ C + EA +
Sbjct: 296 DVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRV- 354
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
++ VG L ++ YN +L G K E EM +RGV DL +++ +
Sbjct: 355 --RDEMVGLGCLPDV---VTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLI 409
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
C+ G KA++L+ + + ++ DVVAYN++I + + A ++ +M
Sbjct: 410 HGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIF 469
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREI 298
P+ VT + +I CE G+V EA+ L EM KG +P+++TY +C ++K ++
Sbjct: 470 PNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQF 529
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
L +M++ I P + T+ L+ + + + F V+ ME+ PD YN +++
Sbjct: 530 L---QKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIING 586
Query: 359 LIDKGMLDMARKYDEEMFAKGL 380
++G ++ A + ++M A G+
Sbjct: 587 FSEQGNMEEAGRVFKKMGASGI 608
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 180/380 (47%), Gaps = 12/380 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + + A++F+ ++ T +++ +I + + D + + MK +P
Sbjct: 273 CRVGEVEEAMKFYKEMQQR-GVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMK-GLGLVP 330
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELC 124
+ + ++ + A ++EA+ +++ G L D V+Y L++ LC+ +++A+EL
Sbjct: 331 DGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEEL- 389
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
E K G + + ++ G+ + + K + ++ + + + D+ +Y+ +
Sbjct: 390 LNEMKERGVT-----PDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLI 444
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D MC+ G KA +L+ +M + I + V Y+ +I + V+ A EM G
Sbjct: 445 DGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNL 504
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---L 301
P+++T N++IK C +G V++ L +M + +PD+IT++ K + G +
Sbjct: 505 PNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNV 564
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
F+ M + ++P TY M++ F G + V+KKM G PD + Y +L++ +
Sbjct: 565 FNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVT 624
Query: 362 KGMLDMARKYDEEMFAKGLS 381
G A + +EM +G +
Sbjct: 625 AGNSKEAFQLHDEMMHRGFA 644
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 110/239 (46%), Gaps = 3/239 (1%)
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N+++ + K + K EM+KR V D+ ++++ +D ++G A+ L M
Sbjct: 161 NIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMAN 220
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
KG+K +V +N+V++ + D A V+R M + P V + N +I C G V E
Sbjct: 221 KGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEE 280
Query: 266 AYAVLAEMPKKGCVPDVITYHC---FFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLR 322
A EM ++G PDV+++ C F K M G+ P Y M++
Sbjct: 281 AMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIG 340
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
F R G + V +M LGC PD YN L++ L + L A + EM +G++
Sbjct: 341 GFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVT 399
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 122/284 (42%), Gaps = 11/284 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++++ L K + L++ MK+ P+ TF + Y +A+ F+
Sbjct: 369 TYNTLLNGLCKQHRLLDAEELLNEMKER-GVTPDLCTFTTLIHGYCRDGNFEKALQLFDT 427
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
L L+ D V+Y +L+D +C + +A EL + F V Y++++
Sbjct: 428 LLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHV------TYSILIDS 481
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + F +EM +G + ++ +Y+ + C+SG K + ++M + I D
Sbjct: 482 HCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPD 541
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
++ +NT+I E + A V+ M + QP VT N +I E G + EA V
Sbjct: 542 LITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFK 601
Query: 272 EMPKKGCVPDVITYHCFFR---CLEKPREILGLFDRMIESGIRP 312
+M G PD TY +E L D M+ G P
Sbjct: 602 KMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAP 645
>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 182/402 (45%), Gaps = 36/402 (8%)
Query: 1 RETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWN----LIHR 56
R L C ++ + AL FFNWV+ D +T Y V+ L F + L+
Sbjct: 105 RVLLRCQSDSFT-ALSFFNWVKNDLGLRPSTQNYCIVVHTLAWSRNFSQAMKFLCELVEL 163
Query: 57 MKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKH 116
+KD+ +P+ F+ + L E D V + LV A
Sbjct: 164 VKDD---LPSEDVFKNLI-------LCTEDCNW----------DPVVFDMLVKAYLRMGR 203
Query: 117 VIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
V E F VGF V + N +L G K+++ +C E +EEM++ G+ +
Sbjct: 204 VREGLR-SFRRMLRVGFVPTVITS-----NYLLNGLLKLNYTDRCWEVYEEMERFGIAPN 257
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
L++++I ++CK G K K ++M+++G D+V YNT+I + +D A +Y+
Sbjct: 258 LYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYK 317
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE- 293
M G P +V+ ++ LC+ GRVREA+ + M +G PD++TY+ C E
Sbjct: 318 IMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEG 377
Query: 294 KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
K +E L MI +GI P T +L+ +G+ G + +++ G S + Y+
Sbjct: 378 KMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYS 437
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
L+ AL + A+ E M G KP E+ +L++
Sbjct: 438 YLIVALCRENRPFAAKNLLERMSKDG--HKPELEIYNELIKS 477
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 134/326 (41%), Gaps = 41/326 (12%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ + Y +++A + + G+ D VSY L++ LC+ V EA +L
Sbjct: 291 PDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQL 350
Query: 124 CFGENKNVGFS----------------GLVEMNKTKIYNMILRG--------WFKMSWWG 159
F + G S G ++ +++ +++MI G W + +G
Sbjct: 351 -FHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYG 409
Query: 160 KCREFWE------EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
K +F E+ + GV YS + +C+ +P+ A L + M K G K ++
Sbjct: 410 KEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELE 469
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
YN +I++ + + A+ + EM + +P++ T VI L R E +++ EM
Sbjct: 470 IYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGESLVGEM 529
Query: 274 PKKGCVPDVITYHCFF------RCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
G +PD+ F ++K +L F + + +++ L+R
Sbjct: 530 VASGMLPDLEICRALFYGYCRENDIDKAESLLSFFAKEFQIH---DTESFNALIRITSAK 586
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYN 353
G + + M ++G P+ N
Sbjct: 587 GDIARSLEIQDMMLKMGLLPNPLTCN 612
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 149/317 (47%), Gaps = 9/317 (2%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDA-LCEYKHVIEAQELCFGE 127
F + F+ V A L+ EA F+KL +G+ V CNL A L I F E
Sbjct: 183 VFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFRE 242
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
VG T YN+IL ++ + +M+ RG V D+ SYS+ +D
Sbjct: 243 YSEVGVCW-----NTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGY 297
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
C+ + K +KL +E+++KG+K + YN++I + + V A +V R M+ P
Sbjct: 298 CQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDN 357
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDR 304
V T+I ++G V Y + EM +K VPD +TY L K E LF
Sbjct: 358 VVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSE 417
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
M+ G++P TY L+ + + G ++ F + +M E G +P+ Y ALVD L G
Sbjct: 418 MLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGE 477
Query: 365 LDMARKYDEEMFAKGLS 381
+D+A + EM KGL
Sbjct: 478 VDIANELLHEMSEKGLQ 494
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 147/302 (48%), Gaps = 10/302 (3%)
Query: 83 VNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
+ A F + E G+ + VSY ++ LC+ V EA L + F G V
Sbjct: 233 IRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLI----QMEFRGNVP--D 286
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
Y++I+ G+ ++ GK + EE+ ++G+ + ++Y+ + +CK+G+ +A ++ +
Sbjct: 287 VVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLR 346
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
MK + I D V Y T+I G S V +++ EM+ P VT ++I LC+ G
Sbjct: 347 VMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAG 406
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYV 318
+V EA + +EM KG PD +TY K +E L ++M+E G+ P + TY
Sbjct: 407 KVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYT 466
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
L+ + G + + +M E G P+ YNAL++ L G ++ A K EEM
Sbjct: 467 ALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLA 526
Query: 379 GL 380
G
Sbjct: 527 GF 528
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 183/387 (47%), Gaps = 40/387 (10%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T +YN ++ +L + + + +L+ +M+ ++P+ ++ ++ Y + + +
Sbjct: 251 NTVSYNIILHLLCQLGKVKEAHSLLIQMEFR-GNVPDVVSYSVIVDGYCQVEQLGKVLKL 309
Query: 90 FNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC---------------------FGE 127
+L GLK ++ +Y +++ LC+ V+EA+++ FG+
Sbjct: 310 MEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGK 369
Query: 128 NKNVG--FSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
+ NV + EM + KI Y ++ G + + R+ + EM +G+ D +
Sbjct: 370 SGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVT 429
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y+ +D CK+G+ +A L+ +M +KG+ +VV Y ++ + VD A + EM
Sbjct: 430 YTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMS 489
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------HCFFRCLE 293
E G QP+V T N +I LC+ G + +A ++ EM G PD ITY +C +
Sbjct: 490 EKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMA 549
Query: 294 KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
K E+L + M++ G++P + T+ +L+ F G L + K M + G P+ +N
Sbjct: 550 KAHELLRI---MLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFN 606
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGL 380
+L+ + + + + M A+G+
Sbjct: 607 SLMKQYCIRNNMRATIEIYKGMHAQGV 633
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 135/303 (44%), Gaps = 10/303 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ + Y A + EA N++ E GL + V+Y LVD LC+ V A EL
Sbjct: 425 PDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANEL 484
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
E G V YN ++ G K+ + + EEMD G D +Y+
Sbjct: 485 -LHEMSEKGLQPNV-----CTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTI 538
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
MD CK G+ KA +L + M KG++ +V +N ++ +S ++ R+ + M + G
Sbjct: 539 MDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGI 598
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILG 300
P+ T N+++K C +R + M +G VPD TY+ + K R E
Sbjct: 599 MPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWF 658
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L M+E G +Y L++ F + ++++M G ++ Y+ VD
Sbjct: 659 LHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNY 718
Query: 361 DKG 363
++G
Sbjct: 719 EEG 721
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 176/396 (44%), Gaps = 18/396 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMK-DNPSSI 64
C N + A + N ++ F TYN +I L + L+ ++ ++ DN +
Sbjct: 158 CKVNQIEAATQVLNRMKAR-GFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDN--CM 214
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
P T+ I+ + + +NEAM ++ GL D +Y ++ +C+ V A EL
Sbjct: 215 PTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAEL 274
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
++ YN++LR + W + + EM RG + +YSI
Sbjct: 275 ITSLTSKGCEPDVIS------YNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSIL 328
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ +C+ G+ +A+ + K M +K + D +Y+ +I A+ +D A+ + M GC
Sbjct: 329 ISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC 388
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH----CFFRCLEKPREIL 299
P +V NT++ LC+NG +A + ++ GC P+V +Y+ + C ++ R L
Sbjct: 389 LPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRA-L 447
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
G+ MI GI P TY L+ R G + + ME+ G P +YN ++ L
Sbjct: 448 GMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGL 507
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+D A EM KG +P E L++G
Sbjct: 508 CKVRRIDDAIGMFAEMIEKG--CRPNETTYILLIEG 541
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 113/238 (47%), Gaps = 3/238 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G+ K++ + M RG + D+ +Y+I + +C K A+ + ++
Sbjct: 150 YNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLL 209
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
V+ Y +I A V G++ AM++ EM G P + T N +I+ +C+ G V
Sbjct: 210 LDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVE 269
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLL 321
A ++ + KGC PDVI+Y+ R K E L M G P TY +L+
Sbjct: 270 RAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILI 329
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R+G + V K M E +PD ++Y+ L+ AL +G LD+A + M + G
Sbjct: 330 SSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNG 387
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 93/229 (40%), Gaps = 37/229 (16%)
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVV---------------------------------- 213
CK+GK +++ + + KG DV+
Sbjct: 89 CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVF 148
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
AYN VI ++ A +V M+ G P +VT N +I LC ++ A VL ++
Sbjct: 149 AYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQL 208
Query: 274 PKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
C+P VITY E + L + M+ G+ P M TY ++R + G +
Sbjct: 209 LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMV 268
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ + GC PD +YN L+ A +++G D K EMF++G
Sbjct: 269 ERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 317
>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 168/370 (45%), Gaps = 48/370 (12%)
Query: 11 WKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
+ + L FFNW F H+ + Y +ID+ GK
Sbjct: 126 FPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGK--------------------------- 158
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENK 129
A L EA+ FN+++++G K D++++ ++ +L + + IEAQ F K
Sbjct: 159 ---------AGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSF-FDSLK 208
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
+ +V +Y ++ GW + + + EM G+ ++++YSI +D +C+
Sbjct: 209 DRFEPDVV------VYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCR 262
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
SG+ +A ++ EM G + + +N ++R + + ++VY +M+ +GC P +T
Sbjct: 263 SGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAIT 322
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMI 306
N +I+ C + + EA +L + KKGC + +++ F C+ K ++ +F +M
Sbjct: 323 YNFLIESHCRDDNLEEAVKILNSV-KKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMK 381
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
+ RP TY +L+R F V + K+M+E P+ Y L+ G +
Sbjct: 382 DLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWN 441
Query: 367 MARKYDEEMF 376
A + +EM
Sbjct: 442 NAYSFFKEMI 451
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 161/364 (44%), Gaps = 43/364 (11%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D +ALE FN + + F HT TY SVI+ LG + +F+ ++ M++N +
Sbjct: 19 DPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGV 78
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENK 129
+ K Y V EA+ F ++D + + V
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTV--------------------------- 111
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
FS YN I+ ++ + + + M RG+ D++S++I M CK
Sbjct: 112 ---FS----------YNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCK 158
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
+ +P A++L M +G +M+VVAY TV+ ++ +M G + T
Sbjct: 159 TSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLST 218
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMI 306
N ++++LC+ G V+E +L ++ K+G +P++ TY+ F + L + E+ G + +I
Sbjct: 219 FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLI 278
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
E G +P + TY L+ + + V KM G PD + YN L+ GM+
Sbjct: 279 EQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQ 338
Query: 367 MARK 370
+A +
Sbjct: 339 LAER 342
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 153/336 (45%), Gaps = 12/336 (3%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+PN T+ + + ++ A+ L E G K D ++Y NL+ LC+ EA E
Sbjct: 248 LPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA-E 306
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ G+ N G + YN ++ G+ K + G V D +Y
Sbjct: 307 VYLGKMVNEGLE-----PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRS 361
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D +C G+ +A+ L+ E KGIK +V+ YNT+I+ + + A ++ EM E G
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 421
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREIL 299
P V T N ++ LC+ G V +A ++ M KG PD+ T++ + K L
Sbjct: 422 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ D M+++G+ P + TY LL + V +K M E GC+P+ F +N L+++L
Sbjct: 482 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 541
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
LD A EEM K S P L+ G
Sbjct: 542 CRYRKLDEALGLLEEM--KNKSVNPDAVTFGTLIDG 575
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 158/358 (44%), Gaps = 20/358 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAM----- 87
TYN++I L K +F + + +M N P+ T+ + Y +V A
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMV-NEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGD 346
Query: 88 GTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
FN + D+ +Y +L+D LC A L F E G V +YN
Sbjct: 347 AVFNGF----VPDQFTYRSLIDGLCHEGETNRALAL-FNEALGKGIKPNV-----ILYNT 396
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
+++G + + EM ++G++ ++ +++I ++ +CK G A L K M KG
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
D+ +N +I ++ A+ + M + G P V T N+++ LC+ + +
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKF 324
M +KGC P++ T++ L + R E LGL + M + P T+ L+ F
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGF 576
Query: 325 GRWGFLRPVFVVWKKMEEL-GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ G L + +++KMEE S YN ++ A +K + MA K +EM + L
Sbjct: 577 CKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLG 634
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 114/261 (43%), Gaps = 15/261 (5%)
Query: 115 KHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM-DKRGV 173
K ++A E+ K VGF + ++ I K+ ++GK E + D R
Sbjct: 18 KDPMKALEMFNSMRKEVGFKHTLSTYRSVIE--------KLGYYGKFEAMEEVLVDMREN 69
Query: 174 VKDLHSYSIYMDIM---CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF 230
V + +Y+ M + GK +AV +++ M + V +YN ++ + S D
Sbjct: 70 VGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQ 129
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR 290
A +VY MR+ G P V + +K C+ R A +L M +GC +V+ Y
Sbjct: 130 AHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVG 189
Query: 291 CLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
+ E LF +M+ SG+ + T+ LLR + G ++ + K+ + G P
Sbjct: 190 GFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLP 249
Query: 348 DEFAYNALVDALIDKGMLDMA 368
+ F YN + L +G LD A
Sbjct: 250 NLFTYNLFIQGLCQRGELDGA 270
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 138/350 (39%), Gaps = 70/350 (20%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY S+ID L E + + L + PN + + K ++ EA N+
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIK-PNVILYNTLIKGLSNQGMILEAAQLANE 416
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELC------------FGENKNV-GFSGLVE 138
+ E GL EV N LV+ LC+ V +A L F N + G+S ++
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476
Query: 139 M-NKTKI---------------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
M N +I YN +L G K S + E ++ M ++G +L +++I
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVA---------------------------- 214
++ +C+ K +A+ L +EMK K + D V
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596
Query: 215 --------YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
YN +I A V A ++++EM + P T ++ C+ G V
Sbjct: 597 KVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLG 656
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPK 313
Y L EM + G +P + T CL ++ E G+ RM++ G+ P+
Sbjct: 657 YKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 108/274 (39%), Gaps = 56/274 (20%)
Query: 19 NWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYV 78
N V+ D + TYNS+++ L K +F+ M + + PN TF I+ +
Sbjct: 490 NGVDPDVY------TYNSLLNGLCKTSKFEDVMETYKTMVEKGCA-PNLFTFNILLESLC 542
Query: 79 TAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLV 137
++EA+G ++ + D V++ L+D C+ + A L F +
Sbjct: 543 RYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTL---------FRKME 593
Query: 138 EMNK----TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
E K T YN+I+ + + + ++EM R + D ++Y + +D CK+G
Sbjct: 594 EAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGN- 652
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
V+ + EM E G PS+ T V
Sbjct: 653 ----------------------------------VNLGYKFLLEMMENGFIPSLTTLGRV 678
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
I LC RV EA ++ M +KG VP+ + C
Sbjct: 679 INCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTIC 712
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 168/353 (47%), Gaps = 12/353 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN ++ L + + ++ M+ PN T+ + + A ++ A +
Sbjct: 154 TYNILVRALCARGRLEEAVGVVGDMR-GAGCAPNAVTYNTLVAAFCRAGELDGAERVVSL 212
Query: 93 LDEFG--LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
+ E G + V++ ++V+ LC+ + A+++ F E G + V YN +L
Sbjct: 213 MREEGNAKPNLVTFNSMVNGLCKAGRMEGARKV-FDEMVREGLAPDVVS-----YNTLLS 266
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
G+ K+ + + EM +RG+V D+ +++ + CK+G +AV L +M+++G++M
Sbjct: 267 GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRM 326
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
+ V + +I +D A+ EMR+ G QPSVV N +I C+ GR+ A ++
Sbjct: 327 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 386
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPREILGLF---DRMIESGIRPKMDTYVMLLRKFGRW 327
EM K PDV+TY K + F +M++ G+ P TY L+R
Sbjct: 387 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE 446
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
L +++ M +LG PDEF Y L+D +G ++ A +EM KG+
Sbjct: 447 KRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGV 499
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 121/243 (49%), Gaps = 11/243 (4%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN +L S R F M + GV ++++Y+I + +C G+ +AV + +M+
Sbjct: 121 YNAVLLALSDASL-PSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMR 179
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG-CQPSVVTCNTVIKLLCENGRV 263
G + V YNT++ A + +D A RV MRE G +P++VT N+++ LC+ GR+
Sbjct: 180 GAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRM 239
Query: 264 REAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPKMDTY 317
A V EM ++G PDV++Y +C CL E L +F M + G+ P + T+
Sbjct: 240 EGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLH---ESLAVFSEMTQRGLVPDVVTF 296
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
L+ + G L + +M E G +E + AL+D KG LD A EEM
Sbjct: 297 TSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRK 356
Query: 378 KGL 380
G+
Sbjct: 357 CGI 359
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 158/351 (45%), Gaps = 27/351 (7%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+P+ TF + A + +A+ ++ E GL+ +EV++ L+D C+ K ++
Sbjct: 290 VPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCK-KGFLDDAL 348
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L E + G V YN ++ G+ K+ RE EM+ + V D+ +YS
Sbjct: 349 LAVEEMRKCGIQPSV-----VCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ CK G A +L ++M KKG+ D + Y+++IR + + ++ A ++ M ++G
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP------- 295
QP T T+I C+ G V +A ++ EM +KG +PDV+TY L K
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 523
Query: 296 REILGL-----------FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
R + L +D ++ + + + V LL+ F G ++ V++ M +
Sbjct: 524 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 583
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
D Y+ L+ G + A + ++M G S P LV+G
Sbjct: 584 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFS--PNSTSTISLVRG 632
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 109/228 (47%), Gaps = 7/228 (3%)
Query: 172 GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFA 231
G + +Y+ + + + P A + M + G+ +V YN ++RA+ ++ A
Sbjct: 113 GYAPSVPAYNAVLLALSDASLP-SARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV-PDVITYHCFFR 290
+ V +MR GC P+ VT NT++ C G + A V++ M ++G P+++T++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231
Query: 291 CLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
L K + G +FD M+ G+ P + +Y LL + + G L V+ +M + G P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
D + +L+ A G L+ A +M +GL + E T L+ G
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGL--RMNEVTFTALIDG 337
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 163/344 (47%), Gaps = 18/344 (5%)
Query: 59 DNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHV 117
+N +P T+ + + + V A F ++ GL D ++Y ++++ C+ ++
Sbjct: 341 ENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNL 400
Query: 118 IEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
EA L G+ + G + V YN ++ G+ ++ + R EEM ++G D+
Sbjct: 401 KEALWL-LGDLRRAGLAPTV-----LTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDV 454
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
+Y+I M+ K A + + EM KG++ D AYNT I A + A ++
Sbjct: 455 CTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREV 514
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC------ 291
M G P VT N +I LC+ G +++A + +M G PD ITY C
Sbjct: 515 MMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGL 574
Query: 292 LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFA 351
L + R++L + M+ G++P + TY +L+ R G L + ++KM ++G P+E
Sbjct: 575 LSEARKLL---NGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEIT 631
Query: 352 YNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
YN L+ AL G +A + EM +GL+ P + T L+ G
Sbjct: 632 YNVLIHALCRTGRTLLAYHHFHEMLERGLA--PNKYTYTLLIDG 673
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 152/355 (42%), Gaps = 11/355 (3%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TYN++I L K + + + M+ +P+ T+ M Y A + EA+
Sbjct: 348 TLVTYNAIIHGLLKSEQVEAAQLKFAEMRAM-GLLPDLITYNSMLNGYCKAGNLKEALWL 406
Query: 90 FNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
L GL V +Y L+D C + EA+ L + F + Y ++
Sbjct: 407 LGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVC------TYTIL 460
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G K+ REF++EM +G+ D +Y+ + G KA +L + M KGI
Sbjct: 461 MNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGI 520
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
D V YN +I + + + A + +M G QP +T +I CE G + EA
Sbjct: 521 YPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARK 580
Query: 269 VLAEMPKKGCVPDVITYHCFFR-CLEKPR--EILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+L M G P V+TY C + G F +M++ GI P TY +L+
Sbjct: 581 LLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALC 640
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
R G + + +M E G +P+++ Y L+D +G A + EM G+
Sbjct: 641 RTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGI 695
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 139/323 (43%), Gaps = 13/323 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG---LKDEVSYCNLVDALCEYKHVIEAQ 121
P T+ + ++ +EA +++ G L ++V+Y ++ L H+ A
Sbjct: 241 PTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAA 300
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
+L V L + + YN ++ + + K EM+ G++ L +Y+
Sbjct: 301 KL-------VDSMRLSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYN 353
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+ + KS + A + EM+ G+ D++ YN+++ + + A+ + ++R
Sbjct: 354 AIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRA 413
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL-- 299
G P+V+T NT+I C G + EA + EM ++GC PDV TY K R +
Sbjct: 414 GLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMA 473
Query: 300 -GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
FD M+ G++P Y + G F + + M G PD YN ++D
Sbjct: 474 REFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDG 533
Query: 359 LIDKGMLDMARKYDEEMFAKGLS 381
L G L A+ +M + GL
Sbjct: 534 LCKTGNLKDAKDLKMKMVSDGLQ 556
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 118/262 (45%), Gaps = 8/262 (3%)
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
LC + V G+ + N +LR + W R + EM + + + +Y+
Sbjct: 191 LCLAAFRVVACHGVAP--DVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNT 248
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKK--GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+D K G+ +A L KEM+ + G ++ V YN VI + ++ A ++ MR
Sbjct: 249 LLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMR- 307
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG 300
+ + S T N +I L E G V++ A+ EM +G +P ++TY+ L K ++
Sbjct: 308 LSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEA 367
Query: 301 L---FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
F M G+ P + TY +L + + G L+ + + G +P YN L+D
Sbjct: 368 AQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLID 427
Query: 358 ALIDKGMLDMARKYDEEMFAKG 379
G L+ AR+ EEM +G
Sbjct: 428 GYCRLGGLEEARRLKEEMVEQG 449
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 6/179 (3%)
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
G+ DV N V+R + + D VYREM ++ +P++VT NT++ + GR EA
Sbjct: 203 GVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEA 262
Query: 267 YAVLAEMPKK--GCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
+L EM + GC+ + +TY+ L + + L D M S + TY L+
Sbjct: 263 SMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSK-KASSFTYNPLI 321
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
GF++ V + +ME G P YNA++ L+ ++ A+ EM A GL
Sbjct: 322 TALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGL 380
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 6/195 (3%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWG 159
D V+Y ++D LC+ ++ +A++L + K V GL T Y ++ +
Sbjct: 523 DTVTYNVIIDGLCKTGNLKDAKDL---KMKMVS-DGLQPDCIT--YTCLIHAHCERGLLS 576
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+ R+ M G+ + +Y+I + C+ G + A +++M GI+ + + YN +I
Sbjct: 577 EARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLI 636
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
A+ + A + EM E G P+ T +I C G +A + EM + G
Sbjct: 637 HALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIP 696
Query: 280 PDVITYHCFFRCLEK 294
PD T++ F+ +K
Sbjct: 697 PDYCTHNALFKGFDK 711
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 70/177 (39%), Gaps = 8/177 (4%)
Query: 230 FAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF 289
+ +R + G P V CN V+++L + R + AV EM + P ++TY+
Sbjct: 191 LCLAAFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLL 250
Query: 290 RCLEK---PREILGLFDRMIESGIRPKMD--TYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
K E L M G ++ TY +++ R G L + M L
Sbjct: 251 DSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSM-RLS 309
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
F YN L+ AL+++G + EM +G+ P ++ G L EQ
Sbjct: 310 KKASSFTYNPLITALLERGFVQKVEALQMEMENEGI--MPTLVTYNAIIHGLLKSEQ 364
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 159/342 (46%), Gaps = 11/342 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +ID L + D + L +M+ + S P+ T+ + ++ + +N+
Sbjct: 307 TYTVLIDALCAAGKLDKAKELYVKMRASSHS-PDRVTYITLMDKFGKVGDLETVKRFWNE 365
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
++ G D V+Y L++ALC+ V A ++ F L YN ++ G
Sbjct: 366 MEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNL------HTYNTMICG 419
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + E E M+ GV SY +++D KSG P KA+ ++ MKK+GI
Sbjct: 420 LLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPS 479
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ A N + + + + A ++ ++ + G P VT N ++K + G++ +A +L+
Sbjct: 480 IAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLS 539
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM KGC PDV+ + L K + +F R+ + P + TY +LL G+ G
Sbjct: 540 EMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEG 599
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
+ ++ M E GC P+ +N+L+D L +D+A K
Sbjct: 600 KILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALK 641
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 162/333 (48%), Gaps = 16/333 (4%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTD-TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+N ++ALE F +++ TH + TYN ++D GK + ++L M+ PN
Sbjct: 809 SNFTEKALELFEDMKSAG--THPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCE-PN 865
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKL--DEFGLKDEVSYCNLVDALCEYKHVIEAQELC 124
T I+ V ++ +N+A+ + +L +F +Y L+D L + +A ++
Sbjct: 866 AITHNIIISALVKSNNLNKALDLYYELMSGDFS-PTPCTYGPLIDGLLKAGRSEQAMKI- 923
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F E + G + IYN+++ G+ K E +++M K G+ DL SY+I +
Sbjct: 924 FEEMLDYGCGP-----NSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILV 978
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ +C +G+ +AV+ ++E+K G+ D V+YN +I +G S +D A+ ++ EM+ G
Sbjct: 979 ECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGIS 1038
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE---KPREILGL 301
P + T N +I L G+V A + E+ G P V TY+ R + +
Sbjct: 1039 PDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSV 1098
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
F +M+ G P +T+ L K+ R G + F
Sbjct: 1099 FKKMMVVGCSPNTETFAQLPNKYPRAGLVHNPF 1131
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 136/286 (47%), Gaps = 8/286 (2%)
Query: 99 KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWW 158
+D+ L+ LC+ K ++AQ + KN+G +E YN ++ G ++
Sbjct: 758 QDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLES-----YNCLMDGLLGSNFT 812
Query: 159 GKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTV 218
K E +E+M G + +Y++ +D KS + K LY EM+ +G + + + +N +
Sbjct: 813 EKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNII 872
Query: 219 IRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGC 278
I A+ S ++ A+ +Y E+ P+ T +I L + GR +A + EM GC
Sbjct: 873 ISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGC 932
Query: 279 VPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFV 335
P+ + Y+ K EI LF +M++ GIRP + +Y +L+ G +
Sbjct: 933 GPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQ 992
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+++++ G PD +YN +++ L LD A EM +G+S
Sbjct: 993 YFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGIS 1038
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 175/413 (42%), Gaps = 49/413 (11%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGK-------FFEFDL-SWNLIHRMKDN 60
+D A +F V +F HTTD N +++IL + F FDL +I+R
Sbjct: 109 SDPNSAFSYFKIVSQLTNFVHTTDACNYMLEILREQRRIEDMVFVFDLMQKKVIYR---- 164
Query: 61 PSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLV---------DA 110
N T+ +FK + A K+ E G + + SY L+ +A
Sbjct: 165 -----NLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLLPGFCNEA 219
Query: 111 LCEYKHVIE-----------AQELCFGENKNVG--FSGLVEMNKTKIYNMILRGWFKMSW 157
L YK +I A + G + + L EM + I +
Sbjct: 220 LKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRA 279
Query: 158 WGKCREF------WEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
G+ R ++EMD G D+ +Y++ +D +C +GK KA +LY +M+ D
Sbjct: 280 LGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPD 339
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V Y T++ G ++ R + EM G P VVT +I+ LC++G V A+ +L
Sbjct: 340 RVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLD 399
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M KG P++ TY+ L K R E L L + M G++P +YV+ + +G+ G
Sbjct: 400 VMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSG 459
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
++ M++ G P A NA + L + G + A ++ GLS
Sbjct: 460 DPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLS 512
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 159/354 (44%), Gaps = 12/354 (3%)
Query: 50 SWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLV 108
+ N+ + N P ++ + + ++ +A+ F + G + +Y L+
Sbjct: 779 AQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLL 838
Query: 109 DALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM 168
DA + K + + +L + E ++ G E N +N+I+ K + K + + E+
Sbjct: 839 DAHGKSKRINKLYDL-YSEMRSRG----CEPNAIT-HNIIISALVKSNNLNKALDLYYEL 892
Query: 169 DKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV 228
+Y +D + K+G+ +A+K+++EM G + V YN +I G S +
Sbjct: 893 MSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEI 952
Query: 229 DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
DFA ++++M + G +P + + +++ LC GR+ EA E+ G PD ++Y+
Sbjct: 953 DFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFI 1012
Query: 289 FRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
L K R E L LF M GI P + TY L+ G G + ++++++ +G
Sbjct: 1013 INGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGL 1072
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR--EELGTKLVQGGL 397
P F YNAL+ G D A ++M G S +L K + GL
Sbjct: 1073 EPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGL 1126
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 130/282 (46%), Gaps = 9/282 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + D RA + + + T F + TYN++I L K D + L+ M ++ P
Sbjct: 386 CKSGDVDRAFDMLDVMTTKGIFPNL-HTYNTMICGLLKARRLDEALELLENM-ESLGVKP 443
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNL-VDALCEYKHVIEAQELC 124
++ + Y + +A+ TF + + G+ ++ CN + L E + EA+++
Sbjct: 444 TAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDI- 502
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F + G S + YNM+++ + K K + EM +G D+ + +
Sbjct: 503 FNDLHKCGLSP-----DSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLI 557
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ + K+G+ A K++ +K + VV YN ++ +G + A+ ++ M E GC
Sbjct: 558 NTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCP 617
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
P+ +T N+++ L +N V A + M C PDV+TY+
Sbjct: 618 PNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYN 659
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 88/419 (21%), Positives = 165/419 (39%), Gaps = 87/419 (20%)
Query: 42 GKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE 101
G+ E + +N +H+ +P S+ T+ ++ K Y A +++A +++ G + +
Sbjct: 494 GRISEAEDIFNDLHKCGLSPDSV----TYNMLMKCYSKAGQIDKATQLLSEMISKGCEPD 549
Query: 102 VSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGK 160
V N L++ L + V A ++ FG KN+ + V YN++L G K K
Sbjct: 550 VMIINSLINTLYKAGRVDAAWKM-FGRLKNLKLAPTV-----VTYNILLTGLGKEGKILK 603
Query: 161 CREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIR 220
E + M + G + +++ +D + K+ A+K++ M DV+ YNT+I
Sbjct: 604 ALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIY 663
Query: 221 AVGVSEG-----------------------------------VDFAMRVYREMREMGCQP 245
+ + EG V+ A++V E C
Sbjct: 664 GL-IREGRIDYAFWFFHQMKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQ 722
Query: 246 S--------------------------VVTCNTV----------IKLLCENGRVREAYAV 269
+ ++ CN+V IK+LC+ + +A V
Sbjct: 723 TNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNV 782
Query: 270 LAEMPKK-GCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ K G P + +Y+C L + L LF+ M +G P TY +LL G
Sbjct: 783 FDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHG 842
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
+ + ++ ++ +M GC P+ +N ++ AL+ L+ A E+ + S P
Sbjct: 843 KSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTP 901
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 148/310 (47%), Gaps = 10/310 (3%)
Query: 90 FNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
+++ E G++ D +SY +V LCE A +L + V SG N YN +
Sbjct: 178 LHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLL---HTMVKKSGGCSPNVVT-YNTV 233
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G F+ K + EM ++GVV D+ +Y+ +D +CK+ KA + ++M G
Sbjct: 234 IHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGF 293
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ + V YN +I +S ++REM G P++VTCN+ + LC++G+ +EA
Sbjct: 294 QPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAE 353
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFG 325
M KG P+++TY ++L LF+ M +GI + +++ +G
Sbjct: 354 FFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYG 413
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
+ G + +++ +M+E G PD Y ++ A G L A +M A GL KP
Sbjct: 414 KRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGL--KPE 471
Query: 386 EELGTKLVQG 395
+ L+QG
Sbjct: 472 GIVYHSLIQG 481
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 158/353 (44%), Gaps = 12/353 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY S+ID L K D + ++ +M N PN T+ M Y + E G F +
Sbjct: 264 TYTSIIDALCKARAMDKAELVLRQMISNGFQ-PNKVTYNCMIHGYSISGQWKETAGMFRE 322
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ GL + CN + +LC++ EA E LV Y+++L G
Sbjct: 323 MTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVT------YSVLLHG 376
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + + M+ G+V D ++I +D K G + + ++ +M+++G+ D
Sbjct: 377 YATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPD 436
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
Y VI A + AM + +M MG +P + +++I+ C +G + +A +++
Sbjct: 437 ACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVS 496
Query: 272 EMPKKGCV-PDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGRW 327
EM +G P+++ ++ L K ++ +FD +I G RP + T+ L+ +G
Sbjct: 497 EMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLV 556
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G + F V M G PD +YN L+D G +D EM +KG+
Sbjct: 557 GKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGV 609
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 164/391 (41%), Gaps = 36/391 (9%)
Query: 15 LEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
L FN +E + +N VID GK D + + +M++ IP+ T+ I+
Sbjct: 387 LNLFNSMEGN-GIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQ-GVIPDACTYGIVI 444
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELC-------FG 126
+ + +AM FN++ GLK E + Y +L+ C + ++++A+EL
Sbjct: 445 AAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIP 504
Query: 127 ENKNVGFSGLV-----------------------EMNKTKIYNMILRGWFKMSWWGKCRE 163
V F+ ++ E +N ++ G+ + K
Sbjct: 505 RPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFG 564
Query: 164 FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
+ M G+ D+ SY+ +D C++G+ + L+ EM KG+K + Y ++ +
Sbjct: 565 VLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLF 624
Query: 224 VSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVI 283
A ++ EM E G + TC ++ LC N EA A+ ++ ++
Sbjct: 625 NDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIA 684
Query: 284 TYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
+ + K R E LFD + +G+ P TY ++++ + G + ++ M
Sbjct: 685 IINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLM 744
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMARKY 371
E+ GC+P N ++ L++KG + A Y
Sbjct: 745 EKSGCAPSSRLLNYIIRVLLEKGEIVKAGNY 775
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 108/226 (47%), Gaps = 9/226 (3%)
Query: 161 CREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIR 220
CRE E R + + +Y+I MD C++ +P L+ K G+KMDV+ + +++
Sbjct: 106 CRE---EARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLK 162
Query: 221 AV-GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK--G 277
+ D + M E+G +P ++ NTV+K LCE+ R + A +L M KK G
Sbjct: 163 CLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGG 222
Query: 278 CVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
C P+V+TY+ L + E+ LF M++ G+ P + TY ++ + +
Sbjct: 223 CSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAE 282
Query: 335 VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+V ++M G P++ YN ++ G EM ++GL
Sbjct: 283 LVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGL 328
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 167/383 (43%), Gaps = 19/383 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C K A EFF+ + H + TY+ ++ F NL + M+ N +
Sbjct: 343 CKHGKSKEAAEFFDSMAAKGHKPNLV-TYSVLLHGYATEGCFVDMLNLFNSMEGN-GIVA 400
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELC 124
+ F I+ Y +++E M F ++ E G + D +Y ++ A + +A +
Sbjct: 401 DQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMD-- 458
Query: 125 FGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVK-DLHSY 180
F+ ++ M + +Y+ +++G+ K +E EM RG+ + ++ +
Sbjct: 459 -------KFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFF 511
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ ++ +CK G+ +A ++ + G + DV+ +N++I G+ ++ A V M
Sbjct: 512 NSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMIS 571
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG 300
G +P VV+ NT+I C NGR+ + + EM KG P ITY L +G
Sbjct: 572 AGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVG 631
Query: 301 ---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ MIESG + T ++L R ++KK+ + + N ++D
Sbjct: 632 AKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMID 691
Query: 358 ALIDKGMLDMARKYDEEMFAKGL 380
A+ + A++ + + A GL
Sbjct: 692 AMYKVRKREEAKELFDSISATGL 714
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 132/302 (43%), Gaps = 17/302 (5%)
Query: 34 YNSVIDIL---GKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
+NS+I+ L G+ E ++ + + + P I TF + Y + +A G
Sbjct: 511 FNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVI----TFNSLIDGYGLVGKIEKAFGVL 566
Query: 91 NKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+ + G++ D VSY L+D C + + L FGE + G T Y +IL
Sbjct: 567 DAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLIL-FGEMLSKGVK-----PTTITYGIIL 620
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G F ++ EM + G D+ + I + +C++ +A+ ++K++ +K
Sbjct: 621 HGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVK 680
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
++ NT+I A+ + A ++ + G P+ T +IK L + G V EA +
Sbjct: 681 FNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNM 740
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIE-SGIRPKMD--TYVMLLRKFGR 326
+ M K GC P + R L + EI+ + M + G R ++ T +L+ F R
Sbjct: 741 FSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSR 800
Query: 327 WG 328
G
Sbjct: 801 EG 802
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 180/391 (46%), Gaps = 22/391 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDIL---GKFFEFD-LSWNLIHRMKDNP 61
C + W++A FN + D T + +ID+L GK E + L +I R
Sbjct: 504 CLSGKWEKAKCLFNEM-LDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQR----- 557
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYC-NLVDALCEYKHVIEA 120
I + T + K H +++A F K+ + G V C L+ LC+ ++ A
Sbjct: 558 GCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIA 617
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
EL + G+ Y++I+ G K + RE ++EM GV+ D+ SY
Sbjct: 618 LELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISY 677
Query: 181 SIYMDIMCKSGKPWKAVK-LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
+ + C+SGK WK K L+ EM G++ DV ++ +I + V A + M
Sbjct: 678 TSLIHGFCRSGK-WKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMI 736
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI- 298
+ GC P+ VT T++K LC N R+ EA + +M K GC+PDV+TY + L + I
Sbjct: 737 QRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIK 796
Query: 299 --LGLFDRMIE------SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF 350
L L +M+ + +P + +Y +++ + G ++K+M+ LG P+
Sbjct: 797 TALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVI 856
Query: 351 AYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+Y +L+ G L+ A+ EM +G+
Sbjct: 857 SYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQ 887
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 170/389 (43%), Gaps = 56/389 (14%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDIL---GKFFEFD-LSWNLIHRMKDNP 61
C++ W++A FN + D T +ID+ GK E + L ++HR
Sbjct: 211 CHSGKWEKAKCLFNEM-LDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHR----- 264
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA 120
I + T+ + K H ++EA F + + G + D ++Y L+ LC+ +
Sbjct: 265 GCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKI--- 321
Query: 121 QELCFGENKNVGFSGLVEM-NKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
N+ EM N T Y + KC + D+ +
Sbjct: 322 ---------NIALHLHQEMLNDTSQYGI------------KC-----------IRPDVTT 349
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
S+ +DI+CK GK +A +L + M ++G +D+V Y+T+I+ + + + A ++ M+
Sbjct: 350 SSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQ 409
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG------CVPDVITYHCFFRCLE 293
++GC+P +T T++K LC+ G + A + EM C P +I+Y L
Sbjct: 410 KLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLC 469
Query: 294 KPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF 350
K R E LF+ M GI P + +Y L+ F G ++ +M ++G PD
Sbjct: 470 KDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVT 529
Query: 351 AYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ L+D L KG + A K E + +G
Sbjct: 530 TSSVLIDMLCKKGKVIEANKLLEVVIQRG 558
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 172/378 (45%), Gaps = 58/378 (15%)
Query: 33 TYNSVIDIL---GKFFEFD-LSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
T + +IDIL GK E + L +I R I + T+ + K H ++EA
Sbjct: 349 TSSMLIDILCKEGKVIEANELLEVMIQR-----GCILDIVTYSTLIKGLCMEHRISEATW 403
Query: 89 TFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEM-NKTKIYN 146
F + + G + D ++Y L+ LC+ ++ N+ EM N T Y
Sbjct: 404 LFMSMQKLGCRPDAITYGTLMKGLCQTGNI------------NIALQLHQEMLNDTGRYG 451
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
+ KC+ L SYSI +D +CK + +A +L++EMK +
Sbjct: 452 I------------KCKP------------TLISYSIIIDGLCKDRREDEARELFEEMKAQ 487
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
GI DV++Y T+I +S + A ++ EM ++G QP V T + +I +LC+ G+V EA
Sbjct: 488 GIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEA 547
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRK 323
+L + ++GC+ DV+T + L + + LF +M + G P + T L++
Sbjct: 548 NKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKG 607
Query: 324 FGRWGFLRPVFVVWKKMEE------LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
+ G ++ + K M + C P+ +Y+ ++D L G D AR+ +EM
Sbjct: 608 LCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEM-- 665
Query: 378 KGLSAKPREELGTKLVQG 395
K L P T L+ G
Sbjct: 666 KALGVIPDVISYTSLIHG 683
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 160/363 (44%), Gaps = 57/363 (15%)
Query: 33 TYNSVIDIL---GKFFEFD-LSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
T + +IDIL GK E + L +I R I + T+ + K H ++EA
Sbjct: 56 TSSMLIDILCKEGKVIEANELLEVMIQR-----GCILDIVTYSTLIKGLCMEHRISEATW 110
Query: 89 TFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEM-NKTKIYN 146
F + + G + D ++Y L+ LC+ ++ N+ EM N T Y
Sbjct: 111 LFMSMQKLGCRPDAITYGTLMKGLCQTGNI------------NIALQLHQEMLNDTGRYG 158
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
+ KC+ L SYSI +D +CK + +A +L+KEMK +
Sbjct: 159 I------------KCKP------------TLISYSIIIDGLCKDRREDEARELFKEMKAQ 194
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
G+ DV++Y ++I S + A ++ EM ++G QP V T +I + C+ G+V EA
Sbjct: 195 GMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEA 254
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRK 323
+L M +GC+ D++TY + L + E LF M + G RP Y L++
Sbjct: 255 NELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKG 314
Query: 324 FGRWGFLRPVFVVWKKMEE------LGC-SPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
+ G + + ++M + C PD + L+D L +G + A + E M
Sbjct: 315 LCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMI 374
Query: 377 AKG 379
+G
Sbjct: 375 QRG 377
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 110/228 (48%), Gaps = 18/228 (7%)
Query: 170 KRGVVKDLHSYSI---------YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIR 220
+RG + D+ +YSI +DI+CK GK +A +L + M ++G +D+V Y+T+I+
Sbjct: 38 RRGYIPDIVTYSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIK 97
Query: 221 AVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG--- 277
+ + + A ++ M+++GC+P +T T++K LC+ G + A + EM
Sbjct: 98 GLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRY 157
Query: 278 ---CVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
C P +I+Y L K R E LF M G+ P + +Y L+ F G
Sbjct: 158 GIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWE 217
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++ +M ++G PD L+D +G + A + E M +G
Sbjct: 218 KAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRG 265
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 145/316 (45%), Gaps = 26/316 (8%)
Query: 6 CYANDWKRALEFFNWVETDC-----HFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDN 60
C + + K ALE + +D + +Y+ +ID L K D + L MK
Sbjct: 609 CQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMK-A 667
Query: 61 PSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIE 119
IP+ ++ + + + +A FN++ + G++ +V+ + L+D LC+ VIE
Sbjct: 668 LGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIE 727
Query: 120 AQELCFGENKNVGFSGLVE---MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
A EL +++ + T Y +++G + + + +M K G + D
Sbjct: 728 ANEL---------LEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPD 778
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKK------KGIKMDVVAYNTVIRAVGVSEGVDF 230
+ +Y M +C++G A++L+K+M K DV++Y+ +I + D
Sbjct: 779 VVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDE 838
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR 290
A +++EM+ +G P+V++ ++I C +G++ +A + EM +G + +TY
Sbjct: 839 ARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIH 898
Query: 291 CLEKPREI-LGLFDRM 305
K +I LF +M
Sbjct: 899 GFCKEGQIDKALFQKM 914
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 98/218 (44%), Gaps = 35/218 (16%)
Query: 172 GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFA 231
G+ D +++I ++ +C + + + + ++G D+V Y+
Sbjct: 5 GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSI-------------- 50
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR- 290
+P V T + +I +LC+ G+V EA +L M ++GC+ D++TY +
Sbjct: 51 ------------RPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKG 98
Query: 291 -CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE------ 342
C+E + E LF M + G RP TY L++ + G + + ++M
Sbjct: 99 LCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYG 158
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ C P +Y+ ++D L D AR+ +EM A+G+
Sbjct: 159 IKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGM 196
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 71/163 (43%), Gaps = 16/163 (9%)
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF--------- 288
MR G P T N +I LC RV E A +A + ++G +PD++TY
Sbjct: 1 MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60
Query: 289 --FRCLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
C E K E L + MI+ G + TY L++ + ++ M++LGC
Sbjct: 61 IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAK----GLSAKP 384
PD Y L+ L G +++A + +EM G+ KP
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKP 163
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 165/365 (45%), Gaps = 26/365 (7%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
+ H TYN ++ L + D + + M D S P+ TF I+ + ++ + +A
Sbjct: 3 YEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDK-SCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 87 MGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK-- 143
++ E G + D+ Y L+ + K FG+ F L EM K
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKD--------FGQ----AFKFLAEMVKNHCL 109
Query: 144 ----IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKL 199
Y I+ G K + +EM +G ++++Y++ ++ +C+ K +A K+
Sbjct: 110 PTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKM 169
Query: 200 YKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCE 259
+EM +G DVV YN+ I+ + + VD A + + M P VV+ TVI LC+
Sbjct: 170 LEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF---LARMPVTPDVVSYTTVINGLCK 226
Query: 260 NGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDT 316
+G + A +L M +GC PDV+TY K E+ +GL D M++ G RP M
Sbjct: 227 SGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVA 286
Query: 317 YVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
Y LL R G + + +ME G +PD +YNA +D L + A+ + M
Sbjct: 287 YNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMV 346
Query: 377 AKGLS 381
+G +
Sbjct: 347 ERGCT 351
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 170/362 (46%), Gaps = 29/362 (8%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN++I K +F ++ + M N +P T+ + A +A+ +++
Sbjct: 80 YNALISGYSKAKDFGQAFKFLAEMVKN-HCLPTVVTYTNIVDGLCKAERTRDAVKLLDEM 138
Query: 94 DEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ G + +Y +V+ LCE + + EA+++ F +V YN ++G
Sbjct: 139 RDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVV------TYNSFIKGL 192
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K + R+F M V D+ SY+ ++ +CKSG A ++ M +G DV
Sbjct: 193 CKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDV 249
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V Y+++I V+ AM + M ++GC+P++V N+++ L G + +A +L E
Sbjct: 250 VTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVE 309
Query: 273 MPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVML--------- 320
M ++G PDV++Y+ L E+ ++ +FDRM+E G P +Y ML
Sbjct: 310 MERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTV 369
Query: 321 ----LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
L K GR+ +F K ++E C PD F YN ++D+ + +D A + ++M
Sbjct: 370 LLDGLCKGGRFDEACALF--SKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQML 427
Query: 377 AK 378
K
Sbjct: 428 EK 429
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 166/424 (39%), Gaps = 66/424 (15%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A D+ +A +F + + H T TY +++D L K + L+ M+D S PN
Sbjct: 90 AKDFGQAFKFLAEMVKN-HCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCS-PNI 147
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFG 126
T+ ++ + ++EA ++ G D V+Y + + LC+ V EA++
Sbjct: 148 YTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF--- 204
Query: 127 ENKNVGFSGLVEMNKTK---IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
L M T Y ++ G K + M RG D+ +YS
Sbjct: 205 ---------LARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSL 255
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D CK G+ +A+ L M K G + ++VAYN+++ A+ + A + EM G
Sbjct: 256 IDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGF 315
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVP----------DVITYHCFFRCLE 293
P VV+ N I LC+ RV++A AV M ++GC P D++ Y L
Sbjct: 316 TPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLC 375
Query: 294 KP---REILGLFDRMIESGI-RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS--- 346
K E LF ++++ I P + Y ++L + + + K+M E C
Sbjct: 376 KGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCCNVV 435
Query: 347 -------------------------------PDEFAYNALVDALIDKGMLDMARKYDEEM 375
PD Y LVDA+ G A + EE
Sbjct: 436 TWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEA 495
Query: 376 FAKG 379
G
Sbjct: 496 VKGG 499
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 143/341 (41%), Gaps = 56/341 (16%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+Y +VI+ L K + D + ++ M N P+ T+ + + V AMG +
Sbjct: 216 SYTTVINGLCKSGDLDSASRMLDHMS-NRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDS 274
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + G + + V+Y +L+ AL H+ +A+++ E + GF+ V YN + G
Sbjct: 275 MLKLGCRPNMVAYNSLLGALHRLGHIGKAEDM-LVEMERRGFTPDVVS-----YNACIDG 328
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYS----------IYMDIMCKSGKPWKAVKLY- 200
K K + ++ M +RG + SYS + +D +CK G+ +A L+
Sbjct: 329 LCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFS 388
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC----------------- 243
K + +K + DV YN ++ + +D A++++++M E C
Sbjct: 389 KVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCCNVVTWNILVHGLCVDD 448
Query: 244 -----------------QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
P VT T++ +C+ G+ A + E K GCVPDV+TY
Sbjct: 449 RLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYS 508
Query: 287 CFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
L E LF +++E P T +L RK
Sbjct: 509 ALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKL 549
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 3/176 (1%)
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
G + +V YN ++ + D A V++EM + CQP T +++ LC + ++ +A
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFD---RMIESGIRPKMDTYVMLLRK 323
+L M + GCVPD Y+ K ++ F M+++ P + TY ++
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ R + +M + GCSP+ + YN +V+ L ++ LD A+K EEM +G
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRG 177
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLV--- 83
FT +YN+ ID L K + + RM + + PN +++ ++ + ++
Sbjct: 315 FTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCT-PNASSYSMLIVDILLYTVLLDG 373
Query: 84 -------NEAMGTFNK-LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFS 134
+EA F+K LDE + +V + N ++D+ C+ + + +A ++
Sbjct: 374 LCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQI---------HK 424
Query: 135 GLVEMNKTKI--YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
++E N + +N+++ G M G + D +Y +D MCK GK
Sbjct: 425 QMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGK 484
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
A++L++E K G DVV Y+ +I +
Sbjct: 485 SAAALELFEEAVKGGCVPDVVTYSALITGL 514
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 178/385 (46%), Gaps = 50/385 (12%)
Query: 33 TYNSVIDILGKFFE-FDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
+YN+V+ L + D + L+ M + P ++ + + +A+G
Sbjct: 80 SYNTVLAALCRQGGCLDAALFLLRVMAHE--TRPTAVSYTTLMRALCAERRTGQAVGLLR 137
Query: 92 KLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
+ G++ D V+Y L+ LC+ V +A EL + + SG +E N +Y+ +L+
Sbjct: 138 DMQASGVRPDVVTYGTLIRGLCDAADVDKAVELL----REMCESG-IEPN-VVVYSCLLQ 191
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKD---------------------------------- 176
G+ K W + +EEM RG+ D
Sbjct: 192 GYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEP 251
Query: 177 -LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
+ +Y++ ++ MCK G +A+ L M +KG+ +D V YNT+I + +D AM +
Sbjct: 252 NVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLL 311
Query: 236 REM--REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL- 292
EM E +P+VVT N+VI LC+ GR+R+A+ V M + GC +++T++ L
Sbjct: 312 EEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLL 371
Query: 293 --EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF 350
K ++ + L D M SG+ P TY +L+ F + + + KM G P+
Sbjct: 372 RVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELV 431
Query: 351 AYNALVDALIDKGMLDMARKYDEEM 375
Y L+ AL ++GM++ AR + +EM
Sbjct: 432 HYIPLLAALCEQGMMEQARNFFDEM 456
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 143/285 (50%), Gaps = 13/285 (4%)
Query: 102 VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKC 161
VSY L+ ALC + +A G +++ SG+ Y ++RG + K
Sbjct: 114 VSYTTLMRALCAERRTGQA----VGLLRDMQASGV--RPDVVTYGTLIRGLCDAADVDKA 167
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAV-KLYKEMKKKGIKMDVVAYNTVIR 220
E EM + G+ ++ YS + CK+G+ W+ V K+++EM +GI+ DVV Y +I
Sbjct: 168 VELLREMCESGIEPNVVVYSCLLQGYCKAGR-WECVSKVFEEMSGRGIEPDVVMYTGLID 226
Query: 221 AVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVP 280
++ V A +V +M E G +P+VVT N +I +C+ G V+EA ++ M +KG
Sbjct: 227 SLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVAL 286
Query: 281 DVITYHCFFRCLEKPREI---LGLFDRMI--ESGIRPKMDTYVMLLRKFGRWGFLRPVFV 335
D +TY+ L E+ +GL + MI E+ + P + T+ ++ + G +R F
Sbjct: 287 DAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQ 346
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
V M E GC+ + +N L+ L+ + A + +EM + GL
Sbjct: 347 VRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGL 391
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 15/217 (6%)
Query: 174 VKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMR 233
V+D SY+ + +C+ G A + + V+Y T++RA+ A+
Sbjct: 75 VRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVG 134
Query: 234 VYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--- 290
+ R+M+ G +P VVT T+I+ LC+ V +A +L EM + G P+V+ Y C +
Sbjct: 135 LLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYC 194
Query: 291 ------CLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
C+ K +F+ M GI P + Y L+ R G ++ V KM E G
Sbjct: 195 KAGRWECVSK------VFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERG 248
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
P+ YN L++++ +G + A M KG++
Sbjct: 249 LEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVA 285
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 154/359 (42%), Gaps = 24/359 (6%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
Y +ID L + + + ++ +M + PN T+ ++ V EAM N +
Sbjct: 221 YTGLIDSLCREGKVKKATQVMDKMMERGLE-PNVVTYNVLINSMCKEGSVKEAMSLRNNM 279
Query: 94 DEFGLK-DEVSYCNLVDALCEYKHVIEA----QELCFGENKNVGFSGLVEMNKTKIYNMI 148
E G+ D V+Y L+ L + EA +E+ GE +VE N +N +
Sbjct: 280 LEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGET-------MVEPNVVT-FNSV 331
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G K + + + M + G +L ++++ + + + K KA++L EM G+
Sbjct: 332 IHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGL 391
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ D Y+ +I VD A + +MR G +P +V ++ LCE G + +A
Sbjct: 392 EPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARN 451
Query: 269 VLAEMPKKGCVPDVITYH------CFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLR 322
EM K C DV+ Y C R + E L M++ G+ P TY ML+
Sbjct: 452 FFDEM-HKNCKLDVVAYSTMIHGACRLRDRKSAEEFL---KHMLDEGLIPDSVTYSMLIN 507
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
F G L V K+M G PD +++L+ KG + + EM AK ++
Sbjct: 508 MFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIA 566
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 116/287 (40%), Gaps = 15/287 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+NSVI L K ++ + M +N + N TF ++ + H V +AM ++
Sbjct: 327 TFNSVIHGLCKTGRMRQAFQVRDMMAENGCAC-NLVTFNLLIGGLLRVHKVKKAMELMDE 385
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ GL+ D +Y L++ C+ V A+ L ++ LV Y +L
Sbjct: 386 MASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVH------YIPLLAA 439
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + R F++EM K + D+ +YS + C+ A + K M +G+ D
Sbjct: 440 LCEQGMMEQARNFFDEMHKNCKL-DVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPD 498
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V Y+ +I S + A RV ++M G P V +++IK G + ++
Sbjct: 499 SVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIR 558
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYV 318
EM K D + CL E L + P DT V
Sbjct: 559 EMTAKDIALDSKIISTIYTCLVANNEGKALLQSV------PGFDTEV 599
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 119/237 (50%), Gaps = 3/237 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN +L+G + W K RE + MD GV D+ S+++ + C++G+ +A++ YKEM+
Sbjct: 232 YNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMR 291
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+ + DVV+++ +I +D A REMRE G P V VI C G +
Sbjct: 292 GRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLML 351
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLL 321
EA V EM GC+PDV+TY+ L K R + L + M E G+ P + T+ L+
Sbjct: 352 EALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLI 411
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+ R G + + + + PD YN L+D + +G L A + ++M ++
Sbjct: 412 HGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSR 468
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 177/380 (46%), Gaps = 12/380 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A + + AL F+ + T +++ +I + + E D + + M++ +P
Sbjct: 275 CRAGELEEALRFYKEMRGR-RVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREF-GLMP 332
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELC 124
+ + ++ + A L+ EA+ +++ FG L D V+Y L++ LC+ + + +A+EL
Sbjct: 333 DGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEEL- 391
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
E K G + ++ G+ + K +F++ + + + D+ +Y+ +
Sbjct: 392 LNEMKERGVP-----PDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLI 446
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D MC+ G KA +L+ +M + I + V Y+ +I + VD A EM G
Sbjct: 447 DGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIV 506
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGL 301
P+++T N++IK C +G V + L +M +PD+ITY+ K E L
Sbjct: 507 PNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNL 566
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
M ++P TY M++ F G ++ V+KKM G PD + Y ++++ +
Sbjct: 567 LKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVV 626
Query: 362 KGMLDMARKYDEEMFAKGLS 381
G + + +EM KGL+
Sbjct: 627 AGNSKKSFQLHDEMLQKGLA 646
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 114/253 (45%), Gaps = 23/253 (9%)
Query: 141 KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
T N+++ + K +G+ EM+KR V D+ ++++ +D ++G A+ L
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALI 217
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
M KGIK +V YN+V++ + + D A V+R M G P V + N +I C
Sbjct: 218 DSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRA 277
Query: 261 GRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDR-------------MIE 307
G + EA EM + PDV+++ C ++GLF R M E
Sbjct: 278 GELEEALRFYKEMRGRRVTPDVVSFSC----------LIGLFTRRGEMDHAAEYLREMRE 327
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
G+ P Y M++ F R G + V +M GC PD YN L++ L + L
Sbjct: 328 FGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSD 387
Query: 368 ARKYDEEMFAKGL 380
A + EM +G+
Sbjct: 388 AEELLNEMKERGV 400
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 163/390 (41%), Gaps = 52/390 (13%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNSV+ L + +D + + R D P+ +F ++ + A + EA+ + +
Sbjct: 231 TYNSVLKGLLRNGRWDKARE-VFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKE 289
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + D VS+ L+ + A E E + G M IY M++ G
Sbjct: 290 MRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEY-LREMREFGL-----MPDGVIYTMVIGG 343
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + + +EM G + D+ +Y+ ++ +CK + A +L EMK++G+ D
Sbjct: 344 FCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPD 403
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLL-------------- 257
+ + T+I ++ A++ + + + +P +VT NT+I +
Sbjct: 404 LCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWD 463
Query: 258 ---------------------CENGRVREAYAVLAEMPKKGCVPDVITY------HCFFR 290
CE G+V A+A L EM KG VP+++TY +C
Sbjct: 464 DMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSG 523
Query: 291 CLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF 350
+ K ++ L +M + P + TY L+ + + G + F + K ME PD
Sbjct: 524 NVSKGQQFL---PKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAV 580
Query: 351 AYNALVDALIDKGMLDMARKYDEEMFAKGL 380
YN ++ G + A ++M A+G+
Sbjct: 581 TYNMIISGFSVHGNMQEADWVYKKMGARGI 610
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 157/340 (46%), Gaps = 22/340 (6%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ I+ + V +AM +++ G K D V+Y LV+ +C+ + EA +
Sbjct: 14 PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73
Query: 124 -----CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
+G NV +N+ILR W + EM ++G +
Sbjct: 74 LNSMPSYGSQPNV-----------ITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVV 122
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+++I ++ +C+ G +A+ + ++M G + ++YN ++ + +D A++ M
Sbjct: 123 TFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIM 182
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE---KP 295
GC P +VT NT++ LC++G+V A +L ++ KGC P +ITY+ L K
Sbjct: 183 VSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKT 242
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
+ + L M G++P + TY L+ R G + + +E G P+ F YN++
Sbjct: 243 DQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSI 302
Query: 356 VDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+ L D A + M +KG KP E T L++G
Sbjct: 303 MFGLCKAQQTDRAIDFLAYMISKG--CKPTEVSYTILIEG 340
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 126/276 (45%), Gaps = 11/276 (3%)
Query: 6 CYANDWKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C W A + V C + + T+N +I+ L + + +++ +M + +
Sbjct: 97 CSTGRWMDAEKLLTEMVRKGC--SPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCT- 153
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
PN ++ + + ++ A+ + G D V+Y ++ ALC+ V A EL
Sbjct: 154 PNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVEL 213
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ + G S ++ YN ++ G K+ + E EM +G+ D+ +YS
Sbjct: 214 -LNQLSSKGCSPVL-----ITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSL 267
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ + + GK +A+K + +++ G+K + YN+++ + ++ D A+ M GC
Sbjct: 268 IAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGC 327
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
+P+ V+ +I+ + G +EA +L E+ +G V
Sbjct: 328 KPTEVSYTILIEGIANEGLAKEALELLNELCSRGVV 363
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR- 290
M V E C P V+T +I+ C V +A +L EM +GC PDV+TY+
Sbjct: 1 MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60
Query: 291 -CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKF---GRWGFLRPVFVVWKKMEELGC 345
C E + E + + M G +P + T+ ++LR GRW + +M GC
Sbjct: 61 MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLT---EMVRKGC 117
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
SP +N L++ L KG+L A E+M G
Sbjct: 118 SPSVVTFNILINFLCRKGLLGRAIDILEKMPTHG 151
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 93/217 (42%), Gaps = 11/217 (5%)
Query: 6 CYANDWKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C RA+++ V C+ TYN+++ L K + D + L++++ S
Sbjct: 167 CKEKKMDRAIQYLEIMVSRGCY--PDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCS- 223
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P T+ + ++A+ +++ GLK D ++Y +L+ L V EA +
Sbjct: 224 PVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKF 283
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + + G V+ N YN I+ G K + +F M +G SY+I
Sbjct: 284 -FHDVEGFG----VKPNAFT-YNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTIL 337
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIR 220
++ + G +A++L E+ +G+ A V+R
Sbjct: 338 IEGIANEGLAKEALELLNELCSRGVVKKSSAEQVVVR 374
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 145/324 (44%), Gaps = 41/324 (12%)
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+D+ D ++ L+ LC + +A++L G K +G + IYN ++ G+
Sbjct: 2 IDKSCQPDAFTFAILLRGLCRSNQLEKARQL-LGRMKEMGC-----VPDDAIYNALISGY 55
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K +G+ +F EM K + + +Y+ +D +CK+G+ AVKL EM+ KG ++
Sbjct: 56 SKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNI 115
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
YN ++ + +D A ++ EM G P VVT N+ IK LC+ RV EA LA
Sbjct: 116 YTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLAR 175
Query: 273 MP--------------------------------KKGCVPDVITYHCFFRCLEKPREI-- 298
MP +GC PDV+TY K E+
Sbjct: 176 MPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVER 235
Query: 299 -LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+GL D M++ G RP M Y LL R G + + +ME G +PD +YNA +D
Sbjct: 236 AMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACID 295
Query: 358 ALIDKGMLDMARKYDEEMFAKGLS 381
L + A+ + M +G +
Sbjct: 296 GLCKAERVKKAKAVFDRMVERGCT 319
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 168/368 (45%), Gaps = 17/368 (4%)
Query: 6 CYANDWKRALEFFNWV-ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C +N ++A + + E C YN++I K +F ++ + M N +
Sbjct: 21 CRSNQLEKARQLLGRMKEMGC--VPDDAIYNALISGYSKAKDFGQAFKFLAEMVKN-HCL 77
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
P T+ + A +A+ +++ + G + +Y +V+ LCE + + EA+++
Sbjct: 78 PTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKM 137
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F +V YN ++G K + R+F M V D+ SY+
Sbjct: 138 LEEMAVRGYFPDVV------TYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTV 188
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
++ +CKSG A ++ +M +G DVV Y+++I V+ AM + M ++GC
Sbjct: 189 INGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGC 248
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILG 300
+P++V N+++ L G + +A +L EM ++G PDV++Y+ L E+ ++
Sbjct: 249 RPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKA 308
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+FDRM+E G P +Y ML+ + + L + ++ E D Y L+D L
Sbjct: 309 VFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLC 368
Query: 361 DKGMLDMA 368
G D A
Sbjct: 369 KGGRFDEA 376
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 161/341 (47%), Gaps = 13/341 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+Y +VI+ L K + D + ++ +M N P+ T+ + + V AMG +
Sbjct: 184 SYTTVINGLCKSGDLDSASRMLDQMT-NRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDS 242
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + G + + V+Y +L+ AL H+ +A+++ E + GF+ V YN + G
Sbjct: 243 MLKLGCRPNMVAYNSLLGALHRLGHIGKAEDM-LVEMERRGFTPDVVS-----YNACIDG 296
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K K + ++ M +RG + SYS+ ++ +CK + A+ L ++ ++K +D
Sbjct: 297 LCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVD 356
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYRE-MREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
++ Y ++ + D A ++ + + E C+P V N ++ C+ ++ +A +
Sbjct: 357 ILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIH 416
Query: 271 AEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
+M ++ C +V+T++ L ++ + + M++ G P TY L+ +
Sbjct: 417 KQMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKC 475
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G ++++ + GC PD Y+AL+ L+ + M + A
Sbjct: 476 GKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEA 516
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 159/372 (42%), Gaps = 42/372 (11%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
YNS++ L + + +++ M + P+ ++ A V +A F++
Sbjct: 254 AYNSLLGALHRLGHIGKAEDMLVEM-ERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDR 312
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G + SY LV+ LC+ K + +A L + ++ +Y ++L G
Sbjct: 313 MVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDIL------LYTVLLDG 366
Query: 152 WFKMSWWGK-CREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
K + + C F + +D++ D+ Y++ +D CK + KA++++K+M ++
Sbjct: 367 LCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC-C 425
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
+VV +N ++ + V + + A + M + G P VT T++ +C+ G+ A +
Sbjct: 426 NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELF 485
Query: 271 AEMPKKGCVPDVITYHCFFRCL--EKPRE-----------------ILG----------- 300
E K GCVPDV+TY L E E ILG
Sbjct: 486 EEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLDVALWNAMILGYAENGSGDLGL 545
Query: 301 -LFDRMIESGIRPKMDTYVMLLR-KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
LF +IES + P T+ + K + L ++ + + G PD F N L+D
Sbjct: 546 KLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDV 605
Query: 359 LIDKGMLDMARK 370
G L+ AR+
Sbjct: 606 FAKCGDLEEARR 617
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 3/176 (1%)
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M K + D + ++R + S ++ A ++ M+EMGC P N +I +
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVM 319
+A+ LAEM K C+P V+TY L K ++ + L D M + G P + TY +
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
++ L + ++M G PD YN+ + L +D ARK+ M
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM 176
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 144/349 (41%), Gaps = 34/349 (9%)
Query: 6 CYANDWKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C A K+A F+ VE C T +Y+ +++ L K E D + L+ + ++ I
Sbjct: 298 CKAERVKKAKAVFDRMVERGC--TPNASSYSMLVEELCKKKELDDAITLVEQAREK-YQI 354
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNK-LDEFGLKDEVSYCN-LVDALCEYKHVIEAQE 122
+ + ++ +EA F+K LDE + +V + N ++D+ C+ + + +A +
Sbjct: 355 VDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQ 414
Query: 123 LCFGENKNVGFSGLVEMNKTKI--YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+ ++E N + +N+++ G M G + D +Y
Sbjct: 415 I---------HKQMLERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTY 465
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+D MCK GK A++L++E K G DVV Y+ +I + + A ++ ++
Sbjct: 466 GTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL-- 523
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH-------CFFRCLE 293
V N +I ENG + E+ + P+ T+ L
Sbjct: 524 -----DVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLG 578
Query: 294 KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE 342
K R GLFDR ++ G P + L+ F + G L ++ M++
Sbjct: 579 KAR---GLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMKQ 624
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 172/379 (45%), Gaps = 38/379 (10%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+ I +LG+ + D ++ + RM D P+ T+ ++ A + A F K
Sbjct: 264 TFTICIRVLGRAGKIDEAYEIFRRMDDEGCG-PDLVTYTVLIDALCNAGQLENAKELFVK 322
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQE-----------------------LCFGEN 128
+ G K D+V Y L+D ++ + +E LC +
Sbjct: 323 MKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARD 382
Query: 129 KNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ F+ M K I YN ++ G + + M+ GV ++Y+I
Sbjct: 383 FDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNI 442
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++D KSG+ KAV+ +++MK KGI ++VA N + ++ + A ++ +RE G
Sbjct: 443 FIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENG 502
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REIL 299
P VT N ++K + G+V EA +L+EM + GC PDVI + L K E
Sbjct: 503 LAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAW 562
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+FDRM + + P + TY LL G+ G ++ +++ M E CSP+ ++N L+D
Sbjct: 563 QMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCF 622
Query: 360 IDKGMLDMARKYDEEMFAK 378
+++A K MF+K
Sbjct: 623 CKNDEVELALK----MFSK 637
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 137/292 (46%), Gaps = 11/292 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N ++ + GK + + L M P+ T+ I+ ++ +++A+ F
Sbjct: 825 TFNMLLAVHGKSGKITELFELYKEMISRRCK-PDAITYNIVISSLAKSNNLDKALDFFYD 883
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
L + +Y L+D L + + EA L F E + G I+N+++ G
Sbjct: 884 LVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRL-FEEMSDYGCKP-----NCAIFNILING 937
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K+ + ++ M G+ DL SY+I +D +C +G+ +A+ + E+K G+ D
Sbjct: 938 YGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPD 997
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+AYN +I +G S+ ++ A+ +Y EMR G P + T N+++ L G V +A +
Sbjct: 998 FIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYE 1057
Query: 272 EMPKKGCVPDVITYHCFFR---CLEKPREILGLFDRMIESGIRPKMDTYVML 320
E+ G PDV TY+ R E P ++ M+ G P + TY L
Sbjct: 1058 ELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 115/228 (50%), Gaps = 18/228 (7%)
Query: 155 MSWWGKCREF---WEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+S G R+ +M K G V + +SY+ + ++ +SG +A+++Y+ M +G+K
Sbjct: 167 LSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPS 226
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ Y+ ++ A+G + M + +EM ++G +P+V T I++L G++ EAY +
Sbjct: 227 LKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFR 286
Query: 272 EMPKKGCVPDVITYH------CFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
M +GC PD++TY C LE +E LF +M +G +P Y+ LL KF
Sbjct: 287 RMDDEGCGPDLVTYTVLIDALCNAGQLENAKE---LFVKMKANGHKPDQVIYITLLDKFN 343
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDE 373
+G L W +ME G PD + LVD L AR +DE
Sbjct: 344 DFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCK------ARDFDE 385
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 128/277 (46%), Gaps = 8/277 (2%)
Query: 107 LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE 166
LV LC++K + A ++ K +G S + YN ++ ++ + K + ++
Sbjct: 758 LVRVLCKHKRELYAYQIFDKFTKKLGISPTLAS-----YNCLIGELLEVHYTEKAWDLFK 812
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
+M G D ++++ + + KSGK + +LYKEM + K D + YN VI ++ S
Sbjct: 813 DMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSN 872
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
+D A+ + ++ +P+ T +I L + GR+ EA + EM GC P+ ++
Sbjct: 873 NLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFN 932
Query: 287 CFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
K LF RM+ GIRP + +Y +L+ G + + +++
Sbjct: 933 ILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKST 992
Query: 344 GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G PD AYN +++ L ++ A EM +G+
Sbjct: 993 GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGI 1029
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 116/244 (47%), Gaps = 11/244 (4%)
Query: 8 ANDWKRALEFF-NWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+N+ +AL+FF + V +D F T TY +ID L K + + L M D PN
Sbjct: 871 SNNLDKALDFFYDLVSSD--FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCK-PN 927
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCF 125
A F I+ Y A F ++ G++ ++ SY LVD LC V EA F
Sbjct: 928 CAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYY-F 986
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
E K+ G YN I+ G K + + EM RG+V DL++Y+ M
Sbjct: 987 NELKSTGLDP-----DFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLML 1041
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
+ +G +A ++Y+E++ G++ DV YN +IR +SE + A VY+ M GC P
Sbjct: 1042 NLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNP 1101
Query: 246 SVVT 249
++ T
Sbjct: 1102 NIGT 1105
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 98/184 (53%), Gaps = 3/184 (1%)
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
+++ M+KK I+ D+ Y T+ +A+ + G+ V +MR+ G + + N +I LL
Sbjct: 144 VFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLI 203
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE---ILGLFDRMIESGIRPKMD 315
++G EA V M +G P + TY L K R+ ++ L M + G+RP +
Sbjct: 204 QSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVY 263
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
T+ + +R GR G + + ++++M++ GC PD Y L+DAL + G L+ A++ +M
Sbjct: 264 TFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKM 323
Query: 376 FAKG 379
A G
Sbjct: 324 KANG 327
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 3/215 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN+++ K + K +F+ ++ +Y +D + K G+ +A++L++EM
Sbjct: 861 YNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMS 920
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
G K + +N +I G + A ++++ M G +P + + ++ LC GRV
Sbjct: 921 DYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVD 980
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLL 321
EA E+ G PD I Y+ L K + E L L++ M GI P + TY L+
Sbjct: 981 EALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLM 1040
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
G G + ++++++ G PD F YNAL+
Sbjct: 1041 LNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALI 1075
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 172/412 (41%), Gaps = 46/412 (11%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDIL---------GKFFEFDLSWNLIHRMKD 59
D RAL +F + HTT+T N +++ L FEF + +I R D
Sbjct: 100 TDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEF-MQKKIIRRDLD 158
Query: 60 NPSSIPNHATFRIMFKRYVTA--------------------HLV------NEAMGTFNKL 93
+I + R ++ T HL+ EA+ + ++
Sbjct: 159 TYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRM 218
Query: 94 DEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
GLK + +Y L+ AL + K E + E +++G V + + +R
Sbjct: 219 VSEGLKPSLKTYSALMVALGK-KRDSEMVMVLLKEMEDLGLRPNV-----YTFTICIRVL 272
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
+ + E + MD G DL +Y++ +D +C +G+ A +L+ +MK G K D
Sbjct: 273 GRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQ 332
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V Y T++ +D + +M G P VVT ++ +LC+ EA+A
Sbjct: 333 VIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDV 392
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M K+G +P++ TY+ L + I L L M G++P TY + + FG+ G
Sbjct: 393 MRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGE 452
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
++KM+ G P+ A NA + +L + G L A+ + GL+
Sbjct: 453 TGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLA 504
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 135/294 (45%), Gaps = 9/294 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A D+ A F+ + TYN++I L + + + L+ M ++ P
Sbjct: 378 CKARDFDEAFATFDVMRKQ-GILPNLHTYNTLICGLLRAGRIEDALKLLGTM-ESVGVQP 435
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNL-VDALCEYKHVIEAQELC 124
T+ I + + +A+ TF K+ G+ + CN + +L E + EA+ +
Sbjct: 436 TAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMF 495
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
G +N GL + T YNM+++ + K+ + EM + G D+ + +
Sbjct: 496 NGLREN----GLAPDSVT--YNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLI 549
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D + K+G+ +A +++ MK + VV YNT++ +G V A+ ++ M E C
Sbjct: 550 DSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCS 609
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI 298
P+ ++ NT++ C+N V A + ++M C PDV+TY+ L K ++
Sbjct: 610 PNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKV 663
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 150/360 (41%), Gaps = 20/360 (5%)
Query: 35 NSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLD 94
NS+ID L K D +W + RMKD S P T+ + V +A+ F +
Sbjct: 546 NSLIDSLYKAGRVDEAWQMFDRMKDMKLS-PTVVTYNTLLSGLGKEGRVQKAIELFESMI 604
Query: 95 EFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIYNMILR 150
E + +S+ L+D C+ V A ++ FS + M+ YN ++
Sbjct: 605 EKKCSPNTISFNTLLDCFCKNDEVELALKM---------FSKMTVMDCKPDVLTYNTVIY 655
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE-MKKKGIK 209
G K + F+ ++ K+ + D + + + K G+ A+ + ++ M + +
Sbjct: 656 GLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFR 714
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
++ + ++ V +D A+ E+ G ++++LC++ R AY +
Sbjct: 715 VNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQI 774
Query: 270 LAEMPKK-GCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ KK G P + +Y+C L + LF M G P T+ MLL G
Sbjct: 775 FDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHG 834
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
+ G + +F ++K+M C PD YN ++ +L LD A + ++ + PR
Sbjct: 835 KSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPR 894
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 158/320 (49%), Gaps = 10/320 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+H F I+ Y V++AM F+K+ + GL + V+Y ++ LC+ V +A L
Sbjct: 369 PDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM-L 427
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + + G S +YN ++ G + W + E EM RG+ + ++
Sbjct: 428 YFEQMIDEGLS-----PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 482
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D CK G+ ++ KL++ M + G+K +V+ YNT+I ++ +D AM++ M +G
Sbjct: 483 IDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGL 542
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG--- 300
+P+ VT +T+I C+ R+ +A + EM G PD+ITY+ + L + R
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 602
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L+ R+ ESG + ++ TY ++L + +++ + + + +N ++DAL+
Sbjct: 603 LYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALL 662
Query: 361 DKGMLDMARKYDEEMFAKGL 380
G D A+ + GL
Sbjct: 663 KVGRNDEAKDLFVAFSSNGL 682
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 147/310 (47%), Gaps = 9/310 (2%)
Query: 90 FNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
++ E G + + SY L+ LC+ EA EL + G ++ Y +
Sbjct: 146 LRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVS---YTTV 202
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G+FK K + EM RG++ D+ +Y+ + +CK+ KA+++ M K G+
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
D + YN+++ S A+ ++MR G +P VVT + ++ LC+NGR EA
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ M K+G P++ TY + E+ GL D M+ +GI P + +L+ +
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
G + +V+ KM + G +P+ Y A++ L G ++ A Y E+M +GLS P
Sbjct: 383 NQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS--PG 440
Query: 386 EELGTKLVQG 395
+ L+ G
Sbjct: 441 NIVYNSLIHG 450
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 173/390 (44%), Gaps = 55/390 (14%)
Query: 50 SWNLIHRMKDN--PSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK-LDEFGLKDEVSYCN 106
+ L+H M D+ S P+ ++ + + ++A T+++ LD L D V+Y +
Sbjct: 177 ALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNS 236
Query: 107 LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE 166
++ ALC+ + + +A E+ KN G+ M YN IL G+ + F +
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKN----GV--MPDCMTYNSILHGYCSSGQPKEAIGFLK 290
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGV-- 224
+M GV D+ +YS+ MD +CK+G+ +A K++ M K+G+K ++ Y T+++
Sbjct: 291 KMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKG 350
Query: 225 --------------------------------SEG-VDFAMRVYREMREMGCQPSVVTCN 251
++G VD AM V+ +MR+ G P+ VT
Sbjct: 351 ALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYG 410
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL------EKPREILGLFDRM 305
VI +LC++GRV +A +M +G P I Y+ L E+ E L M
Sbjct: 411 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEE---LILEM 467
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
++ GI + ++ + G + +++ M +G P+ YN L++ G +
Sbjct: 468 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKM 527
Query: 366 DMARKYDEEMFAKGLSAKPREELGTKLVQG 395
D A K M + GL KP + L+ G
Sbjct: 528 DEAMKLLSGMVSVGL--KPNTVTYSTLING 555
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 115/268 (42%), Gaps = 50/268 (18%)
Query: 173 VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM 232
V DL +Y I + C++G+ + KKG ++D +A+ +++ + + AM
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142
Query: 233 R-VYREMREMGCQPSVVTCNTVIKLLCENGRVRE-------------------------- 265
V R M E+GC P+V + N ++K LC+ R +E
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202
Query: 266 ------------AYAVLAEMPKKGCVPDVITYH------CFFRCLEKPREILGLFDRMIE 307
AY+ EM +G +PDV+TY+ C + ++K E+L + M++
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVL---NTMVK 259
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
+G+ P TY +L + G + KKM G PD Y+ L+D L G
Sbjct: 260 NGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCME 319
Query: 368 ARKYDEEMFAKGLSAKPREELGTKLVQG 395
ARK + M +GL KP L+QG
Sbjct: 320 ARKIFDSMTKRGL--KPEITTYGTLLQG 345
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 160/380 (42%), Gaps = 51/380 (13%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + + A+ +F + D + YNS+I L +++ + LI M D +
Sbjct: 417 CKSGRVEDAMLYFEQM-IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL- 474
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELC 124
N F + + V E+ F + G+K V +Y L++ C + EA +L
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKL- 533
Query: 125 FGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
SG+V + T Y+ ++ G+ K+S ++EM+ GV D+ +Y+
Sbjct: 534 --------LSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYN 585
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
I + + ++ + A +LY + + G ++++ YN ++ + ++ D A+++++ + M
Sbjct: 586 IILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLM 645
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGL 301
+ T N +I L + GR EA + G VP+ TY +
Sbjct: 646 DLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL-------------M 692
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
+ +I G+ ++D ++ ME+ GC+ D N +V L+
Sbjct: 693 AENIIGQGLLEELDQ-------------------LFLSMEDNGCTVDSGMLNFIVRELLQ 733
Query: 362 KGMLDMARKY----DEEMFA 377
+G + A Y DE+ F+
Sbjct: 734 RGEITRAGTYLSMIDEKHFS 753
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 157/365 (43%), Gaps = 45/365 (12%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
FF W F ++ + + D+L +L + +K+ + N A F ++
Sbjct: 75 GFRFFIWASNFKRF-RAWESCDLITDLLINQNGLELYCQTLEALKNGGIKVHNDAFF-VL 132
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGF 133
K Y+ L ++AM TF + +F +V
Sbjct: 133 IKVYLKMGLTDKAMETFGSMRDFDCTPDVY------------------------------ 162
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
YNMIL + ++ + M K + ++ ++SI +D +CKSG
Sbjct: 163 ----------TYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNV 212
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
A+ L+ EM ++GI D Y VI + S+ VD A R++ +M++ G P VTCN +
Sbjct: 213 KDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNAL 272
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGI 310
+ C RV EA+++L K G V DV Y C R L + + ++ L+ +MIE +
Sbjct: 273 LNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNV 332
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
+P + Y ++++ G +R + +M E G PD YN L+ D G+L AR
Sbjct: 333 KPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARS 392
Query: 371 YDEEM 375
E+
Sbjct: 393 LQLEI 397
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 185/417 (44%), Gaps = 52/417 (12%)
Query: 13 RALEFFNWV-ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
+A+E F + + DC T TYN ++D+L + L+ + RM + +PN ATF
Sbjct: 144 KAMETFGSMRDFDC--TPDVYTYNMILDVLIQKNFLLLALTVYTRMM-KLNCLPNVATFS 200
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL------- 123
I+ + V +A+ F+++ + G L D +YC ++ LC K V +A L
Sbjct: 201 ILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDS 260
Query: 124 ----------------CFGENKNVGFSGLVEMNK------TKIYNMILRGWFKMSWWGKC 161
C + + FS L K + Y+ ++RG F+ +
Sbjct: 261 GVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDV 320
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
+ + +M + V D++ Y+I M + ++GK A++L EM + G+ D V YN +I+
Sbjct: 321 QLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKG 380
Query: 222 VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
+ A + E+ C P+V T + +I +C NG R+A + EM K GC P
Sbjct: 381 FCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPS 440
Query: 282 VITYHCFFRCLEKPREILG---LFDRMIESGIRPKM-------DTYVM-------LLRKF 324
+T++ L K ++ LF +M E G P + ++V+ ++ +
Sbjct: 441 AVTFNSLIDGLCKTGQLEKAHLLFYKM-EIGRNPSLFLRLSQGPSHVLDSASLQKMVEQL 499
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G + + + ++ + G +P + YN LV+ G + A K EM KGLS
Sbjct: 500 CDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLS 556
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 137/300 (45%), Gaps = 31/300 (10%)
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNVGF 133
KRY L+ + K+ E +K +V Y ++ L E V +A EL +
Sbjct: 315 KRYEDVQLL------YRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELL----NEMTE 364
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
SG+V T YN++++G+ M + R E+ + ++ +YSI + MC++G
Sbjct: 365 SGVVP--DTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLT 422
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV------ 247
A +++ EM+K G V +N++I + + ++ A ++ +M E+G PS+
Sbjct: 423 RDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKM-EIGRNPSLFLRLSQ 481
Query: 248 --------VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL 299
+ +++ LC++G + +AY +L ++ G P + TY+ K
Sbjct: 482 GPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFN 541
Query: 300 G---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
G LF M G+ P TY L+ R+ + V+ +ME+ GC+PD Y ++
Sbjct: 542 GAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMM 601
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 133/305 (43%), Gaps = 23/305 (7%)
Query: 52 NLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDA 110
L++R + P+ + IM K A V +A+ N++ E G+ D V Y L+
Sbjct: 321 QLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKG 380
Query: 111 LCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDK 170
C+ + EA+ L +++ F + K Y++++ G + +E + EM+K
Sbjct: 381 FCDMGLLSEARSLQLEISRHDCFPNV------KTYSILISGMCRNGLTRDAQEIFNEMEK 434
Query: 171 RGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK-----------KKGIK--MDVVAYNT 217
G +++ +D +CK+G+ KA L+ +M+ +G +D +
Sbjct: 435 LGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQK 494
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
++ + S + A R+ ++ + G P + T N ++ C+ G AY + EM KG
Sbjct: 495 MVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKG 554
Query: 278 CVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
PD +TY L ++ + +FD+M ++G P Y ++ R L F
Sbjct: 555 LSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAF 614
Query: 335 VVWKK 339
+W K
Sbjct: 615 SLWLK 619
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 109/236 (46%), Gaps = 11/236 (4%)
Query: 166 EEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVS 225
E + G+ ++ + + + K G KA++ + M+ DV YN ++ +
Sbjct: 115 EALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQK 174
Query: 226 EGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
+ A+ VY M ++ C P+V T + +I LC++G V++A + EM ++G +PD TY
Sbjct: 175 NFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTY 234
Query: 286 HCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE 342
L + + + LFD+M +SG+ P T LL F + F + + E+
Sbjct: 235 CVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEK 294
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL---SAKPREELGTKLVQG 395
G D Y+ L+ +G+ R D ++ + + + KP L T +++G
Sbjct: 295 DGYVLDVRGYSCLI-----RGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKG 345
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 22/209 (10%)
Query: 6 CYANDWKRALEFFNWVE-TDCHFTHTTDTYNSVIDILGK----------FFEFDLSWN-- 52
C + A E FN +E C+ + T+NS+ID L K F++ ++ N
Sbjct: 417 CRNGLTRDAQEIFNEMEKLGCY--PSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPS 474
Query: 53 LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDAL 111
L R+ PS + + A+ + M ++ + L+++A +L + G + +Y LV+
Sbjct: 475 LFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGF 534
Query: 112 CEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKR 171
C+ + A +L F E + G S T Y ++ G + + +++M+K
Sbjct: 535 CKLGNFNGAYKL-FREMQFKGLSP-----DTVTYGTLINGLLRFQREEDAYKVFDQMEKN 588
Query: 172 GVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
G D Y M MC+ + +A L+
Sbjct: 589 GCTPDAAVYRTMMTWMCRRMELPRAFSLW 617
>gi|302785283|ref|XP_002974413.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
gi|300158011|gb|EFJ24635.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
Length = 447
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 161/349 (46%), Gaps = 16/349 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+Y ++ K EF + L+ MK N PN + + TA V++A+ F +
Sbjct: 32 SYGILMQGFCKAGEFQQALELLDEMKSNGVR-PNVVIHTTIIRGLCTAGKVSQALLHFRR 90
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ E + +Y LVDALC+ EA L K +V YN ++ G+
Sbjct: 91 IGEDCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVV------TYNALIDGF 144
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K+ + +EM +RG D+ +Y++ +DI CK+ +A +L ++K+ +V
Sbjct: 145 RKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKR----NV 200
Query: 213 VAYNTVIRAVGVSEG--VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
V YN++ A+ +EG A+ + +M + G +P+ V TV+ +LC+N R+ EAY VL
Sbjct: 201 VTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVL 260
Query: 271 AEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
M +GC D ++Y F + + L L RM+ SG T +++ KF +
Sbjct: 261 LSMYSQGCKTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKA 320
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
G L ++K M + G P YN L+ A D A K +M
Sbjct: 321 GDLHEAHQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMI 369
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 139/291 (47%), Gaps = 26/291 (8%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWG 159
+EVSY L+ C+ +A EL E K+ G V ++ T I+RG + G
Sbjct: 29 NEVSYGILMQGFCKAGEFQQALEL-LDEMKSNGVRPNVVIHTT-----IIRG---LCTAG 79
Query: 160 KCREFWEEMDKRG--VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
K + + G ++++YSI +D +CKSG+P +A L EM KKG +VV YN
Sbjct: 80 KVSQALLHFRRIGEDCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNA 139
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
+I E +D + + +EM + GC+ V+T ++ + C+N + EAY +L + K+
Sbjct: 140 LIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKR- 198
Query: 278 CVPDVITYHCFFRCL-----EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
+V+TY+ F L ++ E L L ++MI+ G RP Y +L + L
Sbjct: 199 ---NVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDE 255
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDE-EMFAKGLSA 382
+ V M GC D+ +Y LV A G R YD E+ + L +
Sbjct: 256 AYQVLLSMYSQGCKTDDVSYKILVVAFASAG-----RTYDSLELLGRMLGS 301
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 118/256 (46%), Gaps = 14/256 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAH--LVNEAMGTF 90
TY ++DI K D ++ L++ ++ N T+ +F TA EA+
Sbjct: 171 TYTMILDIFCKNNSIDEAYRLLNALEKR-----NVVTYNSLFTALSTAEGDRTTEALSLL 225
Query: 91 NKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
K+ + G + ++V+Y ++ LC+ + EA ++ +S + + Y +++
Sbjct: 226 EKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSM-----YSQGCKTDDVS-YKILV 279
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
+ E M G + D + ++ + CK+G +A +L+K M ++G
Sbjct: 280 VAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMCQRGSI 339
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
V YNT+I A ++ D A+++ +M + +P+V+T N++IK C R EA +
Sbjct: 340 PSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGI 399
Query: 270 LAEMPKKGCVPDVITY 285
M GC PD ++Y
Sbjct: 400 FQMMVDSGCFPDRVSY 415
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 4/188 (2%)
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ I S + + Y+ ++ V+Y +++ + A+ + EM+ G
Sbjct: 2 LQIFVDSKRHRHGYEFYRHRLLGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGV 61
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILG 300
+P+VV T+I+ LC G+V +A + + C P+V TY L K P E G
Sbjct: 62 RPNVVIHTTIIRGLCTAGKVSQALLHFRRIGED-CAPNVYTYSILVDALCKSGQPHEAYG 120
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L M++ G P + TY L+ F + L V ++ K+M + GC D Y ++D
Sbjct: 121 LVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFC 180
Query: 361 DKGMLDMA 368
+D A
Sbjct: 181 KNNSIDEA 188
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 108/252 (42%), Gaps = 17/252 (6%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLS---WNLIHRMKDNPS 62
C N A N +E TYNS+ L E D + +L+ +M +
Sbjct: 180 CKNNSIDEAYRLLNALEK-----RNVVTYNSLFTALSTA-EGDRTTEALSLLEKMIQEGT 233
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQ 121
PN +R + ++EA + G K D+VSY LV A ++
Sbjct: 234 R-PNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFASAGRTYDSL 292
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
EL G G+ + TK N+++ + K + + ++ M +RG + +Y+
Sbjct: 293 EL-LGRMLGSGY-----ILDTKTMNVVIHKFCKAGDLHEAHQLFKSMCQRGSIPSNVTYN 346
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+ CK+ +P AVKL +M + K +V+ YN++I++ + + A +++ M +
Sbjct: 347 TLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDS 406
Query: 242 GCQPSVVTCNTV 253
GC P V+ T+
Sbjct: 407 GCFPDRVSYTTL 418
>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 168/362 (46%), Gaps = 23/362 (6%)
Query: 50 SWNLIHRMKDNPSSI--PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCN 106
S+NL+ M+ P + N + + KRY T + F + + G+ D +
Sbjct: 45 SFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTV------ISLFKQFEPNGITPDLCTLSI 98
Query: 107 LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE 166
L++ C H+ A + F GF T I + RG K + + F +
Sbjct: 99 LINCFCHQAHITLAFSV-FANILKRGFHPDAITLNTLIKGLCFRGEIKKTLY-----FHD 152
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
++ +G D SY ++ +CK+G+ +L ++++ +K DVV YNT+I ++ ++
Sbjct: 153 QVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNK 212
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
+ A VY EM G P VVT T+I C G+++EA+++L EM K PDV T+
Sbjct: 213 LLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFS 272
Query: 287 CFFRCLEKP------REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
L K E + LF+ M + P + TY L+ + L + K+M
Sbjct: 273 VLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEM 332
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG--LSAKPREELGTKLVQGGLD 398
+E G PD ++Y L+D L G L++A+++ + + KG L+ P + L + GL
Sbjct: 333 KEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLF 392
Query: 399 GE 400
GE
Sbjct: 393 GE 394
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 160/372 (43%), Gaps = 49/372 (13%)
Query: 25 CHFTHTTDTYNSVIDILGKFFEFD-LSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLV 83
CH H T ++ +IL + F D ++ N ++ FR K+ + H
Sbjct: 104 CHQAHITLAFSVFANILKRGFHPDAITLN----------TLIKGLCFRGEIKKTLYFHDQ 153
Query: 84 NEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG-----FSGLVE 138
A G F L D+VSY L++ LC+ GE K V G
Sbjct: 154 VVAQG-------FQL-DQVSYGTLINGLCKA-----------GETKAVARLLRKLEGHSV 194
Query: 139 MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK 198
+YN I+ K G + + EM +G+ D+ +Y+ + C GK +A
Sbjct: 195 KPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFS 254
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEG----VDFAMRVYREMREMGCQPSVVTCNTVI 254
L EMK K I DV ++ +I A+G EG VD AM ++ EM+ P +VT N++I
Sbjct: 255 LLNEMKLKNINPDVYTFSVLIDALG-KEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLI 313
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--C----LEKPREILGLFDRMIES 308
LC+N + A A+L EM + G PDV +Y C LE +E F ++
Sbjct: 314 DGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKE---FFQHLLVK 370
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G + Y +++ + G + KME GC P+ + ++ AL +K D A
Sbjct: 371 GCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKA 430
Query: 369 RKYDEEMFAKGL 380
K EM A+GL
Sbjct: 431 EKILREMIARGL 442
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 132/302 (43%), Gaps = 24/302 (7%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C+ + K+ L F + V F +Y ++I+ L K E L+ +++ + S P
Sbjct: 139 CFRGEIKKTLYFHDQVVAQ-GFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGH-SVKP 196
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
+ + + L+ +A ++++ G+ D V+Y L+ C + EA
Sbjct: 197 DVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEA---- 252
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGK---------CREFWEEMDKRGVVK 175
FS L EM I + + GK +EEM + ++
Sbjct: 253 --------FSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIP 304
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
D+ +Y+ +D +CK+ +A+ L KEMK+ GI+ DV +Y ++ + ++ A +
Sbjct: 305 DIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFF 364
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP 295
+ + GC +V N +I LC+ G EA + ++M KGC+P+ IT+ L +
Sbjct: 365 QHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEK 424
Query: 296 RE 297
E
Sbjct: 425 DE 426
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 161/364 (44%), Gaps = 43/364 (11%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D +ALE FN + + F HT TY S+I+ LG + +F+ ++ M+ N +
Sbjct: 19 DPMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGV 78
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENK 129
+ K Y V EA+ F ++D + + V
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTV--------------------------- 111
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
FS YN I+ ++ + + + M RG+ D++S++I M C+
Sbjct: 112 ---FS----------YNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCR 158
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
+ +P A++L M +G +M+VVAY TV+ D ++ +M G + T
Sbjct: 159 TSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLST 218
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMI 306
N ++ +LC+ G V+E +L ++ K+G +P++ TY+ F + L + E+ + + R+I
Sbjct: 219 FNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLI 278
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
+ G +P + TY L+ + + V K+ G PD F YN L+ GM+
Sbjct: 279 DQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQ 338
Query: 367 MARK 370
+A +
Sbjct: 339 LAER 342
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 151/336 (44%), Gaps = 12/336 (3%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+PN T+ + ++ A+ +L + G K D V+Y L+ LC+ EA E
Sbjct: 248 LPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEA-E 306
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ G+ N G + YN ++ G+ K G V D +Y
Sbjct: 307 VYLGKLVNEGLE-----PDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRS 361
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D +C G+ +A+ L+ E KGIK +V+ YNT+I+ + + A ++ EM E G
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKG 421
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREIL 299
P V T N ++ LC+ G V +A ++ M KG PD+ T++ + K L
Sbjct: 422 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ D M+++G+ P + TY LL + V +K M E GC+P+ F +N L+++L
Sbjct: 482 EILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESL 541
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
LD A EEM K S P L+ G
Sbjct: 542 CRYHKLDKALGLLEEM--KNKSVNPDAVTFGTLIDG 575
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 158/356 (44%), Gaps = 16/356 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF-N 91
TYN +I L K +F + + ++ N P+ T+ + Y +V A N
Sbjct: 288 TYNYLIYGLCKNSKFQEAEVYLGKLV-NEGLEPDSFTYNTLIAGYCKGGMVQLAERILVN 346
Query: 92 KLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + DE +Y +L+D LC A L F E G V +YN +++G
Sbjct: 347 AVFNGFVPDEFTYRSLIDGLCHEGETNRALAL-FNEALGKGIKPNV-----ILYNTLIKG 400
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + EM ++G++ ++ +++I ++ +CK G A L K M KG D
Sbjct: 401 LSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPD 460
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ +N +I ++ A+ + M + G P V T N+++ LC+ + +
Sbjct: 461 IFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYK 520
Query: 272 EMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M +KGC P++ T++ L K + LGL + M + P T+ L+ F + G
Sbjct: 521 TMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNG 580
Query: 329 FLRPVFVVWKKMEE---LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
L + +++KMEE + CS YN ++ A +K + MA K +EM + L
Sbjct: 581 DLDGAYTLFRKMEEVYMVSCSTP--TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLG 634
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 155/372 (41%), Gaps = 48/372 (12%)
Query: 24 DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLV 83
DC T +YN+++ IL FD + + RM+D + P+ +F I K +
Sbjct: 106 DCE--PTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGIT-PDVYSFTIRMKSFCRTSRP 162
Query: 84 NEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKT 142
+ A+ N + G + + V+YC +V E E EL FG+ G S +
Sbjct: 163 HAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYEL-FGKMLASGVSLCLS---- 217
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
+N +L K +C + +++ KRGV+ +L +Y+ ++ +C+ G+ AV++
Sbjct: 218 -TFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGR 276
Query: 203 MKKKGIKMDVVAYNTVIRAVG---------------VSEG-------------------- 227
+ +G K DVV YN +I + V+EG
Sbjct: 277 LIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGM 336
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
V A R+ G P T ++I LC G A A+ E KG P+VI Y+
Sbjct: 337 VQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNT 396
Query: 288 FFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
+ L IL L M E G+ P++ T+ +L+ + G + + K M G
Sbjct: 397 LIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Query: 345 CSPDEFAYNALV 356
PD F +N L+
Sbjct: 457 YFPDIFTFNILI 468
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 138/350 (39%), Gaps = 70/350 (20%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY S+ID L E + + L + PN + + K L+ EA ++
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIK-PNVILYNTLIKGLSNQGLILEAAQLASE 416
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELC------------FGENKNV-GFSGLVE 138
+ E GL EV N LV+ LC+ V +A L F N + G+S ++
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476
Query: 139 M-NKTKI---------------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
M N +I YN +L G K S + E ++ M ++G +L +++I
Sbjct: 477 MENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVA---------------------------- 214
++ +C+ K KA+ L +EMK K + D V
Sbjct: 537 LLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVY 596
Query: 215 --------YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
YN +I A V A ++++EM + P T ++ C+ G V
Sbjct: 597 MVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLG 656
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPK 313
Y L EM + G +P + T CL ++ E G+ RM++ G+ P+
Sbjct: 657 YKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 11/244 (4%)
Query: 154 KMSWWGKCREFWEEM-DKRGVVKDLHSYSIYMDIM---CKSGKPWKAVKLYKEMKKKGIK 209
K+ +GK E + D R V + +Y+ M + GK +AV +++ M +
Sbjct: 49 KLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCE 108
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
V +YN ++ + S D A +VY MR+ G P V + +K C R A +
Sbjct: 109 PTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRL 168
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
L M +GC +V+ Y + E LF +M+ SG+ + T+ LL +
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCK 228
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPRE 386
G ++ + K+ + G P+ F YN + L KG LD A + M + + P+
Sbjct: 229 KGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVR----MVGRLIDQGPKP 284
Query: 387 ELGT 390
++ T
Sbjct: 285 DVVT 288
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 104/263 (39%), Gaps = 55/263 (20%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCE---YKHVIEA 120
P+ TF I+ Y T + A+ + + + G+ +V +Y +L++ LC+ Y+ V+E
Sbjct: 459 PDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMET 518
Query: 121 QELCFGENKNVGFSGLVEMNKTK---IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
+ +VE +N++L + K EEM + V D
Sbjct: 519 ------------YKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDA 566
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKK-KGIKMDVVAYNTVIRA------VGVSE---- 226
++ +D CK+G A L+++M++ + YN +I A V ++E
Sbjct: 567 VTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQ 626
Query: 227 -------------------------GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
VD + EM E G PS+ T VI LC
Sbjct: 627 EMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVED 686
Query: 262 RVREAYAVLAEMPKKGCVPDVIT 284
RV EA ++ M +KG VP+ +
Sbjct: 687 RVYEAAGIIHRMVQKGLVPEAVN 709
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 161/320 (50%), Gaps = 11/320 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ ++ I+ Y V +A+ T +++E GL+ + +++ ++ CE V A E
Sbjct: 358 PSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHA-ET 416
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
G S VE YN ++ G+ + + +C EF +EMDK G+ ++ SY
Sbjct: 417 WVRRMVEKGVSPTVE-----TYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSL 471
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
++ +CK K A + +M +G+ + YN +I A + A R + EM + G
Sbjct: 472 INCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGI 531
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILG 300
++VT NT+I L NGRV++A + +M KGC PDVITY+ K ++ L
Sbjct: 532 DATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLE 591
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L+D+M GI+P + T+ L+ + G + + ++++M ++ PD+F YN ++ +
Sbjct: 592 LYDKMKILGIKPTVGTFHPLIYACRKEGVV-TMDKMFQEMLQMDLVPDQFVYNEMIYSYA 650
Query: 361 DKGMLDMARKYDEEMFAKGL 380
+ G + A ++M +G+
Sbjct: 651 EDGNVMKAMSLHQQMVDQGV 670
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 155/356 (43%), Gaps = 61/356 (17%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+PN T+ + Y + EA+G ++ E ++ + V+Y +L++ LC V +A+E
Sbjct: 224 VPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDARE 283
Query: 123 L-----------------CFGENKN-VGFSGLVEMNKTKI----YNMILRGWFKMSWWGK 160
+ F ++ N G GL + + +I Y ++L G ++ K
Sbjct: 284 VLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEK 343
Query: 161 CREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIR 220
E ++ + GV SY+I ++ C+ G KA+ ++M+++G++ + + +NTVI
Sbjct: 344 AEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVIS 403
Query: 221 AVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVP 280
+ VD A R M E G P+V T N++I + G + L EM K G P
Sbjct: 404 KFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKP 463
Query: 281 DVITYHCFFRCLEKPREILG--------------------------------------LF 302
+VI+Y CL K R+++ F
Sbjct: 464 NVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFF 523
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
D MI+SGI + TY L+ GR G ++ ++ +M GC+PD YN+L+
Sbjct: 524 DEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISG 579
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 157/352 (44%), Gaps = 12/352 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N+VI + E D + + RM + S P T+ + Y ++
Sbjct: 397 TFNTVISKFCETGEVDHAETWVRRMVEKGVS-PTVETYNSLINGYGQKGHFVRCFEFLDE 455
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+D+ G+K V SY +L++ LC+ + +I+A E+ + G S E IYNM++
Sbjct: 456 MDKAGIKPNVISYGSLINCLCKDRKLIDA-EIVLADMIGRGVSPNAE-----IYNMLIEA 509
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+S F++EM + G+ L +Y+ ++ + ++G+ KA L+ +M KG D
Sbjct: 510 SCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPD 569
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V+ YN++I S + +Y +M+ +G +P+V T + +I C V +
Sbjct: 570 VITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLI-YACRKEGVVTMDKMFQ 628
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM + VPD Y+ + ++ L +M++ G+ TY L+ + R
Sbjct: 629 EMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDR 688
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + + M+ G P YN L+ L D + A + EM +GL
Sbjct: 689 RVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGL 740
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 120/267 (44%), Gaps = 39/267 (14%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
E + M K G+ + +Y++ + +CK + A KL+ EM ++ + + V YNT+I
Sbjct: 178 ELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGY 237
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVP-- 280
G++ A+ M+E + ++VT N+++ LC +GRV +A VL EM G +P
Sbjct: 238 CKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGG 297
Query: 281 --------------------------DVITYHCFFRCL------EKPREILGLFDRMIES 308
D TY L EK E+L +++E+
Sbjct: 298 FLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLA---KLVEN 354
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G+ P +Y +L+ + + G ++ + ++MEE G P+ +N ++ + G +D A
Sbjct: 355 GVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHA 414
Query: 369 RKYDEEMFAKGLSAKPREELGTKLVQG 395
+ M KG+S P E L+ G
Sbjct: 415 ETWVRRMVEKGVS--PTVETYNSLING 439
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 167/401 (41%), Gaps = 79/401 (19%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+P+ + + + V + + + F + + G + D V+Y V A K + + E
Sbjct: 119 VPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFE 178
Query: 123 LCFGENKN-VGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
L K+ +G S YN++L G K+ R+ ++EM +R +V + +Y+
Sbjct: 179 LMKSMVKDGMGPSVFA-------YNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYN 231
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+D CK G +A+ + MK++ ++ ++V YN+++ + S VD A V EM
Sbjct: 232 TLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGS 291
Query: 242 GCQP----SVV------------------------TCNTVIKLLCENGRVREAYAVLAEM 273
G P S V T ++ LC GR+ +A VLA++
Sbjct: 292 GFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKL 351
Query: 274 PKKGCVPDVITYHCFF---------------------RCLEKPR----EILGLF------ 302
+ G P I+Y+ R LE R ++ F
Sbjct: 352 VENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEV 411
Query: 303 -------DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
RM+E G+ P ++TY L+ +G+ G F +M++ G P+ +Y +L
Sbjct: 412 DHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSL 471
Query: 356 VDALI-DKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
++ L D+ ++D A +M +G+S P E+ L++
Sbjct: 472 INCLCKDRKLID-AEIVLADMIGRGVS--PNAEIYNMLIEA 509
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 107/249 (42%), Gaps = 14/249 (5%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+ + M K G V S + + + S K + ++ ++ G + D VAY ++A
Sbjct: 108 DLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAA 167
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
+ + +D + + M + G PSV N V+ LC+ R+++A + EM ++ VP+
Sbjct: 168 VMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNT 227
Query: 283 ITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
+TY+ K E LG +RM E + + TY LL G + V +
Sbjct: 228 VTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLE 287
Query: 340 MEELGCSPD---EFAYNALVDALIDKGMLDMAR-KYDEEMFAKGLSAKPR-------EEL 388
ME G P F ++ + D G+ D + DE + L+ R EE+
Sbjct: 288 MEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEV 347
Query: 389 GTKLVQGGL 397
KLV+ G+
Sbjct: 348 LAKLVENGV 356
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 125/282 (44%), Gaps = 15/282 (5%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQEL 123
PN + ++ + + + +A F+++ + G+ V+Y L++ L V +A++L
Sbjct: 498 PNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDL 557
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS-- 181
F + G + V YN ++ G+ K KC E +++M G+ + ++
Sbjct: 558 -FLQMAGKGCNPDV-----ITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPL 611
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
IY C+ K+++EM + + D YN +I + V AM ++++M +
Sbjct: 612 IYA---CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQ 668
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGL 301
G VT N++I + RV E ++ +M KG VP V TY+ + L ++ G
Sbjct: 669 GVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGA 728
Query: 302 ---FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
+ M+E G+ + L+ G LR +V ++
Sbjct: 729 YFWYREMVERGLLLNVSMCYQLISGLREEGMLREAQIVSSEL 770
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 3/188 (1%)
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
+A LY M+K G + N ++R + S + + V+ ++ + G +P V +
Sbjct: 105 EATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAV 164
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIR 311
+ + + + ++ M K G P V Y+ L K R I LFD MI+ +
Sbjct: 165 QAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMV 224
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
P TY L+ + + G + ++M+E + YN+L++ L G +D AR+
Sbjct: 225 PNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREV 284
Query: 372 DEEMFAKG 379
EM G
Sbjct: 285 LLEMEGSG 292
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 119/276 (43%), Gaps = 14/276 (5%)
Query: 5 SCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
SC + K A FF+ + T TYN++I+ LG+ + +L +M +
Sbjct: 510 SCSLSKLKDAFRFFDEM-IQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCN- 567
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELC 124
P+ T+ + Y + + + ++K+ G+K V + + C + V+ ++
Sbjct: 568 PDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKM- 626
Query: 125 FGENKNVGFSGLVEMNKTK---IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
F +++M+ +YN ++ + + K ++M +GV D +Y+
Sbjct: 627 --------FQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYN 678
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+ + + + L +MK KG+ V YN +I+ + + + A YREM E
Sbjct: 679 SLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVER 738
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
G +V C +I L E G +REA V +E+ G
Sbjct: 739 GLLLNVSMCYQLISGLREEGMLREAQIVSSELSIGG 774
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 224 VSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVI 283
VS+ +D A +Y MR+ G PS + N +++ L ++ + AV A++ G PD +
Sbjct: 99 VSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAV 158
Query: 284 TY------HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVW 337
Y + L+K E L M++ G+ P + Y ++L + ++ ++
Sbjct: 159 AYGKAVQAAVMLKDLDKGFE---LMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLF 215
Query: 338 KKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
+M + P+ YN L+D G ++ A + E M
Sbjct: 216 DEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERM 253
>gi|357138018|ref|XP_003570595.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Brachypodium distachyon]
Length = 548
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 165/364 (45%), Gaps = 20/364 (5%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILG----KFFEFDLSWNLIHRMKDNPS-SIPN 66
K A FF W ++ H YN VID L K +F + +++ MK + + S+P
Sbjct: 120 KLAFRFFAWASQQDNYEHDQAAYNEVIDTLSGTRYKARQFGVLCDVLDHMKRHRTRSVPV 179
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCF 125
I+ + Y HL N + E N L+DA C+ V EA E F
Sbjct: 180 EDLLAIL-RAYTEKHLTNLRKLAKKRRVRMRTPPETDALNILLDAFCKCGMVREA-ETVF 237
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
G K G E YN++ GW + K + EEM + +Y +D
Sbjct: 238 GRVKR-KLQGNAE-----TYNILFFGWCRARDPKKAMKVLEEMILMKHAPESFTYIAAID 291
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMD---VVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
C +G +A +L++ M+ +G + AY+ +I A+ ++ +D + +M ++G
Sbjct: 292 SFCSAGLVSEAKELFEFMRTEGSSISSPTAKAYSVMIVALVKADRMDDCFELISDMIKLG 351
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC---LEKPREIL 299
C P V T +I+ +C ++ AY VL EM K G PD++TY+CF L+K + L
Sbjct: 352 CMPDVSTFKDLIEGMCLVDKIDTAYFVLEEMGKAGFPPDIVTYNCFLEVLCNLQKADDAL 411
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
L +RMIE+ P + TY ML+ F + +W +M++ GC Y ++D L
Sbjct: 412 KLCERMIEAHCEPSVHTYNMLMVMFFQMREPHRALDIWLEMDKRGCRRAVDTYEIMIDGL 471
Query: 360 IDKG 363
D G
Sbjct: 472 FDCG 475
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 115/271 (42%), Gaps = 12/271 (4%)
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELC 124
N T+ I+F + A +AM ++ E +Y +D+ C V EA+EL
Sbjct: 247 NAETYNILFFGWCRARDPKKAMKVLEEMILMKHAPESFTYIAAIDSFCSAGLVSEAKEL- 305
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F + G S + K Y++++ K C E +M K G + D+ ++ +
Sbjct: 306 FEFMRTEGSS--ISSPTAKAYSVMIVALVKADRMDDCFELISDMIKLGCMPDVSTFKDLI 363
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ MC K A + +EM K G D+V YN + + + D A+++ M E C+
Sbjct: 364 EGMCLVDKIDTAYFVLEEMGKAGFPPDIVTYNCFLEVLCNLQKADDALKLCERMIEAHCE 423
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC----FFRCLEKPREILG 300
PSV T N ++ + + A + EM K+GC V TY F C + +
Sbjct: 424 PSVHTYNMLMVMFFQMREPHRALDIWLEMDKRGCRRAVDTYEIMIDGLFDC-GRTEDATN 482
Query: 301 LFDRMIESGIR---PKMDTYVMLLRKFGRWG 328
L D +I ++ K D ++ L G G
Sbjct: 483 LLDEVINHDMKLSYKKFDAIMLQLSAVGNLG 513
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 102/241 (42%), Gaps = 16/241 (6%)
Query: 6 CYANDWKRALEFFNWVETDCHF--THTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
C A A E F ++ T+ + T Y+ +I L K D + LI M
Sbjct: 294 CSAGLVSEAKELFEFMRTEGSSISSPTAKAYSVMIVALVKADRMDDCFELISDMI-KLGC 352
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+P+ +TF+ + + ++ A ++ + G D V+Y ++ LC + +A +
Sbjct: 353 MPDVSTFKDLIEGMCLVDKIDTAYFVLEEMGKAGFPPDIVTYNCFLEVLCNLQKADDALK 412
Query: 123 LCFGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
LC ++E + YNM++ +F+M + + W EMDKRG + + +
Sbjct: 413 LC---------ERMIEAHCEPSVHTYNMLMVMFFQMREPHRALDIWLEMDKRGCRRAVDT 463
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y I +D + G+ A L E+ +K+ ++ ++ + + R+ MR
Sbjct: 464 YEIMIDGLFDCGRTEDATNLLDEVINHDMKLSYKKFDAIMLQLSAVGNLGAIHRLSEHMR 523
Query: 240 E 240
+
Sbjct: 524 K 524
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 176/379 (46%), Gaps = 12/379 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + + AL+ +E D YN++ID L K + +++L M D P
Sbjct: 126 CKIGETRSALKLLRMIE-DRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEM-DARGIFP 183
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELC 124
N T+ + + A + EA G N++ + V +Y L+DALC+ V EA+ L
Sbjct: 184 NVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLL 243
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
K +V YN ++ G+ + ++ + M ++GV +++SY+I +
Sbjct: 244 AVMTKEGVKPNVVS------YNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMI 297
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D +CKS + +A+ L +E+ K + + V Y+++I + A+ + +EM G
Sbjct: 298 DRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQP 357
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGL 301
VVT +++ LC+N + +A A+ +M ++G P+ TY L K + L
Sbjct: 358 ADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKL 417
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
F ++ G R + TY +++ + G L + KMEE GC PD + ++ +L +
Sbjct: 418 FQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFE 477
Query: 362 KGMLDMARKYDEEMFAKGL 380
K D A K EM AK L
Sbjct: 478 KDQNDKAEKLLHEMIAKDL 496
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 125/257 (48%), Gaps = 5/257 (1%)
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
T N +++G K F +++ +G D SY+ ++ +CK G+ A+KL +
Sbjct: 80 TITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLR 139
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
++ + + +VV YNT+I + + V+ A +Y EM G P+V+T +T+I C G
Sbjct: 140 MIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAG 199
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYV 318
++ EA+ +L EM K P+V TY L K +E L M + G++P + +Y
Sbjct: 200 QLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYN 259
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
L+ + G ++ ++ M + G +P+ ++YN ++D L +D A E+ K
Sbjct: 260 TLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHK 319
Query: 379 GLSAKPREELGTKLVQG 395
+ P + L+ G
Sbjct: 320 NMV--PNTVTYSSLIDG 334
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 122/275 (44%), Gaps = 38/275 (13%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI------------------ 186
+N I+ KM + +++M +G+ DL + +I ++
Sbjct: 13 FNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKIL 72
Query: 187 -----------------MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVD 229
+C G+ K++ + ++ +G +MD V+Y T++ +
Sbjct: 73 KLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETR 132
Query: 230 FAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF 289
A+++ R + + +P+VV NT+I LC++ V EAY + +EM +G P+VITY
Sbjct: 133 SALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLI 192
Query: 290 R--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
CL + E GL + MI I P + TY +L+ + G ++ + M + G
Sbjct: 193 YGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVK 252
Query: 347 PDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
P+ +YN L+D G + A++ M KG++
Sbjct: 253 PNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVN 287
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 116/244 (47%), Gaps = 9/244 (3%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y +L G K+ + ++ R ++ Y+ +D +CK +A LY EM
Sbjct: 118 YATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMD 177
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+GI +V+ Y+T+I ++ + A + EM P+V T ++ LC+ G+V+
Sbjct: 178 ARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVK 237
Query: 265 EAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPKMDTYV 318
EA +LA M K+G P+V++Y +C ++ ++ +F M++ G+ P + +Y
Sbjct: 238 EAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQ---MFHTMVQKGVNPNVYSYN 294
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+++ + + + + +++ P+ Y++L+D G + A +EM+ +
Sbjct: 295 IMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHR 354
Query: 379 GLSA 382
G A
Sbjct: 355 GQPA 358
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 155/322 (48%), Gaps = 10/322 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
PN TF I+ Y + + EA+ N++ E+G D V+Y ++ ALC+ + + ++L
Sbjct: 209 PNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDL 268
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ KN SGL T YN+++ G+ K+ W + E E M +G++ D+ +Y+
Sbjct: 269 LL-QMKN---SGLFPNRNT--YNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTM 322
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ +C GK +AV+L +M+ + DVV YNT+I G D A ++ EM+ G
Sbjct: 323 VRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGV 382
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFD 303
+ + VT N +IK C G++ EA V+ +M + G PD TY+ K ++ +
Sbjct: 383 KENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYK 442
Query: 304 RMIESGIRP-KMDTYVM--LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
M E G + K+DT+ + LL L + + K + G DE Y L+
Sbjct: 443 MMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYF 502
Query: 361 DKGMLDMARKYDEEMFAKGLSA 382
D A K EEM G+ A
Sbjct: 503 KDEQADRALKLWEEMKETGIVA 524
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 158/365 (43%), Gaps = 14/365 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++ID + D ++ L+ MK N T IM K + T ++EA K
Sbjct: 353 TYNTLIDGCFEHRGSDAAFKLVEEMKARGVK-ENGVTHNIMIKWFCTEGKIDEASNVMVK 411
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G D +Y +++ C+ + EA ++ +G GL T N +L
Sbjct: 412 MVESGFSPDCFTYNTMINGYCKAGKMAEAYKMM----DEMGRKGLKL--DTFTLNTLLHT 465
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ KRG + D +Y + K + +A+KL++EMK+ GI
Sbjct: 466 MCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVAT 525
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
++ YNT+IR + +S D A+ E+ E G P T N +I C G V +A+
Sbjct: 526 IITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHN 585
Query: 272 EMPKKGCVPDVITYHCFFR--CLEKPREI-LGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+M + PD+ T + R C E E L LF+ I G TY +++ F +
Sbjct: 586 KMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKER 645
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPRE-- 386
L F + +ME PD + YNA+V L G + A K + KG K ++
Sbjct: 646 RLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTS 705
Query: 387 -ELGT 390
ELGT
Sbjct: 706 PELGT 710
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 102/192 (53%), Gaps = 6/192 (3%)
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV---GVSEGVDFAMRVYREMREMGCQPS 246
S +P +++ +MK+ + +++ NT++ A+ S + F+ V+++ ++G QP+
Sbjct: 151 SKQPHLGHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPN 210
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMI 306
V T N +I C + EA ++ +M + GC PD +TY+ L K ++ + D ++
Sbjct: 211 VNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLL 270
Query: 307 E---SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
+ SG+ P +TY +L+ + + +L+ V + M G PD + YN +V L D+G
Sbjct: 271 QMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEG 330
Query: 364 MLDMARKYDEEM 375
+D A + ++M
Sbjct: 331 KIDEAVRLRDKM 342
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 12/228 (5%)
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAV---KLYKEMKKKGIKMDVVAYNTV 218
+ + +M + +L + + ++ + +S V +++++ K G++ +V +N +
Sbjct: 158 HQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNIL 217
Query: 219 IRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGC 278
I + A+R+ +M E GC P VT NTV+ LC+ ++ + +L +M G
Sbjct: 218 IHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGL 277
Query: 279 VPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
P+ TY +C + L++ E++ L M G+ P + TY ++R G +
Sbjct: 278 FPNRNTYNILVHGYCKLKWLKEAAEVIEL---MTGKGMLPDVWTYNTMVRGLCDEGKIDE 334
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ KME PD YN L+D + D A K EEM A+G+
Sbjct: 335 AVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGV 382
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 111/257 (43%), Gaps = 38/257 (14%)
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
RE +++ K GV ++++++I + C +A++L +M + G D V YNTV+ A
Sbjct: 196 REVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTA 255
Query: 222 V----GVSEGVDF-------------------------------AMRVYREMREMGCQPS 246
+ +++ D A V M G P
Sbjct: 256 LCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPD 315
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR-CLEK--PREILGLFD 303
V T NT+++ LC+ G++ EA + +M VPDV+TY+ C E L +
Sbjct: 316 VWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVE 375
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
M G++ T+ ++++ F G + V KM E G SPD F YN +++ G
Sbjct: 376 EMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAG 435
Query: 364 MLDMARKYDEEMFAKGL 380
+ A K +EM KGL
Sbjct: 436 KMAEAYKMMDEMGRKGL 452
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 106/268 (39%), Gaps = 54/268 (20%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TYN++I L + D + + ++ + + +P+ +T I+ Y V +A
Sbjct: 525 TIITYNTIIRGLCLSGKTDQAVDKLNELLEK-GLVPDESTSNIIIHGYCWEGAVEKAFQF 583
Query: 90 FNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
NK+ E LK ++ CN L+ LC G++E T ++N
Sbjct: 584 HNKMVEHSLKPDIFTCNILLRGLCR--------------------EGMLEKGLT-LFN-- 620
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+W K G D +Y+I + CK + A L EM+ K +
Sbjct: 621 -------TWISK-----------GKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNL 662
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ-------PSVVTCNTV----IKLL 257
+ D YN ++ + + + A ++ + E G Q P + T + + I L
Sbjct: 663 EPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSL 722
Query: 258 CENGRVREAYAVLAEMPKKGCVPDVITY 285
C G+ ++A + + +KG + TY
Sbjct: 723 CTQGKYKDAMKLFQQAEQKGVSLNKYTY 750
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 168/377 (44%), Gaps = 16/377 (4%)
Query: 10 DWKRALEFFNWVETDCH---FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
D +L FF WV T H H T N ++ L K ++ + N
Sbjct: 46 DVDVSLFFFRWV-TRSHRGESIHNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTN 104
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCF 125
H T+ + + A + A ++ E G D V++ ++V ALC ++ A + F
Sbjct: 105 HITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQY-F 163
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
E+ + ++N+++ G K + + R+ EEM +RG+V D+ +Y+ +D
Sbjct: 164 RESVECAPDSV-------LFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLID 216
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
+CKS + +A +L + M K+ ++ ++V YNT+I + A ++ M + G P
Sbjct: 217 GLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHP 276
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLF 302
VVT N++I C+ ++ +A VL M K C P+++TY+ L + E L
Sbjct: 277 DVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELL 336
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
M GI P + TY L+ F R + F + M E G PD +Y L AL+
Sbjct: 337 SEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKS 396
Query: 363 GMLDMARKYDEEMFAKG 379
D A + MF G
Sbjct: 397 ERFDEAFALLDNMFDAG 413
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 119/242 (49%), Gaps = 11/242 (4%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G+ K + + EM +RG D+ ++S + +C +G +A++ ++E
Sbjct: 108 YNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESV 167
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+ D V +N ++ + + + A ++ EM E G P VVT N++I LC++ R+
Sbjct: 168 E--CAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRME 225
Query: 265 EAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPKMDTYV 318
EA +L M K+ P+++TY +C C + L +RMI+SG P + T+
Sbjct: 226 EARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQ---LIERMIQSGTHPDVVTFN 282
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
L+ F + + V M++ C+P+ YN L+ L D G + A + EM +
Sbjct: 283 SLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGR 342
Query: 379 GL 380
G+
Sbjct: 343 GI 344
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 140/303 (46%), Gaps = 17/303 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS+ID L K + + + L+ M PN T+ + Y A +
Sbjct: 210 TYNSLIDGLCKSYRMEEARQLLETMVKRKVR-PNLVTYNTLIYGYCKTGCTGLAHQLIER 268
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + G D V++ +L+ C+ + +A E+ K + LV YN+++ G
Sbjct: 269 MIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLV------TYNVLISG 322
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ E EMD RG++ D+ +Y+ + I C++ + +A ++ M ++G+ D
Sbjct: 323 LCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPD 382
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
++Y T+ A+ SE D A + M + G P++ T N++++ LC + R+ EA +LA
Sbjct: 383 GISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLA 442
Query: 272 EMPKKGCVPDVITYHCFFRCL------EKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
M + GC P TY L + +E+L + M+ GI+P + + ++
Sbjct: 443 VMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVM---MVSEGIQPLVSSSGTIVHTLA 499
Query: 326 RWG 328
R G
Sbjct: 500 REG 502
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 100/231 (43%), Gaps = 8/231 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+NS+I + + D + ++H MK + PN T+ ++ A NEA ++
Sbjct: 280 TFNSLISGFCQKSKIDKACEVLHLMKKGLCA-PNLVTYNVLISGLCDAGRANEACELLSE 338
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+D G L D ++Y +L+ C + +A ++ +N V G++ + Y +
Sbjct: 339 MDGRGILPDIITYNSLIGIFCRNFQIEQAFQI---QNLMVE-RGVIPDGIS--YCTLAVA 392
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + + + M G + +L +++ M+ +C S + +A L M++ G
Sbjct: 393 LLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPA 452
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
Y ++ + + VD A V M G QP V + T++ L G+
Sbjct: 453 ASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGK 503
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 9/172 (5%)
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSV---VTCNTVIKLLCENGRVREAYAVLA- 271
NTV R + V + VD ++ +R + S+ TCN +++ L + R +AY +
Sbjct: 35 NTVGRVLQVIKDVDVSLFFFRWVTRSHRGESIHNNFTCNCLLRTLVKARRHHQAYQIFRD 94
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
E+ + C + ITY+ K ++ L M E G P + T+ +++ G
Sbjct: 95 ELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTG 154
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
L ++ E + C+PD +N LV L L AR+ EEM +G+
Sbjct: 155 NLSRAMQYFR--ESVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGI 204
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 89/218 (40%), Gaps = 11/218 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN +I L + + L+ M D +P+ T+ + + + +A N
Sbjct: 315 TYNVLISGLCDAGRANEACELLSEM-DGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNL 373
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G + D +SYC L AL + + EA F N+ +G + T +N ++ G
Sbjct: 374 MVERGVIPDGISYCTLAVALLKSERFDEA----FALLDNMFDAGAIPNLFT--FNSLMEG 427
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ R M + G +Y + + +CK+G+ A ++ M +GI+
Sbjct: 428 LCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPL 487
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREM---REMGCQPS 246
V + T++ + D A+ + ++ C PS
Sbjct: 488 VSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPS 525
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 176/370 (47%), Gaps = 17/370 (4%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+++ +AL F + + + H ++T+N+++ +L + FD +W + + +K + +
Sbjct: 101 HSHSTDQALTFLHHMIHEGHVP-LSNTFNNLLCLLIRSNYFDKAWWIFNELKS--KVVLD 157
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCF 125
+F IM K A + L+EFGL V Y L+D C+ +V+ A+ L
Sbjct: 158 AYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFC 217
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
N+ GLV T Y++++ G+FK + + +E M + G+V + ++Y+ +
Sbjct: 218 KMNR----LGLVPNPHT--YSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLIS 271
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF--AMRVYREMREMGC 243
C G KA K++ EM++KGI V+ YN +I G+ G F A+++ ++ ++G
Sbjct: 272 EYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIG--GLCRGKKFGEAVKLVHKVNKVGL 329
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFD 303
P++VT N +I C+ ++ A + ++ G P ++TY+ K + G D
Sbjct: 330 SPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALD 389
Query: 304 ---RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
M E I P TY +L+ F R + ME+ G PD + Y+ L+ L
Sbjct: 390 LVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLC 449
Query: 361 DKGMLDMARK 370
G + A K
Sbjct: 450 VHGNMKEASK 459
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 160/347 (46%), Gaps = 23/347 (6%)
Query: 23 TDCHFTHT---TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVT 79
T HFT T Y++V++ D + +H M + +P TF + +
Sbjct: 78 TQAHFTPCSTYTPLYDTVVNAYVHSHSTDQALTFLHHM-IHEGHVPLSNTFNNLLCLLIR 136
Query: 80 AHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELC-----FGENKNVGFS 134
++ ++A FN+L + D S+ ++ CE + ++ L FG + NV
Sbjct: 137 SNYFDKAWWIFNELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNV--- 193
Query: 135 GLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPW 194
IY ++ G K + + +M++ G+V + H+YS+ M+ K G
Sbjct: 194 --------VIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQR 245
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
+ ++Y+ MK+ GI + AYN +I VD A +V+ EMRE G V+T N +I
Sbjct: 246 EGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILI 305
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIR 311
LC + EA ++ ++ K G P+++TY+ F + K + LF+++ SG+
Sbjct: 306 GGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLS 365
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
P + TY L+ + + L + K+MEE +P + Y L+DA
Sbjct: 366 PTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDA 412
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 125/256 (48%), Gaps = 10/256 (3%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGE 127
T+ I+ EA+ +K+++ GL V+Y L++ C+ + + A L F +
Sbjct: 300 TYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRL-FNQ 358
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
K+ G S + YN ++ G+ K+ + +EM++R + +Y+I +D
Sbjct: 359 LKSSGLSPTLV-----TYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAF 413
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
+ KA +++ M+K G+ DV Y+ ++ + V + A ++++ + EM QP+
Sbjct: 414 ARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNS 473
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDR 304
V NT+I C+ G A +L EM + G VP+V ++ L EK +E L +
Sbjct: 474 VIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQ 533
Query: 305 MIESGIRPKMDTYVML 320
MI SG++P + Y M+
Sbjct: 534 MINSGLKPSVSLYKMV 549
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 109/241 (45%), Gaps = 15/241 (6%)
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
+I +F +WW + E+ K VV D +S+ I + C++G K +L +++
Sbjct: 134 LIRSNYFDKAWW-----IFNEL-KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEF 187
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
G+ +VV Y T+I V A ++ +M +G P+ T + ++ + G RE
Sbjct: 188 GLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREG 247
Query: 267 YAVLAEMPKKGCVPDVITYHCFFR------CLEKPREILGLFDRMIESGIRPKMDTYVML 320
+ + M + G VP+ Y+C ++K ++ F M E GI + TY +L
Sbjct: 248 FQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKV---FAEMREKGIACGVMTYNIL 304
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ R + K+ ++G SP+ YN L++ D +D A + ++ + GL
Sbjct: 305 IGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGL 364
Query: 381 S 381
S
Sbjct: 365 S 365
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 106/245 (43%), Gaps = 8/245 (3%)
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
T +Y+ ++ + + F M G V ++++ + ++ +S KA ++
Sbjct: 89 TPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFN 148
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDF--AMRVYREMREMGCQPSVVTCNTVIKLLCE 259
E+K K + +D ++ +I+ G E F R+ + E G P+VV T+I C+
Sbjct: 149 ELKSK-VVLDAYSFGIMIK--GCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCK 205
Query: 260 NGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDT 316
+G V A + +M + G VP+ TY K RE +++ M SGI P
Sbjct: 206 DGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYA 265
Query: 317 YVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
Y L+ ++ G + F V+ +M E G + YN L+ L A K ++
Sbjct: 266 YNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVN 325
Query: 377 AKGLS 381
GLS
Sbjct: 326 KVGLS 330
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 100/222 (45%), Gaps = 15/222 (6%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A+ FN +++ + T TYN++I K + +L+ M++ + P
Sbjct: 344 CDVRKMDSAVRLFNQLKSS-GLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIA-P 401
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELC 124
+ T+ I+ + + +A + +++ GL +V +Y L+ LC + ++ EA +L
Sbjct: 402 SKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKL- 460
Query: 125 FGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
F L EM+ + IYN ++ G+ K + EM + G+V ++ S+
Sbjct: 461 --------FKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFC 512
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
+ ++C+ K +A L +M G+K V Y V + G
Sbjct: 513 STIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHKVKG 554
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 167/354 (47%), Gaps = 17/354 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+++S++ + + E + +MK +P+ + I+ Y V+ A+ N+
Sbjct: 366 SFSSIVGVFSRNGELGRALAYFEKMK-GVGLVPDTVIYTILINGYCRNDDVSGALKMRNE 424
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK-TKIYNM--I 148
+ E G + D V+Y L++ LC K + +A EL F +VE Y + +
Sbjct: 425 MVERGCVMDVVTYNTLLNGLCRGKMLDDADEL---------FKEMVERGVFPDFYTLTTL 475
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G+ K K +E M R + D+ +Y+ MD CK G+ KA +L+ +M + I
Sbjct: 476 IHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREI 535
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
++++ +I V A R++ EM+E G +P++VTCNT+IK G + +A
Sbjct: 536 FPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKAND 595
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFG 325
L M +G PD ITY+ K L + M E G+ P + TY +L F
Sbjct: 596 FLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFS 655
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R G ++ +V KM + G +PD+ Y +L++ + K + A + +EM +G
Sbjct: 656 RHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRG 709
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 150/339 (44%), Gaps = 18/339 (5%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQE 122
+P+ +F + + + A+ F K+ GL D V Y L++ C V A +
Sbjct: 361 VPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALK 420
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ N+ V ++++ YN +L G + E ++EM +RGV D ++ +
Sbjct: 421 M---RNEMVERGCVMDV---VTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTT 474
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ CK G KA+ L++ M + +K DVV YNT++ ++ A ++ +M
Sbjct: 475 LIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISRE 534
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC------LEKPR 296
PS ++ + +I C G V EA+ + EM +KG P ++T + + L K
Sbjct: 535 IFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKAN 594
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
+ L + MI G+ P TY L+ F + F + MEE G P+ YNA++
Sbjct: 595 DFL---NTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAIL 651
Query: 357 DALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
G + A +M KG++ P + T L+ G
Sbjct: 652 GGFSRHGRMQEAEMVLHKMIDKGIN--PDKSTYTSLING 688
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 12/334 (3%)
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFG 126
T+ + Y LV+EA G + + GLK + +Y L++ LC+ A+ +
Sbjct: 260 VTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRV-LD 318
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
E VG N M++ K W R F EM +RGVV DL S+S + +
Sbjct: 319 EMLGVGLCP----NAATFNPMLVESCRKEDVWEAERVF-NEMLQRGVVPDLISFSSIVGV 373
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
++G+ +A+ +++MK G+ D V Y +I ++ V A+++ EM E GC
Sbjct: 374 FSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMD 433
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFD 303
VVT NT++ LC + +A + EM ++G PD T K + L LF+
Sbjct: 434 VVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFE 493
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
M ++P + TY L+ F + G + +W M P +++ L++ G
Sbjct: 494 TMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLG 553
Query: 364 MLDMARKYDEEMFAKGLSAKPREELGTKLVQGGL 397
++ A + +EM KG+ KP +++G L
Sbjct: 554 LVSEAFRLWDEMKEKGI--KPTLVTCNTIIKGYL 585
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 143/319 (44%), Gaps = 14/319 (4%)
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFG 126
F ++ + YV A + E F L + G ++ CN L+ A+ + V +L +
Sbjct: 155 VVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWV----DLAWK 210
Query: 127 ENKNVGFSGLVEMNKTKIY--NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
++ SG N +Y N+++ K + EM+++GV DL +Y+ +
Sbjct: 211 VYEDFVKSG----NIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLV 266
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ C+ G +A L M KG+K + YN +I + + A RV EM +G
Sbjct: 267 NAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLC 326
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGL 301
P+ T N ++ C V EA V EM ++G VPD+I++ + E+ L
Sbjct: 327 PNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAY 386
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
F++M G+ P Y +L+ + R + + +M E GC D YN L++ L
Sbjct: 387 FEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCR 446
Query: 362 KGMLDMARKYDEEMFAKGL 380
MLD A + +EM +G+
Sbjct: 447 GKMLDDADELFKEMVERGV 465
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 124/260 (47%), Gaps = 7/260 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y+ + G K + E + EM+++G D +Y+I ++ +CK + V L EM+
Sbjct: 94 YSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQ 153
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+G VV Y T+I + VD AM + EM G P+ VT +I+ LC+ G V
Sbjct: 154 ARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVE 213
Query: 265 EAYAVLAEMPKKG--CVPDVITYHCFFRCL-EKPREILGL--FDRMIESGIRPKMDTYVM 319
A VL EM +G C P+V+TY L +K +G+ D MI SG P TY
Sbjct: 214 RAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTA 273
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L+ + G V+ +M +GC D YN+L+D L G LD AR+ M KG
Sbjct: 274 LIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKG 333
Query: 380 LSAKPREELGTKLVQGGLDG 399
++ P T L+QG D
Sbjct: 334 VA--PDVFTYTSLIQGLCDA 351
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 150/326 (46%), Gaps = 16/326 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A+E F +E + TYN +I+ L K + ++ +L+ M+ S P
Sbjct: 102 CKKGQIAEAMEIFREMEEKGSAPDSF-TYNILINGLCKDAQLEMGVSLMDEMQARGFS-P 159
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELC 124
T+ + + TA V+ AM ++++ G+ + V+Y L+ LC+ V E L
Sbjct: 160 TVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEV-ERAILV 218
Query: 125 FGENK---NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
E K N +V + I+ + +G F+M EF +EM G + +Y+
Sbjct: 219 LKEMKLRGNECCPNVVTYTQL-IHGLCQKGLFEMGM-----EFLDEMIISGCFPNNATYT 272
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+ +C+ G +A L EM G ++DVV YN++I + +DFA + M E
Sbjct: 273 ALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEK 332
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREI 298
G P V T ++I+ LC+ G + EA ++ EM KG VP+ +TY F ++
Sbjct: 333 GVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHA 392
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKF 324
L L + M +G+ P D Y +L +
Sbjct: 393 LQLVNEMKSNGLMPAGDIYKILFKSL 418
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 134/306 (43%), Gaps = 16/306 (5%)
Query: 83 VNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
+ EAM F +++E G D +Y L++ LC+ +E E + GFS V
Sbjct: 107 IAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQ-LEMGVSLMDEMQARGFSPTV---- 161
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
Y ++ G+ + +EM+ RG+ + +Y+ + +C G+ +A+ + K
Sbjct: 162 -VTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLK 220
Query: 202 EMKKKGIKM--DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCE 259
EMK +G + +VV Y +I + + M EM GC P+ T +I LC+
Sbjct: 221 EMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQ 280
Query: 260 NGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDR-----MIESGIRPKM 314
G EA +L EM GC DV+ Y+ L K E+ F R M+E G+ P +
Sbjct: 281 KGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELD--FAREMQILMVEKGVAPDV 338
Query: 315 DTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
TY L++ G L + ++M G P+ Y L++ D A + E
Sbjct: 339 FTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNE 398
Query: 375 MFAKGL 380
M + GL
Sbjct: 399 MKSNGL 404
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 8/212 (3%)
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
+ G P ++++Y+ DV++Y+ I + + AM ++REM E G P
Sbjct: 69 RRGIP-SSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSF 127
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRM 305
T N +I LC++ ++ +++ EM +G P V+TY F + + + D M
Sbjct: 128 TYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEM 187
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG--CSPDEFAYNALVDALIDKG 363
GI P TY L++ G + +V K+M+ G C P+ Y L+ L KG
Sbjct: 188 EHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKG 247
Query: 364 MLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+ +M ++ +EM G P T L+ G
Sbjct: 248 LFEMGMEFLDEMIISG--CFPNNATYTALIHG 277
>gi|10177952|dbj|BAB11311.1| unnamed protein product [Arabidopsis thaliana]
Length = 680
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 167/367 (45%), Gaps = 12/367 (3%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKR 76
FF+W + T +Y+ ++ LG+ F +++ M + P+ I
Sbjct: 137 FFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVN-PDLECLTIAMDS 195
Query: 77 YVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSG 135
+V H V A+ F + + FG+K S+ L+ LCE HV A+ + + N+ F
Sbjct: 196 FVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDS 255
Query: 136 LVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK 195
YN+++ GW K+ + + +EM + G D SYS ++ + ++G+
Sbjct: 256 CS-------YNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRIND 308
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
+V+++ +K KG D YN +I + D +MR YR M + C+P++ T + ++
Sbjct: 309 SVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVS 368
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRP 312
L + +V +A + EM +G +P F + L P + ++ + ++G R
Sbjct: 369 GLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRI 428
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
Y +LL++ R+G + VW +M+E G D Y +VD L G L+ A
Sbjct: 429 SESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVM 488
Query: 373 EEMFAKG 379
EE KG
Sbjct: 489 EEAMRKG 495
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 104/240 (43%), Gaps = 6/240 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y++ILR + + + + M GV DL +I MD + +A++L++E +
Sbjct: 154 YSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESE 213
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP-SVVTCNTVIKLLCENGRV 263
G+K ++N ++R + V A V+ + G P + N +I + G V
Sbjct: 214 SFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKK--GNIPFDSCSYNIMISGWSKLGEV 271
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVML 320
E VL EM + G PD ++Y L + I + +FD + G P + Y +
Sbjct: 272 EEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAM 331
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ F +++M + C P+ Y+ LV LI + A + EEM ++G+
Sbjct: 332 ICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGV 391
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%)
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
+ Y+ ++ G K E +EEM RGV+ + ++ +C G P A+ +Y++
Sbjct: 361 ETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQK 420
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
+K G ++ AY +++ + + V+ EM+E G V ++ LC G
Sbjct: 421 SRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGH 480
Query: 263 VREAYAVLAEMPKKGCVPDVITY 285
+ A V+ E +KG P+ Y
Sbjct: 481 LENAVLVMEEAMRKGFCPNRFVY 503
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 158/320 (49%), Gaps = 10/320 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+H F I+ Y V++AM F+K+ + GL + V+Y ++ LC+ V +A L
Sbjct: 369 PDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM-L 427
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + + G S +YN ++ G + W + E EM RG+ + ++
Sbjct: 428 YFEQMIDEGLS-----PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 482
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D CK G+ ++ KL++ M + G+K +V+ YNT+I ++ +D AM++ M +G
Sbjct: 483 IDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGL 542
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG--- 300
+P+ VT +T+I C+ R+ +A + EM G PD+ITY+ + L + R
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 602
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L+ R+ ESG + ++ TY ++L + +++ + + + +N ++DAL+
Sbjct: 603 LYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALL 662
Query: 361 DKGMLDMARKYDEEMFAKGL 380
G D A+ + GL
Sbjct: 663 KVGRNDEAKDLFVAFSSNGL 682
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 148/310 (47%), Gaps = 9/310 (2%)
Query: 90 FNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
++ E G + + SY L+ LC+ EA EL + G ++ Y +
Sbjct: 146 LRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVS---YTTV 202
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G+FK K + EM RG++ D+ +Y+ + +CK+ KA+++ M K G+
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
D + YN+++ S A+ ++MR G +P VVT + ++ LC+NGR EA
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ M K+G P++ TY + E+ GL D M+ +GI P + +L+ +
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
+ G + +V+ KM + G +P+ Y A++ L G ++ A Y E+M +GLS P
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS--PG 440
Query: 386 EELGTKLVQG 395
+ L+ G
Sbjct: 441 NIVYNSLIHG 450
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 172/390 (44%), Gaps = 55/390 (14%)
Query: 50 SWNLIHRMKDN--PSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK-LDEFGLKDEVSYCN 106
+ L+H M D+ S P+ ++ + + ++A T+++ LD L D V+Y +
Sbjct: 177 ALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNS 236
Query: 107 LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE 166
++ ALC+ + + +A E+ KN G+ M YN IL G+ + F +
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKN----GV--MPDCMTYNSILHGYCSSGQPKEAIGFLK 290
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG--- 223
+M GV D+ +YS+ MD +CK+G+ +A K++ M K+G+K ++ Y T+++
Sbjct: 291 KMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKG 350
Query: 224 ------------VSEG--------------------VDFAMRVYREMREMGCQPSVVTCN 251
V G VD AM V+ +MR+ G P+ VT
Sbjct: 351 ALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYG 410
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL------EKPREILGLFDRM 305
VI +LC++GRV +A +M +G P I Y+ L E+ E L M
Sbjct: 411 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEE---LILEM 467
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
++ GI + ++ + G + +++ M +G P+ YN L++ G +
Sbjct: 468 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKM 527
Query: 366 DMARKYDEEMFAKGLSAKPREELGTKLVQG 395
D A K M + GL KP + L+ G
Sbjct: 528 DEAMKLLSGMVSVGL--KPNTVTYSTLING 555
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 115/268 (42%), Gaps = 50/268 (18%)
Query: 173 VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM 232
V DL +Y I + C++G+ + KKG ++D +A+ +++ + + AM
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142
Query: 233 R-VYREMREMGCQPSVVTCNTVIKLLCENGRVRE-------------------------- 265
V R M E+GC P+V + N ++K LC+ R +E
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202
Query: 266 ------------AYAVLAEMPKKGCVPDVITYH------CFFRCLEKPREILGLFDRMIE 307
AY+ EM +G +PDV+TY+ C + ++K E+L + M++
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVL---NTMVK 259
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
+G+ P TY +L + G + KKM G PD Y+ L+D L G
Sbjct: 260 NGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCME 319
Query: 368 ARKYDEEMFAKGLSAKPREELGTKLVQG 395
ARK + M +GL KP L+QG
Sbjct: 320 ARKIFDSMTKRGL--KPEITTYGTLLQG 345
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 160/380 (42%), Gaps = 51/380 (13%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + + A+ +F + D + YNS+I L +++ + LI M D +
Sbjct: 417 CKSGRVEDAMLYFEQM-IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL- 474
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELC 124
N F + + V E+ F + G+K V +Y L++ C + EA +L
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKL- 533
Query: 125 FGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
SG+V + T Y+ ++ G+ K+S ++EM+ GV D+ +Y+
Sbjct: 534 --------LSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYN 585
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
I + + ++ + A +LY + + G ++++ YN ++ + ++ D A+++++ + M
Sbjct: 586 IILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLM 645
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGL 301
+ T N +I L + GR EA + G VP+ TY +
Sbjct: 646 DLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL-------------M 692
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
+ +I G+ ++D ++ ME+ GC+ D N +V L+
Sbjct: 693 AENIIGQGLLEELDQ-------------------LFLSMEDNGCTVDSGMLNFIVRELLQ 733
Query: 362 KGMLDMARKY----DEEMFA 377
+G + A Y DE+ F+
Sbjct: 734 RGEITRAGTYLSMIDEKHFS 753
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 169/363 (46%), Gaps = 14/363 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C+ N A+ + + + + T+N++I L + + L+ RM P
Sbjct: 162 CHGNRISDAVSLVGQM-VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQ-P 219
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELC 124
+ T+ I+ ++ A+ K+++ ++ V Y ++DALC YK+V +A L
Sbjct: 220 DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNL- 278
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F E N G V YN ++R W +M +R + ++ ++S +
Sbjct: 279 FTEMDNKGIRPNV-----VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 333
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D K GK +A KLY EM K+ I D+ Y+++I + + +D A ++ M C
Sbjct: 334 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 393
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY----HCFFRCLEKPREILG 300
P+VVT NT+IK C+ RV E + EM ++G V + +TY H FF+ E +
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQI- 452
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+F +M+ G+ P + TY +LL G + VV++ ++ PD + YN +++ +
Sbjct: 453 VFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMC 512
Query: 361 DKG 363
G
Sbjct: 513 KAG 515
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 170/351 (48%), Gaps = 11/351 (3%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
++ ++ + K +FDL +L +M+ N N T+ I+ + ++ A+ K+
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQ-NLGISHNLYTYSILINCFCRRSQLSLALAVLAKM 142
Query: 94 DEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ G + D V+ +L++ C + +A L G+ +G+ + +N ++ G
Sbjct: 143 MKLGYEPDIVTLNSLLNGFCHGNRISDAVSL-VGQMVEMGYQP-----DSFTFNTLIHGL 196
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
F+ + + + M +G DL +Y I ++ +CK G A+ L K+M++ I+ V
Sbjct: 197 FRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGV 256
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V YNT+I A+ + V+ A+ ++ EM G +P+VVT N++I+ LC GR +A +L++
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M ++ P+V+T+ K +++ L+D MI+ I P + TY L+ F
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
L +++ M C P+ YN L+ +D + EM +GL
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 164/364 (45%), Gaps = 34/364 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY V++ L K + DL+ +L+ +M+ P + + VN+A+ F +
Sbjct: 223 TYGIVVNGLCKRGDIDLALSLLKKMEQGKIE-PGVVIYNTIIDALCNYKNVNDALNLFTE 281
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE-----NKNV-GFSGLV-------- 137
+D G++ + V+Y +L+ LC Y +A L N NV FS L+
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341
Query: 138 ---------EMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
EM K I Y+ ++ G+ + + +E M + ++ +Y+
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 401
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ CK+ + + ++L++EM ++G+ + V Y T+I + D A V+++M G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG-- 300
P ++T + ++ LC NG+V A V + + PD+ TY+ + K ++
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGW 521
Query: 301 -LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
LF + G++P + TY ++ F R G ++++M+E G PD YN L+ A
Sbjct: 522 DLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAH 581
Query: 360 IDKG 363
+ G
Sbjct: 582 LRDG 585
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 142/309 (45%), Gaps = 12/309 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ TF + + +EA+ +++ G + D V+Y +V+ LC+ + A L
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ G+V IYN I+ + EMD +G+ ++ +Y+
Sbjct: 244 LKKMEQGKIEPGVV------IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG-VDFAMRVYREMREMG 242
+ +C G+ A +L +M ++ I +VV ++ +I A V EG + A ++Y EM +
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF-VKEGKLVEAEKLYDEMIKRS 356
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---L 299
P + T +++I C + R+ EA + M K C P+V+TY+ + K + + +
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
LF M + G+ TY L+ F + +V+K+M G PD Y+ L+D L
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGL 476
Query: 360 IDKGMLDMA 368
+ G ++ A
Sbjct: 477 CNNGKVETA 485
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 104/221 (47%), Gaps = 3/221 (1%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+ +M K + +S + + K K + L ++M+ GI ++ Y+ +I
Sbjct: 67 NLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCF 126
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
+ A+ V +M ++G +P +VT N+++ C R+ +A +++ +M + G PD
Sbjct: 127 CRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDS 186
Query: 283 ITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
T++ L + E + L DRM+ G +P + TY +++ + G + + KK
Sbjct: 187 FTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKK 246
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
ME+ P YN ++DAL + ++ A EM KG+
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI 287
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 84/183 (45%), Gaps = 3/183 (1%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
AV L+ +M K +V ++ ++ A+ D + + +M+ +G ++ T + +I
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRP 312
C ++ A AVLA+M K G PD++T + + + + L +M+E G +P
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
T+ L+ R + +M GC PD Y +V+ L +G +D+A
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 373 EEM 375
++M
Sbjct: 245 KKM 247
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 116/256 (45%), Gaps = 14/256 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+S+I+ D + ++ M + PN T+ + K + A V+E M F +
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMI-SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + GL + V+Y L+ + + AQ + F + + G + Y+++L G
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQ-IVFKQMVSDGV-----LPDIMTYSILLDG 475
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+E + + + D+++Y+I ++ MCK+GK L+ + KG+K +
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535
Query: 212 VVAYNTVIRAV---GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
VV Y T++ G+ E D ++REM+E G P T NT+I+ +G +
Sbjct: 536 VVTYTTMMSGFCRKGLKEEAD---ALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAE 592
Query: 269 VLAEMPKKGCVPDVIT 284
++ EM V D T
Sbjct: 593 LIREMRSCRFVGDAST 608
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 65/155 (41%), Gaps = 3/155 (1%)
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
+D A+ ++ +M + PS+V + ++ + + + ++ +M G ++ TY
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 288 FFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
C + ++ L + +M++ G P + T LL F + + +M E+G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
PD F +N L+ L A + M KG
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG 216
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 167/350 (47%), Gaps = 11/350 (3%)
Query: 15 LEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
++FF W +F H + TY ++I L + W I M + I A +
Sbjct: 108 IQFFKWAGKRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVI-GPADLSEIV 166
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGF 133
K A +VN+A+ F ++ K +Y +++ L + H + EL + E N G
Sbjct: 167 KVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHEL-YNEMCNEGD 225
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
+ T Y+ ++ + K+ ++EM + G+ Y+ + I K G+
Sbjct: 226 C----LPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRV 281
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
KA+ L +EMK+KG + V Y +I+ VG + V+ A ++ M + GC+P VV N +
Sbjct: 282 EKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNL 341
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL----EKPREILGLFDRMIESG 309
I LL + GR+ +A + EM C P+V+TY+ + L + E +++M E+G
Sbjct: 342 INLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENG 401
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ P TY +L+ F + + ++ ++M+E G +P AY +L++AL
Sbjct: 402 VVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINAL 451
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 169/355 (47%), Gaps = 12/355 (3%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T Y +++ I K + + L+ MK+ ++ + T+ + K A V EA
Sbjct: 264 TAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVY-TYTELIKGVGKAGKVEEAYSI 322
Query: 90 F-NKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
F N L E D V NL++ L + + +A +L F E +++ + V YN +
Sbjct: 323 FMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKL-FEEMESLQCTPNV-----VTYNTV 376
Query: 149 LRGWFKMSWWGKCREFW-EEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++ F+ W E+M + GVV +YSI +D CK+ + KA+ L +EM +KG
Sbjct: 377 IKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKG 436
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
AY ++I A+G ++ + A +++E+RE S +IK L + GR+ EA
Sbjct: 437 FAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAV 496
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKF 324
+ EM K GC PDV Y+ + + E L M E+G P ++++ ++L F
Sbjct: 497 DLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGF 556
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R G + ++ +M+ PD +YN ++ L GM + A K +EM +KG
Sbjct: 557 ARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKG 611
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 135/289 (46%), Gaps = 16/289 (5%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLI----HRMKDNPSSIPNHAT 69
A++ F +E+ T TYN+VI L FE + +MK+N +P+ T
Sbjct: 354 AIKLFEEMES-LQCTPNVVTYNTVIKAL---FESKARASEAFLWYEKMKEN-GVVPSSFT 408
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKD-EVSYCNLVDALCEYKHVIEAQELCFGEN 128
+ I+ + + V +A+ ++DE G +YC+L++AL + K A EL
Sbjct: 409 YSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELR 468
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
+N G+S ++Y ++++ K + + + EM K G D+++Y+ M M
Sbjct: 469 ENCGYSS------ARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMV 522
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
+ G +A L + M++ G D+ ++N ++ + G A+ ++ M+ +P VV
Sbjct: 523 RVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVV 582
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
+ NTV+ L G EA ++ EM KG D+ITY + K E
Sbjct: 583 SYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGKIDE 631
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 107/227 (47%), Gaps = 13/227 (5%)
Query: 157 WWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
W GK R F E D + +H +D G+ WK ++ EM + + +
Sbjct: 113 WAGKRRNF--EHDSTTYMALIHC----LDEAGMLGEMWKTIQ---EMVRSTCVIGPADLS 163
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
+++ +G ++ V+ A+ ++ +++ C+P+ T N++I +L + G + + + EM +
Sbjct: 164 EIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNE 223
Query: 277 G-CVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
G C+PD +TY F L + + LFD M E+G+ P Y +L + + G +
Sbjct: 224 GDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEK 283
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ ++M+E GC+ + Y L+ + G ++ A M +G
Sbjct: 284 ALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEG 330
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 181/404 (44%), Gaps = 33/404 (8%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D+ +A E + + T+ + +TYN +I+ L K + D S + +RMK N S P+ T
Sbjct: 234 DFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKS-PDLFT 292
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDAL--------C-EYKHVIE 119
F M A N A F ++ E GL +V +Y ++ L C E +V+
Sbjct: 293 FSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMS 352
Query: 120 AQELCFGENKNVGFSGLVEMNK-------------------TKIYNMILRGWFKMSWWGK 160
C + N+ GL++ K + Y +++ G K + K
Sbjct: 353 KNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNK 412
Query: 161 CREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIR 220
EE + G D +YS + +CK G +AV+L +MKK K++ +N++I
Sbjct: 413 ALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLIN 472
Query: 221 AVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVP 280
+ ++ A+ V REM+ C P+VV+ NT+I LC+ R +AY L EM ++G P
Sbjct: 473 GYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKP 532
Query: 281 DVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVW 337
D+ITY L EK L L+ + I ++P + + +++ + ++
Sbjct: 533 DMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIF 592
Query: 338 KKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+M ++ C PD +N +++ L G A K + + GL
Sbjct: 593 TQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQ 636
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 148/317 (46%), Gaps = 17/317 (5%)
Query: 74 FKRYVTAHLVNEAMGTF-NKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNV 131
K Y + ++A+ F N +D FG + S+ ++++A E EA EL F +
Sbjct: 85 IKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREA-ELFFTYFQTA 143
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
G S + YN++++ K + K + M + G+ D+ SY ++ + KSG
Sbjct: 144 GMSP-----NLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSG 198
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF--AMRVY-REMREMGCQPSVV 248
AV+L+ EM +G+ DV+ YN +I G DF A ++ R + E PSV
Sbjct: 199 NLLDAVELFDEMSVRGVNPDVMCYNILID--GFLRKGDFVKANEIWKRLLTESSVYPSVE 256
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRM 305
T N +I LC+ G++ E+ + M K PD+ T+ L K +F M
Sbjct: 257 TYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEM 316
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
IESG+ P + TY +L R G L F +W M + C + +YN L+ L+D +
Sbjct: 317 IESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCC-NIVSYNMLIQGLLDNKKV 375
Query: 366 DMARKYDEEMFAKGLSA 382
+ A Y + + +GL A
Sbjct: 376 EQAICYWQLLHERGLKA 392
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 132/296 (44%), Gaps = 46/296 (15%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T Y+S++ L K + + LIH+MK N + +H F + YV A + EA+
Sbjct: 429 TFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSH-VFNSLINGYVRAFKLEEAISV- 486
Query: 91 NKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
L E KD C V YN I+
Sbjct: 487 --LREMKSKD-----------CAPTVVS--------------------------YNTIIN 507
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
G K + +EM + G+ D+ +YS+ +D +C+ K A+ L+ + K +K
Sbjct: 508 GLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKP 567
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
D+ +N +I + ++ VD A+ ++ +MR++ C P +VT NT+++ L + G EA +
Sbjct: 568 DLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIW 627
Query: 271 AEMPKKGCVPDVITYHCFFR----CLEKPREILGLFDRMIESGIRPKMDTYVMLLR 322
+ + G PD+I+Y+ F+ C I L+D + + GI P T+ +L+R
Sbjct: 628 DRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDAL-DRGILPNAPTWNVLVR 682
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 112/242 (46%), Gaps = 5/242 (2%)
Query: 149 LRGWFKMSWWGKCREFWEEM-DKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++ + K S + ++ M D G + S++ ++ +S + +A + + G
Sbjct: 85 IKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAG 144
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ ++ YN +I+ + + M E G P +++ T+I L ++G + +A
Sbjct: 145 MSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAV 204
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMI-ESGIRPKMDTYVMLLRK 323
+ EM +G PDV+ Y+ + + + ++ R++ ES + P ++TY +++
Sbjct: 205 ELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMING 264
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAK 383
+ G L +W +M++ SPD F +++++ L G + A K +EM GLS
Sbjct: 265 LCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPD 324
Query: 384 PR 385
R
Sbjct: 325 VR 326
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 143/294 (48%), Gaps = 17/294 (5%)
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEA----QELCFGENKNVGFSGLVEMNKTKIYNMI 148
+ + D ++Y +V+ LC+ K + +A +E+ K F IYN +
Sbjct: 1 MARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAF----------IYNFV 50
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
L G + + R +E+M K+ + ++ +Y+ ++ +CK+ + A +L+KEM KG
Sbjct: 51 LSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGY 110
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
V+YNT+I + + A V+ +M C P+VVT T+I L ++G+V+ A
Sbjct: 111 VPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAE 170
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFG 325
VL M KKG P+V TY C K R E L ++M+ GI P + TY +LL
Sbjct: 171 VLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLC 230
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R L F +++ M + C P YN L+ AL LD A + EM AKG
Sbjct: 231 RADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKG 284
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 114/225 (50%), Gaps = 13/225 (5%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL 123
PN T+ + A + A F ++ G + EVSY L+D C+ K ++ A+++
Sbjct: 77 PNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDV 136
Query: 124 CFGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
F +V N Y ++ G K E + M K+GV ++ +Y
Sbjct: 137 ---------FDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATY 187
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
S +D CK + +A KL ++M +GI VV YN ++ ++ ++ ++ A +++R M +
Sbjct: 188 SCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQ 247
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
C P+VVT NT+++ LC + ++ A+ + AEM KGC PD ITY
Sbjct: 248 RRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITY 292
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 106/209 (50%), Gaps = 3/209 (1%)
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
D +Y ++ +CK+ + A+ +EM +GIK D YN V+ + E V+ A ++
Sbjct: 8 DALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLF 67
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP 295
+M + P+VVT NT+I LC+ R+ AY + EM KG VP ++Y+ K
Sbjct: 68 EKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKK 127
Query: 296 REILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
++++ +FD+M+ S P + TY L+ + G ++ V M + G +P+ Y
Sbjct: 128 KDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATY 187
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ L+D +D A K E+M +G++
Sbjct: 188 SCLIDGFCKVRRVDEAHKLLEQMVTQGIA 216
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 119/245 (48%), Gaps = 14/245 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++I+ L K + + ++ L M +P ++ + + + A F+K
Sbjct: 81 TYNTLINGLCKAWRIETAYELFKEMAGK-GYVPTEVSYNTLIDGFCKKKDLVAAKDVFDK 139
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK---IYNMI 148
+ + + V+Y L+D L + V A E+ G+V+ T Y+ +
Sbjct: 140 MVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEV---------LDGMVKKGVTPNVATYSCL 190
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G+ K+ + + E+M +G+ + +Y+I ++ +C++ K A KL++ M ++
Sbjct: 191 IDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRC 250
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
VV YNT++RA+ + +D A R+Y EM GC P +T +T+ L G+V EA
Sbjct: 251 HPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQE 310
Query: 269 VLAEM 273
++ +M
Sbjct: 311 LMEKM 315
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 84/193 (43%), Gaps = 8/193 (4%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
+ T +YN++ID K + + ++ +M + + +PN T+ + + V A
Sbjct: 110 YVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRS-NCVPNVVTYTTLIDGLSKSGKVQAA 168
Query: 87 MGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
+ + + G+ V +Y L+D C+ + V EA +L + + G+ T Y
Sbjct: 169 AEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLL----EQMVTQGIAPTVVT--Y 222
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N++L + + + M +R + +Y+ + +C + A +LY EM
Sbjct: 223 NILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIA 282
Query: 206 KGIKMDVVAYNTV 218
KG D + Y+T+
Sbjct: 283 KGCPPDAITYDTL 295
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 167/350 (47%), Gaps = 11/350 (3%)
Query: 15 LEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
++FF W +F H + TY ++I L + W I M + I A +
Sbjct: 108 IQFFKWAGKRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVI-GPADLSEIV 166
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGF 133
K A +VN+A+ F ++ K +Y +++ L + H + EL + E N G
Sbjct: 167 KVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHEL-YNEMCNEGD 225
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
+ T Y+ ++ + K+ ++EM + G+ Y+ + I K G+
Sbjct: 226 C----LPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRV 281
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
KA+ L +EMK+KG + V Y +I+ VG + V+ A ++ M + GC+P VV N +
Sbjct: 282 EKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNL 341
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL----EKPREILGLFDRMIESG 309
I LL + GR+ +A + EM C P+V+TY+ + L + E +++M E+G
Sbjct: 342 INLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENG 401
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ P TY +L+ F + + ++ ++M+E G +P AY +L++AL
Sbjct: 402 VVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINAL 451
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 169/355 (47%), Gaps = 12/355 (3%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T Y +++ I K + + L+ MK+ ++ + T+ + K A V EA
Sbjct: 264 TAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVY-TYTELIKGVGKAGKVEEAYSI 322
Query: 90 F-NKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
F N L E D V NL++ L + + +A +L F E +++ + V YN +
Sbjct: 323 FMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKL-FEEMESLQCTPNV-----VTYNTV 376
Query: 149 LRGWFKMSWWGKCREFW-EEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++ F+ W E+M + GVV +YSI +D CK+ + KA+ L +EM +KG
Sbjct: 377 IKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKG 436
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
AY ++I A+G ++ + A +++E+RE S +IK L + GR+ EA
Sbjct: 437 FAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAV 496
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKF 324
+ EM K GC PDV Y+ + + E L M E+G P ++++ ++L F
Sbjct: 497 DLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGF 556
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R G + ++ +M+ PD +YN ++ L GM + A K +EM +KG
Sbjct: 557 ARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKG 611
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 135/289 (46%), Gaps = 16/289 (5%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLI----HRMKDNPSSIPNHAT 69
A++ F +E+ T TYN+VI L FE + +MK+N +P+ T
Sbjct: 354 AIKLFEEMES-LQCTPNVVTYNTVIKAL---FESKARASEAFLWYEKMKEN-GVVPSSFT 408
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKD-EVSYCNLVDALCEYKHVIEAQELCFGEN 128
+ I+ + + V +A+ ++DE G +YC+L++AL + K A EL
Sbjct: 409 YSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELR 468
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
+N G+S ++Y ++++ K + + + EM K G D+++Y+ M M
Sbjct: 469 ENCGYSS------ARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMV 522
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
+ G +A L + M++ G D+ ++N ++ + G A+ ++ M+ +P VV
Sbjct: 523 RVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVV 582
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
+ NTV+ L G EA ++ EM KG D+ITY + K E
Sbjct: 583 SYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGKIDE 631
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 107/227 (47%), Gaps = 13/227 (5%)
Query: 157 WWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
W GK R F E D + +H +D G+ WK ++ EM + + +
Sbjct: 113 WAGKRRNF--EHDSTTYMALIHC----LDEAGMLGEMWKTIQ---EMVRSTCVIGPADLS 163
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
+++ +G ++ V+ A+ ++ +++ C+P+ T N++I +L + G + + + EM +
Sbjct: 164 EIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNE 223
Query: 277 G-CVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
G C+PD +TY F L + + LFD M E+G+ P Y +L + + G +
Sbjct: 224 GDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEK 283
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ ++M+E GC+ + Y L+ + G ++ A M +G
Sbjct: 284 ALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEG 330
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 150/324 (46%), Gaps = 25/324 (7%)
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDAL----CEYKHVI----EA 120
F + Y + L EA+ FN + E+GL+ V+Y ++DA E+K V E
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
Q C ++ +N +L + W R ++EM R + +D+ SY
Sbjct: 331 QRNCVQPDR-------------ITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSY 377
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ +D +CK G+ A ++ +M K I +VV+Y+TVI + D A+ ++ EMR
Sbjct: 378 NTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY 437
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---RE 297
+ V+ NT++ + + GR EA +L EM G DV+TY+ K E
Sbjct: 438 LNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDE 497
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ +F M + P + TY L+ + + G + V+++ + G D Y+AL+D
Sbjct: 498 VKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALID 557
Query: 358 ALIDKGMLDMARKYDEEMFAKGLS 381
AL G++ A +EM +G+S
Sbjct: 558 ALCKNGLVGSAVSLIDEMTKEGIS 581
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 134/305 (43%), Gaps = 24/305 (7%)
Query: 33 TYNSVIDILGK-FFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
TYN+VID GK EF M+ N P+ TF + L A F+
Sbjct: 305 TYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQ-PDRITFNSLLAVCSRGGLWEAARNLFD 363
Query: 92 KLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI------ 144
++ ++ +V SY L+DA+C+ G ++ F L +M +I
Sbjct: 364 EMSNRRIEQDVFSYNTLLDAICK------------GGQMDLAFEILAQMPAKRIMPNVVS 411
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y+ ++ G+ K + + + EM + D SY+ + I K G+ +A+ + +EM
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMA 471
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
GIK DVV YN ++ G D +V+ EM+ P+++T +T+I + G +
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYK 531
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
EA V E G DV+ Y L K + + L D M + GI P + TY ++
Sbjct: 532 EAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Query: 322 RKFGR 326
FGR
Sbjct: 592 DAFGR 596
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 41/255 (16%)
Query: 161 CREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIR 220
+ +E G ++++S + +SG +A+ ++ MK+ G++ ++V YN VI
Sbjct: 252 AKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID 311
Query: 221 AVGVSEGVDF--AMRVYREMREMGCQPSVVT-------C--------------------- 250
A G G++F + + EM+ QP +T C
Sbjct: 312 ACGKG-GMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRI 370
Query: 251 -------NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILG 300
NT++ +C+ G++ A+ +LA+MP K +P+V++Y K E L
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALN 430
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
LF M I +Y LL + + G + ++M +G D YNAL+
Sbjct: 431 LFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYG 490
Query: 361 DKGMLDMARKYDEEM 375
+G D +K EM
Sbjct: 491 KQGKYDEVKKVFAEM 505
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 4/199 (2%)
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
S + + + GK A ++++ G V A++ +I A G S + A+ V+ M+E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV-PDVITYHCFFRCLEKP---R 296
G +P++VT N VI + G + A + ++ CV PD IT++ +
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWE 356
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
LFD M I + +Y LL + G + F + +M P+ +Y+ ++
Sbjct: 357 AARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVI 416
Query: 357 DALIDKGMLDMARKYDEEM 375
D G D A EM
Sbjct: 417 DGFAKAGRFDEALNLFGEM 435
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 176/396 (44%), Gaps = 18/396 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMK-DNPSSI 64
C N + A + N ++ F TYN +I L + L+ ++ ++ DN +
Sbjct: 148 CKVNRIEAATQVLNRMKAR-GFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDN--CM 204
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
P T+ I+ + + +NEAM ++ GL D +Y ++ +C+ V A EL
Sbjct: 205 PTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAEL 264
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
++ YN++LR + W + + EM RG + +YSI
Sbjct: 265 ITSLTSKGCKPDVIS------YNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSIL 318
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ +C+ G+ +A+ + K M +K + D +Y+ +I A+ +D A+ + M GC
Sbjct: 319 ISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC 378
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH----CFFRCLEKPREIL 299
P +V NT++ LC+NG +A + ++ GC P+V +Y+ + C ++ R L
Sbjct: 379 LPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRA-L 437
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
G+ MI G+ P TY L+ R G + + ME+ G P +YN ++ L
Sbjct: 438 GMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGL 497
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+D A EM KG +P E L++G
Sbjct: 498 CKVRRIDDAIGMFAEMIEKG--CRPNETTYILLIEG 531
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 114/238 (47%), Gaps = 3/238 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G+ K++ + M RG + D+ +Y+I + +C K A+K+ ++
Sbjct: 140 YNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLL 199
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
V+ Y +I A V G++ AM++ EM G P + T N +I+ +C+ G V
Sbjct: 200 LDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVE 259
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLL 321
A ++ + KGC PDVI+Y+ R K E L M G P TY +L+
Sbjct: 260 RAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILI 319
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R+G + V K M E +PD ++Y+ L+ AL +G LD+A + M + G
Sbjct: 320 SSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNG 377
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 93/229 (40%), Gaps = 37/229 (16%)
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVV---------------------------------- 213
CK+GK +++ + + KG DV+
Sbjct: 79 CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVF 138
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
AYN VI ++ A +V M+ G P +VT N +I LC ++ A VL ++
Sbjct: 139 AYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQL 198
Query: 274 PKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
C+P VITY E + L + M+ G+ P M TY ++R + G +
Sbjct: 199 LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMV 258
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ + GC PD +YN L+ A +++G D K EMF++G
Sbjct: 259 ERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 307
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 13/133 (9%)
Query: 253 VIKLL---CENGRVREAYAVLAEMPKKGCVPDVITYHCF------FRCLEKPREILGLFD 303
++KLL C+ G+ E+ L + KG PDVI F+ +EK ++
Sbjct: 71 LMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM---- 126
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
++ES P + Y ++ F + + V +M+ G PD YN ++ +L ++
Sbjct: 127 EILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRR 186
Query: 364 MLDMARKYDEEMF 376
L +A K +++
Sbjct: 187 KLGLALKVLDQLL 199
>gi|240256396|ref|NP_199195.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635652|sp|P0C8R0.1|PP416_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g43820
gi|332007631|gb|AED95014.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 546
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 167/368 (45%), Gaps = 12/368 (3%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKR 76
FF+W + T +Y+ ++ LG+ F +++ M + P+ I
Sbjct: 137 FFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVN-PDLECLTIAMDS 195
Query: 77 YVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSG 135
+V H V A+ F + + FG+K S+ L+ LCE HV A+ + + N+ F
Sbjct: 196 FVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDS 255
Query: 136 LVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK 195
YN+++ GW K+ + + +EM + G D SYS ++ + ++G+
Sbjct: 256 CS-------YNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRIND 308
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
+V+++ +K KG D YN +I + D +MR YR M + C+P++ T + ++
Sbjct: 309 SVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVS 368
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRP 312
L + +V +A + EM +G +P F + L P + ++ + ++G R
Sbjct: 369 GLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRI 428
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
Y +LL++ R+G + VW +M+E G D Y +VD L G L+ A
Sbjct: 429 SESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVM 488
Query: 373 EEMFAKGL 380
EE KG
Sbjct: 489 EEAMRKGF 496
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%)
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
+ Y+ ++ G K E +EEM RGV+ + ++ +C G P A+ +Y++
Sbjct: 361 ETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQK 420
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
+K G ++ AY +++ + + V+ EM+E G V ++ LC G
Sbjct: 421 SRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGH 480
Query: 263 VREAYAVLAEMPKKGCVPDVITY 285
+ A V+ E +KG P+ Y
Sbjct: 481 LENAVLVMEEAMRKGFCPNRFVY 503
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 176/438 (40%), Gaps = 67/438 (15%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C ++A+ F+ + C YN++I K + D + ++ R+K S P
Sbjct: 100 CEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKP 159
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELC 124
N +F + +A+ F ++ GLK +V+ CN L+ C + +A+ L
Sbjct: 160 NAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLL 219
Query: 125 F------------------------GENKNVG-FSGLVEMNKTKI----YNMILRGWFKM 155
G+ V F L + + YN I++G+ +
Sbjct: 220 HHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRC 279
Query: 156 SWWGKCREFWE----------------------------------EMDKRGVVKDLHSYS 181
+ + +E E ++ GVV D+ +YS
Sbjct: 280 GRLAEATQLFESTMTKESVPDVFTYNLLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYS 339
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
MD K+G+ KA++++ M+K G D V YN +I +G VD A+ + +M
Sbjct: 340 YLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRK 399
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EI 298
G P T N VI +L GR +AY+ M ++ PDV+TY+ L+K R E
Sbjct: 400 GIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEA 459
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
LFD M + P + T+ L+ + G + ++ ++G +P+ + YNAL+
Sbjct: 460 CDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISG 519
Query: 359 LIDKGMLDMARKYDEEMF 376
G +D + ++M
Sbjct: 520 FCRSGQVDKGYELFQDMI 537
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 152/323 (47%), Gaps = 11/323 (3%)
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQ 121
S+P+ T+ ++ + L EA+ F + ++ G+ D +Y L+DA + +A
Sbjct: 297 SVPDVFTYNLLIALCKSKQL-EEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKAL 355
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
E+ + K +G M T +YN+++ K + E E+M+++G++ D +Y+
Sbjct: 356 EVFYNMQK----AGC--MPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYN 409
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
I +D++ G+ KA + MK++ DVV YNT++ + D A ++ EM+
Sbjct: 410 IVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQAN 469
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI--- 298
C P + T T+I L + GR+ +A A + K G P+ Y+ + ++
Sbjct: 470 KCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKG 529
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
LF MIE P TY +L+ F R G + ++M G +P YN L+ +
Sbjct: 530 YELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRS 589
Query: 359 LIDKGMLDMARKYDEEMFAKGLS 381
L G ++ A +EM AKG +
Sbjct: 590 LSMAGQVEDAYTLFKEMIAKGFN 612
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 12/226 (5%)
Query: 165 WEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGV 224
++ + K G+ D H+ + + +CK G+ +L E+++KG+ + V I+A G
Sbjct: 6 YKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGR 65
Query: 225 SEGVDFAMRVYREMREMG-CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK-GCVPDV 282
+ +D AM + +MR CQP V + LCE RV +A + +M + C PDV
Sbjct: 66 AGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDV 125
Query: 283 ITYHCFFRCLEKPRE---ILGLFDRMIESG-IRP---KMDTYVMLLRKFGRWGFLRPVFV 335
+ Y+ K + L +F R+ + G +P DT V+ L K R
Sbjct: 126 VAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRA---TDALA 182
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
V+++M G D N L+ GML AR+ M A +
Sbjct: 183 VFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACA 228
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 5/208 (2%)
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK-GIKMDVVAYNTVIRAVGVSEGVDFAMRV 234
D +++ M +C+ + +A+ L+ +M++ DVVAYNT+I + D A+ +
Sbjct: 88 DTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDM 147
Query: 235 YREMREMG-CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC-- 291
+R +++ G C+P+ V+ +T++ LC+ R +A AV EM G DV + C
Sbjct: 148 FRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTC 207
Query: 292 -LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF 350
L R+ L M TY +L+ R G + V + GC+
Sbjct: 208 RLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAV 267
Query: 351 AYNALVDALIDKGMLDMARKYDEEMFAK 378
YN ++ I G L A + E K
Sbjct: 268 NYNFIIQGFIRCGRLAEATQLFESTMTK 295
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 119/283 (42%), Gaps = 17/283 (6%)
Query: 8 ANDWKRALE-FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
A +ALE F+N + C T YN +I LGK + D + L+ M + +P+
Sbjct: 348 AGRAAKALEVFYNMQKAGC--MPDTVVYNVLISCLGKQGKVDEALELLEDM-NRKGIMPD 404
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCF 125
T+ I+ + +A F + D V+Y L++ L + + EA +L F
Sbjct: 405 CRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDL-F 463
Query: 126 GE---NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
E NK M + ++ K E + K G + + Y+
Sbjct: 464 DEMQANKC--------MPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNA 515
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ C+SG+ K +L+++M + D + Y ++ AM + +EM G
Sbjct: 516 LISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREG 575
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
P++ T N +I+ L G+V +AY + EM KG PD+ TY
Sbjct: 576 HTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTY 618
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 105/232 (45%), Gaps = 8/232 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN VID+L ++ +++ MK S P+ T+ + +EA F++
Sbjct: 407 TYNIVIDVLSSCGRYEKAYSFFGMMKRRKHS-PDVVTYNTLLNGLKKLRRTDEACDLFDE 465
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + D ++ L+D L + + +A E ++ + + IYN ++ G
Sbjct: 466 MQANKCMPDLTTFGTLIDTLAKAGRMEDALE------QSARLVKMGHAPNSYIYNALISG 519
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + K E +++M + D +Y+I + + G A++L +EM ++G
Sbjct: 520 FCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPA 579
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
+ YN +IR++ ++ V+ A +++EM G P + T + + L N V
Sbjct: 580 LATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPNLSTPNKSV 631
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 123/240 (51%), Gaps = 3/240 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y ++L K S + + + +EM +G D+ +Y++ ++ +C+ G+ A++ K +
Sbjct: 70 YTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLP 129
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
G + + V+YN V++ + +E + A + EM + GC P+VVT N +I LC G V
Sbjct: 130 SYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVE 189
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
A VL ++PK GC P+ ++Y+ K +++ + D M+ G P + +Y LL
Sbjct: 190 PALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLL 249
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
R G + + ++++ GC+P +YN ++D L G A + EM +KGL
Sbjct: 250 TALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQ 309
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 118/241 (48%), Gaps = 12/241 (4%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G+ R EM V D ++Y+ + +C G+ A+ + EM
Sbjct: 3 YNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEML 59
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
++ DVV Y ++ A G AM++ EMR+ GC P +VT N V+ +C+ GRV
Sbjct: 60 RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVD 119
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL------EKPREILGLFDRMIESGIRPKMDTYV 318
+A L +P GC P+ ++Y+ + L E E++G M + G P + T+
Sbjct: 120 DAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMG---EMGQKGCPPNVVTFN 176
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
ML+ R G + P V +++ + GC+P+ +YN L+ A + +D A + + M ++
Sbjct: 177 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 236
Query: 379 G 379
G
Sbjct: 237 G 237
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 162/351 (46%), Gaps = 11/351 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +++ K + + L+ M+D P+ T+ ++ V++A+
Sbjct: 69 TYTILLEATCKRSGYKQAMKLLDEMRDK-GCTPDIVTYNVVVNGICQEGRVDDAIEFLKN 127
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
L +G + + VSY ++ LC + +A+EL GE G +NM++
Sbjct: 128 LPSYGCEPNTVSYNIVLKGLCTAERWEDAEEL-MGEMGQKGCP-----PNVVTFNMLISF 181
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ E E++ K G + SY+ + CK K KA+ M +G D
Sbjct: 182 LCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPD 241
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+V+YNT++ A+ S VD A+ + ++++ GC P +++ NTVI L + G+ +EA +L
Sbjct: 242 IVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLN 301
Query: 272 EMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM KG PD+ITY L ++ + + F ++ + GIRP Y ++ +
Sbjct: 302 EMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRR 361
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++ M GC P+E Y L++ L +G++ AR +E+ ++
Sbjct: 362 ETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRA 412
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 119/240 (49%), Gaps = 3/240 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++RG +EM +R V D+ +Y+I ++ CK +A+KL EM+
Sbjct: 35 YNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 94
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
KG D+V YN V+ + VD A+ + + GC+P+ V+ N V+K LC R
Sbjct: 95 DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWE 154
Query: 265 EAYAVLAEMPKKGCVPDVITYHCF--FRCLEKPRE-ILGLFDRMIESGIRPKMDTYVMLL 321
+A ++ EM +KGC P+V+T++ F C + E L + +++ + G P +Y LL
Sbjct: 155 DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLL 214
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
F + + M GC PD +YN L+ AL G +D+A + ++ KG +
Sbjct: 215 HAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCA 274
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 125/238 (52%), Gaps = 3/238 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G+ K + + ++ M RG D+ +Y+I + +C GK A ++ E+
Sbjct: 134 YNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELL 193
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K G K V+ Y +I A + ++ A+ ++ E+ G +P + T N +I+ +C+ G
Sbjct: 194 KDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMED 253
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRC-LEKPREILG--LFDRMIESGIRPKMDTYVMLL 321
A + + +GC PDV++Y+ R L K R G L M+ SG P + T+ +L+
Sbjct: 254 RALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILI 313
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
F R G +R V + M+E G +PD ++Y+ L+ A +G LD+A +Y E+M + G
Sbjct: 314 SSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDG 371
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 148/320 (46%), Gaps = 10/320 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ ++ M + A+ ++ A F+++ G D V+Y ++ +LC + EL
Sbjct: 129 PDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKL----EL 184
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + G T Y +++ + E ++E+ RG+ DL++Y+
Sbjct: 185 AFEVMDELLKDGCKPSVIT--YTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAI 242
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ +CK G +A+ + + +G DVV+YN ++R+ + R+ ++M GC
Sbjct: 243 IRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGC 302
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LG 300
+P+VVT + +I C GRVREA VL M +KG PD +Y K + +
Sbjct: 303 EPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIE 362
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
++M+ G P + Y +L ++G V++K++E+GC P AYN + AL
Sbjct: 363 YLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALW 422
Query: 361 DKGMLDMARKYDEEMFAKGL 380
G A + EM KG+
Sbjct: 423 SCGNKIKALEMISEMIRKGI 442
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 159/353 (45%), Gaps = 12/353 (3%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
AN A + F+ + + F+ TYN +I L + +L++ ++ + + P+
Sbjct: 144 ANQIDSANQVFDRMRSR-GFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCK-PSV 201
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFG 126
T+ I+ + + +NEA+ F++L GL+ ++ +Y ++ +C K +E + L F
Sbjct: 202 ITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGIC--KEGMEDRALDFV 259
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
+ S YN++LR + S W ++M G ++ ++SI +
Sbjct: 260 RH----LSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISS 315
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
C+ G+ +AV + + MK+KG+ D +Y+ +I A +D A+ +M GC P
Sbjct: 316 FCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPD 375
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFD 303
+V NT++ LC+ G A V ++ + GC P V Y+ F L + L +
Sbjct: 376 IVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMIS 435
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
MI GI P TY L+ R G + + ME P ++N ++
Sbjct: 436 EMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVL 488
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 119/277 (42%), Gaps = 49/277 (17%)
Query: 140 NKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKL 199
NKT + N+ F+ + + +D R D H + ++ C++GK +++
Sbjct: 37 NKTHLRNVTSSAEFR-------QPHFPNLDNR----DAHLMKL-LNRSCRAGKHNESLYF 84
Query: 200 YKEMKKKGIKMDVV----------------------------------AYNTVIRAVGVS 225
+ + KG K DVV +YN +I +
Sbjct: 85 LESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYGDPDVYSYNAMISGFSKA 144
Query: 226 EGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
+D A +V+ MR G P VVT N +I LC G++ A+ V+ E+ K GC P VITY
Sbjct: 145 NQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITY 204
Query: 286 HCFFRC--LE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE 342
LE + E L LFD ++ G+RP + TY ++R + G + +
Sbjct: 205 TILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSA 264
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
GC+PD +YN L+ + ++K + + ++M G
Sbjct: 265 RGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSG 301
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 7/222 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
PN T I+ + V EA+ + E GL D SY L+ A C+ + A E
Sbjct: 304 PNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEY 363
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
K V L ++ YN IL K + +E++D+ G + +Y+
Sbjct: 364 L---EKMVSDGCLPDIVN---YNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTM 417
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ G KA+++ EM +KGI D + YN++I + VD A+ + +M
Sbjct: 418 FSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRF 477
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
QP+V++ N V+ +C+ RV E +L M +KGC+P+ +Y
Sbjct: 478 QPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSY 519
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 171/362 (47%), Gaps = 34/362 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWN----LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
TYN V+ + K + W L+ MK++ P+ T+ + L EA
Sbjct: 209 TYNVVLHVYSKM---AVPWKEVVELVASMKEH-GVAPDRYTYNTLISCCRRRALYKEAAQ 264
Query: 89 TFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
F+++ G + D+V++ +L+D + + EA E+ E + VG V YN
Sbjct: 265 VFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEV-IQEMERVGCPPSV-----VTYNS 318
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++ + K + +EM+ +G+ D+ +Y+ + + ++GK A+ Y EM + G
Sbjct: 319 LISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNG 378
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
K ++ YN +I+ GV M V+ E+R G P +VT NT++ + +NG E
Sbjct: 379 CKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVS 438
Query: 268 AVLAEMPKKGCVPDVITY----HCFFRCLEKPREILGLFD-------RMIESGIRPKMDT 316
V EM K G +P+ TY + RC GLFD RM+E+GI P + T
Sbjct: 439 GVFKEMKKAGYIPERDTYVSLISSYSRC--------GLFDLAMQIYKRMMEAGIYPDVST 490
Query: 317 YVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
Y +L R G ++ +MEE C PDE++Y++L+ A + LD + ++++
Sbjct: 491 YNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIY 550
Query: 377 AK 378
++
Sbjct: 551 SE 552
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 128/275 (46%), Gaps = 39/275 (14%)
Query: 145 YNMILRGWFKMSW-WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
YN++L + KM+ W + E M + GV D ++Y+ + + +A +++ EM
Sbjct: 210 YNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEM 269
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
K G + D V +N+++ G + D A+ V +EM +GC PSVVT N++I ++G +
Sbjct: 270 KASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLL 329
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLE--------------------KPR------- 296
+A A+ EM KG PDV+TY L+ KP
Sbjct: 330 EQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNAL 389
Query: 297 -----------EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
E++ +FD + +G P + T+ LL FG+ G V V+K+M++ G
Sbjct: 390 IKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGY 449
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
P+ Y +L+ + G+ D+A + + M G+
Sbjct: 450 IPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGI 484
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 111/259 (42%), Gaps = 39/259 (15%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK--------- 195
Y ++ + + + + M GV + +Y++ + + K PWK
Sbjct: 175 YTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASM 234
Query: 196 ---------------------------AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV 228
A +++ EMK G + D V +N+++ G +
Sbjct: 235 KEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRH 294
Query: 229 DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
D A+ V +EM +GC PSVVT N++I ++G + +A A+ EM KG PDV+TY
Sbjct: 295 DEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTL 354
Query: 289 FRCLEKPREILGL---FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
L++ +I +D M+ +G +P + TY L++ G G + V+ ++ G
Sbjct: 355 ISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGF 414
Query: 346 SPDEFAYNALVDALIDKGM 364
PD +N L+ G+
Sbjct: 415 VPDIVTWNTLLAVFGQNGL 433
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 10/233 (4%)
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
E+ GV+ + + +M ++G+ +A L D AY ++ A +
Sbjct: 131 ELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPGP----DAGAYTALVSAFSRAG 186
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV-REAYAVLAEMPKKGCVPDVITY 285
A+ V+R M + G QP++VT N V+ + + +E ++A M + G PD TY
Sbjct: 187 RFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTY 246
Query: 286 HCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE 342
+ C + +E +FD M SG P T+ LL +G+ V ++ME
Sbjct: 247 NTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMER 306
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+GC P YN+L+ + + G+L+ A +EM KG+ KP T L+ G
Sbjct: 307 VGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGI--KPDVVTYTTLISG 357
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/446 (21%), Positives = 175/446 (39%), Gaps = 86/446 (19%)
Query: 11 WKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
+K A + F+ ++ F T+NS++D+ GK D + +I M + P+ T+
Sbjct: 259 YKEAAQVFDEMKAS-GFEPDKVTFNSLLDVYGKARRHDEAIEVIQEM-ERVGCPPSVVTY 316
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDAL------------------ 111
+ YV L+ +A+ +++ G+K D V+Y L+ L
Sbjct: 317 NSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVR 376
Query: 112 -------CEYKHVIEAQEL---------CFGENKNVGFSGLVEMNKTKIYNMILRGWFKM 155
C Y +I+ + F E ++ GF + +N +L + +
Sbjct: 377 NGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGF-----VPDIVTWNTLLAVFGQN 431
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
+ ++EM K G + + +Y + + G A+++YK M + GI DV Y
Sbjct: 432 GLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTY 491
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI--------------------- 254
N V+ A+ + A +++ EM E C+P + ++++
Sbjct: 492 NAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYS 551
Query: 255 -----------KLLCENGRVR---EAYAVLAEMPKKGCVPDV------ITYHCFFRCLEK 294
L+ N +V EA E+ +K C D+ ++ + R + K
Sbjct: 552 ERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRK 611
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
+IL L M ES I TY L+ + R G + +++ G PD ++YN
Sbjct: 612 VEKILSL---MKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNT 668
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGL 380
++ A KG + A + EM GL
Sbjct: 669 VIYAYGRKGQMKEASRLFSEMKCSGL 694
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 71/131 (54%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ + ++ KC E+ GV D +SY+ + + G+ +A +L+ EMK
Sbjct: 631 YNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMK 690
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
G+K DVV YN +++ + + A+ + R M GC+P+ T N++++ C NG++
Sbjct: 691 CSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLT 750
Query: 265 EAYAVLAEMPK 275
+A ++ +P+
Sbjct: 751 DAKIFVSNLPQ 761
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 136/316 (43%), Gaps = 11/316 (3%)
Query: 32 DTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
DTY S+I + FDL+ + RM + P+ +T+ + +A F
Sbjct: 454 DTYVSLISSYSRCGLFDLAMQIYKRMME-AGIYPDVSTYNAVLSALARGGRWEQAEKLFA 512
Query: 92 KLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
+++E K DE SY +L+ A K + + + L + +S +E + + ++L
Sbjct: 513 EMEERDCKPDEYSYSSLLHAYANAKRLDKMKALS-----DDIYSERIEPHNWLVKTLVLV 567
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
K++ + + + E+ ++ D++ + + I K+ K K+ MK+ I +
Sbjct: 568 NS-KVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINL 626
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
YN+++ + + E++ G +P + NTVI G+++EA +
Sbjct: 627 SAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLF 686
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
+EM G PDV+TY+ F + E + L M+ G +P TY ++ + R
Sbjct: 687 SEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRN 746
Query: 328 GFLRPVFVVWKKMEEL 343
G L + + +L
Sbjct: 747 GKLTDAKIFVSNLPQL 762
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 150/386 (38%), Gaps = 66/386 (17%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++I + G +F + ++ + +P+ T+ + + L +E G F +
Sbjct: 385 TYNALIKMHGVRGKFPEMMAVFDELR-SAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKE 443
Query: 93 LDEFG----------LKDEVSYCNLVD-ALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
+ + G L S C L D A+ YK ++EA G +V
Sbjct: 444 MKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEA-----GIYPDVS--------- 489
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM----------------- 184
YN +L + W + + + EM++R D +SYS +
Sbjct: 490 --TYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSD 547
Query: 185 DIMCKSGKP--W----------------KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
DI + +P W +A K + E+++K +D+ N ++ G +
Sbjct: 548 DIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNR 607
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
V ++ M+E S T N+++ + G + +L E+ G PD +Y+
Sbjct: 608 MVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYN 667
Query: 287 CFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
+ +E LF M SG++P + TY + ++ + + + M
Sbjct: 668 TVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQ 727
Query: 344 GCSPDEFAYNALVDALIDKGMLDMAR 369
GC P+E YN++V+ G L A+
Sbjct: 728 GCKPNERTYNSIVEGYCRNGKLTDAK 753
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 8/148 (5%)
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP 295
RE+ G T I+++ GR+ EA A+L P PD Y +
Sbjct: 130 RELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPG----PDAGAYTALVSAFSRA 185
Query: 296 ---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL-RPVFVVWKKMEELGCSPDEFA 351
R+ + +F RM++SG++P + TY ++L + + + V + M+E G +PD +
Sbjct: 186 GRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYT 245
Query: 352 YNALVDALIDKGMLDMARKYDEEMFAKG 379
YN L+ + + A + +EM A G
Sbjct: 246 YNTLISCCRRRALYKEAAQVFDEMKASG 273
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 172/380 (45%), Gaps = 14/380 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A++ F V + T TYNS++ L + D + + +M D+ + P
Sbjct: 198 CRVEKTDEAMKLFKDVIAKGYMPDTV-TYNSILLGLARKSNMDEAEEMFKKMVDSGCA-P 255
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELC 124
N AT+ I+ + + + + ++ E +V CN ++D LC+ K V +A ++
Sbjct: 256 NGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKV- 314
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
E +G + YN++L G K + K E + M G D+ SYS+ +
Sbjct: 315 LEEMSKIG-----AVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVL 369
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ +CK+ K A L+ M ++ + DVV +N ++ + + +D A + M E
Sbjct: 370 NGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVL 429
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGL 301
P VTC T++ LC + R EA + M +KG V DV+ ++ C E K + L
Sbjct: 430 PDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLF 489
Query: 302 FDRMIESG--IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
F M++S P + TY L+ G + +++M GC+PD AYN L++ L
Sbjct: 490 FKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGL 549
Query: 360 IDKGMLDMARKYDEEMFAKG 379
+G A + + M KG
Sbjct: 550 RKQGRHIQADRLTQAMKEKG 569
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 164/371 (44%), Gaps = 16/371 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN+++ L + + + M S P+ + + V EA G F
Sbjct: 117 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYS-PDVVAYNGLLDALYKEGKVAEAWGLFKT 175
Query: 93 LDEFGLK---DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+D K D ++Y L+D C + EA +L F + G+ M T YN IL
Sbjct: 176 MDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKL-FKDVIAKGY-----MPDTVTYNSIL 229
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G + S + E +++M G + +YSI + C+ G + ++LY+EM +K
Sbjct: 230 LGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFS 289
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
DV+ N VI + ++ VD A +V EM ++G P VVT N ++ LC+ V +A+ +
Sbjct: 290 PDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHEL 349
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGR 326
+ M GC PD+++Y L K ++ LFDRMIE + P + T+ +L+ +
Sbjct: 350 FSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCK 409
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPRE 386
G L + M E PD L+ L D A + + M KG A +
Sbjct: 410 AGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVA---D 466
Query: 387 ELGTKLVQGGL 397
L +V GL
Sbjct: 467 VLPHNIVLAGL 477
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 121/239 (50%), Gaps = 9/239 (3%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y+ I+ G K + E EEM ++GV D+ +Y+I +D +C++GK +A +L+ +M
Sbjct: 13 YSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMI 72
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
++G + VAYN +I + E ++ A ++ EM G +P +T NT++ LC G+V
Sbjct: 73 ERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVS 132
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDR--MIESGIRPKMDTYVM 319
EA MP +G PDV+ Y+ L K ++ GLF M + + P + TY
Sbjct: 133 EAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNT 192
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
L+ F R ++K + G PD YN+++ L K +D A EEMF K
Sbjct: 193 LIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEA----EEMFKK 247
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 148/324 (45%), Gaps = 18/324 (5%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
P+ T+ + V EA+ ++ E G+ +V +Y +VD LC V EA EL
Sbjct: 8 PDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADEL 67
Query: 124 CFGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
F ++E T YN ++ G K + + EEM +G D +Y
Sbjct: 68 ---------FHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITY 118
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR--EM 238
+ + +C+ GK +A + + M +G DVVAYN ++ A+ V A +++ +M
Sbjct: 119 NTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDM 178
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR-- 296
+ P ++T NT+I C + EA + ++ KG +PD +TY+ L +
Sbjct: 179 ADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNM 238
Query: 297 -EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
E +F +M++SG P TY ++L R G + ++++M E SPD NA+
Sbjct: 239 DEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAV 298
Query: 356 VDALIDKGMLDMARKYDEEMFAKG 379
+D L +D A K EEM G
Sbjct: 299 IDMLCKAKKVDDAHKVLEEMSKIG 322
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 108/217 (49%), Gaps = 5/217 (2%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M ++G D+ +YS + +CK+GK +A+++ +EM +KG+ DV Y ++ + +
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
VD A ++ +M E GC + V N +I LC++ + AY +L EM KG PD ITY+
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 288 FFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKME--E 342
L K E FD M G P + Y LL + G + + ++K M+ +
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+PD YN L+D D A K +++ AKG
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKG 217
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 141/308 (45%), Gaps = 34/308 (11%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + R LE + + T+ F+ N+VID+L K + D + ++ M ++P
Sbjct: 268 CRVGNMARCLELYEEM-TEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMS-KIGAVP 325
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ I+ +LV++A F+ + + G D VSY +++ LC+ V +A+ L
Sbjct: 326 DVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLF 385
Query: 125 --FGENK--------NVGFSGLVEMNK----------TKIYNMILRGWFKMSWW-GKCRE 163
E K N+ GL + K +N++ G + G CR+
Sbjct: 386 DRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRD 445
Query: 164 --------FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG--IKMDVV 213
++ M ++G V D+ ++I + +C+ GK +A+ +K M K DVV
Sbjct: 446 KRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVV 505
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
Y T++ A+ + VD A+ +++M GC P V NT++ L + GR +A + M
Sbjct: 506 TYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAM 565
Query: 274 PKKGCVPD 281
+KG + D
Sbjct: 566 KEKGFLSD 573
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EK 294
M E G +P VVT +T+I LC+ G+V EA ++ EM +KG PDV TY L K
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
E LF +MIE G Y L+ + + + + ++M G PD YN
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLS 381
++ L G + A+++ + M ++G S
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYS 147
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%)
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
M E G P + TY ++ + G + + ++M E G +PD Y +VD L G
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 365 LDMARKYDEEMFAKGLSA 382
+D A + +M +G SA
Sbjct: 61 VDEADELFHKMIERGCSA 78
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 158/383 (41%), Gaps = 58/383 (15%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+ ++D K + + L+ M+ P+ T+ ++ V+EA+ +
Sbjct: 199 TYSILLDATCKASGYRQAMVLLDEMRAKGCE-PDIVTYNVLINAMCNEGDVDEALNILSD 257
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK------IY 145
L G K D V+Y ++ +LC + E +EL EM K +
Sbjct: 258 LPSHGCKPDAVTYTPVLKSLCGSERWKEVEEL------------FAEMASNKCAPDEVTF 305
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N I+ + + + + M + G + D+ +YS +D +C G+ AV+L +K
Sbjct: 306 NTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKS 365
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G K D +AY TV++ + E + A + EM C P VT NTVI LC+ G V
Sbjct: 366 YGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDR 425
Query: 266 AYAVLAEMPKKGCVPDVITYH------CFFRCLEKPREILG------------------- 300
A V+ +M + GC PD++TY+ C RC++ E+L
Sbjct: 426 AIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLK 485
Query: 301 -------------LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
L M+ S P T+ ++ + G L K M E GC P
Sbjct: 486 GLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIP 545
Query: 348 DEFAYNALVDALIDKGMLDMARK 370
++ YN +VDAL+ G A K
Sbjct: 546 NQSTYNIVVDALLKAGKTQEALK 568
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 143/321 (44%), Gaps = 12/321 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL 123
P+ TF + LV+ A+ + + E G + D V+Y +++D LC+ V +A EL
Sbjct: 300 PDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVEL 359
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
K+ G T Y +L+G + W E EM D +++
Sbjct: 360 -LSRLKSYGCKP-----DTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTV 413
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ +C+ G +A+K+ ++M + G D+V YN++I + +D AM + ++ GC
Sbjct: 414 IASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGC 473
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFD 303
+P +VT NT++K LC R +A ++ M C PD T++ L + +L +
Sbjct: 474 KPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIE 533
Query: 304 R---MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
M E+G P TY +++ + G + + M +PD YN ++ +
Sbjct: 534 TLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMT--NGTPDLITYNTVISNIT 591
Query: 361 DKGMLDMARKYDEEMFAKGLS 381
G ++ A M + GLS
Sbjct: 592 KAGKMEEALDLLRVMVSNGLS 612
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 147/347 (42%), Gaps = 51/347 (14%)
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNV 131
I+ KR + V +A F L V+Y +V+ C + +A+ L
Sbjct: 103 ILIKRLCSGGRVADAERVFATLGASATV--VTYNTMVNGYCRAGRIEDARRL-------- 152
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
SG+ T +N ++R +++M RG + +YSI +D CK+
Sbjct: 153 -ISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKAS 211
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
+A+ L EM+ KG + D+V YN +I A+ VD A+ + ++ GC+P VT
Sbjct: 212 GYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYT 271
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIES 308
V+K LC + R +E + AEM C PD +T++ L + + + + D M E
Sbjct: 272 PVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEH 331
Query: 309 GIRPKMDTY----------------VMLLRKFGRWGFLRPVFVV-------------WKK 339
G P + TY V LL + +G +P + W+
Sbjct: 332 GCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYG-CKPDTIAYTTVLKGLCSIEQWEH 390
Query: 340 MEEL-------GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
EEL C PDE +N ++ +L KG++D A K E+M G
Sbjct: 391 AEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENG 437
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 150/346 (43%), Gaps = 17/346 (4%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRM--KDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
T Y +V+ L +++ + L+ M D P P+ TF + LV+ A+
Sbjct: 372 TIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCP---PDEVTFNTVIASLCQKGLVDRAIK 428
Query: 89 TFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
++ E G D V+Y +++D LC + + +A EL ++ G + +N
Sbjct: 429 VVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMEL-LSNLQSYGCKPDI-----VTFNT 482
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
+L+G + W + M D +++ + +C+ G +A++ K M + G
Sbjct: 483 LLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENG 542
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ YN V+ A+ + A+++ M P ++T NTVI + + G++ EA
Sbjct: 543 CIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEAL 600
Query: 268 AVLAEMPKKGCVPDVITYH--CFFRCLEKPRE-ILGLFDRMIESGIRPKMDTYVMLLRKF 324
+L M G PD ITY + C E + + + R+ + G+ P Y +L F
Sbjct: 601 DLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGF 660
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
+ + M GC PDE Y L++AL + +LD A++
Sbjct: 661 CQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQ 706
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 138/325 (42%), Gaps = 16/325 (4%)
Query: 6 CYANDWKRALEFF-NWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C W+ A E V +DC T +N+VI L + D + ++ +M +N +
Sbjct: 383 CSIEQWEHAEELMAEMVCSDCPPDEVT--FNTVIASLCQKGLVDRAIKVVEQMSENGCN- 439
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ + +++AM + L +G K D V++ L+ LC +A++L
Sbjct: 440 PDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQL 499
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
N+ S T +N ++ + + E + M + G + + +Y+I
Sbjct: 500 MV----NMMHSDCPPDATT--FNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIV 553
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D + K+GK +A+KL M D++ YNTVI + + ++ A+ + R M G
Sbjct: 554 VDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGL 611
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPREI-LG 300
P +T ++ +C A +L + G PD Y+ C +I +
Sbjct: 612 SPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAID 671
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFG 325
F M+ SG P TY++LL
Sbjct: 672 CFAHMVSSGCMPDESTYIILLEALA 696
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 37/198 (18%)
Query: 219 IRAVGVSEGVDFAMRVYREMREMG----CQP-SVVTCNTVIKLLCENGRVREAYAVLAEM 273
+R++ E +D A+ + + G C P VV CN +IK LC GRV +A V A +
Sbjct: 65 LRSLIQREEIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVFATL 124
Query: 274 PKKGCV-----------------------------PDVITYHCFFRCL---EKPREILGL 301
V PD T++ R L + + L +
Sbjct: 125 GASATVVTYNTMVNGYCRAGRIEDARRLISGMPFPPDTFTFNPLIRALCVRGRVPDALAV 184
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
FD M+ G P + TY +LL + R V+ +M GC PD YN L++A+ +
Sbjct: 185 FDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCN 244
Query: 362 KGMLDMARKYDEEMFAKG 379
+G +D A ++ + G
Sbjct: 245 EGDVDEALNILSDLPSHG 262
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 91/230 (39%), Gaps = 14/230 (6%)
Query: 49 LSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNL 107
L N++H D P P+ TF + L+ +A+ T + E G + ++ +Y +
Sbjct: 499 LMVNMMH--SDCP---PDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIV 553
Query: 108 VDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEE 167
VDAL + EA +L G G L+ YN ++ K + +
Sbjct: 554 VDALLKAGKTQEALKLLSGMTN--GTPDLI------TYNTVISNITKAGKMEEALDLLRV 605
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M G+ D +Y +C+ +A+++ ++ G+ D YN ++ +
Sbjct: 606 MVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWR 665
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
D A+ + M GC P T +++ L + EA +L + G
Sbjct: 666 TDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLG 715
>gi|18396782|ref|NP_566222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|79312733|ref|NP_001030630.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546763|sp|Q9M8W9.2|PP211_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04130, mitochondrial; Flags: Precursor
gi|332640519|gb|AEE74040.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332640520|gb|AEE74041.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 508
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 177/386 (45%), Gaps = 16/386 (4%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+ +DW+ AL W E+ H++D Y+ +DILGK ++D + RM+ + N
Sbjct: 97 FRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLN 156
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV-DALCEYKHVIEAQELCF 125
T + +R+ A EA+G F++L EFGL+ NL+ D LC+ K V +A+ +
Sbjct: 157 --TVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLL 214
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
++ + +N+ + GW K + + +EM G + SY+ +
Sbjct: 215 QLKSHITPNA-------HTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIR 267
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
C+ + K ++ EM+ G + + Y T++ ++ + + A+RV M+ GC+P
Sbjct: 268 CYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKP 327
Query: 246 SVVTCNTVIKLLCENGRVREAYAVL-AEMPKKGCVPDVITYHCFFRCL---EKPREILGL 301
+ N +I L GR+ EA V EMP+ G + TY+ ++ + + L
Sbjct: 328 DSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIEL 387
Query: 302 FDRMIESGI-RPKMDTYVMLLRKFGRWGFLRPVFVVWKKM-EELGCSPDEFAYNALVDAL 359
M S + P + TY LLR + G + V + K+M + S DE Y L+ L
Sbjct: 388 LKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRL 447
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPR 385
M + A EEM ++ ++ + R
Sbjct: 448 CRANMCEWAYCLFEEMISQDITPRHR 473
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 151/324 (46%), Gaps = 21/324 (6%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-------DEVSYCNLVDALCEYKHV 117
P+ TF I+ A ++EA+ F++L G D V + L+D LC+
Sbjct: 314 PSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGK- 372
Query: 118 IEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
E L E +G + T YN ++ G+FK + + E + +M++ GV ++
Sbjct: 373 -EEDGLSLLEEMKMGN---INRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNV 428
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
+ + +D +CK G+ +AV+ + EMK KG+K + Y +I A ++ AM+ + E
Sbjct: 429 ITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEE 488
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG------CVPDVITYHCFFRC 291
M GC P V ++I LC GR+ +A V++++ G C +I+ C +
Sbjct: 489 MLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKK 548
Query: 292 LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFA 351
LE+ E+L M E+G++P TY L+ G+ G V +KM + G P
Sbjct: 549 LERVYELL---TEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVT 605
Query: 352 YNALVDALIDKGMLDMARKYDEEM 375
Y A++ A K +D K EM
Sbjct: 606 YGAIIHAYCSKKNVDEGMKIFGEM 629
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 159/377 (42%), Gaps = 24/377 (6%)
Query: 6 CYANDWKRALEFF---------NWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHR 56
C A AL+ F NWV + +N++ID L K + + +L+
Sbjct: 327 CKARRIDEALQVFDRLRGKGGSNWVGVEPDVV----LFNTLIDGLCKVGKEEDGLSLLEE 382
Query: 57 MKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYK 115
MK + PN T+ + + A + A F +++E G++ V N LVD LC++
Sbjct: 383 MKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHG 442
Query: 116 HVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVK 175
V A E F E K G G Y ++ + ++ + + +EEM G
Sbjct: 443 RVHRAVEF-FNEMKGKGLKG-----NAATYTALISAFCGVNNINRAMQCFEEMLSSGCSP 496
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
D Y + +C +G+ A + ++K G +D YN +I + ++ +
Sbjct: 497 DAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELL 556
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE 293
EM E G +P +T NT+I L + G A V+ +M K+G P V+TY C +
Sbjct: 557 TEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSK 616
Query: 294 KP-REILGLFDRMIE-SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFA 351
K E + +F M S + P Y +L+ R + + + M+ P+
Sbjct: 617 KNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTT 676
Query: 352 YNALVDALIDKGMLDMA 368
YNA++ + DK ML A
Sbjct: 677 YNAILKGVRDKKMLHKA 693
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 144/348 (41%), Gaps = 12/348 (3%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T TYN +ID K FD + L +M + PN T + V+ A+ F
Sbjct: 393 TVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQ-PNVITLNTLVDGLCKHGRVHRAVEFF 451
Query: 91 NKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
N++ GLK + +Y L+ A C ++ A + CF E + G S +Y ++
Sbjct: 452 NEMKGKGLKGNAATYTALISAFCGVNNINRAMQ-CFEEMLSSGCSP-----DAVVYYSLI 505
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G ++ G D Y++ + CK K + +L EM++ G+K
Sbjct: 506 SGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVK 565
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
D + YNT+I +G + A +V +M + G +PSVVT +I C V E +
Sbjct: 566 PDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKI 625
Query: 270 LAEMPKKGCV-PDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFG 325
EM V P+ + Y+ L + ++ + L + M +RP TY +L+
Sbjct: 626 FGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVR 685
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDE 373
L F + +M E C PD L + L G ++ + + E
Sbjct: 686 DKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEKLKHFVE 733
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 89/211 (42%), Gaps = 33/211 (15%)
Query: 172 GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI-KMDVVAYNTVIRAVGVSEGVDF 230
GV D+ ++ +D +CK GK + L +EMK I + + V YN +I + D
Sbjct: 352 GVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDR 411
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR 290
A ++R+M E G QP+V+T NT++ LC++GRV A EM KG
Sbjct: 412 AHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKG------------- 458
Query: 291 CLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF 350
++ TY L+ F + +++M GCSPD
Sbjct: 459 -------------------LKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAV 499
Query: 351 AYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
Y +L+ L G ++ A ++ G S
Sbjct: 500 VYYSLISGLCIAGRMNDASVVVSKLKLAGFS 530
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 178/424 (41%), Gaps = 65/424 (15%)
Query: 13 RALEFFNWVETDC--HFTHT-TDTYNSVIDILGKFFEFDLSWNLIHRMK--DNPSSIPNH 67
++L+F ++ H H+ + + +++ + +HR + +P+
Sbjct: 82 KSLQFLKYLSAKAPQHHPHSLSSVFQGSLELASRHPNSQTHLLSLHRFRKSTHPTLPLTP 141
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEA-QELCFG 126
+ ++ + A LVN+++ FN+LD ++ + L+ L + +A L
Sbjct: 142 KSASLLLQCLENARLVNDSLLLFNQLDPSSKSPQLCH-GLLRVLLKSGRAGDALHVLDEM 200
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
N GFS E+ ++ ++R G+ ++ +RGV D + +
Sbjct: 201 PQANSGFSVTGEI----VFGELVRSGRSFPD-GEVVGLVAKLGERGVFPDGFKLTQLVGK 255
Query: 187 MC---KSGKPWKAV--------------------------------KLYKEMKKKGIKMD 211
+C K+G W+ + +L EM+K+ I+
Sbjct: 256 LCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPS 315
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMRE------MGCQPSVVTCNTVIKLLCENGRVRE 265
VV + ++ + + +D A++V+ +R +G +P VV NT+I LC+ G+ +
Sbjct: 316 VVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEED 375
Query: 266 AYAVLAEMPKKGCV--PDVITYHC----FFRC--LEKPREILGLFDRMIESGIRPKMDTY 317
++L EM K G + P+ +TY+C FF+ ++ E LF +M E G++P + T
Sbjct: 376 GLSLLEEM-KMGNINRPNTVTYNCLIDGFFKAGNFDRAHE---LFRQMNEEGVQPNVITL 431
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
L+ + G + + +M+ G + Y AL+ A ++ A + EEM +
Sbjct: 432 NTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLS 491
Query: 378 KGLS 381
G S
Sbjct: 492 SGCS 495
>gi|222423065|dbj|BAH19514.1| AT3G04130 [Arabidopsis thaliana]
Length = 508
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 177/386 (45%), Gaps = 16/386 (4%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+ +DW+ AL W E+ H++D Y+ +DILGK ++D + RM+ + N
Sbjct: 97 FRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLN 156
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV-DALCEYKHVIEAQELCF 125
T + +R+ A EA+G F++L EFGL+ NL+ D LC+ K V +A+ +
Sbjct: 157 --TVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLL 214
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
++ + +N+ + GW K + + +EM G + SY+ +
Sbjct: 215 QLKSHITPNA-------HTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIR 267
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
C+ + K ++ EM+ G + + Y T++ ++ + + A+RV M+ GC+P
Sbjct: 268 CYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKP 327
Query: 246 SVVTCNTVIKLLCENGRVREAYAVL-AEMPKKGCVPDVITYHCFFRCL---EKPREILGL 301
+ N +I L GR+ EA V EMP+ G + TY+ ++ + + L
Sbjct: 328 DSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIEL 387
Query: 302 FDRMIESGI-RPKMDTYVMLLRKFGRWGFLRPVFVVWKKM-EELGCSPDEFAYNALVDAL 359
M S + P + TY LLR + G + V + K+M + S DE Y L+ L
Sbjct: 388 LKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRL 447
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPR 385
M + A EEM ++ ++ + R
Sbjct: 448 CRANMCEWAYCLFEEMISQDITPRHR 473
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 174/372 (46%), Gaps = 20/372 (5%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWN----LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNE 85
T TYN ++++ GK + WN L+ RMK + P+ T+ + +L E
Sbjct: 234 TLITYNVILNVYGKM---GMPWNKMVGLVDRMK-SAGIAPDSYTYNTLISCCRRGNLYEE 289
Query: 86 AMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI 144
A G ++ G D+V+Y L+D + + EA E+ N +V
Sbjct: 290 AAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIV------T 343
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ + + E +M ++G+ D+ +Y+ + K+GK AV++++EM+
Sbjct: 344 YNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMR 403
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+G K ++ +N +I+ G M+V+ +++ C P +VT NT++ + +NG
Sbjct: 404 NEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDS 463
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLL 321
E V EM + G VP+ T++ + + + ++ RM+E+G+ P + +Y +L
Sbjct: 464 EVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVL 523
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
R G + V +M++ C P+E Y +L+ A + ++ EE+++ +
Sbjct: 524 AALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGII- 582
Query: 382 AKPREELGTKLV 393
+PR L LV
Sbjct: 583 -EPRAVLLKTLV 593
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 171/391 (43%), Gaps = 12/391 (3%)
Query: 14 ALEFFNWVET--DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
AL F WV + +I ILGK + +L+H + + + +A +
Sbjct: 146 ALRVFEWVRNRKESELLLNGSIIAVIISILGKGGRVSAAASLLHNLCKDGFDVDVYA-YT 204
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNV 131
M + + EA+ F K++E G K + N++ L Y + G +
Sbjct: 205 SMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVI--LNVYGKMGMPWNKMVGLVDRM 262
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
+G+ + T YN ++ + + + + +EM G D +Y+ +D+ KS
Sbjct: 263 KSAGIAPDSYT--YNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSR 320
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
+ +A+++ +EM+ G +V YN++I A ++ A+ + +M E G +P V T
Sbjct: 321 RSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYT 380
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC---LEKPREILGLFDRMIES 308
T++ + G+ + A + EM +GC P++ T++ + K E++ +F+ +
Sbjct: 381 TLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTF 440
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
P + T+ LL FG+ G V V+K+M+ G P+ +N L+ + G D A
Sbjct: 441 QCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQA 500
Query: 369 RKYDEEMFAKGLSA--KPREELGTKLVQGGL 397
+ M G++ + L +GGL
Sbjct: 501 MAVYKRMLEAGVNPDLSSYNAVLAALARGGL 531
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 136/295 (46%), Gaps = 11/295 (3%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F DT+N++I + FD + + RM + + P+ +++ + L ++
Sbjct: 477 FVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVN-PDLSSYNAVLAALARGGLWKQS 535
Query: 87 MGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
++ + K +E++YC+L+ A Y + E + +C + +SG++E +
Sbjct: 536 EKVLAEMKDGRCKPNELTYCSLLHA---YANGKEIERMCALAEEI--YSGIIEPRAVLLK 590
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
++L K + + E+ +RG D+ + + + I + KA ++ MK+
Sbjct: 591 TLVLVNS-KCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKR 649
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G + YN+++ S + + + RE+ G +P +++ NTVI C NGR+R+
Sbjct: 650 GGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRD 709
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFD---RMIESGIRPKMDTY 317
A VL+EM + G PD+ITY+ F + D MI+ G +P TY
Sbjct: 710 ASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTY 764
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 165/400 (41%), Gaps = 60/400 (15%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F+ TYN+++D+ GK + ++ M+ N P+ T+ + Y L+ +A
Sbjct: 302 FSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGN-GCPPSIVTYNSLISAYARDGLLEDA 360
Query: 87 MGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVG-------FSGLVE 138
+ N++ E G+K +V +Y L+ E +A F E +N G F+ L++
Sbjct: 361 LELKNQMVEKGIKPDVFTYTTLLSGF-EKAGKDKAAVQIFEEMRNEGCKPNICTFNALIK 419
Query: 139 MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK 198
M+ RG F + + +E++ D+ +++ + + ++G +
Sbjct: 420 MHGN-------RGKFT-----EMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSG 467
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
++KEMK+ G + +NT+I + D AM VY+ M E G P + + N V+ L
Sbjct: 468 VFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALA 527
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITY----HCF----------------FRCLEKPREI 298
G +++ VLAEM C P+ +TY H + + + +PR +
Sbjct: 528 RGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAV 587
Query: 299 L------------------GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
L F + + G P + T ++ +GR + + M
Sbjct: 588 LLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCM 647
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ G +P YN+L+ + + + E+ AKG+
Sbjct: 648 KRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGI 687
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/405 (20%), Positives = 154/405 (38%), Gaps = 53/405 (13%)
Query: 4 LSCYAND--WKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+S YA D + ALE N + + TY +++ K + + + M+ N
Sbjct: 348 ISAYARDGLLEDALELKNQM-VEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMR-NE 405
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQ 121
PN TF + K + E M F + F ++ N + ++ +
Sbjct: 406 GCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEV 465
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
F E K GF + + +N ++ + + + + ++ M + GV DL SY+
Sbjct: 466 SGVFKEMKRAGF-----VPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYN 520
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA-------------------- 221
+ + + G ++ K+ EMK K + + Y +++ A
Sbjct: 521 AVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSG 580
Query: 222 ------------VGVSEGVDFAM---RVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
V V+ D M R + E+R+ G P + T N ++ + V +A
Sbjct: 581 IIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKA 640
Query: 267 YAVLAEMPKKGCVPDVITYHCFF------RCLEKPREILGLFDRMIESGIRPKMDTYVML 320
+L M + G P + TY+ E+ EIL ++ GIRP + +Y +
Sbjct: 641 NEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEIL---REILAKGIRPDIISYNTV 697
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
+ + R G +R V +M E G +PD YN + + M
Sbjct: 698 IYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMF 742
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 85/185 (45%), Gaps = 5/185 (2%)
Query: 82 LVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
L+ E F +L + G +++ N + ++ + ++ K GF+ +
Sbjct: 601 LLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSL---- 656
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
YN ++ + + + + + E E+ +G+ D+ SY+ + C++G+ A ++
Sbjct: 657 -TTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLS 715
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
EM++ G D++ YNT I + A+ V M + GC+P+ T N+++ C+
Sbjct: 716 EMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLN 775
Query: 262 RVREA 266
R EA
Sbjct: 776 RRDEA 780
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 129/244 (52%), Gaps = 9/244 (3%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+++++ G K+ + K + E+M G + +Y+ +D CK+GK +KA L KEM
Sbjct: 232 FDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMV 291
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K I + + +N +I E V A +V+ EM+ G QP+VVT N++I LC NG++
Sbjct: 292 AKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLD 351
Query: 265 EAYAVLAEMPKKGCVPDVITYH------CFFRCLEKPREILGLFDRMIESGIRPKMDTYV 318
EA + +M G P+V+TY+ C + L++ RE+L D + + G+ P + T+
Sbjct: 352 EALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREML---DDIGKRGLAPNVITFN 408
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
L+ +G+ G + F++ M + G P+ YN L+ +G + ARK +EM
Sbjct: 409 TLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGN 468
Query: 379 GLSA 382
GL A
Sbjct: 469 GLKA 472
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 128/240 (53%), Gaps = 3/240 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN I+ G+ K K +EM + + + +++I +D C+ A K+++EM+
Sbjct: 267 YNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQ 326
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
++G++ +VV YN++I + + +D A+ + +M MG +P+VVT N +I C+ ++
Sbjct: 327 RQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLK 386
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLF---DRMIESGIRPKMDTYVMLL 321
EA +L ++ K+G P+VIT++ K + F M+++G+ P + TY L+
Sbjct: 387 EAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
F R G ++ + K+ME G D YN LVDAL KG A + +EMF GL+
Sbjct: 447 VGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLN 506
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 164/355 (46%), Gaps = 17/355 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKD---NPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T++ VI+ L K +F + +++ MK +PS I T+ + Y A + +A
Sbjct: 231 TFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVI----TYNTIIDGYCKAGKMFKADAL 286
Query: 90 FNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
++ + +E+++ L+D C ++V A+++ F E + G V YN +
Sbjct: 287 LKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKV-FEEMQRQGLQPNVV-----TYNSL 340
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G + ++M G+ ++ +Y+ ++ CK +A ++ ++ K+G+
Sbjct: 341 INGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGL 400
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+V+ +NT+I A G + +D A + M + G P+V T N +I C G V+EA
Sbjct: 401 APNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARK 460
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ EM G D++TY+ L K R+ + L D M E G+ P TY L+ +
Sbjct: 461 LAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYF 520
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
R G V ME+ G + YN L+ +KG L+ A + EM KGL
Sbjct: 521 REGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGL 575
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 162/349 (46%), Gaps = 23/349 (6%)
Query: 27 FTHTTDTYNSVID---ILGKFFEFD--LSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAH 81
F+ + TYN++ID GK F+ D L + R+ PN TF I+ +
Sbjct: 260 FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIH------PNEITFNILIDGFCRDE 313
Query: 82 LVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN 140
V A F ++ GL+ + V+Y +L++ LC + EA L ++K SG+
Sbjct: 314 NVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGL---QDK---MSGMGLKP 367
Query: 141 KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
YN ++ G+ K + RE +++ KRG+ ++ +++ +D K+G+ A L
Sbjct: 368 NVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLR 427
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
M G+ +V YN +I V A ++ +EM G + +VT N ++ LC+
Sbjct: 428 SMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKK 487
Query: 261 GRVREAYAVLAEMPKKGCVPDVITYHC----FFRCLEKPREILGLFDRMIESGIRPKMDT 316
G R+A +L EM + G P +TY+ +FR L + M + G R + T
Sbjct: 488 GETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFR-EGNSTAALNVRTLMEKKGRRANIVT 546
Query: 317 YVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
Y +L++ F G L + +M E G P+ Y+ L D +++KG +
Sbjct: 547 YNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFI 595
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 124/239 (51%), Gaps = 3/239 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y ++L K S + + + +EM +G D+ +Y++ ++ +C+ G+ A++ K +
Sbjct: 204 YTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLP 263
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
G + + V+YN V++ + +E + A ++ EM GC P+VVT N +I LC G V
Sbjct: 264 SYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVE 323
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
A VL +MP+ GC P+ ++Y+ K ++I + + M+ G P + +Y LL
Sbjct: 324 PAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLL 383
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
R G + + ++++ GCSP +YN ++D L G A + +EM +KGL
Sbjct: 384 TALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGL 442
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 119/239 (49%), Gaps = 6/239 (2%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+YN ++ G+ R +M V D ++Y+ + +C G+ A+ + ++M
Sbjct: 136 VYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAVLEDM 192
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
++G DVV Y ++ A G AM++ EM + GC P +VT N V+ +C+ GRV
Sbjct: 193 FRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRV 252
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVML 320
+A L +P GC P+ ++Y+ + L E+ + L + M G P + T+ ML
Sbjct: 253 EDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNML 312
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ R G + P V ++M + GC+P+ +YN L+ A + + A ++ E M ++G
Sbjct: 313 ISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRG 371
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 158/336 (47%), Gaps = 12/336 (3%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQE 122
+P+ T+ I+ + +AM +++ + G D V+Y +++ +C+ V +A E
Sbjct: 198 LPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAME 257
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
KN+ G E N T YN++L+G F W + EEM +G ++ ++++
Sbjct: 258 FL----KNLPSYG-CEPN-TVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNM 311
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ +C+ G A+++ ++M + G + ++YN ++ A + + AM M G
Sbjct: 312 LISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRG 371
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REIL 299
C P +V+ NT++ LC NG V A +L ++ KGC P +I+Y+ L K +E L
Sbjct: 372 CYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEAL 431
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
L D M G++P + TY + R + + K++++G P YNA++ L
Sbjct: 432 ELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGL 491
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+ A M + G P E T LV+G
Sbjct: 492 CKRRETHNAIDLFAYMISSG--CMPNESTYTILVEG 525
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 119/243 (48%), Gaps = 9/243 (3%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++RG E+M +RG + D+ +Y+I ++ CK +A+KL EM
Sbjct: 169 YNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMH 228
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
KG D+V YN V+ + V+ AM + + GC+P+ V+ N V+K L R
Sbjct: 229 DKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWE 288
Query: 265 EAYAVLAEMPKKGCVPDVITYHCF--FRC----LEKPREILGLFDRMIESGIRPKMDTYV 318
+A ++ EM KGC P+V+T++ F C +E E+L ++M + G P +Y
Sbjct: 289 DAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVL---EQMPQYGCTPNSLSYN 345
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
LL F + + + M GC PD +YN L+ AL G +D+A + ++ K
Sbjct: 346 PLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDK 405
Query: 379 GLS 381
G S
Sbjct: 406 GCS 408
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 111/248 (44%), Gaps = 8/248 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N +I L + + + ++ +M PN ++ + + +++AM
Sbjct: 308 TFNMLISFLCRRGLVEPAMEVLEQMPQY-GCTPNSLSYNPLLHAFCKQKKIHKAMEFVEL 366
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G D VSY L+ ALC V A EL + K+ G S ++ YN ++ G
Sbjct: 367 MVSRGCYPDIVSYNTLLTALCRNGEVDVAIEL-LHQLKDKGCSPVL-----ISYNTVIDG 420
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + E +EM +G+ D+ +YS +C+ + +AV+ + +++ GI+
Sbjct: 421 LTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPT 480
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
YN ++ + A+ ++ M GC P+ T +++ L G V+EA + A
Sbjct: 481 AALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFA 540
Query: 272 EMPKKGCV 279
++ +G V
Sbjct: 541 QLCSRGVV 548
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 68/170 (40%), Gaps = 35/170 (20%)
Query: 245 PSVVTC--------------------------------NTVIKLLCENGRVREAYAVLAE 272
P V+ NT+I+ LC GR A AVL +
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLED 191
Query: 273 MPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M ++GC+PDV+TY K ++ + L D M + G P + TY ++L + G
Sbjct: 192 MFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGR 251
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ K + GC P+ +YN ++ L + A K EEM KG
Sbjct: 252 VEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKG 301
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 57/140 (40%), Gaps = 17/140 (12%)
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREIL 299
+V C +IK LC +GR +A VLA PDV+ Y +C L+ R ++
Sbjct: 103 AVGPCAALIKKLCASGRTADARRVLA-----ASGPDVMVYNAMVAGYCGAGQLDAARRLV 157
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ + P TY L+R G V + M GC PD Y L++A
Sbjct: 158 A------DMPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEAT 211
Query: 360 IDKGMLDMARKYDEEMFAKG 379
+ A K +EM KG
Sbjct: 212 CKRSGYKQAMKLLDEMHDKG 231
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 157/320 (49%), Gaps = 19/320 (5%)
Query: 52 NLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDA 110
+L++ M +N S P+H F I+F Y +++EAM FNK+ + GL D V++ L+DA
Sbjct: 364 DLLNLMVENGLS-PDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDA 422
Query: 111 LCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDK 170
LC+ V +A L F + N G + ++N ++ G + W K +EF+ EM
Sbjct: 423 LCKLGRVDDAV-LKFNQMMNEGVAP-----NIFVFNSLVYGLCTVDKWEKAKEFYFEMLN 476
Query: 171 RGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF 230
+G+ D+ ++ + +C G+ KA +L M++ G + DV++Y T+I + +D
Sbjct: 477 QGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDE 536
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR 290
A + M +G +P T NT++ C GR+ +AY V EM + G P V+TY
Sbjct: 537 AAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILH 596
Query: 291 CLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
L R E L+ MI SG + + Y ++L + + F +++ + CS
Sbjct: 597 GLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSL----CSK 652
Query: 348 D----EFAYNALVDALIDKG 363
D +N ++ AL G
Sbjct: 653 DFQLEITTFNIMIGALFKSG 672
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 141/321 (43%), Gaps = 8/321 (2%)
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTF-NKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL 123
N+ + K A + EAM ++ E G D VSY L+ C K EA EL
Sbjct: 128 NNIVINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALEL 187
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ G S + Y ++ G+F K + EM RG+ ++ +Y+
Sbjct: 188 LHMMADSQGRSCPPNVVS---YATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTV 244
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D +CK+ +A ++++M KG+K D YN +I +R+ EM G
Sbjct: 245 IDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGL 304
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILG 300
+P T +++ LC NGR REA M +KG P+V Y E+
Sbjct: 305 KPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHD 364
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L + M+E+G+ P + ++ + + + ++ KM++ G SPD + AL+DAL
Sbjct: 365 LLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALC 424
Query: 361 DKGMLDMARKYDEEMFAKGLS 381
G +D A +M +G++
Sbjct: 425 KLGRVDDAVLKFNQMMNEGVA 445
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 165/390 (42%), Gaps = 55/390 (14%)
Query: 50 SWNLIHRMKDNP--SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCN 106
+ L+H M D+ S PN ++ + + T V++A F ++ + G++ + V+Y
Sbjct: 184 ALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTT 243
Query: 107 LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE 166
++D LC+ V++ E F + + G+ N T YN ++ G+ + W + E
Sbjct: 244 VIDGLCK-AQVVDRAEGVFQQMID---KGVKPDNDT--YNCLIHGYLSIGKWKEVVRMLE 297
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY----------- 215
EM G+ D ++Y ++ +C +G+ +A + M +KGIK +V Y
Sbjct: 298 EMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKG 357
Query: 216 ------------------------NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
N + A +D AM ++ +M++ G P VV
Sbjct: 358 ALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFG 417
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL------EKPREILGLFDRM 305
+I LC+ GRV +A +M +G P++ ++ L EK +E + M
Sbjct: 418 ALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKE---FYFEM 474
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
+ GIRP + + +L G + + ME +G PD +Y L+ G +
Sbjct: 475 LNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRI 534
Query: 366 DMARKYDEEMFAKGLSAKPREELGTKLVQG 395
D A K + M + GL KP E L+ G
Sbjct: 535 DEAAKSLDVMLSVGL--KPDEWTYNTLLHG 562
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 163/383 (42%), Gaps = 20/383 (5%)
Query: 14 ALEFFNWVETDCH------FTHTTDTYNSVIDILGKFFEFDLSWNLIHRM--KDNPSSIP 65
AL+ F+ + T F H + V E +L +L +RM + P
Sbjct: 33 ALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVTP 92
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ I+ + + TF + + G + + + L+ LC+ K + EA ++
Sbjct: 93 DLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDIL 152
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM---DKRGVVKDLHSYS 181
+G + V YN +L+G+ + E M R ++ SY+
Sbjct: 153 IKRMPELGCTPDVVS-----YNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYA 207
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
++ G+ KA L+ EM +GI+ +VV Y TVI + ++ VD A V+++M +
Sbjct: 208 TVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDK 267
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREI 298
G +P T N +I G+ +E +L EM G PD TY L + RE
Sbjct: 268 GVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREA 327
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
FD MI GI+P + Y +L+ + G L + + M E G SPD +N + A
Sbjct: 328 RFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTA 387
Query: 359 LIDKGMLDMARKYDEEMFAKGLS 381
K M+D A +M +GLS
Sbjct: 388 YAKKAMIDEAMHIFNKMKQQGLS 410
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 109/216 (50%), Gaps = 9/216 (4%)
Query: 187 MCKSGKPWKAVK-LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM---G 242
+C + + +A+ L K M + G DVV+YNT+++ + + A+ + M +
Sbjct: 139 LCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRS 198
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---L 299
C P+VV+ TVI G+V +AY + EM +G P+V+TY L K + +
Sbjct: 199 CPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAE 258
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
G+F +MI+ G++P DTY L+ + G + V + ++M G PD + Y +L++ L
Sbjct: 259 GVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYL 318
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+ G AR + + M KG+ KP + L+ G
Sbjct: 319 CNNGRCREARFFFDSMIRKGI--KPNVAIYGILIHG 352
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 133/319 (41%), Gaps = 41/319 (12%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ F + T V +A + ++ G + D +SY L+ C + EA
Sbjct: 481 PDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEA--- 537
Query: 124 CFGENKNVGFS-GLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
++ +V S GL T YN +L G+ + + EM + G+ + +YS
Sbjct: 538 --AKSLDVMLSVGLKPDEWT--YNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYST 593
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ + + + +A +LY M G + ++ YN ++ + + VD A ++++ +
Sbjct: 594 ILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKD 653
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLF 302
Q + T N +I L ++GR +A + A + G VPDV TY CL +
Sbjct: 654 FQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTY-----CL--------IA 700
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
+ +IE G + D ++ ME+ G +P+ NALV L+ +
Sbjct: 701 ENLIEEGYLEEFDD-------------------LFSAMEKSGTTPNSRMLNALVRRLLHR 741
Query: 363 GMLDMARKYDEEMFAKGLS 381
G + A Y ++ K S
Sbjct: 742 GDITRAGAYLSKLDEKNFS 760
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 155/302 (51%), Gaps = 11/302 (3%)
Query: 83 VNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
+N+A+ T +++ FGL+ + +++ +L+D C+ K + +A+E K + G+ +
Sbjct: 402 MNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWV----KKMAEKGVTPSVE 457
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
T YN ++ G+ K+ + +C + E+M++ GV ++ SY ++ +CK GK +A + +
Sbjct: 458 T--YNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLR 515
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
+M +G+ + YN +I + V A+R + EM P++VT N +I LC+ G
Sbjct: 516 DMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKG 575
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYV 318
++ EA L ++ G PDVITY+ + LGL++ M GI+P + TY
Sbjct: 576 KLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYH 635
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
L+ + G + V ++ +M ++ PD YNA++ + G A + M +
Sbjct: 636 PLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQ 694
Query: 379 GL 380
G+
Sbjct: 695 GI 696
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 175/369 (47%), Gaps = 17/369 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+NS++ L K + + +L+ M+ N +P+ T+ I+F + N AM + +
Sbjct: 283 TFNSLLSGLCKMRKMKEARSLLKEMEVN-GFMPDGYTYSILFDGLLRCDDGNGAMELYEQ 341
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC--FGENKNVGFSGLVEMNKTKIYNMIL 149
E G++ + + L++ LC+ V +A+E+ F EN GLV IYN +
Sbjct: 342 ATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTEN------GLVA--DEVIYNTFV 393
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G+ ++ K E M+ G+ + +++ +D C + KA + K+M +KG+
Sbjct: 394 NGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVT 453
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
V YNT+I G D ++ +M E+G +P+VV+ ++I LC++G++ EA V
Sbjct: 454 PSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIV 513
Query: 270 LAEMPKKGCVPDVITYHCFF--RCL-EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
L +M +G +P+ Y+ C+ K ++ L FD M+ S I P + TY +L+ +
Sbjct: 514 LRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCK 573
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPRE 386
G L ++ G SPD YN+L+ + G + E M K L KP
Sbjct: 574 KGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETM--KNLGIKPTV 631
Query: 387 ELGTKLVQG 395
L+ G
Sbjct: 632 RTYHPLISG 640
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 174/419 (41%), Gaps = 58/419 (13%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C D +A+ +E+ + T+NS+ID E D + + +M + + P
Sbjct: 397 CRIGDMNKAILTIERMES-FGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVT-P 454
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQ--- 121
+ T+ + Y + +++E G+K + VSY +L++ LC+ ++EA+
Sbjct: 455 SVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVL 514
Query: 122 --ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
+C G N ++YNM++ G + F++EM + + L +
Sbjct: 515 RDMICRGVLPN-----------AQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVT 563
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI-------------------R 220
Y++ +D +CK GK +A ++ G DV+ YN++I +
Sbjct: 564 YNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMK 623
Query: 221 AVGVS---------------EGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+G+ EG++ ++Y EM +M P V N +I E G ++
Sbjct: 624 NLGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQK 683
Query: 266 AYAVLAEMPKKGCVPDVITYHCF----FRCLEKPREILGLFDRMIESGIRPKMDTYVMLL 321
AY++ M +G PD +TY+ FR K I L + M + PK DTY +L+
Sbjct: 684 AYSLHQGMLDQGIHPDKMTYNSLILGHFR-EGKLSNIKDLVNNMKAKELAPKADTYDILV 742
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ +V +++M E P+ N L L +G L + EM KG+
Sbjct: 743 KGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKGI 801
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 121/260 (46%), Gaps = 10/260 (3%)
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F E +N GF T +Y ++ K+ EF + M KRGV ++ Y++ +
Sbjct: 164 FMEIENSGFR-----TDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLI 218
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+C+ + A K++ EM + +V YNT+I +D A ++ M+E
Sbjct: 219 GGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVA 278
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF----RCLEKPREILG 300
P+++T N+++ LC+ +++EA ++L EM G +PD TY F RC + +
Sbjct: 279 PNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRC-DDGNGAME 337
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L+++ E GIR T +LL + G + + KK E G DE YN V+
Sbjct: 338 LYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYC 397
Query: 361 DKGMLDMARKYDEEMFAKGL 380
G ++ A E M + GL
Sbjct: 398 RIGDMNKAILTIERMESFGL 417
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 3/169 (1%)
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
K V L+ E++ G + D Y I+A + + M MR+ G +P+V N +I
Sbjct: 159 KVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLI 218
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLF---DRMIESGIR 311
LC R+R+A + EM V ++TY+ K E+ F +RM E +
Sbjct: 219 GGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVA 278
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
P + T+ LL + ++ + K+ME G PD + Y+ L D L+
Sbjct: 279 PNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLL 327
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 121/280 (43%), Gaps = 18/280 (6%)
Query: 5 SCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
SC K AL FF+ + + T TYN +ID L K + + + + ++ + S
Sbjct: 536 SCMVGKVKDALRFFDEM-MRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHS- 593
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELC 124
P+ T+ + Y A V++ +G + + G+K V + + + C K IE E
Sbjct: 594 PDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCS-KEGIELVEKL 652
Query: 125 FGENKNVGFSGLVEMNKTK---IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
+ E +++MN +YN ++ + ++ K + M +G+ D +Y+
Sbjct: 653 YNE--------MLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYN 704
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRV--YREMR 239
+ + GK L MK K + Y+ +++ G + DF+ YREM
Sbjct: 705 SLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVK--GHCDLKDFSGAYVWYREMV 762
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
E P+ CN + L + GR++E + +EM KG +
Sbjct: 763 ENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKGII 802
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 171/395 (43%), Gaps = 18/395 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A RALE + + T YN+VI ++ M++ P
Sbjct: 127 CTAGKPVRALELLRQMPSPNAVT-----YNTVIAGFCARGRVQAGIEIMREMRERGGIAP 181
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL--KDEVSYCNLVDALCEYKHVIEAQEL 123
+ T+ + + V +A F+++ G + V Y L+ C+ + +E
Sbjct: 182 DKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGN-LEVALR 240
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
GE + G S V YN+ + F + EEM ++G+ D +Y+I
Sbjct: 241 YRGEMVDRGVSMTV-----ATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNIL 295
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
++ CK GK KA+K+++ M KGI+ VV Y ++I A+ + V R++ + G
Sbjct: 296 INGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGI 355
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR---CLEKPREILG 300
+P + N +I C G + A+ ++ EM KK PD +TY+ R L + E G
Sbjct: 356 RPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARG 415
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L + M + GI+P + +Y L+ + G ++ V +M G +P YNA++ L
Sbjct: 416 LIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLC 475
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
G A +EM G++ P + L++G
Sbjct: 476 LNGQGGDAEDLVKEMVGNGIT--PDDSTYISLIEG 508
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 190 SGKP-WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
+G+P ++ LY +K + + + + ++ ++ + A ++ ++ + S
Sbjct: 62 AGRPHTTSLSLYSRLKSLSLPIPTASLHPLLSSLPPAP----AFVLFADIFRLRLPLSTT 117
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIE- 307
T N +++ LC G+ A +L +MP P+ +TY+ + + M E
Sbjct: 118 TFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFCARGRVQAGIEIMREM 173
Query: 308 ---SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG-CSPDEFAYNALVDALIDKG 363
GI P TY ++ + + G + V+ +M G P+ YNAL+ D+G
Sbjct: 174 RERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQG 233
Query: 364 MLDMARKYDEEMFAKGLS 381
L++A +Y EM +G+S
Sbjct: 234 NLEVALRYRGEMVDRGVS 251
>gi|125541207|gb|EAY87602.1| hypothetical protein OsI_09013 [Oryza sativa Indica Group]
Length = 555
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 172/383 (44%), Gaps = 20/383 (5%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILG----KFFEFDLSWNLIHRMKDNPS-SI 64
D K A FF W + H TYN VIDIL K +F + +++ MK + S+
Sbjct: 125 DEKLAFRFFVWASHQGGYEHEAATYNDVIDILSGTRYKARQFGVLCDVLDHMKRRRTRSV 184
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQEL 123
P I+ + Y HL + + E N L+DA C+ V EA+ +
Sbjct: 185 PVDDLLGIL-RAYTEKHLTHLRKLAKKRRVRMRTPPETDALNVLLDAFCKSGMVREAEAV 243
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ + + + Y+++ GW + + + EEM + + +Y+
Sbjct: 244 FSRVKRKL-------LGNAETYSILFFGWCRARDPKRAMKVLEEMIQMKHTPENFTYNAA 296
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMD---VVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+D C +G +A L++ M+ +G + Y+ +I A+ + ++ + EMR+
Sbjct: 297 IDSFCSAGLVSEARDLFEFMRTEGSTISSPTAKTYSIMIAALAKAGQMEECFELISEMRK 356
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC---LEKPRE 297
GC P V T +I+ + ++ AY VL EM K G PD++TY+CF + L+K +
Sbjct: 357 CGCMPDVSTYKDLIEGMLLVDKLDAAYCVLDEMAKAGFPPDIVTYNCFLKVLCGLQKADD 416
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
L L +RMIE+ P + TY ML+ F +W +M++ GC Y ++D
Sbjct: 417 ALELCERMIEAHCEPSVHTYNMLMVMFFEMREPDRAINIWIEMDKRGCHRAVDTYETMID 476
Query: 358 ALIDKGMLDMARKYDEEMFAKGL 380
L D G + A +E+ +G+
Sbjct: 477 GLFDSGRTEDATTLLDEVINRGM 499
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 128/307 (41%), Gaps = 12/307 (3%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
TD N ++D K + + R+K + N T+ I+F + A AM
Sbjct: 221 TDALNVLLDAFCKSGMVREAEAVFSRVKRK--LLGNAETYSILFFGWCRARDPKRAMKVL 278
Query: 91 NKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
++ + E +Y +D+ C V EA++L F + G + + K Y++++
Sbjct: 279 EEMIQMKHTPENFTYNAAIDSFCSAGLVSEARDL-FEFMRTEGST--ISSPTAKTYSIMI 335
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
K +C E EM K G + D+ +Y ++ M K A + EM K G
Sbjct: 336 AALAKAGQMEECFELISEMRKCGCMPDVSTYKDLIEGMLLVDKLDAAYCVLDEMAKAGFP 395
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
D+V YN ++ + + D A+ + M E C+PSV T N ++ + E A +
Sbjct: 396 PDIVTYNCFLKVLCGLQKADDALELCERMIEAHCEPSVHTYNMLMVMFFEMREPDRAINI 455
Query: 270 LAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIR---PKMDTYVMLLRK 323
EM K+GC V TY L + + L D +I G++ K D ++ L
Sbjct: 456 WIEMDKRGCHRAVDTYETMIDGLFDSGRTEDATTLLDEVINRGMKLSYKKFDAIMLRLSA 515
Query: 324 FGRWGFL 330
G G +
Sbjct: 516 VGNLGAI 522
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 106/240 (44%), Gaps = 16/240 (6%)
Query: 6 CYANDWKRALEFFNWVETDCHF--THTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
C A A + F ++ T+ + T TY+ +I L K + + + LI M+
Sbjct: 301 CSAGLVSEARDLFEFMRTEGSTISSPTAKTYSIMIAALAKAGQMEECFELISEMR-KCGC 359
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+P+ +T++ + + + ++ A +++ + G D V+Y + LC + +A E
Sbjct: 360 MPDVSTYKDLIEGMLLVDKLDAAYCVLDEMAKAGFPPDIVTYNCFLKVLCGLQKADDALE 419
Query: 123 LCFGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
LC ++E + YNM++ +F+M + W EMDKRG + + +
Sbjct: 420 LC---------ERMIEAHCEPSVHTYNMLMVMFFEMREPDRAINIWIEMDKRGCHRAVDT 470
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y +D + SG+ A L E+ +G+K+ ++ ++ + + R+ MR
Sbjct: 471 YETMIDGLFDSGRTEDATTLLDEVINRGMKLSYKKFDAIMLRLSAVGNLGAIHRLSEHMR 530
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 172/395 (43%), Gaps = 25/395 (6%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D K AL+FF W + F HTT++Y ++ ++ + + + + + + N
Sbjct: 142 DPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFPV 201
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENK 129
I + T ++ G F+ L E + EA E CF +
Sbjct: 202 CNIFDMLWSTRNICVSGSGVFDVL--------------FSVFVELGLLEEANE-CFSRMR 246
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
N + K + N +L K R+F+ +M G+ + +Y++ +D +CK
Sbjct: 247 N-----FRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCK 301
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
G + +L+ +M++ G+ DVV YN++I G ++ ++ EM+++GC P ++T
Sbjct: 302 EGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIIT 361
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMI 306
N +I C+ ++ A+ +EM G P+V+TY K + G LF M
Sbjct: 362 YNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMR 421
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
+G+ P TY L+ + G L + + M + G + Y AL+D L G +
Sbjct: 422 RTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMI 481
Query: 367 MARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
A + M G+S P +++ T LV G + E+
Sbjct: 482 EAEEVFRSMLKDGIS--PNQQVYTALVHGYIKAER 514
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 170/370 (45%), Gaps = 15/370 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS+ID GK + +L + MKD +P+ T+ + Y + A F++
Sbjct: 326 TYNSLIDGYGKVGSLEEVASLFNEMKD-VGCVPDIITYNGLINCYCKFEKMPRAFEYFSE 384
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ GLK + V+Y L+DA C+ + A +L F + + G + Y ++
Sbjct: 385 MKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKL-FVDMRRTGL-----LPNEFTYTSLIDA 438
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + + +M + GV ++ +Y+ +D +CK+G+ +A ++++ M K GI +
Sbjct: 439 NCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPN 498
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
Y ++ +E ++ AM++ ++M E +P ++ ++I C ++ E +L
Sbjct: 499 QQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILE 558
Query: 272 EMPKKGC----VPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
EM +G V +F+ K + L F M + G+ + TY +L+ +
Sbjct: 559 EMKSRGISANPVISTTIIDAYFKA-GKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKA 617
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREE 387
G + + +M LG P+ Y +L+D L ++ A+K +EM +G++ P
Sbjct: 618 GIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMT--PDIT 675
Query: 388 LGTKLVQGGL 397
T L+ G L
Sbjct: 676 AFTALIDGNL 685
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 172/418 (41%), Gaps = 49/418 (11%)
Query: 4 LSCYANDWK--RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
++CY K RA E+F+ ++ + TY+++ID K + L M+
Sbjct: 366 INCYCKFEKMPRAFEYFSEMKNN-GLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMR-RT 423
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA 120
+PN T+ + A + EA N + + G+K + V+Y L+D LC+ +IEA
Sbjct: 424 GLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEA 483
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMS------------------------ 156
+E+ F G S ++Y ++ G+ K
Sbjct: 484 EEV-FRSMLKDGISP-----NQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILY 537
Query: 157 ---WWGKCRE--------FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
WG C + EEM RG+ + + +D K+GK A+ ++EM+
Sbjct: 538 GSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQD 597
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G++ +V Y +I + + V+ A+ + M +G QP+V ++I LC+N +
Sbjct: 598 VGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIES 657
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLR 322
A + EM +G PD+ + K +E L L RM E I + Y L+
Sbjct: 658 AKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVS 717
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
F + G L + +M E G P+E L+ +G LD A + EM GL
Sbjct: 718 GFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGL 775
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 77 YVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQE-----LCFGENKN 130
Y A ++A+ F ++ + G++ V+YC L+D LC+ V A + L G N
Sbjct: 579 YFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPN 638
Query: 131 VGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS 190
V +Y ++ G K + ++ ++EM RG+ D+ +++ +D K
Sbjct: 639 VA-----------VYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKH 687
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTC 250
G +A+ L M + I+ D+ Y +++ + A + + EM E G P V C
Sbjct: 688 GNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLC 747
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
+++ + G++ EA + EM + G + + T
Sbjct: 748 ICLLREYYKRGQLDEAIELKNEMERMGLITESAT 781
>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
Length = 431
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 158/326 (48%), Gaps = 10/326 (3%)
Query: 59 DNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHV 117
D S PN T++ + + V A V AM +K+ + GL+ D + Y ++D L + +
Sbjct: 41 DKHGSKPNAYTYKCVIQSLVKAGNVVLAMDFLDKMIKTGLEPDTLLYNVVLDGLGKANMI 100
Query: 118 IEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
EA +L F K++G Y +++R + + ++EM++RG
Sbjct: 101 DEACKL-FASMKSMGCPA-----DDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSA 154
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
+Y+ +DI CK+G+ A+ + K+M K + D N++I AV + + A ++
Sbjct: 155 PAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFER 214
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR- 296
M++ G + V+ N ++ + G+V AY + EM +G P+ IT++ CL + +
Sbjct: 215 MKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKY 274
Query: 297 --EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
E + M +G+ P + TY ++ F + G + F ++ ME+ GCS + YN
Sbjct: 275 ASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNL 334
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGL 380
L+DAL+ G AR +M KG+
Sbjct: 335 LIDALVKAGRYQDARDIYFDMKKKGI 360
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 3/240 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y +++ K +F ++M K G+ D Y++ +D + K+ +A KL+ MK
Sbjct: 52 YKCVIQSLVKAGNVVLAMDFLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMK 111
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
G D Y +IR++G + + A ++ EM E GC PS VI + C+ GR+
Sbjct: 112 SMGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIE 171
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKP-REILG--LFDRMIESGIRPKMDTYVMLL 321
A VL +M K PD T + + + R L +F+RM +SG+ ++ +L
Sbjct: 172 SAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAML 231
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G+ G + + +ME G P+ +N L++ L A K +EM + GL+
Sbjct: 232 DCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLT 291
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 135/300 (45%), Gaps = 17/300 (5%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN V+D LGK D + L MK ++ T+ I+ + EA F+++
Sbjct: 87 YNVVLDGLGKANMIDEACKLFASMKSMGCPADDY-TYAILIRSLGRCKRDEEATLLFDEM 145
Query: 94 DEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK---IYNMIL 149
+E G +Y N++D C+ + E+ V +++ N N ++
Sbjct: 146 EERGCTPSAPAYTNVIDIYCKAGRI---------ESAMVVLKKMLDKNLAPDDYTLNSLI 196
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
+ E +E M K GV + S++ +D K+GK A + EM+ +GIK
Sbjct: 197 TAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIK 256
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
+ + +NT+I +G ++ A +V +EMR G P V T +I+ + G + +A+ +
Sbjct: 257 PNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEM 316
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
+M K GC +V+TY+ L K ++ ++ M + GI P T +L + G+
Sbjct: 317 FGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVLQQLAGK 376
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 121/247 (48%), Gaps = 11/247 (4%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+ N ++ + + S K + ++E+DK G + ++Y + + K+G A+ +M
Sbjct: 16 VSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMDFLDKM 75
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
K G++ D + YN V+ +G + +D A +++ M+ MGC T +I+ L R
Sbjct: 76 IKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRD 135
Query: 264 REAYAVLAEMPKKGCVP------DVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTY 317
EA + EM ++GC P +VI +C +E +L +M++ + P T
Sbjct: 136 EEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVL---KKMLDKNLAPDDYTL 192
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
L+ R G ++++M++ G + + ++NA++D G + +A ++ +EM A
Sbjct: 193 NSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEA 252
Query: 378 KGLSAKP 384
+G+ KP
Sbjct: 253 RGI--KP 257
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 129/244 (52%), Gaps = 9/244 (3%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+++++ G K+ + K + E+M G + +Y+ +D CK+GK +KA L KEM
Sbjct: 232 FDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMV 291
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K I + + +N +I E V A +V+ EM+ G QP+VVT N++I LC NG++
Sbjct: 292 AKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLD 351
Query: 265 EAYAVLAEMPKKGCVPDVITYH------CFFRCLEKPREILGLFDRMIESGIRPKMDTYV 318
EA + +M G P+V+TY+ C + L++ RE+L D + + G+ P + T+
Sbjct: 352 EALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREML---DDIGKRGLAPNVITFN 408
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
L+ +G+ G + F++ M + G P+ YN L+ +G + ARK +EM
Sbjct: 409 TLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGN 468
Query: 379 GLSA 382
GL A
Sbjct: 469 GLKA 472
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 124/234 (52%), Gaps = 3/234 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN I+ G+ K K +EM + + + +++I +D C+ A K+++EM+
Sbjct: 267 YNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQ 326
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
++G++ +VV YN++I + + +D A+ + +M MG +P+VVT N +I C+ ++
Sbjct: 327 RQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLK 386
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLF---DRMIESGIRPKMDTYVMLL 321
EA +L ++ K+G P+VIT++ K + F M+++G+ P + TY L+
Sbjct: 387 EAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
F R G ++ + K+ME G D YN LVDAL KG A + +EM
Sbjct: 447 VGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEM 500
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 161/343 (46%), Gaps = 20/343 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKD---NPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T++ VI+ L K +F + +++ MK +PS I T+ + Y A + +A
Sbjct: 231 TFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVI----TYNTIIDGYCKAGKMFKADAL 286
Query: 90 FNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
++ + +E+++ L+D C ++V A+++ F E + G V YN +
Sbjct: 287 LKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKV-FEEMQRQGLQPNVV-----TYNSL 340
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G + ++M G+ ++ +Y+ ++ CK +A ++ ++ K+G+
Sbjct: 341 INGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGL 400
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+V+ +NT+I A G + +D A + M + G P+V T N +I C G V+EA
Sbjct: 401 APNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARK 460
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMI---ESGIRPKMDTYVMLLR 322
+ EM G D++TY+ L K R+ + L D M + G R + TY +L++
Sbjct: 461 LAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIK 520
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
F G L + +M E G P+ Y+ L D +++KG +
Sbjct: 521 GFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFI 563
>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 168/359 (46%), Gaps = 18/359 (5%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T Y +++ I K + + + NL+H M+ +P T+ + + + V +A G
Sbjct: 265 TAKIYTTLMGIYFKLGKVEEALNLVHEMRMR-RCVPTVYTYTELIRGLGKSGRVEDAYGV 323
Query: 90 FNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK---IY 145
+ + + G K D V NL++ L + EA EL F + +N T Y
Sbjct: 324 YKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVEL---------FEEMRLLNCTPNVVTY 374
Query: 146 NMILRGWFKMSWWGKCREFW-EEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
N I++ F+ W E M K GVV +YSI +D CK+ + KA+ L +EM
Sbjct: 375 NTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMD 434
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+KG AY ++I ++G ++ + A +++E++E SV +IK + GR
Sbjct: 435 EKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFN 494
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLL 321
EA + EM K GC+PDV Y+ + + E LF M E+G P ++++ ++L
Sbjct: 495 EAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIIL 554
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
R G + ++ KM+ PD +YN ++ L G+ + A K +EM +KG
Sbjct: 555 NGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGF 613
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 162/350 (46%), Gaps = 11/350 (3%)
Query: 15 LEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
++FF W +F H + TY ++I L + W I M +P +I I+
Sbjct: 109 IQFFKWAGKKRNFEHDSTTYMALIRCLDENRLVGELWRTIQDMVKSPCAIGPSELSEIV- 167
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGF 133
K +VN+A+ F ++ + +Y +++ L + H + EL + E + G
Sbjct: 168 KILGRVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHEL-YNEMCSEGH 226
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
T Y+ ++ + K++ ++EM + G+ Y+ M I K GK
Sbjct: 227 C----FPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKV 282
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
+A+ L EM+ + V Y +IR +G S V+ A VY+ M + GC+P VV N +
Sbjct: 283 EEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNL 342
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL----EKPREILGLFDRMIESG 309
I +L + R++EA + EM C P+V+TY+ + L P E +RM + G
Sbjct: 343 INILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDG 402
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ P TY +L+ F + + ++ ++M+E G P AY +L+++L
Sbjct: 403 VVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSL 452
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 142/297 (47%), Gaps = 20/297 (6%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDL------SWNLIHRMKDNP 61
++ K A+E F + + T TYN++I L FE SW + RMK +
Sbjct: 349 SDRLKEAVELFEEMRL-LNCTPNVVTYNTIIKSL---FEDKAPPSEASSW--LERMKKD- 401
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKD-EVSYCNLVDALCEYKHVIEA 120
+P+ T+ I+ + + V +A+ ++DE G +YC+L+++L + K A
Sbjct: 402 GVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAA 461
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
EL +N G S + ++Y ++++ + K + + + EM K G + D+++Y
Sbjct: 462 NELFQELKENCGSSSV------RVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAY 515
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ + M ++ +A L++ M++ G D+ ++N ++ + + G AM ++ +M+
Sbjct: 516 NALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKS 575
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
+P V+ NTV+ L G EA ++ EM KG D+ITY + K E
Sbjct: 576 STIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEAVGKVDE 632
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 102/233 (43%), Gaps = 25/233 (10%)
Query: 157 WWGKCREFWEEMDKRGVVKDLHSYSIYMDIM-CKS-----GKPWKAVKLYKEMKKKGIKM 210
W GK R F H + YM ++ C G+ W+ ++ +M K +
Sbjct: 114 WAGKKRNFE------------HDSTTYMALIRCLDENRLVGELWRTIQ---DMVKSPCAI 158
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
+ +++ +G + V+ A+ ++ +++ C+P+ T N+VI +L + G + + +
Sbjct: 159 GPSELSEIVKILGRVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELY 218
Query: 271 AEMPKKG-CVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
EM +G C PD +TY F L + + LFD M E+G++P Y L+ + +
Sbjct: 219 NEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFK 278
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
G + + +M C P + Y L+ L G ++ A + M G
Sbjct: 279 LGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDG 331
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 166/371 (44%), Gaps = 20/371 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDIL---GKFFEFDLSWNLIHRMKDNPS 62
C A + + A +E D + T+N V+ L GK + + R
Sbjct: 165 CLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRR------ 218
Query: 63 SIP-NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEA 120
S+P + ATF I+ V A ++ +A + G ++ +Y +V+ L + K + EA
Sbjct: 219 SMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEA 278
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
L + + +G T YN +L G KM + + ++ G D+ +Y
Sbjct: 279 VALM----EKITANGCTPTIAT--YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTY 332
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ +D + K + ++A KL+KEM +G+ +D V Y +IR + + + A VY+ M
Sbjct: 333 TSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTS 392
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI-- 298
GC P VVT +T+I L + GR+ A + M +G P+ + Y L K R++
Sbjct: 393 HGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 452
Query: 299 -LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
L + +M ++ P TY +L+ + G + + +M E GC PD + YN L+
Sbjct: 453 ALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILIS 512
Query: 358 ALIDKGMLDMA 368
L G D A
Sbjct: 513 GLCKAGNTDAA 523
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 160/375 (42%), Gaps = 52/375 (13%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI--PNHATFRIMFKRYVTAHLVN 84
F H+ T N+++D+ + + NL +K+ ++I P+ T+ ++ Y A
Sbjct: 115 FQHSVHTGNALLDVFARTKRHREAGNL---LKNELATIFRPDVETWNVLITGYCLAREPE 171
Query: 85 EAMGTFNKLDE-FGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK 143
EA +++E FG+ + K
Sbjct: 172 EAFAVIREMEEDFGVAPSL----------------------------------------K 191
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+N++L G K + +E + +R + ++SI ++ + K+G +A L +E
Sbjct: 192 THNLVLHGLCKSGKVLAAMDHFEAV-RRSMPVSAATFSILINGLVKAGMMIQAHSLAQET 250
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
G +D+ Y ++ + ++ + A+ + ++ GC P++ T N ++ LC+ GR+
Sbjct: 251 TTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRL 310
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVML 320
EA +L ++ GC PDV+TY L K + E LF M G+ Y L
Sbjct: 311 EEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTAL 370
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+R + G + V+K M GC PD + ++D L G + A + + M A+GL
Sbjct: 371 IRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGL 430
Query: 381 SAKPREELGTKLVQG 395
+ P E + + L+ G
Sbjct: 431 A--PNEVVYSALIHG 443
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 160/382 (41%), Gaps = 53/382 (13%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY ++++ L K + + L+ ++ N + P AT+ + + EA+ K
Sbjct: 261 TYTAIVNWLAKNKKIQEAVALMEKITANGCT-PTIATYNALLNGLCKMGRLEEAIDLLRK 319
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + G D V+Y +L+D L + K EA +L F E + G + T Y ++RG
Sbjct: 320 IVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL-FKEMASRGLA-----LDTVCYTALIRG 373
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI--- 208
+ + ++ M G V D+ + S +D + K+G+ AV+++K M+ +G+
Sbjct: 374 LLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPN 433
Query: 209 ---------------KMD-----------------VVAYNTVIRAVGVSEGVDFAMRVYR 236
KMD + YN +I + S V+ A +
Sbjct: 434 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFD 493
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR 296
EM E GC+P V T N +I LC+ G A VL +M V Y L K
Sbjct: 494 EMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFV-----YSSLVDGLCKSG 548
Query: 297 EILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
++ G LF M SG+ T L+ + + ++ + + G P +AYN
Sbjct: 549 KLEGGCMLFHEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYN 606
Query: 354 ALVDALIDKGMLDMARKYDEEM 375
+++ ALI G ++ + +EM
Sbjct: 607 SIISALIKSGKVNEGQAVYQEM 628
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 163/350 (46%), Gaps = 11/350 (3%)
Query: 15 LEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
++FF W +F H TY +I L F W +I M +P+ + A +
Sbjct: 79 IQFFKWAGKRRNFEHDLTTYMPLIRCLDDCGLFGEMWKMIQEMVRSPTCVIGPADLSEVV 138
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNVGF 133
K A +VN+A+ F ++ K S Y +++ L + H + EL + E N G
Sbjct: 139 KILGKAKMVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHEL-YHEMCNEGD 197
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
T Y++++ + K+ ++EM G+ Y+ + I KSG
Sbjct: 198 C----FPDTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGD- 252
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
KA+ L +EMK KG V Y +I+ +G S V+ A V+ M + GC+P VV N +
Sbjct: 253 EKALGLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNL 312
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR----EILGLFDRMIESG 309
I + + GR+ +A + +M C P+V+TY+ + L + + E F++M +G
Sbjct: 313 INIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANG 372
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ P TY +L+ F + + ++ ++M+E G P AY +L++AL
Sbjct: 373 VTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINAL 422
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 164/356 (46%), Gaps = 13/356 (3%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T Y +++ I K + + + L+ MKD + P T+ + K + V +A
Sbjct: 236 TAKIYTTLLAIYFKSGD-EKALGLVQEMKDKGCA-PTVFTYTELIKGLGKSGRVEDAYSV 293
Query: 90 FNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
F + + G K D V NL++ + + +A +L F + +++ + V YN +
Sbjct: 294 FLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKL-FDQMRSLKCAPNV-----VTYNTV 347
Query: 149 LRGWFKMSWWGKCREFW-EEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++ F+ W E+M GV +YSI +D CK+ + KA+ L +EM +KG
Sbjct: 348 IKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKG 407
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
AY ++I A+G ++ + A ++ E++E + S +IK L + GR EA
Sbjct: 408 FPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAV 467
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKF 324
+ EM K GC PDV Y+ L + E M E+G P ++++ ++L
Sbjct: 468 DLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGL 527
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
R G ++ KM++ PD +YN ++ +L GM + A K EM ++G
Sbjct: 528 ARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGF 583
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 126/272 (46%), Gaps = 19/272 (6%)
Query: 33 TYNSVIDILGKFFEFDL------SWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
TYN+VI L FE SW +MK N P+ T+ I+ + + V +A
Sbjct: 343 TYNTVIKAL---FESKAPASEAASW--FEKMKAN-GVTPSSFTYSILIDGFCKTNRVEKA 396
Query: 87 MGTFNKLDEFGLKD-EVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
+ ++DE G +YC+L++AL + K A EL +N G S +IY
Sbjct: 397 LLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSS------ARIY 450
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
++++ K + + + EM K G D+++Y+ M + ++G +A + M++
Sbjct: 451 AVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEE 510
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G D+ ++N ++ + + + A ++ +M++ +P V+ NT++ L +G E
Sbjct: 511 NGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEE 570
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
A ++ EM +G D ITY + K E
Sbjct: 571 AAKLMREMGSRGFEYDHITYSSILEAVGKVDE 602
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 165/373 (44%), Gaps = 23/373 (6%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F T S+ D L F+ ++ NP P+ A F + +
Sbjct: 59 FVSNNSTNISIDDALASFYRM---------VRMNPR--PSVAEFGKFLGSFAKKKQYSTV 107
Query: 87 MGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
+ N++D FG+ V N L++ LC HV A + G+ +G +
Sbjct: 108 VSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSI-LGKMFKLGIHP-----TASTF 161
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N ++ G + E + EM +RG ++ SY+ ++ +CK+G AV ++K+M++
Sbjct: 162 NALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQ 221
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G K DVV YNT+I ++ V+ AM EM + G P+V T N ++ C G++ E
Sbjct: 222 NGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNE 281
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLR 322
A + EM + +PD +T L K E +F+ M E G+ P + TY L+
Sbjct: 282 ATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMD 341
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ + V++ M GC+P +YN L++ +D A+ EM+ K L+
Sbjct: 342 GYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALN- 400
Query: 383 KPREELGTKLVQG 395
P + L+QG
Sbjct: 401 -PDTVTYSTLMQG 412
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 169/357 (47%), Gaps = 17/357 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++ID L K + + + M D PN T+ M + +NEA F +
Sbjct: 230 TYNTIIDSLCKDRLVNDAMEFLSEMLDRGIP-PNVFTYNCMVHGFCILGQLNEATRLFKE 288
Query: 93 L-DEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + D V+ LVD LC+ V EA+ L F G VE N YN ++ G
Sbjct: 289 MVGRDVMPDTVTLTILVDGLCKEGMVSEAR-LVFETMTEKG----VEPN-ISTYNALMDG 342
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + ++ +E M ++G +HSY+I ++ CKS + +A L EM K + D
Sbjct: 343 YCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPD 402
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V Y+T+++ + A+ +++EM G P++VT + ++ C++G + EA +L
Sbjct: 403 TVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLK 462
Query: 272 EMPKKGCVPDVITYHCFFRC------LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
M +K P+++ + LE +E LF ++ GIRP + TY ++++
Sbjct: 463 SMQEKKLEPNIVHHTILIEGMFIAGKLEVAKE---LFSKLFADGIRPTIRTYTVMIKGLL 519
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ G + +++KME+ G P+ +YN ++ + A + +EM K SA
Sbjct: 520 KEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSA 576
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 121/291 (41%), Gaps = 55/291 (18%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
PN +T+ + Y L+NEA F + G V SY L++ C+ + + EA+ L
Sbjct: 331 PNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSL 390
Query: 124 CFGENKNVGFSGLVEM------NKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
L EM T Y+ +++G + + ++EM G++ +L
Sbjct: 391 ------------LAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNL 438
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVS------------ 225
+YSI +D CK G +A+KL K M++K ++ ++V + +I + ++
Sbjct: 439 VTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSK 498
Query: 226 ----------------------EGV-DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
EG+ D A ++R+M + G P+ + N +I+ +N
Sbjct: 499 LFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQD 558
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPK 313
A ++ EM K ++ T+ LE EI+ F R G + K
Sbjct: 559 SSTAIRLIDEMVGKRFSANLSTFQMLLD-LESQDEIISQFMRGSSQGRKMK 608
>gi|224115776|ref|XP_002332054.1| predicted protein [Populus trichocarpa]
gi|222831940|gb|EEE70417.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 177/350 (50%), Gaps = 16/350 (4%)
Query: 40 ILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK 99
+LG +F+ +W LI + + S + IM RY A++ +A+ F +D+F +
Sbjct: 65 VLGNHRKFNTAWILIRDL--HRSLMSTRKAMLIMIDRYAAANVPGKAIYAFRIMDKFRMT 122
Query: 100 -DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSW- 157
DE ++ L++ LC+ ++ EA+E K F L + + +N+IL GW +
Sbjct: 123 PDEEAFYFLLNVLCKNGNIEEAEEFMLVNKK---FFPL----EVEGFNIILNGWCNICVD 175
Query: 158 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
+ + W EM K + D +Y+ + K G + +++LY MKK+G + YN+
Sbjct: 176 VFEAKRIWREMSKYCIDPDATTYTHMISCFSKVGNLFDSLRLYDGMKKRGWVPGIEVYNS 235
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
++ + A+++ +M+E G Q T N++I+ LCE ++ +A +++A M ++
Sbjct: 236 LVYILTRENCFKEALKILDKMKETGLQRDSATYNSMIRPLCEAKKLEDARSLMAAMIEEN 295
Query: 278 CVPDVITYHCFFR--CLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFV 335
P + TYH F + E+ E+L DRM +G+ P DT+++LL KF +
Sbjct: 296 VSPTIETYHAFLQGIVFEETFEVL---DRMKIAGLGPTEDTFLLLLAKFFKLEQPENALK 352
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
+W +M++ + + Y +V+ L G+L AR+Y EM + G S P+
Sbjct: 353 IWVEMKQYEVASNLTHYTVMVEGLARCGLLTKAREYYAEMRSNGYSDDPK 402
>gi|255540881|ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550620|gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 876
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 175/397 (44%), Gaps = 53/397 (13%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSIPNHA 68
D AL FF W++ F H TY +++ ILG+ +F L+ +M KD PN
Sbjct: 359 DHTVALNFFYWLKRQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDG--CQPNVV 416
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE 127
T+ + Y A+ +N+A+ FN++ G + D V+YC L+D I A+
Sbjct: 417 TYNRLIHSYGRANYLNDAVDVFNEMQRVGCEPDRVTYCTLID--------IHAK------ 462
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
+G ++ F + E ++ M G+ D +YS+ ++ +
Sbjct: 463 ------AGFLD--------------FAL-------EMYQRMQAAGLSPDTFTYSVIINCL 495
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
K+G A KL+ EM ++G ++V YN +I + A+++YR+M+ G QP
Sbjct: 496 GKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDK 555
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGL---FDR 304
VT + V+++L G + EA AV +EM +K VPD Y K + +
Sbjct: 556 VTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQT 615
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID-KG 363
M+ +G+RP + T LL F R L + + + M ELG +P Y L+ + +
Sbjct: 616 MLNTGLRPNVPTCNSLLSAFLRVHKLADAYNLLQSMLELGLNPSLQTYTLLLSCCTEARS 675
Query: 364 MLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGE 400
DM Y E M G P L G DG+
Sbjct: 676 PYDMG-IYCELMAVTG---HPAHMFLLSLPSAGPDGQ 708
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 123/239 (51%), Gaps = 3/239 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y ++L K S + + + +EM +G D+ +Y++ ++ +C+ G+ A++ K +
Sbjct: 196 YTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLP 255
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
G + + V+YN V++ + +E + A + EM + GC P+VVT N +I LC G V
Sbjct: 256 SYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVE 315
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
A VL ++PK GC P+ ++Y+ K +++ + D M+ G P + +Y LL
Sbjct: 316 PALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLL 375
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
R G + + ++++ GC+P +YN ++D L G A + EM +KGL
Sbjct: 376 TALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGL 434
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 118/241 (48%), Gaps = 12/241 (4%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G+ R EM V D ++Y+ + +C G+ A+ + EM
Sbjct: 129 YNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEML 185
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
++ DVV Y ++ A G AM++ EMR+ GC P +VT N V+ +C+ GRV
Sbjct: 186 RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVD 245
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL------EKPREILGLFDRMIESGIRPKMDTYV 318
+A L +P GC P+ ++Y+ + L E E++G M + G P + T+
Sbjct: 246 DAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMG---EMGQKGCPPNVVTFN 302
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
ML+ R G + P V +++ + GC+P+ +YN L+ A + +D A + + M ++
Sbjct: 303 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 362
Query: 379 G 379
G
Sbjct: 363 G 363
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 166/355 (46%), Gaps = 11/355 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +++ K + + L+ M+D + P+ T+ ++ V++A+
Sbjct: 195 TYTILLEATCKRSGYKQAMKLLDEMRDKGCT-PDIVTYNVVVNGICQEGRVDDAIEFLKN 253
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
L +G + + VSY ++ LC + +A+EL GE G +NM++
Sbjct: 254 LPSYGCEPNTVSYNIVLKGLCTAERWEDAEEL-MGEMGQKGCP-----PNVVTFNMLISF 307
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ E E++ K G + SY+ + CK K KA+ M +G D
Sbjct: 308 LCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPD 367
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+V+YNT++ A+ S VD A+ + ++++ GC P +++ NTVI L + G+ +EA +L
Sbjct: 368 IVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLN 427
Query: 272 EMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM KG PD+ITY L ++ + + F ++ + GIRP Y ++ +
Sbjct: 428 EMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRR 487
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAK 383
++ M GC P+E Y L++ L +G++ AR +E+ ++G+ K
Sbjct: 488 ETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRK 542
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 118/238 (49%), Gaps = 3/238 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++RG +EM +R V D+ +Y+I ++ CK +A+KL EM+
Sbjct: 161 YNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 220
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
KG D+V YN V+ + VD A+ + + GC+P+ V+ N V+K LC R
Sbjct: 221 DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWE 280
Query: 265 EAYAVLAEMPKKGCVPDVITYHCF--FRCLEKPRE-ILGLFDRMIESGIRPKMDTYVMLL 321
+A ++ EM +KGC P+V+T++ F C + E L + +++ + G P +Y LL
Sbjct: 281 DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLL 340
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
F + + M GC PD +YN L+ AL G +D+A + ++ KG
Sbjct: 341 HAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 398
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 6/172 (3%)
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
DV+AYN ++ + +D A R+ + EM +P T NT+I+ LC GR A AVL
Sbjct: 125 DVMAYNAMVAGYCGAGQLDAARRL---VAEMPVEPDAYTYNTLIRGLCGRGRTANALAVL 181
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
EM ++ CVPDV+TY K ++ + L D M + G P + TY +++ +
Sbjct: 182 DEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQE 241
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
G + K + GC P+ +YN ++ L + A + EM KG
Sbjct: 242 GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKG 293
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 40/185 (21%)
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL----------------- 270
+D A+R+ R +P TC +IK L +GR EA VL
Sbjct: 81 LDEALRLVGSAR----RPDAGTCAALIKKLSASGRTAEARRVLAACGPDVMAYNAMVAGY 136
Query: 271 -------------AEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKM 314
AEMP + PD TY+ R L + L + D M+ P +
Sbjct: 137 CGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDV 193
Query: 315 DTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
TY +LL + + + +M + GC+PD YN +V+ + +G +D A ++ +
Sbjct: 194 VTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKN 253
Query: 375 MFAKG 379
+ + G
Sbjct: 254 LPSYG 258
>gi|297844848|ref|XP_002890305.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336147|gb|EFH66564.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 860
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 172/397 (43%), Gaps = 51/397 (12%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
ND+ AL FF W++ F H TY +++ LG+ +F L+ M + PN
Sbjct: 342 NDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRD-GCQPNTV 400
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE 127
T+ + Y A+ +NEAM FN++ E G K D V+YC L+D I A+
Sbjct: 401 TYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLID--------IHAK------ 446
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
+G +++ + ++ M G+ D +YS+ ++ +
Sbjct: 447 ------AGFLDI---------------------AMDMYQRMQAGGLSPDTFTYSVIINCL 479
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
K+G A KL+ EM +G ++V YN ++ + A+++YR+M+ G +P
Sbjct: 480 GKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEPDK 539
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGL---FDR 304
VT + V+++L G + EA AV EM +K +PD Y K + +
Sbjct: 540 VTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA 599
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID-KG 363
M+ +G+ P + T LL F R + + + + M LG P Y L+ D +
Sbjct: 600 MLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRS 659
Query: 364 MLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGE 400
LDM Y ++ A + P K+ G +GE
Sbjct: 660 KLDMG--YCGQLMAS--TGHPAHMFLLKMPAAGPNGE 692
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 113/237 (47%), Gaps = 7/237 (2%)
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKR-GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
N +L+ +M+ +G F+ + ++ G D H+Y+ + + ++ + KL EM
Sbjct: 335 NQVLK---QMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMV 391
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+ G + + V YN +I + G + ++ AM V+ +M+E GC+P VT T+I + + G +
Sbjct: 392 RDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLD 451
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLL 321
A + M G PD TY CL K + LF M++ G P + TY +++
Sbjct: 452 IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMM 511
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+ + +++ M+ G PD+ Y+ +++ L G L+ A EM K
Sbjct: 512 DLHAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 72/168 (42%), Gaps = 12/168 (7%)
Query: 224 VSEGVDFAMRVYR-------EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
+ E V +R +R ++ +G + N V+K + + G + L P
Sbjct: 301 IVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQP-- 358
Query: 277 GCVPDVITYHCFFRCLEKPRE---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
G D TY L + ++ I L D M+ G +P TY L+ +GR +L
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 334 FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
V+ +M+E GC PD Y L+D G LD+A + M A GLS
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS 466
>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 174/391 (44%), Gaps = 58/391 (14%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP-NHATFRI 72
AL+ F ++ F HT TY+ +I+ LG+ E D ++H+MK IP + +F
Sbjct: 56 ALQHFQYLTNTLAFKHTPLTYHVMIEKLGRNSELDALHYILHQMKI--ERIPCSQDSFIC 113
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNV 131
+ Y + L + A+ F ++ EFG K V Y +L+DAL GE+ N
Sbjct: 114 VLNSYKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDAL-------------LGESGNK 160
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
++MI +E M G+ ++ +Y++ + +CK+G
Sbjct: 161 -------------FHMI-------------GAVYENMRGEGMEPNVFTYNVLLKALCKNG 194
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
K A KL EM K+G D V+Y TV+ A+ V+ A V R G + V CN
Sbjct: 195 KLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREV---ARRFGAEGVVSVCN 251
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIES 308
+I LC GRV E + ++ EM G P+V++Y L E+ L + +MI
Sbjct: 252 ALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRR 311
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML--- 365
G RP + T+ L++ + G + +W+ M G P+ YN L++ L G L
Sbjct: 312 GCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEA 371
Query: 366 -DMARKYDEEMFAKGLSAKPREELGTKLVQG 395
D+ + +++ F +P + LV G
Sbjct: 372 VDVCGRMEKDCF-----CRPNVTTYSTLVHG 397
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 174/390 (44%), Gaps = 28/390 (7%)
Query: 1 RETLSCYANDWK------RALEFFNWV-ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNL 53
+++ C N +K RAL+ F + E C T YN ++D L E +++
Sbjct: 108 QDSFICVLNSYKNSGLGDRALKMFYRIKEFGCK--PTVKIYNHLLDAL--LGESGNKFHM 163
Query: 54 IHRMKDN---PSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVD 109
I + +N PN T+ ++ K ++ A ++ + G + D VSY +V
Sbjct: 164 IGAVYENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVA 223
Query: 110 ALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMD 169
A+CE V EA+E+ + G G+V + N ++ G + G+ +EM
Sbjct: 224 AMCEDGRVEEAREVA----RRFGAEGVVS-----VCNALICGLCREGRVGEVFGLMDEMV 274
Query: 170 KRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVD 229
GV ++ SYS + + G+ A+ + +M ++G + +V ++++++ + V
Sbjct: 275 GNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVG 334
Query: 230 FAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG-CVPDVITYHCF 288
+ ++R M G +P+VV NT++ LC +G + EA V M K C P+V TY
Sbjct: 335 EGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTL 394
Query: 289 FRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
K ++ G ++++M+ G+RP + Y ++ + + + M GC
Sbjct: 395 VHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGC 454
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEM 375
P +N + L G + A + ++M
Sbjct: 455 PPTVVTFNTFIKGLCCGGRVLWAMRVVDQM 484
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 146/349 (41%), Gaps = 45/349 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+Y+SVI L E +L+ ++ +M PN TF + K Y V E +G +
Sbjct: 284 SYSSVISWLSDVGEVELALAVLGKMIRRGCR-PNVHTFSSLMKGYFLGGRVGEGVGLWRV 342
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G++ + V Y L++ LC ++ EA ++C K+
Sbjct: 343 MVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDC-------------------- 382
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
CR ++ +YS + K+G A +++ +M G++ +
Sbjct: 383 --------FCR------------PNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPN 422
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
VV Y +++ + + D A R+ M GC P+VVT NT IK LC GRV A V+
Sbjct: 423 VVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVD 482
Query: 272 EMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+M + GC+PD TY+ L + +E L + E + + TY ++ F G
Sbjct: 483 QMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHG 542
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
V V +M G PD N ++ A G + A ++ + + A
Sbjct: 543 KEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITA 591
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 110/223 (49%), Gaps = 16/223 (7%)
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM--RVYREMREMGCQPS 246
SG +A+K++ +K+ G K V YN ++ A+ G F M VY MR G +P+
Sbjct: 120 NSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPN 179
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL------EKPREILG 300
V T N ++K LC+NG++ A +L EM K+GCVPD ++Y + E+ RE+
Sbjct: 180 VFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVAR 239
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
F G+ + + L + GR G VF + +M G P+ +Y++++ L
Sbjct: 240 RFG---AEGVVSVCNALICGLCREGRVG---EVFGLMDEMVGNGVDPNVVSYSSVISWLS 293
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQSG 403
D G +++A +M +G +P + L++G G + G
Sbjct: 294 DVGEVELALAVLGKMIRRG--CRPNVHTFSSLMKGYFLGGRVG 334
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 110/287 (38%), Gaps = 49/287 (17%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A D + A E +N + +C Y S++D+L K FD ++ LI M + P
Sbjct: 401 AGDLQGASEVWNKM-VNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCP-PTV 458
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGE 127
TF K V AM +++ +G
Sbjct: 459 VTFNTFIKGLCCGGRVLWAMRVVDQMQRYGC----------------------------- 489
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
+ T+ YN +L G F ++ + E E+++R V +L +Y+ M
Sbjct: 490 -----------LPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGF 538
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG----VSEGVDFAMRVYREMREMGC 243
GK +++ M G+K D + N VI A V + F R+ +E+ C
Sbjct: 539 SSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRI-TAGKEL-C 596
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR 290
P ++ +++ +C + + EA L +M KG P++ T+ R
Sbjct: 597 -PDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVR 642
>gi|115448805|ref|NP_001048182.1| Os02g0759500 [Oryza sativa Japonica Group]
gi|46805701|dbj|BAD17102.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47497356|dbj|BAD19395.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537713|dbj|BAF10096.1| Os02g0759500 [Oryza sativa Japonica Group]
gi|125583759|gb|EAZ24690.1| hypothetical protein OsJ_08460 [Oryza sativa Japonica Group]
gi|215704115|dbj|BAG92955.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766866|dbj|BAG99094.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 555
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 172/383 (44%), Gaps = 20/383 (5%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILG----KFFEFDLSWNLIHRMKDNPS-SI 64
D K A FF W + H TYN VIDIL K +F + +++ MK + S+
Sbjct: 125 DEKLAFRFFVWASHQDGYEHEAATYNDVIDILSGTRYKARQFGVLCDVLDHMKRRRTRSV 184
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQEL 123
P I+ + Y HL + + E N L+DA C+ V EA E+
Sbjct: 185 PVDDLLGIL-RAYTEKHLTHLRKLAKKRRVRMRTPPETDALNVLLDAFCKCGMVREA-EV 242
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F K + + Y+++ GW + + + EEM + + +Y+
Sbjct: 243 VFSRVKR------KLLGNAETYSILFFGWCRARDPKRAMKVLEEMIQMKHTPENFTYNAA 296
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMD---VVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+D C +G +A L++ M+ +G + Y+ +I A+ + ++ + EMR+
Sbjct: 297 IDSFCSAGLVSEARDLFEFMRTEGSTISSPTAKTYSIMIAALAKAGQMEECFELISEMRK 356
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC---LEKPRE 297
GC P V T +I+ + ++ AY VL EM K G PD++TY+CF + L+K +
Sbjct: 357 CGCMPDVSTYKDLIEGMLLVDKLDAAYCVLDEMAKAGFPPDIVTYNCFLKVLCGLQKADD 416
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
L L +RMIE+ P + TY ML+ F +W +M++ GC Y ++D
Sbjct: 417 ALELCERMIEAHCEPSVHTYNMLMVMFFEMREPDRAINIWIEMDKRGCHRAVDTYETMID 476
Query: 358 ALIDKGMLDMARKYDEEMFAKGL 380
L D G + A +E+ +G+
Sbjct: 477 GLFDSGRTEDATALLDEVINRGM 499
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 130/310 (41%), Gaps = 18/310 (5%)
Query: 31 TDTYNSVIDIL---GKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAM 87
TD N ++D G E ++ ++ + R + N T+ I+F + A AM
Sbjct: 221 TDALNVLLDAFCKCGMVREAEVVFSRVKR-----KLLGNAETYSILFFGWCRARDPKRAM 275
Query: 88 GTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYN 146
++ + E +Y +D+ C V EA++L F + G + + K Y+
Sbjct: 276 KVLEEMIQMKHTPENFTYNAAIDSFCSAGLVSEARDL-FEFMRTEGST--ISSPTAKTYS 332
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
+++ K +C E EM K G + D+ +Y ++ M K A + EM K
Sbjct: 333 IMIAALAKAGQMEECFELISEMRKCGCMPDVSTYKDLIEGMLLVDKLDAAYCVLDEMAKA 392
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
G D+V YN ++ + + D A+ + M E C+PSV T N ++ + E A
Sbjct: 393 GFPPDIVTYNCFLKVLCGLQKADDALELCERMIEAHCEPSVHTYNMLMVMFFEMREPDRA 452
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIR---PKMDTYVML 320
+ EM K+GC V TY L + + L D +I G++ K D ++
Sbjct: 453 INIWIEMDKRGCHRAVDTYETMIDGLFDSGRTEDATALLDEVINRGMKLSYKKFDAIMLR 512
Query: 321 LRKFGRWGFL 330
L G G +
Sbjct: 513 LSAVGNLGAI 522
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 106/240 (44%), Gaps = 16/240 (6%)
Query: 6 CYANDWKRALEFFNWVETDCHF--THTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
C A A + F ++ T+ + T TY+ +I L K + + + LI M+
Sbjct: 301 CSAGLVSEARDLFEFMRTEGSTISSPTAKTYSIMIAALAKAGQMEECFELISEMR-KCGC 359
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+P+ +T++ + + + ++ A +++ + G D V+Y + LC + +A E
Sbjct: 360 MPDVSTYKDLIEGMLLVDKLDAAYCVLDEMAKAGFPPDIVTYNCFLKVLCGLQKADDALE 419
Query: 123 LCFGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
LC ++E + YNM++ +F+M + W EMDKRG + + +
Sbjct: 420 LC---------ERMIEAHCEPSVHTYNMLMVMFFEMREPDRAINIWIEMDKRGCHRAVDT 470
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y +D + SG+ A L E+ +G+K+ ++ ++ + + R+ MR
Sbjct: 471 YETMIDGLFDSGRTEDATALLDEVINRGMKLSYKKFDAIMLRLSAVGNLGAIHRLSEHMR 530
>gi|6721172|gb|AAF26800.1|AC016829_24 hypothetical protein [Arabidopsis thaliana]
Length = 572
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 177/386 (45%), Gaps = 16/386 (4%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+ +DW+ AL W E+ H++D Y+ +DILGK ++D + RM+ + N
Sbjct: 161 FRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLN 220
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV-DALCEYKHVIEAQELCF 125
T + +R+ A EA+G F++L EFGL+ NL+ D LC+ K V +A+ +
Sbjct: 221 --TVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLL 278
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
++ + +N+ + GW K + + +EM G + SY+ +
Sbjct: 279 QLKSHITPNA-------HTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIR 331
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
C+ + K ++ EM+ G + + Y T++ ++ + + A+RV M+ GC+P
Sbjct: 332 CYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKP 391
Query: 246 SVVTCNTVIKLLCENGRVREAYAVL-AEMPKKGCVPDVITYHCFFRCL---EKPREILGL 301
+ N +I L GR+ EA V EMP+ G + TY+ ++ + + L
Sbjct: 392 DSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIEL 451
Query: 302 FDRMIESGI-RPKMDTYVMLLRKFGRWGFLRPVFVVWKKM-EELGCSPDEFAYNALVDAL 359
M S + P + TY LLR + G + V + K+M + S DE Y L+ L
Sbjct: 452 LKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRL 511
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPR 385
M + A EEM ++ ++ + R
Sbjct: 512 CRANMCEWAYCLFEEMISQDITPRHR 537
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 154/320 (48%), Gaps = 10/320 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+H F I+ Y V++AM F+K+ GL D V+Y ++DALC V +A
Sbjct: 376 PDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQ 435
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
FG + G + ++ ++ G W K E EM RG+ + ++
Sbjct: 436 -FGRLISEGLTP-----DAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTL 489
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
++ +CK G +A ++ M + ++ DV+ YNT+I + VD A ++ M G
Sbjct: 490 LNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGV 549
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG--- 300
+P+ VT NT+I C+NGR+ +A+++ +M KG P ++TY + L + R
Sbjct: 550 KPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKE 609
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L+ MI+SGI+ + TY ++L + +++ + + + +N ++DAL+
Sbjct: 610 LYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALL 669
Query: 361 DKGMLDMARKYDEEMFAKGL 380
G D A+ + A+GL
Sbjct: 670 KGGRHDEAKDLFASLLARGL 689
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 163/383 (42%), Gaps = 29/383 (7%)
Query: 23 TDCHFTHTT-------DTYNSVIDILGKFFEFD-----LSWNLIHRMK--DNPSSIPNHA 68
TD H H T +S++D+ + ++ +L RM P PN
Sbjct: 33 TDSHHAHHAFDELLHRPTTSSIVDLNRALSDAARHSPAVAISLFRRMVMVARPKVPPNLI 92
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGE 127
T+ ++ ++ A ++ G + +++ L+ ALC+ K EA ++
Sbjct: 93 TYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRR 152
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM----DKRG-VVKDLHSYSI 182
+G + V Y ++L+G + + M D RG D+ SY+
Sbjct: 153 MPVLGCTPNVFS-----YTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNT 207
Query: 183 YMDIMCKSGKPW-KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
++ + + G+ A L+ +M +G+ DVV YN++I A+ + +D A V M +
Sbjct: 208 VINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKN 267
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREI 298
G P+ +T N+++ C +G+ +A V M + G PDV TY+ L + E
Sbjct: 268 GAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEA 327
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+FD M++ G +P TY LL + G L + + M G PD + +N L+
Sbjct: 328 RKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGT 387
Query: 359 LIDKGMLDMARKYDEEMFAKGLS 381
G +D A +M +GL+
Sbjct: 388 YTKHGKVDDAMLLFSKMRRQGLN 410
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 143/370 (38%), Gaps = 54/370 (14%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS+I L K D + ++ RM N ++PN T + Y ++ N+A+G F +
Sbjct: 240 TYNSIISALSKARAMDKAAVVLVRMVKN-GAMPNRITHNSLLHGYCSSGKPNDAIGVFKR 298
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G++ +V +Y L+ LC+ +EA
Sbjct: 299 MCRDGVEPDVFTYNTLMGYLCKNGRSMEA------------------------------- 327
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
R+ ++ M KRG + +Y + G K L M + GI+ D
Sbjct: 328 ----------RKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPD 377
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+N +I VD AM ++ +MR G P VT V+ LC G+V +A A
Sbjct: 378 HYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFG 437
Query: 272 EMPKKGCVPDVITYHCFFRCL------EKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ +G PD + + L +K E L MI GI P + LL
Sbjct: 438 RLISEGLTPDAVVFRNLIHGLCARDKWDKAEE---LAVEMIGRGICPNNIFFNTLLNHLC 494
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
+ G + ++ M + D YN L+D G +D A K E M G+ KP
Sbjct: 495 KEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGV--KPN 552
Query: 386 EELGTKLVQG 395
E ++ G
Sbjct: 553 EVTYNTMING 562
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 171/408 (41%), Gaps = 52/408 (12%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
+N +I K + D + L +M+ + P+ T+ I+ V++AM F +L
Sbjct: 381 FNILIGTYTKHGKVDDAMLLFSKMRRQGLN-PDTVTYGIVMDALCMVGKVDDAMAQFGRL 439
Query: 94 DEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
GL D V + NL+ LC +A+EL + +G G+ N +N +L
Sbjct: 440 ISEGLTPDAVVFRNLIHGLCARDKWDKAEELAV---EMIG-RGICPNNI--FFNTLLNHL 493
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K + + ++ M + V +D+ +Y+ +D C GK +A KL + M G+K +
Sbjct: 494 CKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNE 553
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V YNT+I + ++ A ++R+M G P +VT +T+++ L + R A +
Sbjct: 554 VTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLW 613
Query: 273 MPKKGCVPDVITYH------CFFRCLEKPREIL--------------------------- 299
M K G D+ TY+ C C + I
Sbjct: 614 MIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGR 673
Query: 300 -----GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
LF ++ G+ P + TY ++++ G L + ++ +E+ GC+ + NA
Sbjct: 674 HDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNA 733
Query: 355 LVDALIDKGMLDMA----RKYDEEMFAKGLSAKPREELGTKLVQGGLD 398
LV L+ KG + A K DE F+ L A E L + G D
Sbjct: 734 LVGKLLQKGEVRKAGVYLSKIDENNFS--LEASTAESLVLLVSSGKYD 779
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 178/380 (46%), Gaps = 14/380 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTH-TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C D + A++ + D T + Y+++ID L K+ ++ L M S
Sbjct: 423 CKIGDTRGAIKLLRKI--DGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGIS- 479
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
+ T+ + + + EA+G N++ + +V +Y LVDAL + V EA+ +
Sbjct: 480 ADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSV 539
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
V V+ + YN ++ G+ + K + + M GV D+H+Y+I
Sbjct: 540 L-----AVMLKACVKPD-VFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTIL 593
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
++ CKS +A+ L+KEM +K + D V Y++++ + S + + + EMR+ G
Sbjct: 594 INGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQ 653
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILG 300
V+T N++I LC+NG + +A A+ +M +G P+ T+ L K ++
Sbjct: 654 PADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQE 713
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+F ++ G + Y +++ + G L + KMEE GC P+ ++ +++AL
Sbjct: 714 VFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALF 773
Query: 361 DKGMLDMARKYDEEMFAKGL 380
K D A K +M A+GL
Sbjct: 774 KKDENDKAEKLLRQMIARGL 793
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 173/381 (45%), Gaps = 13/381 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C D + A++F ++ + YN++ID L K+ ++ L M S
Sbjct: 109 CRIGDTRAAIKFLRKIDGRLA-KPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGIS-A 166
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELC 124
N T+ + + + EA+G N + + V +Y LVDALC+ V EA+ +
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVL 226
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
V V+ N Y+ ++ G+F + K + + M GV D+HSY+I +
Sbjct: 227 -----AVMLKACVKSNVIT-YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMI 280
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ CK + KA+ L+KEM ++ +N ++ + + A+ + + G Q
Sbjct: 281 NGFCKIKRVDKALNLFKEMILSRFP-PIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQ 339
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGL 301
P + T N +I C G++ ++VLA++ K+G P +T + + CL+ + ++ L
Sbjct: 340 PDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHF 399
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
D+++ G + +Y L+ + G R + +K++ P+ Y+ ++DAL
Sbjct: 400 HDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCK 459
Query: 362 KGMLDMARKYDEEMFAKGLSA 382
++ A EM KG+SA
Sbjct: 460 YQLVSEAYGLFSEMTVKGISA 480
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 155/356 (43%), Gaps = 17/356 (4%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
+N ++D K + + +L HR++ P+ T I+ + + K+
Sbjct: 310 FNKILDSFAKMKHYSTAVSLSHRLELKGIQ-PDLFTLNILINCFCHMGQITFGFSVLAKI 368
Query: 94 DEFGLK-DEVSYCNLVDALC---EYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+ G V+ L+ LC + K + + + GF ++N+ Y ++
Sbjct: 369 LKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ----GF----QLNQVS-YATLI 419
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G K+ + ++D R ++ YS +D +CK +A L+ EM KGI
Sbjct: 420 NGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGIS 479
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
DVV Y+T+I + + A+ + EM P V T ++ L + G+V+EA +V
Sbjct: 480 ADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSV 539
Query: 270 LAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
LA M K PDV TY+ + + + ++ +F+ M G+ P + TY +L+ F +
Sbjct: 540 LAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCK 599
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ ++K+M + PD Y++LVD L G + +EM +G A
Sbjct: 600 SKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPA 655
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 112/238 (47%), Gaps = 3/238 (1%)
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
T N +++G + F +++ +G + SY+ ++ +C+ G A+K +
Sbjct: 63 TVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLR 122
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
++ + K +V YNT+I A+ + V A ++ EM G +VVT +T+I C G
Sbjct: 123 KIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVG 182
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYV 318
+++EA +L M K P+V TY+ L K +E + M+++ ++ + TY
Sbjct: 183 KLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYS 242
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
L+ + ++ V+ M +G +PD +YN +++ +D A +EM
Sbjct: 243 TLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMI 300
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 3/199 (1%)
Query: 174 VKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMR 233
+KD S ++ ++ ++ + ++ K+G D V NT+I+ + + V A+
Sbjct: 25 LKDCDSPPFFLPPSIQNVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALH 84
Query: 234 VYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE 293
+ ++ G Q + V+ T+I +C G R A L ++ + P+V Y+ L
Sbjct: 85 FHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALC 144
Query: 294 KPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF 350
K + E GLF M GI + TY L+ F G L+ + M +P+
Sbjct: 145 KYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVC 204
Query: 351 AYNALVDALIDKGMLDMAR 369
YN LVDAL +G + A+
Sbjct: 205 TYNILVDALCKEGKVKEAK 223
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 3/120 (2%)
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLR 322
+ +VL ++ K+G PD +T + + CL+ + +E L D+++ G + +Y L+
Sbjct: 47 SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
R G R +K++ P+ YN ++DAL ++ A EM KG+SA
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 178/380 (46%), Gaps = 14/380 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHT-TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C D + A++F + D T YN++ID + K+ ++ L M S
Sbjct: 175 CKIGDTRAAIKFLRKI--DGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGIS- 231
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
+ T+ + + + EA+G N++ + V +Y LVDALC+ V EA+ +
Sbjct: 232 ADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSV 291
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
V V+ + Y+ ++ G+F + K + + M GV D+H+Y+I
Sbjct: 292 L-----AVMLKACVKPDVIT-YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTIL 345
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
++ CK+ +A+ L+KEM +K + +V Y+++I + S + + + EMR+ G
Sbjct: 346 INGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQ 405
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILG 300
V+T +++I LC+NG + A A+ +M + P++ T+ L K ++
Sbjct: 406 PADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQE 465
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+F ++ G + TY +++ + G L + KME+ GC P+ F + ++ AL
Sbjct: 466 VFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALF 525
Query: 361 DKGMLDMARKYDEEMFAKGL 380
K D A K +M A+GL
Sbjct: 526 KKDENDKAEKLLRQMIARGL 545
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 159/356 (44%), Gaps = 17/356 (4%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
+N ++D K + + +L HR++ P+ T I+ + + K+
Sbjct: 62 FNKILDSFAKMKHYSTAVSLSHRLELKGIQ-PDLITLNILINCFCHMGQITFGFSVLAKI 120
Query: 94 DEFGLK-DEVSYCNLVDALC---EYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+ G D V+ L+ LC + K + + + GF ++N+ Y ++
Sbjct: 121 LKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ----GF----QLNQVS-YATLI 171
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G K+ +F ++D R D+ Y+ +D MCK +A L+ EM KGI
Sbjct: 172 NGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGIS 231
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
DVV YNT+I + + A+ + EM P+V T N ++ LC+ G+V+EA +V
Sbjct: 232 ADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSV 291
Query: 270 LAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
LA M K PDVITY + + + ++ +F+ M G+ P + TY +L+ F +
Sbjct: 292 LAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCK 351
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ ++K+M + P Y++L+D L G + +EM +G A
Sbjct: 352 NKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPA 407
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 84/174 (48%), Gaps = 3/174 (1%)
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
++ +N ++ + + A+ + + G QP ++T N +I C G++ ++VLA
Sbjct: 59 IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118
Query: 272 EMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
++ K+G PD +T + + CL+ + ++ L D+++ G + +Y L+ + G
Sbjct: 119 KILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIG 178
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
R +K++ PD YN ++DA+ ++ A EM KG+SA
Sbjct: 179 DTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISA 232
>gi|297805706|ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316573|gb|EFH46996.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 680
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 186/408 (45%), Gaps = 21/408 (5%)
Query: 3 TLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPS 62
+L NDW+R+L +WV + +T + YN V+ + + +F ++ L M+
Sbjct: 129 SLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFGIAHGLFDEMRQRAL 188
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDA---LCEYKHVI 118
+ P+ T+ + + + + A+ K+++ + D V Y NL++ LC+Y I
Sbjct: 189 A-PDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAI 247
Query: 119 EAQELCFGENKNVGFS-GLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
F K G + LV YN ++ + K + + R +EM++ GV +
Sbjct: 248 S----IFSRLKRSGITPDLVA------YNSMINVYGKAKLFKEARVLIKEMNEAGVSPNT 297
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
SYS + + ++ K +A+ ++ EMK+ +D+ N +I G + V A R++
Sbjct: 298 VSYSTLLSVYVENHKFLEALSVFAEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWS 357
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
+R+M +P+VV+ NT++++ E EA + M +K +V+TY+ + K E
Sbjct: 358 LRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTME 417
Query: 298 ---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
L M GI P TY ++ +G+ G L +++K+ G D+ Y
Sbjct: 418 HEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQT 477
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQS 402
++ A G++ A++ E+ K PRE T L + G E +
Sbjct: 478 MIVAYERVGLMGHAKRLLHEL--KLPDNIPRETAITILAKAGSTEEAT 523
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 167/382 (43%), Gaps = 44/382 (11%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D+ +A+ F+ ++ T YNS+I++ GK F + LI M + S PN +
Sbjct: 242 DYSKAISIFSRLKRSG-ITPDLVAYNSMINVYGKAKLFKEARVLIKEMNEAGVS-PNTVS 299
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNL-VDALCEYKHVIEAQELCFGEN 128
+ + YV H EA+ F ++ E +++ CN+ +D + V EA L +
Sbjct: 300 YSTLLSVYVENHKFLEALSVFAEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSLR 359
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
K +V YN ILR + + +G+ + M ++ + +++ +Y+ + I
Sbjct: 360 KMDIEPNVVS------YNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 413
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ---- 244
K+ + KA L +EM+ +GI+ + + Y+T+I G + +D A +++++R G +
Sbjct: 414 KTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQV 473
Query: 245 ---------------------------PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
P + T I +L + G EA V + + G
Sbjct: 474 LYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGSTEEATWVFRQAFESG 533
Query: 278 CVPDVITYHCFFRCLEKPRE---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
V D+ + C + + ++ +F++M +G P + M+L +G+
Sbjct: 534 EVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNAIAMVLNAYGKQREFEKAD 593
Query: 335 VVWKKMEELGCS-PDEFAYNAL 355
V+++M+E GC PDE + L
Sbjct: 594 TVYREMQEEGCVFPDEVHFQML 615
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 177/404 (43%), Gaps = 34/404 (8%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVID-------ILGKFFEFDLSWNLIHRMK 58
C K+A EF +E TYN++I + G FDL MK
Sbjct: 202 CKEGKLKKAKEFIGLMEA-LGIKPNVVTYNTIIHGYCSRGRVEGARMIFDL-------MK 253
Query: 59 DNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHV 117
P+ T+ + EA G K+ E GL+ V+Y L+D C ++
Sbjct: 254 CRGVK-PDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNL 312
Query: 118 IEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
E+ F + GL M YNM++ F + +EM ++G+V D
Sbjct: 313 ----EMAFDYRDKMVREGL--MPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDS 366
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
+Y+I ++ C+ G KA L+ EM KGI+ V Y ++I + + A ++ +
Sbjct: 367 VTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEK 426
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF--RC---- 291
+ G P ++ N +I C NG + A+A+L EM + VPD +T++ RC
Sbjct: 427 IVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGK 486
Query: 292 LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFA 351
+E RE L + M GI+P +Y L+ + + G ++ F V +M +G +P
Sbjct: 487 VEAARE---LIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLT 543
Query: 352 YNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
YNAL+ L D A + +EM +KG++ P + L++G
Sbjct: 544 YNALIQGLCKNEEGDHAEQLLKEMISKGIT--PNDNTYLSLIEG 585
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 142/302 (47%), Gaps = 21/302 (6%)
Query: 102 VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK----IYNMILRGWFKMSW 157
V++ +++ LC+ + +A+E F GL+E K YN I+ G+
Sbjct: 192 VTFNIMINVLCKEGKLKKAKE----------FIGLMEALGIKPNVVTYNTIIHGYCSRGR 241
Query: 158 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
R ++ M RGV D ++Y ++ MCK GK +A + ++MK+ G++ V YNT
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNT 301
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
+I ++ A +M G P+V T N +I L + ++ EA ++ EM +KG
Sbjct: 302 LIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKG 361
Query: 278 CVPDVITYHCFF----RCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
VPD +TY+ RC ++ L D MI GI+P TY L+ + G ++
Sbjct: 362 LVPDSVTYNILINGYCRC-GNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQA 420
Query: 334 FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLV 393
+++K+ G PD +NAL+D G +D A +EM + P E L+
Sbjct: 421 DDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEM--DQMKVVPDEVTFNTLM 478
Query: 394 QG 395
QG
Sbjct: 479 QG 480
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 116/249 (46%), Gaps = 3/249 (1%)
Query: 135 GLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPW 194
G++ + +Y++++R ++ E ++ M +GV+ +H+ + + + KS +
Sbjct: 114 GVLGIKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTE 173
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
KA LY EM + IK VV +N +I + + A M +G +P+VVT NT+I
Sbjct: 174 KAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTII 233
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIR 311
C GRV A + M +G PD TY F C E K E G+ ++M E G+R
Sbjct: 234 HGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLR 293
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
P TY L+ + G L F KM G P YN L+ AL +D A
Sbjct: 294 PTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGI 353
Query: 372 DEEMFAKGL 380
+EM KGL
Sbjct: 354 IKEMSEKGL 362
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 138/301 (45%), Gaps = 11/301 (3%)
Query: 96 FGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKM 155
G+K V Y L+ A CE K +A E CF K G + N +L + K
Sbjct: 116 LGIKTYVLYDLLIRACCELKRGDDAFE-CFDMMKGKGV-----IPHVHACNDMLSLFLKS 169
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
+ K + EM + + + +++I ++++CK GK KA + M+ GIK +VV Y
Sbjct: 170 NRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTY 229
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
NT+I V+ A ++ M+ G +P T + I +C+ G++ EA +L +M +
Sbjct: 230 NTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKE 289
Query: 276 KGCVPDVITYHCFFR--CLEKPREI-LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
G P +TY+ C + E+ D+M+ G+ P + TY ML+ +
Sbjct: 290 IGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDE 349
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKL 392
+ K+M E G PD YN L++ G + A +EM +KG+ +P T L
Sbjct: 350 ADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGI--QPTRVTYTSL 407
Query: 393 V 393
+
Sbjct: 408 I 408
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 109/225 (48%), Gaps = 6/225 (2%)
Query: 162 REFWEEMD-KRGV--VKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTV 218
RE + E+ RGV +K Y + + C+ + A + + MK KG+ V A N +
Sbjct: 103 REVFNELGVARGVLGIKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDM 162
Query: 219 IRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGC 278
+ S + A +Y EM M + SVVT N +I +LC+ G++++A + M G
Sbjct: 163 LSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGI 222
Query: 279 VPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFV 335
P+V+TY+ + G +FD M G++P TY + + G L
Sbjct: 223 KPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASG 282
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ +KM+E+G P YN L+D +KG L+MA Y ++M +GL
Sbjct: 283 MLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGL 327
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 170/354 (48%), Gaps = 19/354 (5%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
AL+ F ++ D TYN +ID+L + + D ++ L M+ PN T IM
Sbjct: 362 ALKVFEEMKKDA--APNLSTYNILIDMLCRAGKLDTAFELRDSMQ-KAGLFPNVRTVNIM 418
Query: 74 FKRYVTAHLVNEAMGTFNKLD-EFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
R + ++EA F ++D + DE+++C+L+D L + V +A ++
Sbjct: 419 VDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKV--------- 469
Query: 133 FSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
+ +++ + + +Y +++ +F + +++M + DL + YMD M K
Sbjct: 470 YEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFK 529
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
+G+P K +++E+K + D +Y+ +I + + + ++ M+E GC
Sbjct: 530 AGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRA 589
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMI 306
N VI C+ G+V +AY +L EM KG P V+TY L K E LF+
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 649
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
I + Y L+ FG+ G + +++ +++ + G +P+ + +N+L+DAL+
Sbjct: 650 SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALV 703
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 160/370 (43%), Gaps = 12/370 (3%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D RA+E+F W E H ++YNS++ ++ + FD ++ M P+ T
Sbjct: 77 DVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFG-PSVNT 135
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGEN 128
M V A+ + E + +F + S Y L+ A H L F +
Sbjct: 136 CIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTL-FQQM 194
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
+ +G+ V + + ++RG+ K +EM + D+ Y++ +D
Sbjct: 195 QELGYEPTVHL-----FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFG 249
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
K GK A K + E++ G+K D V Y ++I + + +D A+ ++ + + P
Sbjct: 250 KVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY 309
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE---KPREILGLFDRM 305
NT+I G+ EAY++L KG +P VI Y+C CL K E L +F+ M
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
+ P + TY +L+ R G L F + M++ G P+ N +VD L L
Sbjct: 370 KKDAA-PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 366 DMARKYDEEM 375
D A EEM
Sbjct: 429 DEACAMFEEM 438
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 127/264 (48%), Gaps = 5/264 (1%)
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
+ Y++++ G K + + E + M ++G V D +Y+I +D CK GK KA +L +
Sbjct: 552 ARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLE 611
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
EMK KG + VV Y +VI + + +D A ++ E + + +VV +++I + G
Sbjct: 612 EMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVG 671
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYV 318
R+ EAY +L E+ +KG P++ T++ L K EI L F M E P TY
Sbjct: 672 RIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYG 731
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+L+ + FV W++M++ G P +Y ++ L G + A + A
Sbjct: 732 ILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKAN 791
Query: 379 GLSAKPREELGTKLVQGGLDGEQS 402
G P +++G +G ++
Sbjct: 792 G--GVPDSACYNAMIEGLSNGNRA 813
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 113/242 (46%), Gaps = 3/242 (1%)
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
T+ YN+++ G+ K K + EEM +G + +Y +D + K + +A L++
Sbjct: 587 TRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFE 646
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
E K K I+++VV Y+++I G +D A + E+ + G P++ T N+++ L +
Sbjct: 647 EAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAE 706
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLF---DRMIESGIRPKMDTYV 318
+ EA M + C P+ +TY L K R+ F M + G++P +Y
Sbjct: 707 EINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYT 766
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
++ + G + ++ + + G PD YNA+++ L + A EE +
Sbjct: 767 TMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRR 826
Query: 379 GL 380
GL
Sbjct: 827 GL 828
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 108/252 (42%), Gaps = 8/252 (3%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F T TY SVID L K D ++ L K + N + + + ++EA
Sbjct: 618 FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIEL-NVVIYSSLIDGFGKVGRIDEA 676
Query: 87 MGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
+L + GL + ++ +L+DAL + + + EA +CF K + + Y
Sbjct: 677 YLILEELMQKGLTPNLYTWNSLLDALVKAEEINEAL-VCFQSMKELKCTP-----NQVTY 730
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
+++ G K+ + K FW+EM K+G+ SY+ + + K+G +A L+ K
Sbjct: 731 GILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKA 790
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G D YN +I + A ++ E R G TC ++ L +N + +
Sbjct: 791 NGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQ 850
Query: 266 AYAVLAEMPKKG 277
A V A + + G
Sbjct: 851 AAIVGAVLRETG 862
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 80/183 (43%), Gaps = 5/183 (2%)
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
+YN+++ + D ++ EM G PSV TC ++ + ++RE Y V+ M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 274 PKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
K P Y F + +L LF +M E G P + + L+R F + G +
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGT 390
+ +M+ D YN +D+ G +DMA K+ E+ A GL KP E T
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGL--KPDEVTYT 277
Query: 391 KLV 393
++
Sbjct: 278 SMI 280
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 100/231 (43%), Gaps = 11/231 (4%)
Query: 159 GKCREF------WEEMDKRGVVKDLHSYSIYMDIMC-KSGKPWKAVKLYKEMKKKGIKMD 211
+CR F EM G +++ I M + C K+ K + + + M+K +
Sbjct: 109 ARCRNFDALDQILGEMSVAGFGPSVNT-CIEMVLGCVKANKLREGYDVVQMMRKFKFRPA 167
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
AY T+I A D + ++++M+E+G +P+V T+I+ + GRV A ++L
Sbjct: 168 FSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLD 227
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM D++ Y+ K ++ F + +G++P TY ++ +
Sbjct: 228 EMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKAN 287
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L +++ +E+ P +AYN ++ G D A E AKG
Sbjct: 288 RLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 166/355 (46%), Gaps = 19/355 (5%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP-NHATFRIMFKRYVTAHLVNEAMGTFNK 92
++ ++ + K +FD+ +L +M++ IP NH T+ I+ + + A+ K
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQN--LGIPHNHYTYSILLNCFCRRSQLPLALAVLGK 141
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIYNMI 148
+ + G + D V+ +L++ C K + EA L +VEM T +N +
Sbjct: 142 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL---------VDQMVEMGYKPDTVTFNTL 192
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G F + + + M RG DL +Y ++ +CK G A+ L K+M+K I
Sbjct: 193 IHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 252
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ +VV YNT+I + + +D A ++ +M G +P V T N++I LC GR +A
Sbjct: 253 EANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASR 312
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFG 325
+L++M ++ P+V+T++ K +++ LFD MI+ I P + TY L+ F
Sbjct: 313 LLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC 372
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
L ++ M C PD YN L+ ++ + EM +GL
Sbjct: 373 MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 427
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 170/366 (46%), Gaps = 46/366 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +V++ L K + DL+ +L+ +M+ K + A++
Sbjct: 223 TYGTVVNGLCKRGDIDLALSLLKKME----------------KGKIEANV---------- 256
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
V Y ++D LC+YKH+ +A +L F + + G V YN ++
Sbjct: 257 ---------VIYNTIIDGLCKYKHMDDAFDL-FNKMETKGIKPDVF-----TYNSLISCL 301
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
W +M +R + ++ +++ +D K GK +A KL+ EM ++ I ++
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 361
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V YN++I + + +D A +++ M C P VVT NT+IK C+ RV E + E
Sbjct: 362 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFRE 421
Query: 273 MPKKGCVPDVITYHCFFRCLEKPRE---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M ++G V + +TY+ + L + + +F +M+ G+ P + TY +LL ++G
Sbjct: 422 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 481
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELG 389
L VV++ +++ P+ + YN +++ + G ++ + KG+ KP +
Sbjct: 482 LEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV--KPNVIIY 539
Query: 390 TKLVQG 395
T ++ G
Sbjct: 540 TTMISG 545
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 145/308 (47%), Gaps = 10/308 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ TF + + +EA+ +++ G + D +Y +V+ LC+ + A L
Sbjct: 184 PDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 243
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
K G +E N IYN I+ G K + + +M+ +G+ D+ +Y+
Sbjct: 244 LKKMEK-----GKIEANVV-IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSL 297
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ +C G+ A +L +M ++ I +VV +N++I A + A +++ EM +
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 357
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LG 300
P++VT N++I C + R+ EA + M K C+PDV+TY+ + K + + +
Sbjct: 358 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGME 417
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
LF M + G+ TY L++ + G ++KKM G PD Y+ L+D L
Sbjct: 418 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 477
Query: 361 DKGMLDMA 368
G L+ A
Sbjct: 478 KYGKLEKA 485
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 127/263 (48%), Gaps = 16/263 (6%)
Query: 33 TYNSVIDIL---GKFFEFDLSWN-LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
T+NS+ID GK E + ++ +I R D PN T+ + + ++EA
Sbjct: 328 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSID-----PNIVTYNSLINGFCMHDRLDEAQQ 382
Query: 89 TFNKL-DEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
F + + L D V+Y L+ C+ K V E EL F E G G T YN
Sbjct: 383 IFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMEL-FREMSQRGLVG-----NTVTYNT 436
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
+++G F+ ++ +++M GV D+ +YSI +D +CK GK KA+ +++ ++K
Sbjct: 437 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 496
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
++ ++ YN +I + + V+ ++ + G +P+V+ T+I C G EA
Sbjct: 497 MEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 556
Query: 268 AVLAEMPKKGCVPDVITYHCFFR 290
A+ EM + G +PD Y+ R
Sbjct: 557 ALFREMKEDGTLPDSGCYNTLIR 579
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 125/261 (47%), Gaps = 10/261 (3%)
Query: 125 FGEN-KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
FGE K+ F ++E +K +L KM+ + E+M G+ + ++YSI
Sbjct: 69 FGEMVKSRPFPSIIEFSK------LLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
++ C+ + A+ + +M K G + D+V ++++ + + A+ + +M EMG
Sbjct: 123 LNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGY 182
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LG 300
+P VT NT+I L + + EA A++ M +GC PD+ TY L K +I L
Sbjct: 183 KPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 242
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L +M + I + Y ++ ++ + F ++ KME G PD F YN+L+ L
Sbjct: 243 LLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLC 302
Query: 361 DKGMLDMARKYDEEMFAKGLS 381
+ G A + +M + ++
Sbjct: 303 NYGRWSDASRLLSDMIERKIN 323
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 3/176 (1%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
AV L+ EM K ++ ++ ++ A+ D + + +M+ +G + T + ++
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLN 124
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRP 312
C ++ A AVL +M K G PD++T ++ E + L D+M+E G +P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKP 184
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
T+ L+ + +M GC PD F Y +V+ L +G +D+A
Sbjct: 185 DTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 240
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 180/396 (45%), Gaps = 15/396 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTH--TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
C D LE F + D F T YN+++ L KF D + + +N S
Sbjct: 132 CSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQIS 191
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
PN TF M Y V EA +K+ + GL D +Y +L+ C K V A E
Sbjct: 192 -PNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYE 250
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ F G + N+ N+I G + + + + +M + + +Y++
Sbjct: 251 V-FLIMPQKG----CQRNEVSYTNLI-HGLCEAGRINEALKLFADMTEDNCCPTVRTYTV 304
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ + SG+ +A+ L+ EMK+KG + +V Y +I + +D A ++ EM E G
Sbjct: 305 LIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---L 299
PSVVT N +I C+ G + +A+ +L M C P+ TY+ L K R++ +
Sbjct: 365 LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAM 424
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
L ++M+E + P + TY L+ + L + + M E G PD++ Y+ +D L
Sbjct: 425 ALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTL 484
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+G ++ A + + AKG+ K E + T L+ G
Sbjct: 485 CKEGRVEEAGTLFDSVKAKGV--KANEVIYTALIDG 518
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 174/408 (42%), Gaps = 37/408 (9%)
Query: 6 CYANDWKRALEFF-NWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C A AL+ F + E +C T TY +I L + NL + MK+
Sbjct: 275 CEAGRINEALKLFADMTEDNC--CPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCE- 331
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQE- 122
PN T+ ++ + ++EA +++ E GL V+Y L+D C+ + +A E
Sbjct: 332 PNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEI 391
Query: 123 ----------------------LCFGENKNVGFSGLVEMNKTKI------YNMILRGWFK 154
LC + + L +M + K+ YN ++ G K
Sbjct: 392 LDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCK 451
Query: 155 MSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVA 214
++ M++ G+V D +YS+++D +CK G+ +A L+ +K KG+K + V
Sbjct: 452 VNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVI 511
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
Y +I +D A + M C P+ T N +I+ LC+ +++EA +++A+M
Sbjct: 512 YTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKML 571
Query: 275 KKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
G P V+TY + K L +F+ M+ G +P + TY L + G L
Sbjct: 572 TMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLE 631
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
V V KM E G PD Y L+D G+ A + + M G
Sbjct: 632 EVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTG 679
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 176/406 (43%), Gaps = 40/406 (9%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A E + +E++ T TYN +I L K + + L+++M + S P+ T+ +
Sbjct: 388 AFEILDLMESN-SCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLS-PSLITYNSL 445
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
+ + A + ++E GL D+ +Y +D LC+ V EA L F K G
Sbjct: 446 IHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTL-FDSVKAKG 504
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
V+ N+ IY ++ G+ K+ E M + + ++Y++ ++ +CK K
Sbjct: 505 ----VKANEV-IYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKK 559
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
+A L +M G+K VV Y +I + D A++V+ M +G QP V T
Sbjct: 560 MKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTA 619
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDR-------M 305
+ G + E V+A+M ++G +PD++TY + LGL R M
Sbjct: 620 FLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYAR----LGLTHRAFDFLKCM 675
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPV------------------FVVWKKMEELGCSP 347
+++G +P + +L++ ++ +++KM E GC+
Sbjct: 676 VDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTI 735
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLV 393
D Y AL+ + L+ A+ M +G+S P E++ L+
Sbjct: 736 DVSIYGALIAGFCQQERLEEAQGLVHHMKERGMS--PSEDIYNSLL 779
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/408 (19%), Positives = 155/408 (37%), Gaps = 99/408 (24%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
Y ++ID K + D++++L+ RM N + +PN T+ ++ + + EA K+
Sbjct: 512 YTALIDGYCKVGKIDVAYSLLERML-NDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKM 570
Query: 94 DEFGLKDEV-SYCNLVDALCE---YKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
G+K V +Y L+ + + + H ++ F ++G+ V Y L
Sbjct: 571 LTMGVKPTVVTYTILIGEMLKDGAFDHALKV----FNHMVSLGYQPDV-----CTYTAFL 621
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI----------------YMDIMCKSG-K 192
+F + + +M++ G++ DL +Y++ ++ M +G K
Sbjct: 622 HAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCK 681
Query: 193 PWK------------------------------------AVKLYKEMKKKGIKMDVVAYN 216
P A+KL+++M + G +DV Y
Sbjct: 682 PSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYG 741
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
+I E ++ A + M+E G PS N+++ C+ G EA
Sbjct: 742 ALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEA---------- 791
Query: 277 GCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVV 336
+ L D M+E+G+ P +++Y +L+ G V
Sbjct: 792 ----------------------VRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAV 829
Query: 337 WKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
+ + G + DE A+ L+D L+ + ++D + + M KG P
Sbjct: 830 FHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNP 877
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 65/153 (42%)
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
IY ++ G+ + + + M +RG+ Y+ +D CK G +AV+L
Sbjct: 737 VSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVD 796
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
M + G+ + +Y ++ + + + A V+ + G V +I L +
Sbjct: 797 AMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRD 856
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
V E ++ M +KGC P+ +TY LE+
Sbjct: 857 LVDECSELIDIMEEKGCQPNPLTYSLLIEGLER 889
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 150/320 (46%), Gaps = 16/320 (5%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELC 124
P+ T + K Y ++ A+ F + + +YC L+ LC+ + + EA +L
Sbjct: 57 PDVITHNTILKAYCQIGDLDRALSHF-RGKMWCSPTAFTYCILIHGLCQCQRIDEAYQL- 114
Query: 125 FGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
+++ + +YN ++ G KM R + M +R V D+ +Y+
Sbjct: 115 --------LDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYT 166
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+ C++ +A KL ++MK+ G+ D VAYN ++ + ++ ++ EM E
Sbjct: 167 SLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEA 226
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREI 298
G +P + NTV+ LCE+G+ EA +L +M +K C PDV+TY+ F + K E
Sbjct: 227 GREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEA 286
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
L + M+ P + TY L+ F R L + V + M + G SPD YN L+D
Sbjct: 287 ERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDG 346
Query: 359 LIDKGMLDMARKYDEEMFAK 378
L G L+ A + E M K
Sbjct: 347 LCKAGKLEEAHELLEVMVEK 366
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 170/361 (47%), Gaps = 20/361 (5%)
Query: 6 CYANDWKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C A + + ++ DCH YN +I L K + D + N++ M + S +
Sbjct: 103 CQCQRIDEAYQLLDEMIQKDCH--PDAAVYNCLIAGLCKMGKIDAARNVLKMMLER-SCV 159
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ + + ++EA K+ E GL D V+Y L++ LC+ + E +L
Sbjct: 160 PDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKL 219
Query: 124 CFGENKNVGFSGLVEMNK---TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+VE + T YN ++ + + + + E+M ++ D+ +Y
Sbjct: 220 ---------LEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTY 270
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ MD CK K +A +L ++M + V+ Y T+I ++ + A RV +M +
Sbjct: 271 NSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFK 330
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG 300
G P +VT N ++ LC+ G++ EA+ +L M +K C PDV+TY L K ++
Sbjct: 331 AGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDD 390
Query: 301 ---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
L + M+E G +P + T+ ++ F + G + V + M+E+ C+PD Y+ L+D
Sbjct: 391 ARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLID 450
Query: 358 A 358
Sbjct: 451 G 451
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 168/383 (43%), Gaps = 46/383 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS++D K + D + L+ M + P T+ + + A + +A
Sbjct: 269 TYNSLMDGFCKVSKMDEAERLLEDMVGRRCA-PTVITYTTLIGGFSRADRLADAYRVMED 327
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIYNMI 148
+ + G+ D V+Y L+D LC+ + EA EL +VE + Y+++
Sbjct: 328 MFKAGISPDLVTYNCLLDGLCKAGKLEEAHEL---------LEVMVEKDCAPDVVTYSIL 378
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G K+ R E M +RG +L +++ +D CK+GK + K+ + MK+
Sbjct: 379 VNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSC 438
Query: 209 KMDVVAYNTVIRA-------------VGVS----------EG------VDFAMRVYREMR 239
DVV Y+T+I +G+S EG V+ A V M
Sbjct: 439 TPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMT 498
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI- 298
+ GC P+ +I LC+ R EA +L M ++GC P++ TY L K + +
Sbjct: 499 KQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVE 558
Query: 299 --LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
+ + D M+E G P + TY L+ F + + + +K M + GC PD+ AYN L+
Sbjct: 559 DAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILI 618
Query: 357 DALIDKGMLDMARKYDEEMFAKG 379
G ++ A + + M KG
Sbjct: 619 SGFCQSGNVEKAIEVMQLMLEKG 641
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 151/354 (42%), Gaps = 11/354 (3%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
T T YN++++ L K + + L+ M + P+ ++ + + EA
Sbjct: 193 LTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGRE-PDTFSYNTVVACLCESGKYEEA 251
Query: 87 MGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
K+ E D V+Y +L+D C+ + EA+ L G Y
Sbjct: 252 GKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLL------EDMVGRRCAPTVITY 305
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
++ G+ + E+M K G+ DL +Y+ +D +CK+GK +A +L + M +
Sbjct: 306 TTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVE 365
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
K DVV Y+ ++ + VD A + M E GCQP++VT NT+I C+ G+V E
Sbjct: 366 KDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDE 425
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ VL M + C PDV+TY K + F + GI P +Y +L
Sbjct: 426 GHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL---GISPDKASYSSMLEGLC 482
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
G + V M + GC P Y ++ L D D A K + M +G
Sbjct: 483 STGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERG 536
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 152/334 (45%), Gaps = 23/334 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN ++D L K + + + L+ M + + P+ T+ I+ V++A
Sbjct: 339 TYNCLLDGLCKAGKLEEAHELLEVMVEKDCA-PDVVTYSILVNGLCKLGKVDDARLLLEM 397
Query: 93 LDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK---IYNMI 148
+ E G + V++ ++D C+ V E ++ + E++ T Y+ +
Sbjct: 398 MLERGCQPNLVTFNTMIDGFCKAGKVDEGHKV---------LELMKEVSCTPDVVTYSTL 448
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G+ K + + G+ D SYS ++ +C +GK +A ++ M K+G
Sbjct: 449 IDGYCKAN------RMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGC 502
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
Y +I + E D A+++ + M E GC+P++ T + +I LC+ RV +A
Sbjct: 503 PPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAIN 562
Query: 269 VLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
VL M +KGCVPDV TY F + K F M +SG P Y +L+ F
Sbjct: 563 VLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFC 622
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ G + V + M E GC+PD Y +L+ +L
Sbjct: 623 QSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSL 656
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 95/194 (48%), Gaps = 5/194 (2%)
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
++G +++ EM + DV+ +NT+++A +D A+ +R +M C P+
Sbjct: 36 RAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHFR--GKMWCSPTAF 93
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRM 305
T +I LC+ R+ EAY +L EM +K C PD Y+C L K +I + M
Sbjct: 94 TYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMM 153
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
+E P + TY L+ + L + +KM+E G +PD AYNAL++ L + L
Sbjct: 154 LERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQL 213
Query: 366 DMARKYDEEMFAKG 379
+ K EEM G
Sbjct: 214 EEVSKLLEEMVEAG 227
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 75/194 (38%), Gaps = 7/194 (3%)
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
+P + ++E K Y +I + + + EM P V+T N
Sbjct: 4 RPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHN 63
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY----HCFFRCLEKPREILGLFDRMIE 307
T++K C+ G + A + K C P TY H +C ++ E L D MI+
Sbjct: 64 TILKAYCQIGDLDRALSHFR--GKMWCSPTAFTYCILIHGLCQC-QRIDEAYQLLDEMIQ 120
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
P Y L+ + G + V K M E C PD Y +L+ LD
Sbjct: 121 KDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDE 180
Query: 368 ARKYDEEMFAKGLS 381
ARK E+M GL+
Sbjct: 181 ARKLMEKMKESGLT 194
>gi|125542844|gb|EAY88983.1| hypothetical protein OsI_10467 [Oryza sativa Indica Group]
Length = 525
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 163/357 (45%), Gaps = 26/357 (7%)
Query: 35 NSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR---IMFKRYVTAHLVNEAMGTFN 91
++ + +LG+ F W+L ++ + +P+ T R ++ R V E + +F
Sbjct: 108 DTALYVLGRARRFAHMWDL---LRSSRRLVPDAVTPRTAMVVLGRVAKVCSVRETVDSFR 164
Query: 92 KLDEF--GLKDEVS---YCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN-KTKIY 145
+L G D+ + L+ LC+ K + +A +NV + E + +
Sbjct: 165 RLSRMLRGRGDDQEGQLFNALLRTLCQEKSMSDA--------RNVYHALKYEFKVNRQTF 216
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N++L GW F EM + GV DL +Y+ +D CK+ A KL EM++
Sbjct: 217 NILLSGWKSAE---DAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMRE 273
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
K I DV+ Y ++I +G+ D A + +EM E+GC P V NT I+ R+ +
Sbjct: 274 KDISPDVITYTSLIGGLGLIGQPDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGD 333
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLR 322
A+A++ EM KG +P+ TY+ FFRC +I L++RM G P + + ++R
Sbjct: 334 AFALMEEMASKGLMPNATTYNLFFRCYYWAYDIGSAWQLYERMRSEGCFPNTQSCMFIVR 393
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R G + +W M G + L D L D+G LD A + +M G
Sbjct: 394 LCHRHGRVAQALELWSDMVNNGFGSFTLVSDVLFDLLCDEGKLDEAERCFHQMIELG 450
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 7/186 (3%)
Query: 198 KLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLL 257
+L + ++ +G + +N ++R + + + A VY ++ V T LL
Sbjct: 165 RLSRMLRGRGDDQEGQLFNALLRTLCQEKSMSDARNVYHALK----YEFKVNRQTFNILL 220
Query: 258 CENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKM 314
+A A +AEM + G PD++TY+ C K R + L D M E I P +
Sbjct: 221 SGWKSAEDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDISPDV 280
Query: 315 DTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
TY L+ G G + K+M ELGC PD AYN + + L A EE
Sbjct: 281 ITYTSLIGGLGLIGQPDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEE 340
Query: 375 MFAKGL 380
M +KGL
Sbjct: 341 MASKGL 346
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 101/262 (38%), Gaps = 57/262 (21%)
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N TF I+ + +A +A ++ E G++ D V+Y +L+D C+ + V A +L
Sbjct: 212 NRQTFNILLSGWKSAE---DAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKL- 267
Query: 125 FGENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
L EM + I Y ++ G + K + +EM + G D+
Sbjct: 268 -----------LDEMREKDISPDVITYTSLIGGLGLIGQPDKAKHLLKEMHELGCYPDVP 316
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+Y+ + + + A L +EM KG+ + YN R + + A ++Y M
Sbjct: 317 AYNTAIRNFVIAKRLGDAFALMEEMASKGLMPNATTYNLFFRCYYWAYDIGSAWQLYERM 376
Query: 239 REMGCQPSVVTCNTVIKL-----------------------------------LCENGRV 263
R GC P+ +C +++L LC+ G++
Sbjct: 377 RSEGCFPNTQSCMFIVRLCHRHGRVAQALELWSDMVNNGFGSFTLVSDVLFDLLCDEGKL 436
Query: 264 REAYAVLAEMPKKGCVPDVITY 285
EA +M + G P + +
Sbjct: 437 DEAERCFHQMIELGQKPSNVAF 458
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 116/282 (41%), Gaps = 14/282 (4%)
Query: 1 RETLSCYANDWKRALEFFNWVETDCHFTHTTD--TYNSVIDILGKFFEFDLSWNLIHRMK 58
R+T + + WK A + +V D TYNS+ID K + ++ L+ M+
Sbjct: 213 RQTFNILLSGWKSAEDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMR 272
Query: 59 DNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVI 118
+ S P+ T+ + ++A ++ E G +V N ++ +
Sbjct: 273 EKDIS-PDVITYTSLIGGLGLIGQPDKAKHLLKEMHELGCYPDVPAYNTA-----IRNFV 326
Query: 119 EAQEL--CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
A+ L F + + GL M YN+ R ++ G + +E M G +
Sbjct: 327 IAKRLGDAFALMEEMASKGL--MPNATTYNLFFRCYYWAYDIGSAWQLYERMRSEGCFPN 384
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
S + + + G+ +A++L+ +M G + + + + +D A R +
Sbjct: 385 TQSCMFIVRLCHRHGRVAQALELWSDMVNNGFGSFTLVSDVLFDLLCDEGKLDEAERCFH 444
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL-AEMPKKG 277
+M E+G +PS V IK+L + E+ A L A+M + G
Sbjct: 445 QMIELGQKPSNVAFRR-IKILMQLANREESIARLTAQMAQFG 485
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 159/380 (41%), Gaps = 56/380 (14%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D + AL FF W + + H TD Y ++IDILG+ F +L+ +M+ I
Sbjct: 195 DAQNALRFFQWADKQEGYDHNTDAYFTMIDILGRAKMFTELQSLLQKMQTQGREIT---- 250
Query: 70 FRIMFKRYVTAH----LVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCF 125
R M +V ++ E++ FN + E G +
Sbjct: 251 -RSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYE-------------------------- 283
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
GL++ YN +L K + +M GV + +Y+ +
Sbjct: 284 --------PGLID----TAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQ 331
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
K A+KL +M + DVV Y VI A+ + ++ A V ++MRE GC+P
Sbjct: 332 CFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEP 391
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCLEKPREIL 299
++ T N +I+ LC R EA ++ M + G P++ TY C R L++ +E
Sbjct: 392 NIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKE-- 449
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+F+ + G++P TY LL + R L + K+M + C+PD Y L+ L
Sbjct: 450 -MFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGL 508
Query: 360 IDKGMLDMARKYDEEMFAKG 379
+ L A + +EM KG
Sbjct: 509 VQGNQLPDALRMHDEMENKG 528
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 164/414 (39%), Gaps = 45/414 (10%)
Query: 11 WKRALEFFNWVETDCHFTHTTDT-YNSVIDILGKFFEFDLSWNLIHRMKDNPSS------ 63
+K +LE FN ++ + DT YNSV+ L K + D++ NL +M +N S
Sbjct: 267 FKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTY 326
Query: 64 ----------------------------IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDE 95
P+ T+ I+ ++ +A G K+ E
Sbjct: 327 TSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRE 386
Query: 96 FGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFK 154
G + + +Y L+ LC + EA EL + G V N Y ++ G K
Sbjct: 387 NGCEPNIYTYNALIQGLCAVRRPEEALELV-----TLMEQGGVPPN-IYTYTILTHGLCK 440
Query: 155 MSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVA 214
+ + +E + E RG+ + +Y+ ++ C+ + +A+ + KEM + D V
Sbjct: 441 LRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVT 500
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
Y T+I+ + + A+R++ EM G + T N + + L G ++A M
Sbjct: 501 YTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMK 560
Query: 275 KKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
+G Y+ CL E L MI G P + TY +++ F R G L
Sbjct: 561 DRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLD 620
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
+ M E G PD +YN L+ ++G A + +G+ P+
Sbjct: 621 DADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQLYATALERGVVLNPK 674
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 163/366 (44%), Gaps = 10/366 (2%)
Query: 15 LEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
++FF W ++ H T TY ++I L ++ W +I M +P + +
Sbjct: 107 MQFFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVI 166
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGF 133
+ A ++ +A+ F ++ + +Y +++ L + EL + E N G
Sbjct: 167 RMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHEL-YNEMSNEGH 225
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
T Y+ ++ + K+ EM + G+ Y++ + + K
Sbjct: 226 CH----PDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNV 281
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
A+ L++EM+ + DV Y +IR +G + +D A Y EM+ C+P V N +
Sbjct: 282 HGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNM 341
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL----EKPREILGLFDRMIESG 309
I L + GR+ + + EM C+P+V+TY+ + L + E+ F+RM SG
Sbjct: 342 INFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSG 401
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
I P TY +L+ F + + ++ ++M+E G P AY +L+DAL D+A
Sbjct: 402 ISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLAC 461
Query: 370 KYDEEM 375
+ +E+
Sbjct: 462 ELFQEL 467
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 178/408 (43%), Gaps = 35/408 (8%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+ +++ E +N + + H T TY+++I K D + L++ MK+N P
Sbjct: 206 HEGQYEKVHELYNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQ-PT 264
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEA----- 120
+ ++ + V+ A+ F ++ + +V +Y L+ L + + EA
Sbjct: 265 AKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYH 324
Query: 121 ---QELCFGE----NKNVGFSG-----------LVEMNKTK------IYNMILRGWFKM- 155
+E C + N + F G EM + YN I++ F+
Sbjct: 325 EMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESK 384
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
S + ++E M G+ +YSI +D CK+ + KA+ L +EM +KG AY
Sbjct: 385 SRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAY 444
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
++I A+G ++ D A +++E++E S +IK L + GR+ +A + EM K
Sbjct: 445 CSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSK 504
Query: 276 KGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
GC P+V Y+ L + E L +M E G P +++Y ++L + G
Sbjct: 505 LGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHR 564
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ M+ PD +YN ++ AL GM + A + +EM A G
Sbjct: 565 AMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGF 612
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 147/331 (44%), Gaps = 10/331 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +I LGK D +++ H M+ P+ M A +++ + F +
Sbjct: 302 TYTELIRGLGKAGRIDEAYHFYHEMQREDCK-PDTVVMNNMINFLGKAGRLDDGLKLFEE 360
Query: 93 LD-EFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + + V+Y ++ AL E K + F K G S Y++++ G
Sbjct: 361 MGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISP-----SPFTYSILIDG 415
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K + K EEMD++G +Y +D + K+ + A +L++E+K+
Sbjct: 416 FCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSS 475
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
Y +I+ +G + +D A+ ++ EM ++GC P+V N ++ L + EA +
Sbjct: 476 ARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMR 535
Query: 272 EMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+M + GC+PD+ +Y+ L K P + + M S I+P +Y +L G
Sbjct: 536 KMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAG 595
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ K+M LG D Y+++++A+
Sbjct: 596 MFEEAAELMKEMNALGFEYDLITYSSILEAI 626
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 124/276 (44%), Gaps = 19/276 (6%)
Query: 26 HFTHTTDTYNSVIDILGKFFEFD------LSWNLIHRMKDNPSSIPNHATFRIMFKRYVT 79
H TYN++I L FE SW RMK + S P+ T+ I+ +
Sbjct: 365 HCIPNVVTYNTIIKAL---FESKSRVSEVFSW--FERMKGSGIS-PSPFTYSILIDGFCK 418
Query: 80 AHLVNEAMGTFNKLDEFGLKD-EVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVE 138
+ + +AM ++DE G +YC+L+DAL + K A EL +N G S
Sbjct: 419 TNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSS--- 475
Query: 139 MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK 198
++Y ++++ K ++EM K G ++++Y+ M + ++ +A+
Sbjct: 476 ---ARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALT 532
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
++M++ G D+ +YN ++ + + G AM + M+ +P V+ NTV+ L
Sbjct: 533 TMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALS 592
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
G EA ++ EM G D+ITY + K
Sbjct: 593 HAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGK 628
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 149/326 (45%), Gaps = 22/326 (6%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQE 122
+PN T+ M Y +EA G + GL+ +++ +++ LC + E E
Sbjct: 15 LPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSE 74
Query: 123 LCFGENKNVGFSGLVEMNKTK------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
+ LVEM++ YN ++ G+ K + + EM + G+ +
Sbjct: 75 V------------LVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPN 122
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
+ +Y+ ++ MCK+G +A++ + +M +G+ + Y T+I +D A RV
Sbjct: 123 VVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLN 182
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR 296
EM G PS+VT N +I C GR+ EA +L +M KG +PDV++Y + +
Sbjct: 183 EMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQ 242
Query: 297 EILGLFD---RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
E+ F MI + P TY L++ L ++++M + PDEF Y
Sbjct: 243 ELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYT 302
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKG 379
L++A +G L+ A +EM KG
Sbjct: 303 TLINAYCKEGDLNKALHLHDEMIQKG 328
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 160/351 (45%), Gaps = 27/351 (7%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+P+ T+ + Y ++A+ ++ GL + V+Y +L++++C+ ++ A E
Sbjct: 85 VPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAME 144
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
F + +V GL +T Y I+ G+ + + EM + G + + +Y+
Sbjct: 145 --FFDQMHV--RGLCPNERT--YTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNA 198
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ C G+ +A+ L ++M KG+ DVV+Y+T+I ++ +D A ++ EM
Sbjct: 199 LINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKS 258
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---L 299
P VT +++I+ LCE R+ EA + EM PD TY K ++ L
Sbjct: 259 VLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKAL 318
Query: 300 GLFDRMIESGIRPKMDTYVMLLR--------KFGRWGFLR-------PVFVVWKKMEELG 344
L D MI+ G P TY +L+ K R L+ P V + + E
Sbjct: 319 HLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENC 378
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
C+ + + ALV KG++D A + E M K + KP E + ++ G
Sbjct: 379 CNIEFKSAVALVKGFCMKGLMDEADQVFESMINK--NHKPNEAIYNVIIHG 427
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 94/187 (50%), Gaps = 3/187 (1%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
++ +KEM++ G +VV YNT+I + D A R M G +P+++T N +I
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKP-REILGLFDRMIESGIRP 312
LC +GR++E VL EM +KG VPD +TY+ C E + L L M+ +G+ P
Sbjct: 62 GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
+ TY L+ + G L + +M G P+E Y +++ +G+LD A +
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181
Query: 373 EEMFAKG 379
EM G
Sbjct: 182 NEMTRSG 188
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 3/220 (1%)
Query: 164 FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
F++EM++ G + ++ +Y+ +D CK + +A + M KG++ +++ +N +I +
Sbjct: 5 FFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLC 64
Query: 224 VSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVI 283
+ V EM G P VT NT++ C+ G +A + AEM + G P+V+
Sbjct: 65 RDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVV 124
Query: 284 TYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
TY + K + + FD+M G+ P TY ++ F + G L + V +M
Sbjct: 125 TYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEM 184
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G P YNAL++ G ++ A ++M KG+
Sbjct: 185 TRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGV 224
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 157/362 (43%), Gaps = 26/362 (7%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++++ K F + L M N S PN T+ + A +N AM F++
Sbjct: 90 TYNTLVNGYCKEGNFHQALVLHAEMVRNGLS-PNVVTYTSLINSMCKAGNLNRAMEFFDQ 148
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ GL +E +Y +++ + + EA + E GF + YN ++ G
Sbjct: 149 MHVRGLCPNERTYTTIINGFAQQGLLDEAYRV-LNEMTRSGF-----IPSIVTYNALING 202
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + ++M +GV+ D+ SYS + ++ + +A ++ EM K + D
Sbjct: 203 HCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPD 262
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V Y+++I+ + + A +++EM + P T T+I C+ G + +A +
Sbjct: 263 AVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHD 322
Query: 272 EMPKKGCVPDVITYHCFFRCLEKP-------REILGLF-----------DRMIESGIRPK 313
EM +KG +PD +TY+ L K R +L LF + +IE+ +
Sbjct: 323 EMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIE 382
Query: 314 MDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDE 373
+ V L++ F G + V++ M P+E YN ++ G + A K +
Sbjct: 383 FKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYK 442
Query: 374 EM 375
EM
Sbjct: 443 EM 444
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 148/360 (41%), Gaps = 26/360 (7%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A + RA+EFF+ + TY ++I+ + D ++ +++ M + IP
Sbjct: 134 CKAGNLNRAMEFFDQMHVR-GLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRS-GFIP 191
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ + + + EA+G + G L D VSY ++ QEL
Sbjct: 192 SIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFAR------NQELD 245
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
V G + Y+ +++G + + + ++EM + D +Y+ +
Sbjct: 246 RAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLI 305
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ CK G KA+ L+ EM +KG D V YN +I + A R+ ++
Sbjct: 306 NAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSI 365
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDR 304
PS VT NT+I+ C N + A A++ KG + E +F+
Sbjct: 366 PSAVTYNTLIENCC-NIEFKSAVALVKGFCMKGLMD----------------EADQVFES 408
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
MI +P Y +++ R G + + ++K+M + P ALV AL +GM
Sbjct: 409 MINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGM 468
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Query: 272 EMPKKGCVPDVITYHCFFR--C-LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM + GC+P+V+TY+ C L++ E G M G+ P + T+ M++ R G
Sbjct: 8 EMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDG 67
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
L+ V +M G PDE YN LV+ +G A EM GLS
Sbjct: 68 RLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLS 120
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 164/356 (46%), Gaps = 11/356 (3%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T YNS+ID K + ++R+ P+ TF ++ + A V+
Sbjct: 88 TASAYNSLIDAFVKA-GYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKL 146
Query: 90 FNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
F ++ V +Y L+DA+C+ V +A ++ F + K+ G Y +
Sbjct: 147 FEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKV-FLDMKSRGCR-----PNIFTYTSM 200
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G K K +EEM G+V Y+ + + +SG+ A KL++EM KG+
Sbjct: 201 IDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGL 260
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ D V + +++ +GV+ A R+++E R++GC V N +I LC++ R+ EA+
Sbjct: 261 QPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWE 320
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ E+ + G VPDV T++ L K I L M +G P + Y L+
Sbjct: 321 IFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLR 380
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ G + + +M+ LG PD YN L+D G ++ A + EE+ AKG +
Sbjct: 381 KSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFA 436
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 177/405 (43%), Gaps = 46/405 (11%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A +FF WV T + +++++LG F+ + ++ ++ + I F +
Sbjct: 2 AYKFFKWVRTQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKS-RYILQPRIFIEL 60
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNVG 132
+ Y +A L+ +++ +++ S Y +L+DA + + +A + +G
Sbjct: 61 ARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKA----LAVYRVMG 116
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
SGL T +N+++ + K + +EEM + ++ +YSI +D +CK G
Sbjct: 117 QSGL--RPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGG 174
Query: 193 PWKAVKLYKEMKKKGIKMDV-----------------------------------VAYNT 217
KA+K++ +MK +G + ++ V YN+
Sbjct: 175 VEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNS 234
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
+I +G S D A +++REM G QP VT +++ L GR EA + E G
Sbjct: 235 LIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVG 294
Query: 278 CVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
C DV Y+ L K + E +F + E G+ P + T+ L+ + G + F
Sbjct: 295 CALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAF 354
Query: 335 VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++ M+ GC+PD YN L+D L G ++ A + EM + G
Sbjct: 355 ILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLG 399
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 150/305 (49%), Gaps = 16/305 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY S+ID LGK D ++ L M + + + + + + A F +
Sbjct: 196 TYTSMIDGLGKSGHVDKAFFLFEEMT-SEGLVATRVVYNSLIHGLGRSGRADAAAKLFRE 254
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ GL+ D V++ +LV L EA+ + F E ++VG + +++N +YN+++
Sbjct: 255 MLSKGLQPDHVTFTSLVYGLGVAGRASEARRI-FQEARDVGCA--LDVN---LYNVLIDT 308
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + E + E+++ G+V D+++++ MD +CKSG+ A L +MK+ G D
Sbjct: 309 LCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPD 368
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V YNT+I + S V+ A ++ EM+ +G +P VVT NT+I C+ GR+ +A +
Sbjct: 369 VTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFE 428
Query: 272 EMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRM----IESGIRPKMDTYVMLLRKF 324
E+ KG + +TY+ L + E LF+ M ++ I P TY LL
Sbjct: 429 EISAKG-FANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGA 487
Query: 325 GRWGF 329
+ G
Sbjct: 488 RQAGL 492
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 114/263 (43%), Gaps = 35/263 (13%)
Query: 141 KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
+ +I+ + RG+ K E + M+ +Y+ +D K+G KA+ +Y
Sbjct: 53 QPRIFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVY 112
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
+ M + G++ D +N ++ A ++ VD +++ EM+ C P+V+T + +I +C+
Sbjct: 113 RVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKC 172
Query: 261 GRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVML 320
G V +A V +M +GC RP + TY +
Sbjct: 173 GGVEKALKVFLDMKSRGC--------------------------------RPNIFTYTSM 200
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ G+ G + F ++++M G YN+L+ L G D A K EM +KGL
Sbjct: 201 IDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGL 260
Query: 381 SAKPREELGTKLVQG-GLDGEQS 402
+P T LV G G+ G S
Sbjct: 261 --QPDHVTFTSLVYGLGVAGRAS 281
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 123/239 (51%), Gaps = 3/239 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y ++L K S + + + +EM +G D+ +Y++ ++ +C+ G+ A++ K +
Sbjct: 198 YTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLP 257
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
G + + V+YN V++ + +E + A + EM + GC P+VVT N +I LC G V
Sbjct: 258 SYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVE 317
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
A VL ++PK GC P+ ++Y+ K +++ + D M+ G P + +Y LL
Sbjct: 318 PALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLL 377
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
R G + + ++++ GC+P +YN ++D L G A + EM +KGL
Sbjct: 378 TALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGL 436
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 159/336 (47%), Gaps = 12/336 (3%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQE 122
+P+ T+ I+ + +AM +++ + G D V+Y +V+ +C+ V +A E
Sbjct: 192 VPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIE 251
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
KN+ G E N T YN++L+G W E EM ++G ++ ++++
Sbjct: 252 FL----KNLPSYG-CEPN-TVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 305
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ +C+ G A+++ +++ K G + ++YN ++ A + +D AM M G
Sbjct: 306 LISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 365
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REIL 299
C P +V+ NT++ LC +G V A +L ++ KGC P +I+Y+ L K +E L
Sbjct: 366 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 425
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
L + M+ G++P + TY + R + + K++++G P+ YNA++ L
Sbjct: 426 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 485
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+ A M G P E T L++G
Sbjct: 486 CKRRETHSAIDLFAYMIGNG--CMPNESTYTILIEG 519
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 163/351 (46%), Gaps = 11/351 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +++ K + + L+ M+D P+ T+ ++ V++A+
Sbjct: 197 TYTILLEATCKRSGYKQAMKLLDEMRDK-GCTPDIVTYNVVVNGICQEGRVDDAIEFLKN 255
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
L +G + + VSY ++ LC + +A+EL GE G +NM++
Sbjct: 256 LPSYGCEPNTVSYNIVLKGLCTAERWEDAEEL-MGEMGQKGCP-----PNVVTFNMLISF 309
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ E E++ K G + SY+ + CK K KA+ M +G D
Sbjct: 310 LCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPD 369
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+V+YNT++ A+ S VD A+ + ++++ GC P +++ NTVI L + G+ +EA +L
Sbjct: 370 IVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLN 429
Query: 272 EMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM KG PD+ITY L ++ + + F ++ + GIRP Y ++ +
Sbjct: 430 EMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRR 489
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++ M GC P+E Y L++ L +G++ AR +E+ ++G
Sbjct: 490 ETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 118/241 (48%), Gaps = 12/241 (4%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G+ R + E R V +D ++ + +C G+ A+ + EM
Sbjct: 131 YNAMMAGYCGAGQVDAARRWCAE---RAVERDAYTCDTLIRGLCGRGRTANALAVLDEML 187
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
++ DVV Y ++ A G AM++ EMR+ GC P +VT N V+ +C+ GRV
Sbjct: 188 RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVD 247
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL------EKPREILGLFDRMIESGIRPKMDTYV 318
+A L +P GC P+ ++Y+ + L E E++G M + G P + T+
Sbjct: 248 DAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMG---EMGQKGCPPNVVTFN 304
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
ML+ R G + P V +++ + GCSP+ +YN L+ A + +D A + + M ++
Sbjct: 305 MLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 364
Query: 379 G 379
G
Sbjct: 365 G 365
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 118/239 (49%), Gaps = 3/239 (1%)
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
+ ++RG +EM +R V D+ +Y+I ++ CK +A+KL EM+
Sbjct: 164 DTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRD 223
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
KG D+V YN V+ + VD A+ + + GC+P+ V+ N V+K LC R +
Sbjct: 224 KGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWED 283
Query: 266 AYAVLAEMPKKGCVPDVITYHCF--FRCLEKPRE-ILGLFDRMIESGIRPKMDTYVMLLR 322
A ++ EM +KGC P+V+T++ F C + E L + +++ + G P +Y LL
Sbjct: 284 AEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLH 343
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
F + + M GC PD +YN L+ AL G +D+A + ++ KG +
Sbjct: 344 AFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCA 402
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 74/187 (39%), Gaps = 44/187 (23%)
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
+D A+R+ R +P TC +IK L +GR EA VLA C PDV+ Y+
Sbjct: 83 LDEALRLVGSAR----RPDAGTCAALIKKLSASGRTAEARRVLA-----ACGPDVMAYNA 133
Query: 288 FFR--------------CLEKPRE---------------------ILGLFDRMIESGIRP 312
C E+ E L + D M+ P
Sbjct: 134 MMAGYCGAGQVDAARRWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVP 193
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
+ TY +LL + + + +M + GC+PD YN +V+ + +G +D A ++
Sbjct: 194 DVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFL 253
Query: 373 EEMFAKG 379
+ + + G
Sbjct: 254 KNLPSYG 260
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 164/349 (46%), Gaps = 37/349 (10%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALC--------------- 112
+ I+ + H V+ + +K+ + GL+ V++ L++ LC
Sbjct: 99 SLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDM 158
Query: 113 ----------EYKHVIEAQELCFGENKNVGFSGLVEMNKTKI------YNMILRGWFKMS 156
Y +I + N+ +GF L +M K Y+ ++ G+
Sbjct: 159 LVRGLQPNVYTYNVIINSLSKSGKANEALGF--LKQMEKVGCVPNVVNYSTLIDGYCLRG 216
Query: 157 WWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
+ R ++ M +G ++++Y+ M+ CK + +AV+L E +KG+ D+V +
Sbjct: 217 QMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFT 276
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
T+I + + A +++R + G P+++T ++ LC++G + EA+A+ EM +
Sbjct: 277 TIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRS 336
Query: 277 GCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
P+++ Y L K +I LF R+I+ G++P + TY L+ + G +
Sbjct: 337 TVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEA 396
Query: 334 FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+++KMEE GC+PD+ AYN ++ + MAR+ EEM +G SA
Sbjct: 397 HKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSA 445
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 123/252 (48%), Gaps = 5/252 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+ +L G + +++M RG+ ++++Y++ ++ + KSGK +A+ K+M+
Sbjct: 135 FTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQME 194
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K G +VV Y+T+I + +D A V+ M GC P+V T +++ C+ R+
Sbjct: 195 KVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIE 254
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLL 321
EA +L E +KG VPD++T+ L +P LF + G P + TY +LL
Sbjct: 255 EAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLL 314
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ G L F ++++M+ P+ Y L+D+L G + ++ + +GL
Sbjct: 315 DGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGL- 373
Query: 382 AKPREELGTKLV 393
KP T LV
Sbjct: 374 -KPNVYTYTALV 384
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 107/225 (47%), Gaps = 7/225 (3%)
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
+K+++ I+R M + +E++ G+ +D+HS SI ++ C + + +
Sbjct: 66 SKLFSSIVR----MGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLS 121
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
++ K G++ +V + T++ + + +D M +Y +M G QP+V T N +I L ++G
Sbjct: 122 KILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSG 181
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYV 318
+ EA L +M K GCVP+V+ Y CL + E +FD M+ G P + TY
Sbjct: 182 KANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYT 241
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
L+ + + + + + G PD + ++ L G
Sbjct: 242 SLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAG 286
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 129/292 (44%), Gaps = 11/292 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN +I+ L K + + + + +M + +PN + + Y ++EA F+
Sbjct: 169 TYNVIINSLSKSGKANEALGFLKQM-EKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDL 227
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G V +Y +L++ C+ + + EA +L E G + + I+ G
Sbjct: 228 MVSKGCTPNVYTYTSLMNGYCKIERIEEAVQL-LDETLRKGL-----VPDIVTFTTIISG 281
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ ++ + + G ++ +Y + +D +CK G +A L++EM++ +K +
Sbjct: 282 LCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPN 341
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+V Y +I ++ + ++ + + G +P+V T ++ LC+ G + EA+ +
Sbjct: 342 LVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFR 401
Query: 272 EMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVML 320
+M + GC PD Y+ + + P L + M+ G T +L
Sbjct: 402 KMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALL 453
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 19/186 (10%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTD--TYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
C A A + F ++ C HT + TY ++D L K + ++ L M+ +
Sbjct: 283 CRAGRPLAAQQLFRYI---CAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVK 339
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQE 122
PN + I+ + + F++L + GLK V +Y LV ALC+ +IEA +
Sbjct: 340 -PNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHK 398
Query: 123 LCFGENKNVGFSGLVEMNKTK---IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
L F + E T YN+I++G+ + R+ EEM RG D +
Sbjct: 399 L---------FRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT 449
Query: 180 YSIYMD 185
++ D
Sbjct: 450 RALLND 455
>gi|297852926|ref|XP_002894344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340186|gb|EFH70603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 650
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 167/348 (47%), Gaps = 44/348 (12%)
Query: 11 WKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
+ A+ FN + T+ T YN+++ +L K D + + RM + PN T+
Sbjct: 286 YDEAVGLFNEMITE-GLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCR-PNEYTY 343
Query: 71 RIMF-------------------KRYVTAHLVNEAMGTFNKLD-------------EFGL 98
++ KRY+T + + + T +KL F +
Sbjct: 344 SLVLNLLVAEGQLVRLDGIVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPV 403
Query: 99 KDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSW 157
K E SY +++++LC IEA E+ + G+V T +YN + K+
Sbjct: 404 KGERDSYMSMLESLCGAGKTIEAIEML----SKIHEKGVV--TDTMMYNTVFSALGKLKQ 457
Query: 158 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
+ +E+M K G D+ +Y+I + + G+ +A+ +++E+++ K D+++YN+
Sbjct: 458 ISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEVDEAINIFEELERSDCKPDIISYNS 517
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
+I +G + VD A ++EM+E G P VVT +T+++ + RV AY++ EM KG
Sbjct: 518 LINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKG 577
Query: 278 CVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLR 322
C P+++TY+ CLEK E + L+ +M + G+ P TY +L R
Sbjct: 578 CQPNIVTYNILLDCLEKSGRTAEAVDLYTKMKQQGLTPDSITYTVLER 625
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 175/377 (46%), Gaps = 22/377 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+Y +I +G+ ++D + L + M ++ N + + + +V++A+ F++
Sbjct: 272 SYTIMIRTMGRIGKYDEAVGLFNEMITEGLTL-NVVGYNTLMQVLAKGKMVDKAIQVFSR 330
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK----TKIYNM 147
+ E G + +E +Y +++ L E + V G+VE++K IY+
Sbjct: 331 MVETGCRPNEYTYSLVLN-------------LLVAEGQLVRLDGIVEISKRYMTQGIYSY 377
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++R K+ + + +M V + SY ++ +C +GK +A+++ ++ +KG
Sbjct: 378 LVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKG 437
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ D + YNTV A+G + + ++ +M++ G P + T N +I G V EA
Sbjct: 438 VVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEVDEAI 497
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKPREILGL---FDRMIESGIRPKMDTYVMLLRKF 324
+ E+ + C PD+I+Y+ CL K ++ F M E G+ P + TY L+ F
Sbjct: 498 NIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECF 557
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
G+ + + ++++M GC P+ YN L+D L G A +M +GL+
Sbjct: 558 GKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKSGRTAEAVDLYTKMKQQGLTPDS 617
Query: 385 REELGTKLVQGGLDGEQ 401
+ +Q G G+
Sbjct: 618 ITYTVLERLQSGSHGKS 634
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 138/307 (44%), Gaps = 73/307 (23%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YNM+L K K + +E+M KR +D +SY+I + M + GK +AV L+ EM
Sbjct: 241 YNMLLDALAKDE---KACQVFEDMKKRHCRRDEYSYTIMIRTMGRIGKYDEAVGLFNEMI 297
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR-- 262
+G+ ++VV YNT+++ + + VD A++V+ M E GC+P+ T + V+ LL G+
Sbjct: 298 TEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLVLNLLVAEGQLV 357
Query: 263 ------------------------------VREAYAVLAEM---PKKG------------ 277
V EA+ + +M P KG
Sbjct: 358 RLDGIVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESL 417
Query: 278 --------------------CVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKM 314
V D + Y+ F L K ++I LF++M + G P +
Sbjct: 418 CGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDI 477
Query: 315 DTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
TY +L+ FGR G + +++++E C PD +YN+L++ L G +D A +E
Sbjct: 478 FTYNILISSFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKE 537
Query: 375 MFAKGLS 381
M KGL+
Sbjct: 538 MQEKGLN 544
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 106/224 (47%), Gaps = 11/224 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMK-DNPSSI 64
C A A+E + + T T YN+V LGK + +L +MK D PS
Sbjct: 418 CGAGKTIEAIEMLSKIHEKGVVTDTM-MYNTVFSALGKLKQISHIHDLFEKMKKDGPS-- 474
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ I+ + V+EA+ F +L+ K D +SY +L++ L + V EA +
Sbjct: 475 PDIFTYNILISSFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAH-V 533
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F E + G + V Y+ ++ + K +EEM +G ++ +Y+I
Sbjct: 534 RFKEMQEKGLNPDV-----VTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNIL 588
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
+D + KSG+ +AV LY +MK++G+ D + Y + R S G
Sbjct: 589 LDCLEKSGRTAEAVDLYTKMKQQGLTPDSITYTVLERLQSGSHG 632
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 79/153 (51%), Gaps = 6/153 (3%)
Query: 172 GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFA 231
G+ + +Y + +S KA +Y E+++ G K+D+ AYN ++ A+ E A
Sbjct: 198 GLKMNSFTYKCLLQAYLRSRDSSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEK---A 254
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC 291
+V+ +M++ C+ + +I+ + G+ EA + EM +G +V+ Y+ +
Sbjct: 255 CQVFEDMKKRHCRRDEYSYTIMIRTMGRIGKYDEAVGLFNEMITEGLTLNVVGYNTLMQV 314
Query: 292 LEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
L K + + + +F RM+E+G RP TY ++L
Sbjct: 315 LAKGKMVDKAIQVFSRMVETGCRPNEYTYSLVL 347
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 78/185 (42%), Gaps = 5/185 (2%)
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
M K + ++ N +I G +E + +R+ +++ G + + T +++ +
Sbjct: 161 SMVKSNVHGNISTVNILIGFFGDTEDLQMCLRL---VKKWGLKMNSFTYKCLLQAYLRSR 217
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLL 321
+A+ V E+ + G D+ Y+ L K + +F+ M + R +Y +++
Sbjct: 218 DSSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKKRHCRRDEYSYTIMI 277
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
R GR G ++ +M G + + YN L+ L M+D A + M G
Sbjct: 278 RTMGRIGKYDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETG-- 335
Query: 382 AKPRE 386
+P E
Sbjct: 336 CRPNE 340
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 149/314 (47%), Gaps = 9/314 (2%)
Query: 85 EAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI 144
+A F++L G+ D SY L++ LC+ EA EL + G
Sbjct: 35 DARHVFDELLRRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCP----PDVVS 90
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y+ ++ G+FK K + EM + + ++ +Y+ + +CK+ KA+++ M
Sbjct: 91 YSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMV 150
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K G+ D + YN+++ S A+ ++MR G +P VVT N+++ LC+NGR
Sbjct: 151 KSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCT 210
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLL 321
EA + M K+G P++ TY + E+ GL D M+ +GI P + +L+
Sbjct: 211 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILV 270
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ + + +V+ KM + G +P+ Y A++ L G ++ A Y E+M +GLS
Sbjct: 271 CAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 330
Query: 382 AKPREELGTKLVQG 395
P + L+ G
Sbjct: 331 --PGNIVYNSLIHG 342
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 154/320 (48%), Gaps = 10/320 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PNH F I+ Y V EAM F+K+ + GL + V+Y ++ LC+ V +A L
Sbjct: 261 PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM-L 319
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + + G S +YN ++ G + W + E EM RG+ + ++
Sbjct: 320 YFEQMIDEGLSP-----GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 374
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D CK G+ ++ KL+ M + G+K D++ Y+T+I ++ +D A ++ M +G
Sbjct: 375 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 434
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG--- 300
+P VT +T+I C+ R+++A + EM G PD+ITY+ + L + R
Sbjct: 435 KPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKE 494
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L+ + +SG + ++ TY ++L + +++ + + + +N ++DAL+
Sbjct: 495 LYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALL 554
Query: 361 DKGMLDMARKYDEEMFAKGL 380
G D A+ + GL
Sbjct: 555 KVGRNDEAKDLFVAFSSNGL 574
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 169/389 (43%), Gaps = 54/389 (13%)
Query: 50 SWNLIHRMKDNPSSIP-NHATFRIMFKRYVTAHLVNEAMGTFNK-LDEFGLKDEVSYCNL 107
+ L+H M D+ P + ++ + + +++ T+N+ LD+ + V+Y ++
Sbjct: 70 ALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSI 129
Query: 108 VDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEE 167
+ ALC+ + V +A E+ K SG+ M YN I+ G+ + F ++
Sbjct: 130 IAALCKAQTVDKAMEVLTTMVK----SGV--MPDCMTYNSIVHGFCSSGQPKEAIVFLKK 183
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIR------- 220
M GV D+ +Y+ MD +CK+G+ +A K++ M K+G+K ++ Y T+++
Sbjct: 184 MRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 243
Query: 221 ----------------------------AVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
A E V+ AM V+ +MR+ G P+ VT
Sbjct: 244 LVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGA 303
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL------EKPREILGLFDRMI 306
VI +LC++GRV +A +M +G P I Y+ L E+ E L M+
Sbjct: 304 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEE---LILEML 360
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
+ GI + ++ + G + ++ M +G PD Y+ L+D G +D
Sbjct: 361 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 420
Query: 367 MARKYDEEMFAKGLSAKPREELGTKLVQG 395
A K M + G+ KP + L+ G
Sbjct: 421 EATKLLASMVSVGM--KPDCVTYSTLING 447
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 154/368 (41%), Gaps = 47/368 (12%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YNS+I L +++ + LI M D + N F + + V E+ F+ +
Sbjct: 336 YNSLIHGLCTCNKWERAEELILEMLDRGICL-NTIFFNSIIDSHCKEGRVIESEKLFDLM 394
Query: 94 DEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
G+K D ++Y L+D C + EA +L +VG Y+ ++ G+
Sbjct: 395 VRIGVKPDIITYSTLIDGYCLAGKMDEATKL-LASMVSVGMKP-----DCVTYSTLINGY 448
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K+S + EM+ GV D+ +Y+I + + ++ + A +LY + K G ++++
Sbjct: 449 CKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLEL 508
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
YN ++ + ++ D A+R+++ + M + T N +I L + GR EA +
Sbjct: 509 STYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 568
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
G VP+ TY + + +I G+ ++D
Sbjct: 569 FSSNGLVPNYWTYRL-------------MAENIIGQGLLEELDQ---------------- 599
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY----DEEMFAKGLSAKPREEL 388
++ ME+ GC+ D N +V L+ +G + A Y DE+ F+ S L
Sbjct: 600 ---LFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTA---SL 653
Query: 389 GTKLVQGG 396
L+ GG
Sbjct: 654 FIDLLSGG 661
>gi|302767746|ref|XP_002967293.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
gi|300165284|gb|EFJ31892.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
Length = 321
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 140/287 (48%), Gaps = 9/287 (3%)
Query: 102 VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKC 161
V++ LVD LC+ + +A EL + F + ++N I+ K +
Sbjct: 11 VTFGILVDGLCKANRLTDAFELVEVMGERGCFPNAL------VFNGIMDALCKEGRSAEA 64
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
F E M GV + +Y++ +D CK K +A+++ +EM +G + + V YNT +
Sbjct: 65 YGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHG 124
Query: 222 VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
+ VD A+ ++R M E + V T+I LC+ G++ EAY++L EM GCVP
Sbjct: 125 LCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPK 184
Query: 282 VITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWK 338
Y+ L + E LF RM SGI P T+ M++ + R + ++ +
Sbjct: 185 PGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQ 244
Query: 339 KMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
+M+ G +P E YN L+DAL G + A + +EM ++GLS R
Sbjct: 245 QMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSR 291
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 76/185 (41%), Gaps = 3/185 (1%)
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M +KG VV + ++ + + + A + M E GC P+ + N ++ LC+ GR
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGR 60
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVM 319
EAY + M G P ++TY+ EK L + M G P TY
Sbjct: 61 SAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L ++G + +++ M E D + Y L+D L G L A +EM G
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180
Query: 380 LSAKP 384
KP
Sbjct: 181 CVPKP 185
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 166/332 (50%), Gaps = 17/332 (5%)
Query: 52 NLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDA 110
+L+ M N S PN+ F I+ Y +++EAM F+++ + GL D V+Y L+DA
Sbjct: 430 DLLDLMVANGIS-PNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDA 488
Query: 111 LCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDK 170
LC+ V +A L F + N G + + ++N ++ G + W K E + EM
Sbjct: 489 LCKLGRVDDAV-LKFNQMINDGVTP-----NSVVFNSLVYGLCTVDRWEKAEELFFEMWD 542
Query: 171 RGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF 230
+GV ++ ++ M +C G+ A +L M++ G++ +V++YNT+I ++ D
Sbjct: 543 QGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDE 602
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR 290
A ++ M +G +P +++ +T+++ C+ GR+ AY + EM +KG P +TY +
Sbjct: 603 AAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQ 662
Query: 291 CLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
L R E L+ MI+SG + + TY ++L + + F +++ + P
Sbjct: 663 GLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRP 722
Query: 348 DEFAYNALVDALIDKGMLDMARKYDE-EMFAK 378
+ + ++D L G RK D ++FA
Sbjct: 723 NIITFTIMIDVLFKGG-----RKKDAMDLFAS 749
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 150/356 (42%), Gaps = 43/356 (12%)
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTF-NKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQEL 123
N + A V+EAM ++ EFG V CN L+ LC K V EA EL
Sbjct: 124 NEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALEL 183
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
++ G G N YN I+ G K + + M +GV D+ +YS
Sbjct: 184 LHTMAEDGG--GNCTPNVVT-YNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTI 240
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D +CK+ +A + + M KG+K DVV YNT+I + ++ VD A V + M + G
Sbjct: 241 IDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGV 300
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF-------------R 290
+P VVT NT+I LC+ V A VL M K PD+ TY+C R
Sbjct: 301 KPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVR 360
Query: 291 CLE-------------------------KPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
LE K E +F MI GI+P + Y +LL +
Sbjct: 361 RLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYA 420
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G + + + M G SP+ + +N ++ A K M+D A M GLS
Sbjct: 421 ARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLS 476
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 157/352 (44%), Gaps = 14/352 (3%)
Query: 50 SWNLIHRMKDNP--SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCN 106
+ L+H M ++ + PN T+ + A V+ A G + + G+K D V+Y
Sbjct: 180 ALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYST 239
Query: 107 LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE 166
++D LC+ + V A+ G +++ G+ YN I+ G K + +
Sbjct: 240 IIDGLCKAQAVDRAE----GVLQHMIDKGVKP--DVVTYNTIIDGLCKAQAVDRAEGVLQ 293
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
M +GV D+ +Y+ +D +CK+ +A + + M K +K D+ YN +I +
Sbjct: 294 HMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTG 353
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
+R EM G P VVT + ++ LC+NG+ EA + M +KG P+V Y
Sbjct: 354 EWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYG 413
Query: 287 CF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
+ ++ L D M+ +GI P + ++L + + + ++ +M +
Sbjct: 414 ILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQH 473
Query: 344 GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
G SPD Y L+DAL G +D A +M G++ P + LV G
Sbjct: 474 GLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVT--PNSVVFNSLVYG 523
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 170/380 (44%), Gaps = 34/380 (8%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++ID L K D + ++ M D P+ T+ + Y++ E + +
Sbjct: 306 TYNTIIDGLCKAQAVDRADGVLQHMIDKDVK-PDIQTYNCLIHGYLSTGEWKEVVRRLEE 364
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCF-----GENKNVGFSGLVEMN------ 140
+ GL D V+Y L+D LC+ EA+++ + G NV G++
Sbjct: 365 MYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGA 424
Query: 141 ------------------KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
I+N++L + K + + + M + G+ D+ +Y I
Sbjct: 425 IADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGI 484
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D +CK G+ AV + +M G+ + V +N+++ + + + A ++ EM + G
Sbjct: 485 LIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQG 544
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF--RCLE-KPREIL 299
+P+VV NT++ LC G+V A ++ M + G P+VI+Y+ CL + E
Sbjct: 545 VRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAA 604
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
L D M+ G++P + +Y LLR + + G + + ++++M G +P Y+ ++ L
Sbjct: 605 QLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGL 664
Query: 360 IDKGMLDMARKYDEEMFAKG 379
A++ M G
Sbjct: 665 FHTRRFSEAKELYLNMIKSG 684
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 181/452 (40%), Gaps = 79/452 (17%)
Query: 6 CYANDWKRALEFFNWVETDC--HFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
C + ALE + + D + T TYN++ID L K D + ++ M D
Sbjct: 172 CNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVK 231
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQ- 121
+ + T+ + A V+ A G + + G+K D V+Y ++D LC+ + V A+
Sbjct: 232 L-DVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEG 290
Query: 122 ----------------------ELCFGENKNVGFSGLVEM------NKTKIYNMILRGWF 153
LC + + L M + YN ++ G+
Sbjct: 291 VLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYL 350
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
W + EEM RG+ D+ +YS+ +D +CK+GK +A K++ M +KGIK +V
Sbjct: 351 STGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVT 410
Query: 214 AYNTVIR-------------------AVGVSEG----------------VDFAMRVYREM 238
Y ++ A G+S +D AM ++ M
Sbjct: 411 IYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRM 470
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL------ 292
+ G P VVT +I LC+ GRV +A +M G P+ + ++ L
Sbjct: 471 SQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRW 530
Query: 293 EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
EK E LF M + G+RP + + ++ G + + ME +G P+ +Y
Sbjct: 531 EKAEE---LFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISY 587
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
N L+ G D A + + M + GL KP
Sbjct: 588 NTLIGGHCLAGRTDEAAQLLDVMVSVGL--KP 617
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 173/440 (39%), Gaps = 89/440 (20%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+++ID L K D + ++ M D P+ T+ + A V+ A G
Sbjct: 236 TYSTIIDGLCKAQAVDRAEGVLQHMIDKGVK-PDVVTYNTIIDGLCKAQAVDRAEGVLQH 294
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIYNMI 148
+ + G+K D V+Y ++D LC+ + V A + +++ + + YN +
Sbjct: 295 MIDKGVKPDVVTYNTIIDGLCKAQAVDRADGV---------LQHMIDKDVKPDIQTYNCL 345
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G+ W + EEM RG+ D+ +YS+ +D +CK+GK +A K++ M +KGI
Sbjct: 346 IHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGI 405
Query: 209 KMDVVAYNTVIR-------------------AVGVSEG----------------VDFAMR 233
K +V Y ++ A G+S +D AM
Sbjct: 406 KPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMH 465
Query: 234 VYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL- 292
++ M + G P VVT +I LC+ GRV +A +M G P+ + ++ L
Sbjct: 466 IFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLC 525
Query: 293 -----EKPREIL--------------------------------GLFDRMIESGIRPKMD 315
EK E+ L D M G+RP +
Sbjct: 526 TVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVI 585
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
+Y L+ G + M +G PD +Y+ L+ G +D A EM
Sbjct: 586 SYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREM 645
Query: 376 FAKGLSAKPREELGTKLVQG 395
KG++ P + ++QG
Sbjct: 646 LRKGVT--PGAVTYSTILQG 663
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 107/219 (48%), Gaps = 9/219 (4%)
Query: 173 VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM 232
V DL +YSI C+ G+ + + K G +++ V N ++ + ++ VD AM
Sbjct: 86 VRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAM 145
Query: 233 RV-YREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG---CVPDVITYHCF 288
+ R M E GC P+VV+CNT++K LC RV EA +L M + G C P+V+TY+
Sbjct: 146 DILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTI 205
Query: 289 FRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
L K + + G+ MI+ G++ + TY ++ + + V + M + G
Sbjct: 206 IDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGV 265
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
PD YN ++D L +D A + M KG+ KP
Sbjct: 266 KPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGV--KP 302
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 137/307 (44%), Gaps = 46/307 (14%)
Query: 72 IMFKRYVTAHLVNE-----AMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCF 125
++F + +L NE A + ++ G++ V SY L+ C EA +L
Sbjct: 549 VVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQL-L 607
Query: 126 GENKNVGF-SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+VG L+ Y+ +LRG+ K + EM ++GV +YS +
Sbjct: 608 DVMVSVGLKPDLIS------YDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTIL 661
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ + + +A +LY M K G + D+ YN ++ + + VD A ++++ + +
Sbjct: 662 QGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLR 721
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDR 304
P+++T +I +L + GR ++A + A +P G VP+V+TY C+ +
Sbjct: 722 PNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTY-----CI--------MMKN 768
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
+I+ G+ + D ++ ME+ GC+PD NA++ +L+ +G
Sbjct: 769 IIQEGLLDEFDN-------------------LFLAMEKSGCTPDSVMLNAIIRSLLGRGE 809
Query: 365 LDMARKY 371
+ A Y
Sbjct: 810 IMRAGAY 816
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 101/211 (47%), Gaps = 9/211 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKD-EVSYCNLVDALCEYKHVIEAQEL 123
P+ ++ + + Y ++ A F ++ G+ V+Y ++ L + EA+EL
Sbjct: 617 PDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKEL 676
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
N+ SG + YN+IL G K + + + ++ + + + ++ +++I
Sbjct: 677 YL----NMIKSG--QQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIM 730
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG-VDFAMRVYREMREMG 242
+D++ K G+ A+ L+ + G+ +VV Y +++ + + EG +D ++ M + G
Sbjct: 731 IDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNI-IQEGLLDEFDNLFLAMEKSG 789
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
C P V N +I+ L G + A A L+++
Sbjct: 790 CTPDSVMLNAIIRSLLGRGEIMRAGAYLSKI 820
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 178/361 (49%), Gaps = 19/361 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIH-RMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
+++S+I +L + L L+H R + +P++ + I+ + +++A+ +
Sbjct: 399 SFSSLIGVLAR--NGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRD 456
Query: 92 KLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK---IYNM 147
++ G D V+Y ++ LC+ K +A L F+ +VE +
Sbjct: 457 EMLARGCFMDVVTYNTFLNGLCKKKMFADADML---------FNEMVERGMVPDFYTFTT 507
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++RG+ K K +E M + + D +Y+ +D CK+G+ +A +L+ +M +K
Sbjct: 508 LIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD 567
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
I D ++Y TV+ S + A+ + +M E G +P++VTCNT+IK C +G + +AY
Sbjct: 568 IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAY 627
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKF 324
L++M G +PD +Y+ K + L + M + G++ + TY ++L F
Sbjct: 628 EYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGF 687
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
G ++ V +KM E+G +PD Y++L++ + + + A ++ +EM +GL
Sbjct: 688 CAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDD 747
Query: 385 R 385
R
Sbjct: 748 R 748
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 152/332 (45%), Gaps = 12/332 (3%)
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFG 126
T+ + Y LV EA N G++ + +Y ++ LC+ A+++
Sbjct: 293 VTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLI- 351
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
E +G + YN +L + + +E ++EM +RGV+ DL S+S + +
Sbjct: 352 EMLQLGLTP-----NAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGV 406
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+ ++G ++A+ ++EM++ GI D V Y +I + + A+++ EM GC
Sbjct: 407 LARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMD 466
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFD 303
VVT NT + LC+ +A + EM ++G VPD T+ R K + L LF+
Sbjct: 467 VVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFE 526
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
M+ + ++P TY L+ F + G + +W M PD +Y +++ G
Sbjct: 527 AMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSG 586
Query: 364 MLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+L A ++M KG+ +P L++G
Sbjct: 587 LLPEALNLCDQMLEKGI--RPNLVTCNTLIKG 616
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 114/237 (48%), Gaps = 3/237 (1%)
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N +L G + W E + E+ + G+ ++++ +I ++ +CK K + +M+
Sbjct: 226 NKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG 285
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
KG+ D+V YNT+I A V+ A ++ G +P ++T N ++ LC+ G+
Sbjct: 286 KGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDR 345
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLR 322
A VL EM + G P+ TY+ + + IL +FD M G+ P + ++ L+
Sbjct: 346 AKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIG 405
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R G L + +++ME G PD Y L+D G L A K +EM A+G
Sbjct: 406 VLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARG 462
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 172/396 (43%), Gaps = 36/396 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN+++ L K ++D + +++ M PN AT+ + + EA F++
Sbjct: 329 TYNAILYGLCKIGKYDRAKDVLIEMLQ-LGLTPNAATYNTLLVEICRRDNILEAQEIFDE 387
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEA-------------------QELCFGENKNVG 132
+ G L D VS+ +L+ L H+ +A L G +N
Sbjct: 388 MSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGA 447
Query: 133 FSGLVEMNKTKI----------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
S ++M + YN L G K + + EM +RG+V D ++++
Sbjct: 448 LSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTT 507
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ CK G KA+ L++ M + +K D V YNT+I + + A ++ +M
Sbjct: 508 LIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD 567
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLF 302
P ++ TV+ C +G + EA + +M +KG P+++T + + + ++ +
Sbjct: 568 IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAY 627
Query: 303 D---RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ +MI +GI P +Y L+ + + L F++ +ME+ G + YN +++
Sbjct: 628 EYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGF 687
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+G + A + +M G++ P + L+ G
Sbjct: 688 CAEGKMQEAEQVLRKMIEIGIN--PDGATYSSLING 721
>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
Length = 676
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 173/386 (44%), Gaps = 34/386 (8%)
Query: 1 RETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWN----LIHR 56
R L C ++ + AL FFNWV+ D +T Y ++ L F + L+
Sbjct: 150 RVLLRCQSDSFT-ALSFFNWVKNDLGLRPSTQNYCIIVHTLAWSRNFSQAIKFLCELVEL 208
Query: 57 MKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKH 116
+KD+ +P F+ + L E D V + LV A
Sbjct: 209 VKDD---LPGEDVFKNLI-------LCTEDCNW----------DPVVFDMLVKAYLRMGR 248
Query: 117 VIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
V E F VGF V + N +L G K+++ +C E +EEM++ G+ +
Sbjct: 249 VREGLR-SFRRMLRVGFVPTVITS-----NYLLNGLLKLNYTDRCWEVYEEMERFGIAPN 302
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
L++++I ++CK G K K ++M+++G D+V YNT+I + +D A +Y+
Sbjct: 303 LYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYK 362
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE- 293
M G P +V+ ++ LC+ GRVREA+ + M +G PD++TY+ C E
Sbjct: 363 IMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEG 422
Query: 294 KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
K +E L MI +GI P T +L+ +G+ G + +++ G S + Y+
Sbjct: 423 KMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYS 482
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKG 379
L+ AL + A+ E M G
Sbjct: 483 YLIVALCRENRPFAAKNLLERMSQDG 508
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 3/196 (1%)
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
+ G+ + ++ ++ M + G V+ N ++ + D VY EM G P++
Sbjct: 245 RMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLY 304
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL-EKPR--EILGLFDRM 305
T N + +LC++G + L +M ++G PD++TY+ K R + L+ M
Sbjct: 305 TFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIM 364
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
G+ P + +Y L+ + G +R ++ +M G SPD YN L+ +G +
Sbjct: 365 YRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKM 424
Query: 366 DMARKYDEEMFAKGLS 381
+R +M G+S
Sbjct: 425 QESRSLLHDMIWNGIS 440
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 109/249 (43%), Gaps = 32/249 (12%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ + Y +++A + + G+ D VSY L++ LC+ V EA +L
Sbjct: 336 PDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQL 395
Query: 124 CFGENKNVGFS----------------GLVEMNKTKIYNMILRG--------WFKMSWWG 159
F + G S G ++ +++ +++MI G W + +G
Sbjct: 396 -FHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYG 454
Query: 160 KCREFWE------EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
K +F E+ + GV YS + +C+ +P+ A L + M + G K ++
Sbjct: 455 KEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELE 514
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
YN +I++ + + A+ + EM + +P++ T VJ L R E +++ EM
Sbjct: 515 IYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEM 574
Query: 274 PKKGCVPDV 282
G +PD+
Sbjct: 575 VASGXLPDL 583
>gi|115451461|ref|NP_001049331.1| Os03g0208600 [Oryza sativa Japonica Group]
gi|26006498|gb|AAN77307.1| Hypothetical protein [Oryza sativa Japonica Group]
gi|108706773|gb|ABF94568.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547802|dbj|BAF11245.1| Os03g0208600 [Oryza sativa Japonica Group]
Length = 531
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 163/357 (45%), Gaps = 26/357 (7%)
Query: 35 NSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR---IMFKRYVTAHLVNEAMGTFN 91
++ + +LG+ F W+L ++ + +P+ T R ++ R V E + +F
Sbjct: 114 DTALYVLGRARRFAHMWDL---LRSSRRLVPDAVTPRTAMVVLGRVAKVCSVRETVDSFR 170
Query: 92 KLDEF--GLKDEVS---YCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN-KTKIY 145
+L G D+ + L+ LC+ K + +A +NV + E + +
Sbjct: 171 RLSRMLRGRGDDQEGQLFNALLRTLCQEKSMSDA--------RNVYHALKYEFKVNRQTF 222
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N++L GW F EM + GV DL +Y+ +D CK+ A KL EM++
Sbjct: 223 NILLSGWKSAE---DAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMRE 279
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
K I DV+ Y ++I +G+ D A + +EM E+GC P V NT I+ R+ +
Sbjct: 280 KDISPDVITYTSLIGGLGLIGQPDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGD 339
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLR 322
A+A++ EM KG +P+ TY+ FFRC +I L++RM G P + + ++R
Sbjct: 340 AFALMEEMASKGLMPNATTYNLFFRCYYWAYDIGSAWQLYERMRSEGCFPNTQSCMFIVR 399
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R G + +W M G + L D L D+G LD A + +M G
Sbjct: 400 LCHRHGRVAQALELWSDMVNNGFGSFTLVSDVLFDLLCDEGKLDEAERCFHQMIELG 456
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 7/186 (3%)
Query: 198 KLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLL 257
+L + ++ +G + +N ++R + + + A VY ++ V T LL
Sbjct: 171 RLSRMLRGRGDDQEGQLFNALLRTLCQEKSMSDARNVYHALK----YEFKVNRQTFNILL 226
Query: 258 CENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKM 314
+A A +AEM + G PD++TY+ C K R + L D M E I P +
Sbjct: 227 SGWKSAEDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDISPDV 286
Query: 315 DTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
TY L+ G G + K+M ELGC PD AYN + + L A EE
Sbjct: 287 ITYTSLIGGLGLIGQPDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEE 346
Query: 375 MFAKGL 380
M +KGL
Sbjct: 347 MASKGL 352
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 101/262 (38%), Gaps = 57/262 (21%)
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N TF I+ + +A +A ++ E G++ D V+Y +L+D C+ + V A +L
Sbjct: 218 NRQTFNILLSGWKSAE---DAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKL- 273
Query: 125 FGENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
L EM + I Y ++ G + K + +EM + G D+
Sbjct: 274 -----------LDEMREKDISPDVITYTSLIGGLGLIGQPDKAKHLLKEMHELGCYPDVP 322
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+Y+ + + + A L +EM KG+ + YN R + + A ++Y M
Sbjct: 323 AYNTAIRNFVIAKRLGDAFALMEEMASKGLMPNATTYNLFFRCYYWAYDIGSAWQLYERM 382
Query: 239 REMGCQPSVVTCNTVIKL-----------------------------------LCENGRV 263
R GC P+ +C +++L LC+ G++
Sbjct: 383 RSEGCFPNTQSCMFIVRLCHRHGRVAQALELWSDMVNNGFGSFTLVSDVLFDLLCDEGKL 442
Query: 264 REAYAVLAEMPKKGCVPDVITY 285
EA +M + G P + +
Sbjct: 443 DEAERCFHQMIELGQKPSNVAF 464
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 116/282 (41%), Gaps = 14/282 (4%)
Query: 1 RETLSCYANDWKRALEFFNWVETDCHFTHTTD--TYNSVIDILGKFFEFDLSWNLIHRMK 58
R+T + + WK A + +V D TYNS+ID K + ++ L+ M+
Sbjct: 219 RQTFNILLSGWKSAEDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMR 278
Query: 59 DNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVI 118
+ S P+ T+ + ++A ++ E G +V N ++ +
Sbjct: 279 EKDIS-PDVITYTSLIGGLGLIGQPDKAKHLLKEMHELGCYPDVPAYNTA-----IRNFV 332
Query: 119 EAQEL--CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
A+ L F + + GL M YN+ R ++ G + +E M G +
Sbjct: 333 IAKRLGDAFALMEEMASKGL--MPNATTYNLFFRCYYWAYDIGSAWQLYERMRSEGCFPN 390
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
S + + + G+ +A++L+ +M G + + + + +D A R +
Sbjct: 391 TQSCMFIVRLCHRHGRVAQALELWSDMVNNGFGSFTLVSDVLFDLLCDEGKLDEAERCFH 450
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL-AEMPKKG 277
+M E+G +PS V IK+L + E+ A L A+M + G
Sbjct: 451 QMIELGQKPSNVAFRR-IKILMQLANREESIARLTAQMAQFG 491
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 156/320 (48%), Gaps = 19/320 (5%)
Query: 52 NLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDA 110
+L++ M +N S P+H F I+F Y +++EAM FNK+ + GL D V+Y L+DA
Sbjct: 364 DLLNLMVENGLS-PDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDA 422
Query: 111 LCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDK 170
LC+ V +A L F + N G + ++N ++ G + W K +EF+ EM
Sbjct: 423 LCKLGRVDDAV-LKFNQMMNEGVAP-----NIFVFNSLVYGLCTVDKWEKAKEFYFEMLN 476
Query: 171 RGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF 230
+G+ D+ ++ + +C G+ KA +L M++ G + V++Y T+I + +D
Sbjct: 477 QGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDE 536
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR 290
A + M +G +P T NT++ C GR+ +AY V EM + G P V+TY
Sbjct: 537 AAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILH 596
Query: 291 CLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
L R E L+ MI SG + + Y ++L + + F +++ + CS
Sbjct: 597 GLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSL----CSK 652
Query: 348 D----EFAYNALVDALIDKG 363
D +N ++ AL G
Sbjct: 653 DFQLEITTFNIMIGALFKSG 672
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 143/321 (44%), Gaps = 8/321 (2%)
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNK-LDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL 123
N+ + K A + EAM K + E G D VSY L+ C K EA EL
Sbjct: 128 NNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALEL 187
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ G S + Y +++ G+F K + EM RG+ ++ +Y+
Sbjct: 188 LHMMADSQGRSCPPNVVS---YAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTV 244
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D +CK+ +A ++++M KG+K D YN +I +R+ EM G
Sbjct: 245 IDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGL 304
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILG 300
+P T +++ LC NGR REA + M +KG P+V Y E+
Sbjct: 305 KPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHD 364
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L + M+E+G+ P + ++ + + + ++ KM++ G SPD Y AL+DAL
Sbjct: 365 LLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALC 424
Query: 361 DKGMLDMARKYDEEMFAKGLS 381
G +D A +M +G++
Sbjct: 425 KLGRVDDAVLKFNQMMNEGVA 445
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 165/383 (43%), Gaps = 20/383 (5%)
Query: 14 ALEFFNWVETDCH------FTHTTDTYNSVIDILGKFFEFDLSWNLIHRM--KDNPSSIP 65
AL+ F+ + T F H + V E +L +L +RM + P
Sbjct: 33 ALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVTP 92
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ I+ + + TF + + G + + + L+ LC+ K + EA ++
Sbjct: 93 DPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDIL 152
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM---DKRGVVKDLHSYS 181
+G + V YN +L+G+ + E M R ++ SY+
Sbjct: 153 VKRMPELGCTPDVVS-----YNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYA 207
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
I ++ G+ KA L+ EM +GI+ +VV Y TVI + ++ VD A V+++M +
Sbjct: 208 IVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDK 267
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREI 298
G +P T N +I G+ +E +L EM G PD TY L + RE
Sbjct: 268 GVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREA 327
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
LFD MI GI+P + Y +L+ + G L + + M E G SPD +N + A
Sbjct: 328 RFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTA 387
Query: 359 LIDKGMLDMARKYDEEMFAKGLS 381
K M+D A +M +GLS
Sbjct: 388 YAKKAMIDEAMHIFNKMKQQGLS 410
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 160/408 (39%), Gaps = 82/408 (20%)
Query: 50 SWNLIHRMKDNP--SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCN 106
+ L+H M D+ S PN ++ I+ + T V++A F ++ + G++ + V+Y
Sbjct: 184 ALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTT 243
Query: 107 LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE 166
++D LC+ + V A+ G + + G+ N T YN ++ G+ + W + E
Sbjct: 244 VIDGLCKAQVVDRAE----GVFQQMIDKGVKPDNDT--YNCLIHGYLSIGKWKEVVRMLE 297
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY----------- 215
EM G+ D ++Y ++ +C +G+ +A L+ M +KGIK +V Y
Sbjct: 298 EMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKG 357
Query: 216 ------------------------NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
N + A +D AM ++ +M++ G P VV
Sbjct: 358 ALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYG 417
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL------EKPREIL------ 299
+I LC+ GRV +A +M +G P++ ++ L EK +E
Sbjct: 418 ALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQ 477
Query: 300 --------------------------GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
L D M G RP + +Y L+ G +
Sbjct: 478 GIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEA 537
Query: 334 FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
M +G PDE+ YN L+ G +D A EM G++
Sbjct: 538 AKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGIT 585
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 103/237 (43%), Gaps = 36/237 (15%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN +L G+ + + EM + G+ + +YS + + + + +A +LY M
Sbjct: 556 YNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMI 615
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
G + ++ YN ++ + + VD A ++++ + Q + T N +I L ++GR
Sbjct: 616 TSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNE 675
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
+A + A + G VPDV TY CL + + +IE G + D
Sbjct: 676 DAMHLFATISSYGLVPDVFTY-----CL--------IAENLIEEGYLEEFDD-------- 714
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY----DEEMFA 377
++ ME+ G +P+ NALV L+ +G + A Y DE+ F+
Sbjct: 715 -----------LFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFS 760
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 169/402 (42%), Gaps = 62/402 (15%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D +ALE FN +++ F HT TY ++ LG EF+ L+ M++N ++
Sbjct: 19 DPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGA 78
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENK 129
+ K Y V EA+ TF ++D + V
Sbjct: 79 YIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHS------------------------- 113
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
+N I+ + + + + + M RGV D+++Y+I + CK
Sbjct: 114 ---------------HNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCK 158
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
+ +P+ A++L + M + G + VAY TV+ + S D A ++ EM P VV
Sbjct: 159 TARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVA 218
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDR----- 304
N ++ +LC+ G V E+ +L ++ K+G P++ T++ F + L RE G DR
Sbjct: 219 FNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGL--CRE--GALDRAVRNS 274
Query: 305 -----------MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
M+ G P TY ++ + + G ++ V K G PDEF Y
Sbjct: 275 RVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYC 334
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+L++ G D A ++ KGL +P L L++G
Sbjct: 335 SLINGFCKDGDPDRAMAVFKDGLGKGL--RPSIVLYNTLIKG 374
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 121/239 (50%), Gaps = 3/239 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN I+ G+ K ++ +G D +Y ++ CK G P +A+ ++K+
Sbjct: 298 YNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGL 357
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
KG++ +V YNT+I+ + + A+++ EM E GC P++ T N VI LC+ G V
Sbjct: 358 GKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVS 417
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLL 321
+A ++ + KGC PD+ TY+ C + K + +RM G+ P + TY LL
Sbjct: 418 DASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLL 477
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ G V ++K MEE GC+P+ YN +VD+L ++ A EM +KGL
Sbjct: 478 NGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGL 536
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 110/231 (47%), Gaps = 4/231 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN+++ G KM ++ +G D+ +Y+ +D CK K A ++ M
Sbjct: 403 YNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMW 462
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+G+ DV+ YNT++ + + + M +++ M E GC P+++T N ++ LC+ +V
Sbjct: 463 SQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVN 522
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIES-GIRPKMDTYVML 320
EA +L EM KG PDV+++ F K +I G LF RM + + TY ++
Sbjct: 523 EAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNII 582
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
+ F + ++ M+ GC PD + Y ++D G + K+
Sbjct: 583 VSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKF 633
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 138/326 (42%), Gaps = 59/326 (18%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYV-------TAHLVNEA 86
YN++I L + + L++ M +N +PN T+ ++ +HLV++A
Sbjct: 368 YNTLIKGLSQQGLILPALQLMNEMAEN-GCLPNIWTYNLVINGLCKMGCVSDASHLVDDA 426
Query: 87 MGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYN 146
+ D F +Y L+D C+ + A E+ + G+ YN
Sbjct: 427 IAKGCPPDIF------TYNTLIDGYCKQLKLDSATEMV----NRMWSQGMTP--DVITYN 474
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
+L G K + E ++ M+++G ++ +Y+I +D +CK+ K +AV L EMK K
Sbjct: 475 TLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSK 534
Query: 207 GIKMDVVA------------------------------------YNTVIRAVGVSEGVDF 230
G+K DVV+ YN ++ A ++
Sbjct: 535 GLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNM 594
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR 290
AM+++ M+ GC P T VI C+ G + + Y L E +K +P + T+
Sbjct: 595 AMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLN 654
Query: 291 CL---EKPREILGLFDRMIESGIRPK 313
CL +K E +G+ M++ GI P+
Sbjct: 655 CLCVKDKVHEAVGIIHLMLQKGIVPE 680
>gi|298712182|emb|CBJ33054.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 903
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 169/389 (43%), Gaps = 31/389 (7%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN I E++ + +L+H M++ P+ T+ I+ A +A+ F ++
Sbjct: 303 YNLAICTCTDCGEWEEALDLLHFMREVGGVEPDVVTYNIVVAACGKAGQGEKAIEIFREM 362
Query: 94 DEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
E G+K D +S+ + A C + E F E + G +N ++
Sbjct: 363 SEVGIKPDVISFTTAISA-CGSCGLSEEALSIFREMERAGVR-----PNIITHNAVMSAC 416
Query: 153 FKMSWWGKCREFWEEMDKRGV----------------VKDLHSYSIYMDIMCKSGKPW-K 195
W + +F+ E+ V D SY+ + C+ G+ W +
Sbjct: 417 IAAGQWEEALDFFTEVVDGSGAANGGGGGGPPPDPVEVADACSYNTALS-ACEVGEQWGR 475
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A+ L ++M K+G+K V++YNTVI A G D A+ + REM E G P V+T N+ I
Sbjct: 476 ALSLLRDMPKRGVKPVVISYNTVISACGKCGEGDQALALLREMPERGLMPDVITFNSAIA 535
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRP 312
L +GR +A ++ EMP+ G D ITY L + L L M +G+ P
Sbjct: 536 ALSNSGRPDDAVRLMREMPRAGVAADAITYSSALTGLAHAGRWEQALSLLREMQGAGVSP 595
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
+ Y +R G G ++ ++M G +P+ F+Y+A + A G +
Sbjct: 596 TVICYTAAIRACGEAGKGDEALLLLREMPTAGVTPNLFSYSATISACGKDGRWEQGLALL 655
Query: 373 EEMFAKGLSAKPREELGTKLVQG-GLDGE 400
EM A GL+ P E T + G G+ G+
Sbjct: 656 NEMPALGLT--PNEFCYTAAITGCGIGGQ 682
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 160/386 (41%), Gaps = 15/386 (3%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
+W+ AL+ +++ TYN V+ GK + + + + M + P+
Sbjct: 314 GEWEEALDLLHFMREVGGVEPDVVTYNIVVAACGKAGQGEKAIEIFREMSEV-GIKPDVI 372
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCE-----------YKHV 117
+F + L EA+ F +++ G++ + N V + C + V
Sbjct: 373 SFTTAISACGSCGLSEEALSIFREMERAGVRPNIITHNAVMSACIAAGQWEEALDFFTEV 432
Query: 118 IEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
++ G VE+ YN L WG+ +M KRGV +
Sbjct: 433 VDGSGAANGGGGGGPPPDPVEVADACSYNTALSACEVGEQWGRALSLLRDMPKRGVKPVV 492
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
SY+ + K G+ +A+ L +EM ++G+ DV+ +N+ I A+ S D A+R+ RE
Sbjct: 493 ISYNTVISACGKCGEGDQALALLREMPERGLMPDVITFNSAIAALSNSGRPDDAVRLMRE 552
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR-CLE--K 294
M G +T ++ + L GR +A ++L EM G P VI Y R C E K
Sbjct: 553 MPRAGVAADAITYSSALTGLAHAGRWEQALSLLREMQGAGVSPTVICYTAAIRACGEAGK 612
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
E L L M +G+ P + +Y + G+ G + +M LG +P+EF Y A
Sbjct: 613 GDEALLLLREMPTAGVTPNLFSYSATISACGKDGRWEQGLALLNEMPALGLTPNEFCYTA 672
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGL 380
+ G + A M A G+
Sbjct: 673 AITGCGIGGQWERAVATFRSMIASGI 698
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 176/432 (40%), Gaps = 69/432 (15%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP-NH 67
DW+ AL +E + TY + I + G+ + D + +L+ MKD +P
Sbjct: 208 GDWELALSMIREMEAEYGIKPNHITYQAAIKVCGRCGKADEAASLLIEMKDG--GVPLKT 265
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQE----L 123
+ + +F + A T ++ ++ +K V NL A+C E +E L
Sbjct: 266 SVYSAVFNAFRRVDHWQAAASTLREIHDWPVKPNVFNYNL--AICTCTDCGEWEEALDLL 323
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + VG VE + YN+++ K K E + EM + G+ D+ S++
Sbjct: 324 HF--MREVGG---VEPD-VVTYNIVVAACGKAGQGEKAIEIFREMSEVGIKPDVISFTTA 377
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVS----EGVDF--------- 230
+ G +A+ +++EM++ G++ +++ +N V+ A + E +DF
Sbjct: 378 ISACGSCGLSEEALSIFREMERAGVRPNIITHNAVMSACIAAGQWEEALDFFTEVVDGSG 437
Query: 231 --------------------------------------AMRVYREMREMGCQPSVVTCNT 252
A+ + R+M + G +P V++ NT
Sbjct: 438 AANGGGGGGPPPDPVEVADACSYNTALSACEVGEQWGRALSLLRDMPKRGVKPVVISYNT 497
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE---KPREILGLFDRMIESG 309
VI + G +A A+L EMP++G +PDVIT++ L +P + + L M +G
Sbjct: 498 VISACGKCGEGDQALALLREMPERGLMPDVITFNSAIAALSNSGRPDDAVRLMREMPRAG 557
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
+ TY L G + ++M+ G SP Y A + A + G D A
Sbjct: 558 VAADAITYSSALTGLAHAGRWEQALSLLREMQGAGVSPTVICYTAAIRACGEAGKGDEAL 617
Query: 370 KYDEEMFAKGLS 381
EM G++
Sbjct: 618 LLLREMPTAGVT 629
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 158/377 (41%), Gaps = 39/377 (10%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+YN I +++L+ ++I M+ PNH T++ K +EA +
Sbjct: 196 SYNCAIPACVTGGDWELALSMIREMEAEYGIKPNHITYQAAIKVCGRCGKADEAASLLIE 255
Query: 93 LDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + G+ + S Y + +A H A S L E++ + +
Sbjct: 256 MKDGGVPLKTSVYSAVFNAFRRVDHWQAAA------------STLREIHDWPVKPNVFNY 303
Query: 152 WFKMSWWGKCREFWEEMD-------KRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+ C E+ E +D GV D+ +Y+I + K+G+ KA+++++EM
Sbjct: 304 NLAICTCTDCGEWEEALDLLHFMREVGGVEPDVVTYNIVVAACGKAGQGEKAIEIFREMS 363
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+ GIK DV+++ T I A G + A+ ++REM G +P+++T N V+ G+
Sbjct: 364 EVGIKPDVISFTTAISACGSCGLSEEALSIFREMERAGVRPNIITHNAVMSACIAAGQWE 423
Query: 265 EAYAVLAEMPKKGC----------------VPDVITYHCFFRCLEKPRE---ILGLFDRM 305
EA E+ V D +Y+ E + L L M
Sbjct: 424 EALDFFTEVVDGSGAANGGGGGGPPPDPVEVADACSYNTALSACEVGEQWGRALSLLRDM 483
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
+ G++P + +Y ++ G+ G + ++M E G PD +N+ + AL + G
Sbjct: 484 PKRGVKPVVISYNTVISACGKCGEGDQALALLREMPERGLMPDVITFNSAIAALSNSGRP 543
Query: 366 DMARKYDEEMFAKGLSA 382
D A + EM G++A
Sbjct: 544 DDAVRLMREMPRAGVAA 560
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 141/353 (39%), Gaps = 12/353 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+YN+VI GK E D + L+ M + +P+ TF + ++A+ +
Sbjct: 494 SYNTVISACGKCGEGDQALALLREMPER-GLMPDVITFNSAIAALSNSGRPDDAVRLMRE 552
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G+ D ++Y + + L +A L E + G S V Y +R
Sbjct: 553 MPRAGVAADAITYSSALTGLAHAGRWEQALSL-LREMQGAGVSPTV-----ICYTAAIRA 606
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + EM GV +L SYS + K G+ + + L EM G+ +
Sbjct: 607 CGEAGKGDEALLLLREMPTAGVTPNLFSYSATISACGKDGRWEQGLALLNEMPALGLTPN 666
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
Y I G+ + A+ +R M G QP+VV + + L G V A +L+
Sbjct: 667 EFCYTAAITGCGIGGQWERAVATFRSMIASGIQPTVVGYTSAVSALAHCGEVDLALELLS 726
Query: 272 EMPKK-GCVPDVITYHC-FFRCLEKPR-EILGLFDR-MIESGIRPKMDTYVMLLRKFGRW 327
EM ++ G P+ TY C + ++ R M +GI P++ Y+ +R G
Sbjct: 727 EMKEEAGIEPNEQTYAAVILACGNGGQGHLVAQVQRDMASAGITPRLTGYLSAIRASGEC 786
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G + +ME G P YNA + A G A +EM KGL
Sbjct: 787 GNWSEATSLLGEMEAAGVPPTVSCYNAAITACGKSGKWQEALDLLDEMPGKGL 839
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 115/281 (40%), Gaps = 42/281 (14%)
Query: 141 KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
T +Y+ + K WG+ + M + G + + + + +D K+G+ +A+ L
Sbjct: 123 STFVYSKCISRMAKCFRWGEALDILARMAELGAMPNSYCVNAALDACGKAGRVQEALGLM 182
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR-EMGCQPSVVTCNTVIKLLCE 259
++ + GI++DVV+YN I A + A+ + REM E G +P+ +T IK+
Sbjct: 183 RDARASGIELDVVSYNCAIPACVTGGDWELALSMIREMEAEYGIKPNHITYQAAIKVCGR 242
Query: 260 NGRVREAYAVLAEMPKKGCVP-DVITYHCFFRCLE--------------------KP--- 295
G+ EA ++L EM K G VP Y F KP
Sbjct: 243 CGKADEAASLLIEM-KDGGVPLKTSVYSAVFNAFRRVDHWQAAASTLREIHDWPVKPNVF 301
Query: 296 ---------------REILGLFDRMIE-SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
E L L M E G+ P + TY +++ G+ G ++++
Sbjct: 302 NYNLAICTCTDCGEWEEALDLLHFMREVGGVEPDVVTYNIVVAACGKAGQGEKAIEIFRE 361
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
M E+G PD ++ + A G+ + A EM G+
Sbjct: 362 MSEVGIKPDVISFTTAISACGSCGLSEEALSIFREMERAGV 402
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 84/211 (39%), Gaps = 18/211 (8%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
W+RA+ F + T Y S + L E DL+ L+ MK+ PN
Sbjct: 681 GQWERAVATFRSMIAS-GIQPTVVGYTSAVSALAHCGEVDLALELLSEMKEEAGIEPNEQ 739
Query: 69 TFRIMF---KRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELC 124
T+ + HLV + + G+ ++ Y + + A E + EA L
Sbjct: 740 TYAAVILACGNGGQGHLVAQVQ---RDMASAGITPRLTGYLSAIRASGECGNWSEATSL- 795
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
GE + G V YN + K W + + +EM +G+V+D + S +
Sbjct: 796 LGEMEAAGVPPTV-----SCYNAAITACGKSGKWQEALDLLDEMPGKGLVRDSGTLSAAI 850
Query: 185 DIMCKSGKPWKAVKLYKEM----KKKGIKMD 211
K+G+ KA L +EM ++KG + D
Sbjct: 851 SACQKAGRGVKAAGLVEEMLEMAREKGGERD 881
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 112/306 (36%), Gaps = 13/306 (4%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+A W++AL ++ + T Y + I G+ + D + L+ M PN
Sbjct: 574 HAGRWEQALSLLREMQ-GAGVSPTVICYTAAIRACGEAGKGDEALLLLREMP-TAGVTPN 631
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCF 125
++ + + N++ GL +E Y + C E F
Sbjct: 632 LFSYSATISACGKDGRWEQGLALLNEMPALGLTPNEFCYTAAITG-CGIGGQWERAVATF 690
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM-DKRGVVKDLHSYSIYM 184
G V + + + G ++ E EM ++ G+ + +Y+ +
Sbjct: 691 RSMIASGIQPTVVGYTSAVSALAHCGEVDLAL-----ELLSEMKEEAGIEPNEQTYAAVI 745
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
G+ ++ ++M GI + Y + IRA G A + EM G
Sbjct: 746 LACGNGGQGHLVAQVQRDMASAGITPRLTGYLSAIRASGECGNWSEATSLLGEMEAAGVP 805
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGL 301
P+V N I ++G+ +EA +L EMP KG V D T +K + GL
Sbjct: 806 PTVSCYNAAITACGKSGKWQEALDLLDEMPGKGLVRDSGTLSAAISACQKAGRGVKAAGL 865
Query: 302 FDRMIE 307
+ M+E
Sbjct: 866 VEEMLE 871
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 170/362 (46%), Gaps = 34/362 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWN----LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
TYN V+ + K + W L+ MK++ P+ T+ + L EA
Sbjct: 209 TYNVVLHVYSKM---AVPWKEVVELVASMKEH-GVAPDRYTYNTLISCCRRRALYKEAAQ 264
Query: 89 TFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
F+++ G + D+V++ +L+D + + EA E+ E + VG V YN
Sbjct: 265 VFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEV-IQEMERVGCPPSV-----VTYNS 318
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++ + K + +EM+ +G+ D+ +Y+ + + ++GK A+ Y EM + G
Sbjct: 319 LISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNG 378
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
K ++ YN +I+ GV M V+ E R G P +VT NT++ + +NG E
Sbjct: 379 CKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVS 438
Query: 268 AVLAEMPKKGCVPDVITY----HCFFRCLEKPREILGLFD-------RMIESGIRPKMDT 316
V EM K G +P+ TY + RC GLFD RM+E+GI P + T
Sbjct: 439 GVFKEMKKAGYIPERDTYVSLISSYSRC--------GLFDLAMQIYKRMMEAGIYPDVST 490
Query: 317 YVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
Y +L R G ++ +MEE C PDE++Y++L+ A + LD + ++++
Sbjct: 491 YNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIY 550
Query: 377 AK 378
++
Sbjct: 551 SE 552
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 127/275 (46%), Gaps = 39/275 (14%)
Query: 145 YNMILRGWFKMSW-WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
YN++L + KM+ W + E M + GV D ++Y+ + + +A +++ EM
Sbjct: 210 YNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEM 269
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
K G + D V +N+++ G + D A+ V +EM +GC PSVVT N++I ++G +
Sbjct: 270 KASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLL 329
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLE--------------------KPR------- 296
+A A+ EM KG PDV+TY L+ KP
Sbjct: 330 EQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNAL 389
Query: 297 -----------EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
E++ +FD +G P + T+ LL FG+ G V V+K+M++ G
Sbjct: 390 IKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGY 449
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
P+ Y +L+ + G+ D+A + + M G+
Sbjct: 450 IPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGI 484
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 110/259 (42%), Gaps = 39/259 (15%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK--------- 195
Y ++ + + + + M GV + +Y++ + + K PWK
Sbjct: 175 YTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASM 234
Query: 196 ---------------------------AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV 228
A +++ EMK G + D V +N+++ G +
Sbjct: 235 KEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRH 294
Query: 229 DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
D A+ V +EM +GC PSVVT N++I ++G + +A A+ EM KG PDV+TY
Sbjct: 295 DEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTL 354
Query: 289 FRCLEKPREILGL---FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
L++ +I +D M+ +G +P + TY L++ G G + V+ + G
Sbjct: 355 ISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGF 414
Query: 346 SPDEFAYNALVDALIDKGM 364
PD +N L+ G+
Sbjct: 415 VPDIVTWNTLLAVFGQNGL 433
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 10/233 (4%)
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
E+ GV+ + + +M ++G+ +A L D AY ++ A +
Sbjct: 131 ELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPGP----DAGAYTALVSAFSRAG 186
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV-REAYAVLAEMPKKGCVPDVITY 285
A+ V+R M + G QP++VT N V+ + + +E ++A M + G PD TY
Sbjct: 187 RFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTY 246
Query: 286 HCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE 342
+ C + +E +FD M SG P T+ LL +G+ V ++ME
Sbjct: 247 NTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMER 306
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+GC P YN+L+ + + G+L+ A +EM KG+ KP T L+ G
Sbjct: 307 VGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGM--KPDVVTYTTLISG 357
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/446 (21%), Positives = 175/446 (39%), Gaps = 86/446 (19%)
Query: 11 WKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
+K A + F+ ++ F T+NS++D+ GK D + +I M + P+ T+
Sbjct: 259 YKEAAQVFDEMKAS-GFEPDKVTFNSLLDVYGKARRHDEAIEVIQEM-ERVGCPPSVVTY 316
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDAL------------------ 111
+ YV L+ +A+ +++ G+K D V+Y L+ L
Sbjct: 317 NSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVR 376
Query: 112 -------CEYKHVIEAQEL---------CFGENKNVGFSGLVEMNKTKIYNMILRGWFKM 155
C Y +I+ + F E ++ GF + +N +L + +
Sbjct: 377 NGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGF-----VPDIVTWNTLLAVFGQN 431
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
+ ++EM K G + + +Y + + G A+++YK M + GI DV Y
Sbjct: 432 GLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTY 491
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI--------------------- 254
N V+ A+ + A +++ EM E C+P + ++++
Sbjct: 492 NAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYS 551
Query: 255 -----------KLLCENGRVR---EAYAVLAEMPKKGCVPDV------ITYHCFFRCLEK 294
L+ N +V EA E+ +K C D+ ++ + R + K
Sbjct: 552 ERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRK 611
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
+IL L M ES I TY L+ + R G + +++ G PD ++YN
Sbjct: 612 VEKILSL---MKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNT 668
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGL 380
++ A KG + A + EM GL
Sbjct: 669 VIYAYGRKGQMKEASRLFSEMKCSGL 694
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 71/131 (54%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ + ++ KC E+ GV D +SY+ + + G+ +A +L+ EMK
Sbjct: 631 YNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMK 690
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
G+K DVV YN +++ + + A+ + R M GC+P+ T N++++ C NG++
Sbjct: 691 CSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLT 750
Query: 265 EAYAVLAEMPK 275
+A ++ +P+
Sbjct: 751 DAKIFVSNLPQ 761
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 136/316 (43%), Gaps = 11/316 (3%)
Query: 32 DTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
DTY S+I + FDL+ + RM + P+ +T+ + +A F
Sbjct: 454 DTYVSLISSYSRCGLFDLAMQIYKRMME-AGIYPDVSTYNAVLSALARGGRWEQAEKLFA 512
Query: 92 KLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
+++E K DE SY +L+ A K + + + L + +S +E + + ++L
Sbjct: 513 EMEERDCKPDEYSYSSLLHAYANAKRLDKMKALS-----DDIYSERIEPHNWLVKTLVLV 567
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
K++ + + + E+ ++ D++ + + I K+ K K+ MK+ I +
Sbjct: 568 NS-KVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINL 626
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
YN+++ + + E++ G +P + NTVI G+++EA +
Sbjct: 627 SAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLF 686
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
+EM G PDV+TY+ F + E + L M+ G +P TY ++ + R
Sbjct: 687 SEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRN 746
Query: 328 GFLRPVFVVWKKMEEL 343
G L + + +L
Sbjct: 747 GKLTDAKIFVSNLPQL 762
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 149/386 (38%), Gaps = 66/386 (17%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++I + G +F + + + +P+ T+ + + L +E G F +
Sbjct: 385 TYNALIKMHGVRGKFPEMMAVFDEFR-SAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKE 443
Query: 93 LDEFG----------LKDEVSYCNLVD-ALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
+ + G L S C L D A+ YK ++EA G +V
Sbjct: 444 MKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEA-----GIYPDVS--------- 489
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM----------------- 184
YN +L + W + + + EM++R D +SYS +
Sbjct: 490 --TYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSD 547
Query: 185 DIMCKSGKP--W----------------KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
DI + +P W +A K + E+++K +D+ N ++ G +
Sbjct: 548 DIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNR 607
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
V ++ M+E S T N+++ + G + +L E+ G PD +Y+
Sbjct: 608 MVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYN 667
Query: 287 CFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
+ +E LF M SG++P + TY + ++ + + + M
Sbjct: 668 TVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQ 727
Query: 344 GCSPDEFAYNALVDALIDKGMLDMAR 369
GC P+E YN++V+ G L A+
Sbjct: 728 GCKPNERTYNSIVEGYCRNGKLTDAK 753
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP 295
RE+ G T I+++ GR+ EA A+L P PD Y +
Sbjct: 130 RELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPG----PDAGAYTALVSAFSRA 185
Query: 296 ---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL-RPVFVVWKKMEELGCSPDEFA 351
R+ + +F RM++SG++P + TY ++L + + + V + M+E G +PD +
Sbjct: 186 GRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYT 245
Query: 352 YNALVDALIDKGMLDMARKYDEEMFAKGL 380
YN L+ + + A + +EM A G
Sbjct: 246 YNTLISCCRRRALYKEAAQVFDEMKASGF 274
>gi|224089100|ref|XP_002308636.1| predicted protein [Populus trichocarpa]
gi|222854612|gb|EEE92159.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 164/378 (43%), Gaps = 24/378 (6%)
Query: 18 FNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSW-NLIHRMKDNPSS-IPNHATFRIMFK 75
F W E F + +NS+++ LGK EF +W L+ R+ N + + TF I+ +
Sbjct: 134 FLWAEKKPGFQSSAALFNSMVNFLGKAREFGSAWCLLLDRIGGNEGGDLVSSDTFAILIR 193
Query: 76 RYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-----LVDALCEYKHVIEAQELCFGENKN 130
RY A + A+ TF L L+D+LC+ HV A +
Sbjct: 194 RYTRAGMSEAAIRTFEYASSLDLIHNSEAGTSLFEILLDSLCKEGHVRVATDY------- 246
Query: 131 VGFSGLVEMN-----KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
F VE + +IYN++L GWF+ W EM K+ V + +Y ++
Sbjct: 247 --FDRKVEKDPCWVPSVRIYNILLNGWFRSRKLKHAERLWLEMKKKNVKPSVVTYGTLVE 304
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
+ + +A++L EMK++GIK + + YN +I A+ + + + P
Sbjct: 305 GYSRMRRVERAIELVDEMKREGIKSNAIVYNPIIDALAEAGRFKEVLGMMEHFFLCEEGP 364
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLF 302
++ T N+++K C+ G + A +L M + P TY+ FFR K R+I + L+
Sbjct: 365 TISTYNSLVKGYCKAGDLVGASKILKMMISREVFPTPTTYNYFFRHFSKCRKIEEGMNLY 424
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
+MIESG P TY +LL+ L + K+M GC D L
Sbjct: 425 TKMIESGYTPDRLTYHLLLKMLCEEERLDLAVQISKEMRARGCDMDLATSTMFTHLLCKM 484
Query: 363 GMLDMARKYDEEMFAKGL 380
+ A E+M +G+
Sbjct: 485 QRFEEAFAEFEDMLRRGI 502
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 104/227 (45%), Gaps = 15/227 (6%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCE---YKHVIEA 120
P+ T+ + + Y V A+ +++ G+K + + Y ++DAL E +K V+
Sbjct: 294 PSVVTYGTLVEGYSRMRRVERAIELVDEMKREGIKSNAIVYNPIIDALAEAGRFKEVLGM 353
Query: 121 QELCFGENKNVGFSGLVEMNKT-KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
E F L E T YN +++G+ K + + M R V +
Sbjct: 354 MEHFF----------LCEEGPTISTYNSLVKGYCKAGDLVGASKILKMMISREVFPTPTT 403
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y+ + K K + + LY +M + G D + Y+ +++ + E +D A+++ +EMR
Sbjct: 404 YNYFFRHFSKCRKIEEGMNLYTKMIESGYTPDRLTYHLLLKMLCEEERLDLAVQISKEMR 463
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
GC + T LLC+ R EA+A +M ++G VP +T+H
Sbjct: 464 ARGCDMDLATSTMFTHLLCKMQRFEEAFAEFEDMLRRGIVPQYLTFH 510
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 179/396 (45%), Gaps = 15/396 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTH--TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
C D LE F + D F T YN+++ L KF D + + +N S
Sbjct: 132 CSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQIS 191
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQE 122
PN TF M Y V EA +K+ + GL D +Y +L+ C K V A E
Sbjct: 192 -PNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYE 250
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ + + N+ N+I G + + + + +M + + +Y++
Sbjct: 251 VFL-----IMPQKGCQRNEVSYTNLI-HGLCEAGRINEALKLFADMTEDNCCPTVRTYTV 304
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ + SG+ +A+ L+ EMK+KG + +V Y +I + +D A ++ EM E G
Sbjct: 305 LIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---L 299
PSVVT N +I C+ G + +A+ +L M C P+ TY+ L K R++ +
Sbjct: 365 LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAM 424
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
L ++M+E + P + TY L+ + L + + M E G PD++ Y+ +D L
Sbjct: 425 ALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTL 484
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+G ++ A + + AKG+ K E + T L+ G
Sbjct: 485 CKEGRVEEAGTLFDSVKAKGV--KANEVIYTALIDG 518
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 174/408 (42%), Gaps = 37/408 (9%)
Query: 6 CYANDWKRALEFF-NWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C A AL+ F + E +C T TY +I L + NL + MK+
Sbjct: 275 CEAGRINEALKLFADMTEDNC--CPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCE- 331
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQE- 122
PN T+ ++ + ++EA +++ E GL V+Y L+D C+ + +A E
Sbjct: 332 PNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEI 391
Query: 123 ----------------------LCFGENKNVGFSGLVEMNKTKI------YNMILRGWFK 154
LC + + L +M + K+ YN ++ G K
Sbjct: 392 LDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCK 451
Query: 155 MSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVA 214
++ M++ G+V D +YS+++D +CK G+ +A L+ +K KG+K + V
Sbjct: 452 VNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVI 511
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
Y +I +D A + M C P+ T N +I+ LC+ +++EA +++A+M
Sbjct: 512 YTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKML 571
Query: 275 KKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
G P V+TY + K L +F+ M+ G +P + TY L + G L
Sbjct: 572 TMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLE 631
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
V V KM E G PD Y L+D G+ A + + M G
Sbjct: 632 EVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTG 679
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 163/386 (42%), Gaps = 46/386 (11%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
Y ++ID K + D++++L+ RM N + +PN T+ ++ + + EA K+
Sbjct: 512 YTALIDGYCKVGKIDVAYSLLERML-NDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKM 570
Query: 94 DEFGLKDEV-SYCNLVDALCE---YKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
G+K V +Y L+ + + + H ++ F ++G+ V Y L
Sbjct: 571 LTMGVKPTVVTYTILIGEMLKDGAFDHALKV----FNHMVSLGYQPDV-----CTYTAFL 621
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
+F + + +M++ G++ DL +Y++ +D + G +A K M G K
Sbjct: 622 HAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCK 681
Query: 210 MDVVAYNTVIR------------------AVGVSEGVDFA-----------MRVYREMRE 240
+ + +I+ +V VD A ++++ +M E
Sbjct: 682 PSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVE 741
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC---LEKPRE 297
GC V +I C+ R+ EA ++ M ++G P Y+ C L E
Sbjct: 742 HGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAE 801
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ L D M+E+G+ P +++Y +L+ G V+ + G + DE A+ L+D
Sbjct: 802 AVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLID 861
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAK 383
L+ + ++D + + M K +A+
Sbjct: 862 GLLKRDLVDECSELIDIMEEKDATAQ 887
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 175/379 (46%), Gaps = 35/379 (9%)
Query: 38 IDILGKFFEFDLSWNLIHRMKDNPSS-------------IPNHATFRIMFKRYVTAHLVN 84
+ + G DL +IHR+ D ++ N T + YV A V
Sbjct: 60 LGLYGDILVPDLVGKVIHRIPDPNTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVE 119
Query: 85 EAMGTF-NKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK 143
+A F + + DEVSY L++ + V +A L FGE K+ G + L +
Sbjct: 120 DAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALAL-FGEMKDSGIAVL------R 172
Query: 144 IYNMILRGWFKMSWWGKCREFWEEM-DKRGVVK-DLHSYSIYMDIMCKSGKPWKAVKLYK 201
+N++LRG + GK WE D G+ +L SY+I +D +CKS K KA+ L+K
Sbjct: 173 SHNIVLRG---LCSGGKISMAWEVFKDMSGIFSPNLISYTIMIDGLCKSRKVDKAITLFK 229
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
+M K I DVV Y +I +G V A ++ E R GC P+VVT NT+I LC+ G
Sbjct: 230 QMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCG 289
Query: 262 RVREAYAVLAEMPKKGCV-PDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTY 317
R+ A + +M ++ + PD+ TY L + + L++ M+++G P + TY
Sbjct: 290 RIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTY 349
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELG--CSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
LL + G +++KM +G C P+ Y L+D L A K +EM
Sbjct: 350 NTLLDGLCKSGCEDKAMEIFRKM-GVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEM 408
Query: 376 FAKGLSAKPREELGTKLVQ 394
+G S P T ++Q
Sbjct: 409 --EGRSLLPDAVTFTTVIQ 425
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 166/381 (43%), Gaps = 50/381 (13%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A D K+AL F E ++N V+ L + ++W + M S PN
Sbjct: 150 AGDVKKALALFG--EMKDSGIAVLRSHNIVLRGLCSGGKISMAWEVFKDMSGIFS--PNL 205
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKL-DEFGLKDEVSYCNLVDALCEYKHVIEAQELCFG 126
++ IM + V++A+ F ++ D+ D V+Y L+D L + + V EA +L F
Sbjct: 206 ISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDL-FE 264
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVK-DLHSYSIYMD 185
E + G V YN ++ G K +++M + +K D+ +YS ++
Sbjct: 265 EARAKGCHPTV-----VTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALIN 319
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG-CQ 244
+ S + KA +LY+EM G DVV YNT++ + S D AM ++R+M C
Sbjct: 320 GLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCD 379
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY----------------HCF 288
P+V+T +I C+ R+ +A + EM + +PD +T+ H
Sbjct: 380 PNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHEL 439
Query: 289 FRCLEK---PREIL------------------GLFDRMIESGIRPKMDTYVMLLRKFGRW 327
F + K P +L L DRM++SG P + TY L+ F R
Sbjct: 440 FESIGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRT 499
Query: 328 GFLRPVFVVWKKMEELGCSPD 348
G +++ +M E+G P+
Sbjct: 500 GRYSDALIMYHEMIEMGFPPE 520
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 178/361 (49%), Gaps = 19/361 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIH-RMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
+++S+I +L + L L+H R + +P++ + I+ + +++A+ +
Sbjct: 399 SFSSLIGVLAR--NGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRD 456
Query: 92 KLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK---IYNM 147
++ G D V+Y ++ LC+ K +A L F+ +VE +
Sbjct: 457 EMLARGCFMDVVTYNTFLNGLCKKKMFADADML---------FNEMVERGMVPDFYTFTT 507
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++RG+ K K +E M + + D +Y+ +D CK+G+ +A +L+ +M +K
Sbjct: 508 LIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD 567
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
I D ++Y TV+ S + A+ + +M E G +P++VTCNT+IK C +G + +AY
Sbjct: 568 IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAY 627
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKF 324
L++M G +PD +Y+ K + L + M + G++ + TY ++L F
Sbjct: 628 EYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGF 687
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
G ++ V +KM E+G +PD Y++L++ + + + A ++ +EM +GL
Sbjct: 688 CAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDD 747
Query: 385 R 385
R
Sbjct: 748 R 748
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 152/332 (45%), Gaps = 12/332 (3%)
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFG 126
T+ + Y LV EA N G++ + +Y ++ LC+ A+++
Sbjct: 293 VTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLI- 351
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
E +G + YN +L + + +E ++EM +RGV+ DL S+S + +
Sbjct: 352 EMLQLGLTP-----NAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGV 406
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+ ++G ++A+ ++EM++ GI D V Y +I + + A+++ EM GC
Sbjct: 407 LARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMD 466
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFD 303
VVT NT + LC+ +A + EM ++G VPD T+ R K + L LF+
Sbjct: 467 VVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFE 526
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
M+ + ++P TY L+ F + G + +W M PD +Y +++ G
Sbjct: 527 AMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSG 586
Query: 364 MLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+L A ++M KG+ +P L++G
Sbjct: 587 LLPEALNLCDQMLEKGI--RPNLVTCNTLIKG 616
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 114/237 (48%), Gaps = 3/237 (1%)
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N +L G + W E + E+ + G+ ++++ +I ++ +CK K + +M+
Sbjct: 226 NKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG 285
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
KG+ D+V YNT+I A V+ A ++ G +P ++T N ++ LC+ G+
Sbjct: 286 KGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDR 345
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLR 322
A VL EM + G P+ TY+ + + IL +FD M G+ P + ++ L+
Sbjct: 346 AKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIG 405
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R G L + +++ME G PD Y L+D G L A K +EM A+G
Sbjct: 406 VLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARG 462
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 172/396 (43%), Gaps = 36/396 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN+++ L K ++D + +++ M PN AT+ + + EA F++
Sbjct: 329 TYNAILYGLCKIGKYDRAKDVLIEMLQ-LGLTPNAATYNTLLVEICRRDNILEAQEIFDE 387
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEA-------------------QELCFGENKNVG 132
+ G L D VS+ +L+ L H+ +A L G +N
Sbjct: 388 MSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGA 447
Query: 133 FSGLVEMNKTKI----------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
S ++M + YN L G K + + EM +RG+V D ++++
Sbjct: 448 LSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTT 507
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ CK G KA+ L++ M + +K D V YNT+I + + A ++ +M
Sbjct: 508 LIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD 567
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLF 302
P ++ TV+ C +G + EA + +M +KG P+++T + + + ++ +
Sbjct: 568 IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAY 627
Query: 303 D---RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ +MI +GI P +Y L+ + + L F++ +ME+ G + YN +++
Sbjct: 628 EYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGF 687
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+G + A + +M G++ P + L+ G
Sbjct: 688 CAEGKMQEAEQVLRKMIEIGIN--PDGATYSSLING 721
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 124/253 (49%), Gaps = 9/253 (3%)
Query: 139 MNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
MN+ K+ YN+++ G K S K E EM RGV D +++ MD +CK+GK
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
+A L M ++ + YNT+I + + VD A + E G P VVT +
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESG 309
+ LC+ GR+ EA+ ++ EM GC P+++TY+ L K + L + ++ SG
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
P + TY +++ + G L + + M + GC+P Y AL++ L G +D A
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240
Query: 370 KYDEEMFAKGLSA 382
+EM +K +A
Sbjct: 241 HIFKEMVSKDCTA 253
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 160/353 (45%), Gaps = 18/353 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN +ID L K + D + ++H M D + P+ TF + A A
Sbjct: 12 TYNILIDGLCKASKTDKASEMLHEMVDRGVT-PDTVTFNSIMDGLCKAGKFERAHSLLAV 70
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E + +Y L+ LC+ ++V A+ L E + GF + Y+++ G
Sbjct: 71 MAERNCRPSCCTYNTLISGLCKQQNVDRAKTL-VDEFVSSGF-----VPDVVTYSILADG 124
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + E +EM G +L +Y+ +D +CK+ K KA +L + + G D
Sbjct: 125 LCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPD 184
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
VV Y ++ + +D A+++ M + GC PSV+T +++ LC GRV EA+ +
Sbjct: 185 VVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFK 244
Query: 272 EMPKKGCVPDVITYHCFFR--C-LEKPREILGLFDRMIESGIR--PKMDTYVMLLRKFGR 326
EM K C D + Y C + +E + D GIR P +D Y L+ + +
Sbjct: 245 EMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD-----GIRGTPYIDVYNALMDGYCK 299
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
G L + V++ M GC P+ YN ++D L G +D A + E M + G
Sbjct: 300 EGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAG 352
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 173/379 (45%), Gaps = 15/379 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A+ +A E + + D T T T+NS++D L K +F+ + +L+ M + P
Sbjct: 21 CKASKTDKASEMLHEM-VDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCR-P 78
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ + V+ A ++ G + D V+Y L D LC+ + EA EL
Sbjct: 79 SCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELV 138
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+ N LV YN ++ G K S K E E + G V D+ +Y+I +
Sbjct: 139 KEMSGNGCTPNLV------TYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIV 192
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D +CK G+ KA+K+ + M K+G V+ Y ++ + + VD A +++EM C
Sbjct: 193 DGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCT 252
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGL 301
+ +++ C++ R +EA V+ + +G P + Y+ C E + EI +
Sbjct: 253 ADALAYVSLVNGYCKSSRTKEAQKVVDGI--RG-TPYIDVYNALMDGYCKEGRLDEIPNV 309
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
F+ M G P + TY +++ + G + F + M GC PD +YN ++D L
Sbjct: 310 FEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFK 369
Query: 362 KGMLDMARKYDEEMFAKGL 380
AR+ ++M G+
Sbjct: 370 ASKPKEARQVLDQMIQAGI 388
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 163/375 (43%), Gaps = 16/375 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A+ ++A E + + F TY ++D L K D + ++ M + P
Sbjct: 161 CKASKTEKAYELLETLVSS-GFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCT-P 218
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKL-DEFGLKDEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ + + V+EA F ++ + D ++Y +LV+ C+ EAQ++
Sbjct: 219 SVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKV- 277
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
G+ +YN ++ G+ K + +E+M RG V ++ +Y+I M
Sbjct: 278 --------VDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVM 329
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D +CK GK +A + M G DVV+YN +I + + A +V +M + G
Sbjct: 330 DGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIP 389
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGL 301
P VT NT++ C+ R +A +L M K G PD +TY+ L + + L
Sbjct: 390 PDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYEL 449
Query: 302 FDRMIESG-IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
M+ +G + TY ++ + + G L+ ++ M G + YN +D L
Sbjct: 450 MHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLC 509
Query: 361 DKGMLDMARKYDEEM 375
+G LD A EM
Sbjct: 510 KEGRLDEASSLLSEM 524
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 150/336 (44%), Gaps = 14/336 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+YN +ID L K + + ++ +M P+ T+ + ++ ++A+G
Sbjct: 359 SYNIIIDGLFKASKPKEARQVLDQMI-QAGIPPDAVTYNTLMAQFCKEERFDDAVGILKN 417
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + G+ D V+Y L+ L + + +A EL +N G V ++ YN I+
Sbjct: 418 MIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRN----GCV-VSACTTYNTIIDR 472
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + + M GV + +Y+I++D +CK G+ +A L EM D
Sbjct: 473 LCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL---RD 529
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREM-GCQPSVVTCNTVIKLLCENGRVREAYAVL 270
V+Y TVI + +E +D A ++ REM + G + T N +I + R+ EA +L
Sbjct: 530 EVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLL 589
Query: 271 AEMPKKGCVPDVITYHCFFRC---LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
M ++GC P VITY+ C L+K + LFD M GI +Y +L+
Sbjct: 590 ELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQ 649
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
G + V ++M C D+ L AL +G
Sbjct: 650 GRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQG 685
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 149/367 (40%), Gaps = 44/367 (11%)
Query: 55 HRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV-DALCE 113
++ D P + + Y ++E F + G + N+V D LC+
Sbjct: 275 QKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCK 334
Query: 114 YKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGV 173
+ V EA F +++ +G V YN+I+ G FK S + R+ ++M + G+
Sbjct: 335 HGKVDEA----FPFLESMHSAGCVP--DVVSYNIIIDGLFKASKPKEARQVLDQMIQAGI 388
Query: 174 VKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMR 233
D +Y+ M CK + AV + K M K G+ D V YNT+I + + + A
Sbjct: 389 PPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYE 448
Query: 234 VYREMREMGCQPSVVTC-NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
+ EM GC S T NT+I LC+ G +++A ++ M G + +TY+ F L
Sbjct: 449 LMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRL 508
Query: 293 EKPRE-----------------------ILGL-----FDRMIE--------SGIRPKMDT 316
K I+GL DR + G+ T
Sbjct: 509 CKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHT 568
Query: 317 YVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
+ +L+ F + L + + M + GCSP YN ++ L +D A + +EM
Sbjct: 569 FNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMA 628
Query: 377 AKGLSAK 383
+G+ A
Sbjct: 629 VRGIVAS 635
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 170/362 (46%), Gaps = 34/362 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWN----LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
TYN V+ + K + W L+ MK++ P+ T+ + L EA
Sbjct: 191 TYNVVLHVYSKM---AVPWKEVVELVASMKEH-GVAPDRYTYNTLISCCRRRALYKEAAQ 246
Query: 89 TFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
F+++ G + D+V++ +L+D + + EA E+ E + VG V YN
Sbjct: 247 VFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEV-IQEMERVGCPPSV-----VTYNS 300
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++ + K + +EM+ +G+ D+ +Y+ + + ++GK A+ Y EM + G
Sbjct: 301 LISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNG 360
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
K ++ YN +I+ GV M V+ E R G P +VT NT++ + +NG E
Sbjct: 361 CKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVS 420
Query: 268 AVLAEMPKKGCVPDVITY----HCFFRCLEKPREILGLFD-------RMIESGIRPKMDT 316
V EM K G +P+ TY + RC GLFD RM+E+GI P + T
Sbjct: 421 GVFKEMKKAGYIPERDTYVSLISSYSRC--------GLFDLAMQIYKRMMEAGIYPDVST 472
Query: 317 YVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
Y +L R G ++ +MEE C PDE++Y++L+ A + LD + ++++
Sbjct: 473 YNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIY 532
Query: 377 AK 378
++
Sbjct: 533 SE 534
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 127/275 (46%), Gaps = 39/275 (14%)
Query: 145 YNMILRGWFKMSW-WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
YN++L + KM+ W + E M + GV D ++Y+ + + +A +++ EM
Sbjct: 192 YNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEM 251
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
K G + D V +N+++ G + D A+ V +EM +GC PSVVT N++I ++G +
Sbjct: 252 KASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLL 311
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLE--------------------KPR------- 296
+A A+ EM KG PDV+TY L+ KP
Sbjct: 312 EQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNAL 371
Query: 297 -----------EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
E++ +FD +G P + T+ LL FG+ G V V+K+M++ G
Sbjct: 372 IKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGY 431
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
P+ Y +L+ + G+ D+A + + M G+
Sbjct: 432 IPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGI 466
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 110/259 (42%), Gaps = 39/259 (15%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK--------- 195
Y ++ + + + + M GV + +Y++ + + K PWK
Sbjct: 157 YTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASM 216
Query: 196 ---------------------------AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV 228
A +++ EMK G + D V +N+++ G +
Sbjct: 217 KEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRH 276
Query: 229 DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
D A+ V +EM +GC PSVVT N++I ++G + +A A+ EM KG PDV+TY
Sbjct: 277 DEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTL 336
Query: 289 FRCLEKPREILGL---FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
L++ +I +D M+ +G +P + TY L++ G G + V+ + G
Sbjct: 337 ISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGF 396
Query: 346 SPDEFAYNALVDALIDKGM 364
PD +N L+ G+
Sbjct: 397 VPDIVTWNTLLAVFGQNGL 415
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 10/233 (4%)
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
E+ GV+ + + +M ++G+ +A L D AY ++ A +
Sbjct: 113 ELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPGP----DAGAYTALVSAFSRAG 168
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV-REAYAVLAEMPKKGCVPDVITY 285
A+ V+R M + G QP++VT N V+ + + +E ++A M + G PD TY
Sbjct: 169 RFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTY 228
Query: 286 HCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE 342
+ C + +E +FD M SG P T+ LL +G+ V ++ME
Sbjct: 229 NTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMER 288
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+GC P YN+L+ + + G+L+ A +EM KG+ KP T L+ G
Sbjct: 289 VGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGM--KPDVVTYTTLISG 339
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/446 (21%), Positives = 175/446 (39%), Gaps = 86/446 (19%)
Query: 11 WKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
+K A + F+ ++ F T+NS++D+ GK D + +I M + P+ T+
Sbjct: 241 YKEAAQVFDEMKAS-GFEPDKVTFNSLLDVYGKARRHDEAIEVIQEM-ERVGCPPSVVTY 298
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDAL------------------ 111
+ YV L+ +A+ +++ G+K D V+Y L+ L
Sbjct: 299 NSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVR 358
Query: 112 -------CEYKHVIEAQEL---------CFGENKNVGFSGLVEMNKTKIYNMILRGWFKM 155
C Y +I+ + F E ++ GF + +N +L + +
Sbjct: 359 NGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGF-----VPDIVTWNTLLAVFGQN 413
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
+ ++EM K G + + +Y + + G A+++YK M + GI DV Y
Sbjct: 414 GLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTY 473
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI--------------------- 254
N V+ A+ + A +++ EM E C+P + ++++
Sbjct: 474 NAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYS 533
Query: 255 -----------KLLCENGRVR---EAYAVLAEMPKKGCVPDV------ITYHCFFRCLEK 294
L+ N +V EA E+ +K C D+ ++ + R + K
Sbjct: 534 ERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRK 593
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
+IL L M ES I TY L+ + R G + +++ G PD ++YN
Sbjct: 594 VEKILSL---MKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNT 650
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGL 380
++ A KG + A + EM GL
Sbjct: 651 VIYAYGRKGQMKEASRLFSEMKCSGL 676
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 71/131 (54%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ + ++ KC E+ GV D +SY+ + + G+ +A +L+ EMK
Sbjct: 613 YNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMK 672
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
G+K DVV YN +++ + + A+ + R M GC+P+ T N++++ C NG++
Sbjct: 673 CSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLT 732
Query: 265 EAYAVLAEMPK 275
+A ++ +P+
Sbjct: 733 DAKIFVSNLPQ 743
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 136/316 (43%), Gaps = 11/316 (3%)
Query: 32 DTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
DTY S+I + FDL+ + RM + P+ +T+ + +A F
Sbjct: 436 DTYVSLISSYSRCGLFDLAMQIYKRMME-AGIYPDVSTYNAVLSALARGGRWEQAEKLFA 494
Query: 92 KLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
+++E K DE SY +L+ A K + + + L + +S +E + + ++L
Sbjct: 495 EMEERDCKPDEYSYSSLLHAYANAKRLDKMKALS-----DDIYSERIEPHNWLVKTLVLV 549
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
K++ + + + E+ ++ D++ + + I K+ K K+ MK+ I +
Sbjct: 550 NS-KVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINL 608
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
YN+++ + + E++ G +P + NTVI G+++EA +
Sbjct: 609 SAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLF 668
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
+EM G PDV+TY+ F + E + L M+ G +P TY ++ + R
Sbjct: 669 SEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRN 728
Query: 328 GFLRPVFVVWKKMEEL 343
G L + + +L
Sbjct: 729 GKLTDAKIFVSNLPQL 744
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 149/386 (38%), Gaps = 66/386 (17%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++I + G +F + + + +P+ T+ + + L +E G F +
Sbjct: 367 TYNALIKMHGVRGKFPEMMAVFDEFR-SAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKE 425
Query: 93 LDEFG----------LKDEVSYCNLVD-ALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
+ + G L S C L D A+ YK ++EA G +V
Sbjct: 426 MKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEA-----GIYPDVS--------- 471
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM----------------- 184
YN +L + W + + + EM++R D +SYS +
Sbjct: 472 --TYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSD 529
Query: 185 DIMCKSGKP--W----------------KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
DI + +P W +A K + E+++K +D+ N ++ G +
Sbjct: 530 DIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNR 589
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
V ++ M+E S T N+++ + G + +L E+ G PD +Y+
Sbjct: 590 MVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYN 649
Query: 287 CFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
+ +E LF M SG++P + TY + ++ + + + M
Sbjct: 650 TVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQ 709
Query: 344 GCSPDEFAYNALVDALIDKGMLDMAR 369
GC P+E YN++V+ G L A+
Sbjct: 710 GCKPNERTYNSIVEGYCRNGKLTDAK 735
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
G + A RE+ G T I+++ GR+ EA A+L P PD Y
Sbjct: 103 GAELAAVAARELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPG----PDAGAYT 158
Query: 287 CFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL-RPVFVVWKKMEE 342
+ R+ + +F RM++SG++P + TY ++L + + + V + M+E
Sbjct: 159 ALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKE 218
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G +PD + YN L+ + + A + +EM A G
Sbjct: 219 HGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGF 256
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 167/386 (43%), Gaps = 46/386 (11%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF-- 90
+Y I +LG+ F+ ++ ++ +M+D P+ T ++ + A V++A F
Sbjct: 253 SYTICIRVLGQAGRFEEAYKILQKMEDEGCK-PDVVTNTVLIQILCDAGRVSDAKDVFWK 311
Query: 91 ---------------------------------NKLDEFGLKDEV-SYCNLVDALCEYKH 116
N + G D V +Y +VDALC+
Sbjct: 312 MKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGR 371
Query: 117 VIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
V EA ++ F + K G + YN ++ G+ K E + M+ G +
Sbjct: 372 VDEASDV-FDQMKQKGIE-----PQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPN 425
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
++Y ++++ KSG+ KA+K Y+ MK KGI DVVA N V+ ++ S + A RV+
Sbjct: 426 GYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFH 485
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP- 295
E++ +G P +T +IK + EA V +EM + CVPDV+ + L K
Sbjct: 486 ELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAG 545
Query: 296 --REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
E +F + E + P TY LL GR G ++ V + ++M P+ YN
Sbjct: 546 RGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYN 605
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKG 379
++D L G ++ A M KG
Sbjct: 606 TVLDCLCKNGEVNYALGMLYNMTMKG 631
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 159/362 (43%), Gaps = 27/362 (7%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKD---NPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
Y ++ IL F + L +H +K+ P S + ++F + + + + +++
Sbjct: 670 YTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSI--- 726
Query: 91 NKLDEFG--------LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKT 142
EF L D+ L+ LC+ K +EA EL F L KT
Sbjct: 727 ----EFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELV------KKFESLGVSLKT 776
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
YN ++ G + + EM + G D +Y++ +D M KS + +K+ KE
Sbjct: 777 GSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKE 836
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M KG + V YNT+I + S+ + AM +Y ++ G P+ T ++ L ++G+
Sbjct: 837 MHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGK 896
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVM 319
+ +A + EM GC P+ Y+ +R ++ LF M++ GI P + +Y +
Sbjct: 897 IEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTV 956
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L+ G L ++++ ELG PD YN L+ L G L+ A +M G
Sbjct: 957 LIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSG 1016
Query: 380 LS 381
++
Sbjct: 1017 IA 1018
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 125/237 (52%), Gaps = 6/237 (2%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M + G+V + ++Y+ + + KSG +A+++YK M GI V Y+ ++ A G +
Sbjct: 173 MKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKRD- 231
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
V+ + + REM + G +P+V + I++L + GR EAY +L +M +GC PDV+T
Sbjct: 232 VETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTV 291
Query: 288 FFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
+ L + + +F +M S +P TY+ LL K G G R V +W M+ G
Sbjct: 292 LIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADG 351
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
+ + AY A+VDAL G +D A ++M KG+ +P++ L+ G L ++
Sbjct: 352 YNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGI--EPQQYSYNSLISGFLKADR 406
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 144/294 (48%), Gaps = 15/294 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRM--KDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
TYN ++D +GK + + M K S+ + T+ + V + ++ EAM +
Sbjct: 813 TYNLILDAMGKSMRIEDMLKVQKEMHCKGYEST---YVTYNTIISGLVKSKMLYEAMDLY 869
Query: 91 NKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
KL G +Y L+D L + + +A++L F E + G + N+ IYN++L
Sbjct: 870 YKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDL-FDEMLDYG----CKPNRA-IYNILL 923
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G+ K E ++ M +G+ D+ SY++ + +C +G+ ++ ++++ + G++
Sbjct: 924 NGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLE 983
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
D++ YN +I +G S ++ A+ ++ +M + G P++ T N++I L + G+ EA +
Sbjct: 984 PDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKM 1043
Query: 270 LAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVML 320
E+ K G P+V TY+ + + +MI G P TY+ L
Sbjct: 1044 YEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQL 1097
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 137/306 (44%), Gaps = 10/306 (3%)
Query: 78 VTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGL 136
V +L++ A G F+++ G DE +Y ++DA+ + + + ++ K + G
Sbjct: 787 VDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKV----QKEMHCKGY 842
Query: 137 VEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKA 196
T YN I+ G K + + + ++ G +Y +D + K GK A
Sbjct: 843 ESTYVT--YNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDA 900
Query: 197 VKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKL 256
L+ EM G K + YN ++ ++ + +++ M + G P + + +I
Sbjct: 901 EDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGA 960
Query: 257 LCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPK 313
LC GR+ ++ + ++ + G PD+ITY+ L + E + LF+ M +SGI P
Sbjct: 961 LCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPN 1020
Query: 314 MDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDE 373
+ TY L+ G+ G +++++ + G P+ F YNAL+ G D A
Sbjct: 1021 LYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYG 1080
Query: 374 EMFAKG 379
+M G
Sbjct: 1081 QMIVGG 1086
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 174/400 (43%), Gaps = 37/400 (9%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D + +E +N ++ D + Y +V+D L + D + ++ +MK P +
Sbjct: 336 DSRSVIEIWNAMKAD-GYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIE-PQQYS 393
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE----VSYCNLVDALCEYKHVIEAQEL-- 123
+ + ++ A +N A+ FN ++ G V + N E I+ EL
Sbjct: 394 YNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMK 453
Query: 124 ----------------CFGENKNVGFSGLV--EMNKTKI------YNMILRGWFKMSWWG 159
++ +G + V E+ + Y M+++ K S
Sbjct: 454 SKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNAD 513
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+ + + EM + V D+ + + +D + K+G+ +A K++ E+K+ + YNT++
Sbjct: 514 EAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLL 573
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
+G V M + EM P+++T NTV+ LC+NG V A +L M KGC+
Sbjct: 574 AGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCM 633
Query: 280 PDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVV 336
PD+ +Y+ L ++ E +F +M + + P T +L F + G +
Sbjct: 634 PDLSSYNTALHGLVKEDRLTEAFRIFCQM-KKVLAPDYTTLCTILPSFVKNGLMNEALHT 692
Query: 337 WKK-MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
K+ + + G D ++++L++ ++ + ++ + ++ E +
Sbjct: 693 LKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENI 732
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 145/335 (43%), Gaps = 21/335 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN+V+D L K E + + +++ M +P+ +++ V + EA F +
Sbjct: 603 TYNTVLDCLCKNGEVNYALGMLYNMTMK-GCMPDLSSYNTALHGLVKEDRLTEAFRIFCQ 661
Query: 93 LDEFGLKDEVSYCNLVDALC------EYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYN 146
+ + D + C ++ + E H ++ L G + ++
Sbjct: 662 MKKVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKAD-----------RSSFH 710
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++ G K + K EF E + ++ D S + +CKS K +A +L K+ +
Sbjct: 711 SLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESL 770
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
G+ + +YN +I + +D A ++ EM+ +GC P T N ++ + ++ R+ +
Sbjct: 771 GVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDM 830
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRK 323
V EM KG +TY+ L K + E + L+ +++ G P TY LL
Sbjct: 831 LKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDG 890
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+ G + ++ +M + GC P+ YN L++
Sbjct: 891 LLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNG 925
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 158/360 (43%), Gaps = 21/360 (5%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
+ A+E + + TD + TY+ ++ GK + W L+ M+D+ PN ++
Sbjct: 199 REAMEVYKVMATD-GIVPSVRTYSVLMLAFGKRDVETVVW-LLREMEDHGVK-PNVYSYT 255
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKN 130
I + A EA K+++ G K D V+ L+ LC+ V +A+++ + +
Sbjct: 256 ICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKAS 315
Query: 131 VGFSGLVEMNKTKIYNMILRGWFKMSWWGKCR---EFWEEMDKRGVVKDLHSYSIYMDIM 187
+ ++ + L K G R E W M G ++ +Y+ +D +
Sbjct: 316 -------DQKPDRVTYITL--LDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDAL 366
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
C+ G+ +A ++ +MK+KGI+ +YN++I ++ ++ A+ ++ M G P+
Sbjct: 367 CQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNG 426
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIE 307
T I ++G +A M KG VPDV+ + L K LG+ R+
Sbjct: 427 YTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGR-LGMAKRVFH 485
Query: 308 S----GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
G+ P TY M+++ + V+ +M E C PD A N+L+D L G
Sbjct: 486 ELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAG 545
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 2/199 (1%)
Query: 173 VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM 232
+V S + +++M G+ +++ M+++ +K +V + T+ R++G+ G+ A
Sbjct: 108 IVHTTESCNYMLELMRAHGRVRDMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAP 167
Query: 233 RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
M+E G + T N +I L ++G REA V M G VP V TY
Sbjct: 168 VALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAF 227
Query: 293 EK--PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF 350
K ++ L M + G++P + +Y + +R G+ G + + +KME+ GC PD
Sbjct: 228 GKRDVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVV 287
Query: 351 AYNALVDALIDKGMLDMAR 369
L+ L D G + A+
Sbjct: 288 TNTVLIQILCDAGRVSDAK 306
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 157/390 (40%), Gaps = 30/390 (7%)
Query: 8 ANDWKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
A++ A++ F+ +ET C NS+ID L K + +W + H +K+ + P
Sbjct: 509 ASNADEAMKVFSEMIETRC--VPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEM-NLDPT 565
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCF 125
T+ + V E M +++ ++Y ++D LC+ V A + +
Sbjct: 566 DCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLY 625
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
N+ G M YN L G K + + +M K+ + D + +
Sbjct: 626 ----NMTMKGC--MPDLSSYNTALHGLVKEDRLTEAFRIFCQM-KKVLAPDYTTLCTILP 678
Query: 186 IMCKSGKPWKAVKLYKE-MKKKGIKMDVVAYNT----VIRAVGVSEGVDFAMRVYRE--- 237
K+G +A+ KE + + G K D ++++ +++ G+ + ++FA +
Sbjct: 679 SFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRIL 738
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
+ + P +I+ LC++ + EA+ ++ + G +Y+ L
Sbjct: 739 LDDFFLSP-------LIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENL 791
Query: 298 I---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
I GLF M G P TY ++L G+ + + V K+M G YN
Sbjct: 792 IDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNT 851
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
++ L+ ML A ++ ++G S P
Sbjct: 852 IISGLVKSKMLYEAMDLYYKLMSEGFSPTP 881
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 166/372 (44%), Gaps = 23/372 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY++ I+ K +FD + + M+ ++ N T+ +M + V EA G +
Sbjct: 245 TYSTFIEAHCKARDFDAAKKVFEEMRRRDCAM-NEVTYNVMISGLCRSGAVEEAFGFKEE 303
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL-----CFGENKNVGFSGLVEMNKTKIYN 146
+ ++GL D +Y L++ LC+ + EA+ L C G N+ +Y
Sbjct: 304 MVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNI-----------VVYG 352
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++ G+ K + + +EM GV + Y + +CK G+ +A KL KEM K
Sbjct: 353 TLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKV 412
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
G++ D YN +++ D A + EMR G P+V + +I LC+NG +EA
Sbjct: 413 GLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEA 472
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRK 323
+L EM +G P+ Y K I ++M ++ + P + Y L++
Sbjct: 473 GNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKG 532
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAK 383
G + + ++++ G PDEF Y+ L+ G L+ A + +M GL K
Sbjct: 533 LSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGL--K 590
Query: 384 PREELGTKLVQG 395
P + T L++G
Sbjct: 591 PNADTYTDLLEG 602
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 106/216 (49%), Gaps = 3/216 (1%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M+ G++ D+++YS +++ CK+ A K+++EM+++ M+ V YN +I + S
Sbjct: 234 MEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 293
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
V+ A EM + G P T ++ LC+ R++EA A+L EM G P+++ Y
Sbjct: 294 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGT 353
Query: 288 F---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
F K E + MI +G++P Y L+R + G L + K+M ++G
Sbjct: 354 LVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVG 413
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
PD F YN L+ + D A + EM G+
Sbjct: 414 LRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGI 449
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 160/394 (40%), Gaps = 58/394 (14%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T TYN ++ + + D ++ L++ M+ N +PN ++ IM EA
Sbjct: 418 TFTYNPLMQGHFQQHDKDGAFELLNEMR-NSGILPNVYSYGIMINGLCQNGESKEAGNLL 476
Query: 91 NKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI----- 144
++ GLK + Y L+ H E N ++ L +M K +
Sbjct: 477 EEMISEGLKPNAFMYAPLI-----IGHSKEG-------NISLACEALEKMTKANVHPDLF 524
Query: 145 -YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
YN +++G + + E++ ++ KRG+V D +YS + CK+G KA +L ++M
Sbjct: 525 CYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQM 584
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
G+K + Y ++ S + + + M G +P VI+ L + +
Sbjct: 585 LNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENM 644
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVML 320
A+ VL E+ K G VPD+ Y L K ++ +GL D M + G+ P + Y L
Sbjct: 645 EVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNAL 704
Query: 321 LRKFGRWG---------------FLRP--------------------VFVVWKKMEELGC 345
+ F R G L P F ++K+M + G
Sbjct: 705 IDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGI 764
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+PD F YN L D L+ A EEMF +G
Sbjct: 765 APDAFVYNVLATGCSDAADLEQALFLTEEMFNRG 798
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 92/201 (45%), Gaps = 5/201 (2%)
Query: 198 KLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLL 257
KL M+ GI DV Y+T I A + D A +V+ EMR C + VT N +I L
Sbjct: 229 KLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGL 288
Query: 258 CENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKM 314
C +G V EA+ EM G PD TY L + +E L D M SG++P +
Sbjct: 289 CRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNI 348
Query: 315 DTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
Y L+ F + G F + K+M G P++ Y+ L+ L G L A K +E
Sbjct: 349 VVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKE 408
Query: 375 MFAKGLSAKPREELGTKLVQG 395
M GL +P L+QG
Sbjct: 409 MIKVGL--RPDTFTYNPLMQG 427
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 118/258 (45%), Gaps = 13/258 (5%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
DTY +++ K +++ +++ M + NH + I+ + + + A
Sbjct: 592 NADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNH-IYGIVIRNLSRSENMEVAFMV 650
Query: 90 FNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
++++ GL ++ Y +L+ LC+ + +A L K G+V YN +
Sbjct: 651 LTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIV------CYNAL 704
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G+ + + R ++ + +G+V + +Y+ +D CK+G A LYKEM +GI
Sbjct: 705 IDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGI 764
Query: 209 KMDVVAYNTVIRAVGVSEGVDF--AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
D YN + A G S+ D A+ + EM G +V NT++ C+ G+++E
Sbjct: 765 APDAFVYNVL--ATGCSDAADLEQALFLTEEMFNRG-YANVSLFNTLVHGFCKRGKLQET 821
Query: 267 YAVLAEMPKKGCVPDVIT 284
+L M + VP+ T
Sbjct: 822 EKLLHVMMDREIVPNAQT 839
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 92/217 (42%), Gaps = 5/217 (2%)
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+ +D K+G A ++ M G+ N +++ + ++ ++ ++ M
Sbjct: 178 VLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGA 237
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REI 298
G P V T +T I+ C+ A V EM ++ C + +TY+ L + E
Sbjct: 238 GILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEA 297
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
G + M++ G+ P TY L+ + L+ + +M G P+ Y LVD
Sbjct: 298 FGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDG 357
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+ +G A +EM + G+ +P + + L++G
Sbjct: 358 FMKEGKTAEAFDILKEMISAGV--QPNKIMYDNLIRG 392
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 153/301 (50%), Gaps = 20/301 (6%)
Query: 85 EAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK 143
+A+ FNK+ + +V ++ LVD C+ V EA KNV +++ K
Sbjct: 160 DAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEA--------KNVLAMMMIQGIKPG 211
Query: 144 I--YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
+ YN ++ G+F + K + + M + GV D+ SYSI ++ CK +A++L K
Sbjct: 212 VVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLK 271
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
EM K I +VV Y+++I + S + +A+++ EM + G P++VT ++++ LC+N
Sbjct: 272 EMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNH 331
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFR--C----LEKPREILGLFDRMIESGIRPKMD 315
+V A A+L +M +G P++ TY + C LE R++ F+ ++ G +
Sbjct: 332 QVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKV---FEDLLVKGHNLNVY 388
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
TY ++++ F G + KME+ GC P+ Y ++ +L K +MA K EM
Sbjct: 389 TYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEM 448
Query: 376 F 376
Sbjct: 449 I 449
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 172/372 (46%), Gaps = 24/372 (6%)
Query: 18 FNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSIPNHATFRIMFKR 76
FN++ +F+ +T +N+ + D + +L +R+ + NP+ P + F +
Sbjct: 25 FNFIP---YFSTSTTFHNNN--------DVDDAVSLFNRLLQQNPT--PPNIEFNKILGS 71
Query: 77 YVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSG 135
V + + + K++ G+K + CN L+++ C+ H+ A + + +G+
Sbjct: 72 LVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSV-LTKILKMGYKP 130
Query: 136 LVEMNKTKIYNMILRGWF--KMSWWGKCRE---FWEEMDKRGVVKDLHSYSIYMDIMCKS 190
T I + L G K GK ++ + +M + D+++++I +D CK
Sbjct: 131 NTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKE 190
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTC 250
G+ +A + M +GIK VV YN+++ + + V+ A ++ M ++G P + +
Sbjct: 191 GRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSY 250
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIE 307
+ +I C+ + EA +L EM K +P+V+TY L K +I L L D M +
Sbjct: 251 SILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHD 310
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
G P + TY +L + + + +M+ G P+ + Y L+ L G L+
Sbjct: 311 RGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLED 370
Query: 368 ARKYDEEMFAKG 379
ARK E++ KG
Sbjct: 371 ARKVFEDLLVKG 382
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 93/200 (46%), Gaps = 13/200 (6%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
AV L+ + ++ + +N ++ ++ S+ + + ++M G +P++V CN +I
Sbjct: 46 AVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILIN 105
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-----------KPREILGLF 302
C+ G + A++VL ++ K G P+ IT + + CL K ++ + LF
Sbjct: 106 SFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLF 165
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
++MI I P + T+ +L+ F + G ++ V M G P YN+L+D
Sbjct: 166 NKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLV 225
Query: 363 GMLDMARKYDEEMFAKGLSA 382
++ A+ M G+S
Sbjct: 226 KQVNKAKSIFNTMAQLGVSP 245
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 84/199 (42%), Gaps = 18/199 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+S+ID L K + + L+ M D PN T+ + H V+ A+ +
Sbjct: 284 TYSSLIDGLCKSGKISYALKLVDEMHDR-GQPPNIVTYSSILDALCKNHQVDNAIALLTQ 342
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQE-----LCFGENKNVGFSGLVEMNKTKIYN 146
+ G++ + +Y L+ LC+ + +A++ L G N NV Y
Sbjct: 343 MKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNV-----------YTYT 391
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++++G+ + + +M+ G + + +Y I + + K + A KL EM +
Sbjct: 392 VMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIET 451
Query: 207 GIKMDVVAYNTVIRAVGVS 225
V N +I ++ V+
Sbjct: 452 NFDGRVALTNDLIASIWVT 470
>gi|413938248|gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]
Length = 501
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 167/349 (47%), Gaps = 37/349 (10%)
Query: 48 DLSWNLIHRMKDN---PSSI----PNHA------TFRIMFKRYVTAHLVNE-AMGTFNKL 93
DL+ +L R++ SSI P H TF I+F+R+ +H + A+ F L
Sbjct: 106 DLALDLAARLRHPRQLTSSILALFPRHGLAFTPRTFPILFERFAMSHRRPDLAIRLFLSL 165
Query: 94 D-EFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
G+ ++ N L+DAL + + +A L + + YN + G
Sbjct: 166 HRSHGIAQDLPLFNSLLDALVKSRRASKAASLVRALEQRFPPDAVT-------YNTLADG 218
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG---- 207
W ++ + + +M + G+ +Y+I + +SG+ A + +MK++G
Sbjct: 219 WCRVKDTSRALDILRQMVESGIAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGSNDE 278
Query: 208 -IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
K DVV+Y TV+ +GV+ +D A +V+ EM GC+PS T N +I++ C+ G + +A
Sbjct: 279 NCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDA 338
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRK 323
AV +M +KG +P+V+TY R L K + L DRM G P + TY +L+R
Sbjct: 339 VAVFDDMVRKGYIPNVVTYTVLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYNVLIRY 398
Query: 324 FGRWGFLRP---VFVVWKKMEELGCSPDEFAYNALVDAL-IDKGMLDMA 368
G + +F K EE C P++ YN ++ A+ + K DMA
Sbjct: 399 SLEEGEIEKGLDLFETMSKGEE--CLPNQDTYNIIISAMFVRKRAEDMA 445
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 116/283 (40%), Gaps = 39/283 (13%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F TYN++ D + + + +++ +M ++ P AT+ I+ K + + + A
Sbjct: 205 FPPDAVTYNTLADGWCRVKDTSRALDILRQMVES-GIAPTKATYNIILKGFFRSGQLQHA 263
Query: 87 MGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYN 146
F ++ G DE ++V Y
Sbjct: 264 WDFFLQMKRRGSNDENCKPDVVS-----------------------------------YT 288
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
+L G K R+ ++EM G +Y+ + + CK G AV ++ +M +K
Sbjct: 289 TVLHGLGVAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDAVAVFDDMVRK 348
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
G +VV Y +IR + + V AM++ M+ GC+P+V T N +I+ E G + +
Sbjct: 349 GYIPNVVTYTVLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYNVLIRYSLEEGEIEKG 408
Query: 267 YAVLAEMPK-KGCVPDVITYHCFFRCL--EKPREILGLFDRMI 306
+ M K + C+P+ TY+ + K E + + RM+
Sbjct: 409 LDLFETMSKGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMV 451
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 185/413 (44%), Gaps = 47/413 (11%)
Query: 14 ALEFFNWVETDCHFTHTTD--TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
A+ F+WV F + +I +LGK + + ++++ ++ + + +A +
Sbjct: 163 AMSVFSWVREREDFESVLNCSVVAVIITMLGKEGKVSAASSILNNLRKDGFDLDVYA-YT 221
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNV 131
+ Y + +A+ F K++E G K + N++ L Y + G +
Sbjct: 222 SLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVI--LNVYGKMGMPWSKISGLVHGM 279
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
SG+ + T YN ++ + S + + + +EEM G D +++ +D+ KS
Sbjct: 280 KSSGVAPDDYT--YNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSR 337
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG---------------VSEGV-------- 228
+P +A+++ KEM+ G +V YN++I A V +G+
Sbjct: 338 RPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYT 397
Query: 229 ------------DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
+ AMR++ EMR GC+P++ T N +IK+ GR E V E+
Sbjct: 398 TLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEIC 457
Query: 277 GCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
C PD++T++ + E+ G+F M +G P+ DT+ L+ + R G +
Sbjct: 458 NCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQA 517
Query: 334 FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPRE 386
V+K+M E G +PD +YNA++ AL G+ + + K EM K KP E
Sbjct: 518 MAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEM--KDGRCKPNE 568
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 131/295 (44%), Gaps = 12/295 (4%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F DT+N++I + F + + RM + P+ +++ + L ++
Sbjct: 494 FVPERDTFNTLISAYSRCGSFQQAMAVYKRMLE-AGVTPDLSSYNAVLAALARGGLWEQS 552
Query: 87 MGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
F ++ + K +E++YC+L+ A K + L +SGL E +
Sbjct: 553 EKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLA-----EEIYSGLTEPVPVLLK 607
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
++L K + +EE+ K+G DL + + + I + KA ++ M +
Sbjct: 608 TLVLVNS-KCDLLMETEHAFEELKKKGS-PDLSTLNAMIAIYGRRQMVAKANEILNFMNE 665
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G + YN+++ SE + + V +E+ G +P +++ NTVI C NGR+++
Sbjct: 666 SGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKD 725
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTY 317
A + + M G VPDVITY+ F + +G+ MI+ G + +TY
Sbjct: 726 ASRIFSYMKTYGLVPDVITYNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTY 780
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 160/399 (40%), Gaps = 59/399 (14%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F+ T+N+++D+ GK + ++ M+ + S P+ T+ + Y L+ EA
Sbjct: 319 FSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFS-PSIVTYNSLISAYARDGLLREA 377
Query: 87 MGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVG-------FSGLVE 138
M +++ E G+K +V +Y L+ E + E FGE + G F+ L++
Sbjct: 378 MELKDQMVEKGIKPDVFTYTTLLSGF-EKAGMDEPAMRIFGEMRAAGCKPNICTFNALIK 436
Query: 139 MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK 198
M+ RG F + + +EE++ D+ +++ + + ++G +
Sbjct: 437 MHGN-------RGRF-----AEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSG 484
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
++KEMK+ G + +NT+I A AM VY+ M E G P + + N V+ L
Sbjct: 485 VFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALA 544
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI--LGLFDRMIESGI------ 310
G ++ V AEM C P+ +TY +EI + I SG+
Sbjct: 545 RGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPV 604
Query: 311 -----------------------------RPKMDTYVMLLRKFGRWGFLRPVFVVWKKME 341
P + T ++ +GR + + M
Sbjct: 605 LLKTLVLVNSKCDLLMETEHAFEELKKKGSPDLSTLNAMIAIYGRRQMVAKANEILNFMN 664
Query: 342 ELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
E G SP YN+L+ + + + +E+ AKGL
Sbjct: 665 ESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGL 703
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 116/265 (43%), Gaps = 15/265 (5%)
Query: 28 THTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAM 87
T +YN+V+ L + ++ S + MKD PN T+ + Y + + E M
Sbjct: 530 TPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCK-PNELTYCSLLHAYANSKEI-ERM 587
Query: 88 GTFNKLDEFGLKDEVSYC----NLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK 143
T + GL + V LV++ C+ ++ E F E K G L +N
Sbjct: 588 HTLAEEIYSGLTEPVPVLLKTLVLVNSKCD---LLMETEHAFEELKKKGSPDLSTLNA-- 642
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
++ + + K E M++ G L +Y+ M + +S ++ ++ KE+
Sbjct: 643 ----MIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEI 698
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
KG+K D+++YNTVI A + + A R++ M+ G P V+T NT + +
Sbjct: 699 LAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVPDVITYNTFVASYAADSLF 758
Query: 264 REAYAVLAEMPKKGCVPDVITYHCF 288
+A V+ M K GC + TY+
Sbjct: 759 EDAIGVVRYMIKHGCKRNQNTYNSI 783
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 22/188 (11%)
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV---IKLLCENGRV 263
+ MDV+ +I+ +G + D AM V+ +RE SV+ C+ V I +L + G+V
Sbjct: 142 SLSMDVLG---IIKGLGFYKKCDMAMSVFSWVREREDFESVLNCSVVAVIITMLGKEGKV 198
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLE---KPREILGLFDRMIESGIRPKMDTYVML 320
A ++L + K G DV Y + R+ + +F +M E G +P + TY ++
Sbjct: 199 SAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVI 258
Query: 321 LRKFGRWGFLRPVFVVWKK-------MEELGCSPDEFAYNALVDALIDKGMLDMARKYDE 373
L +G+ G + W K M+ G +PD++ YN L+ + + A + E
Sbjct: 259 LNVYGKMG------MPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFE 312
Query: 374 EMFAKGLS 381
EM G S
Sbjct: 313 EMKLSGFS 320
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/345 (18%), Positives = 134/345 (38%), Gaps = 50/345 (14%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELC 124
PN TF + K + E M F +++ ++ N + A+ +
Sbjct: 426 PNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGV 485
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F E K GF + + +N ++ + + + + ++ M + GV DL SY+ +
Sbjct: 486 FKEMKRAGF-----VPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVL 540
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA------------------VGVSE 226
+ + G ++ K++ EMK K + + Y +++ A G++E
Sbjct: 541 AALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTE 600
Query: 227 GVDFAMRV-----------------YREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
V ++ + E+++ G P + T N +I + V +A +
Sbjct: 601 PVPVLLKTLVLVNSKCDLLMETEHAFEELKKKG-SPDLSTLNAMIAIYGRRQMVAKANEI 659
Query: 270 LAEMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRK 323
L M + G P + TY H E+ E+L ++ G++P + +Y ++
Sbjct: 660 LNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVL---KEILAKGLKPDLISYNTVIFA 716
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
+ R G ++ ++ M+ G PD YN V + + + A
Sbjct: 717 YCRNGRMKDASRIFSYMKTYGLVPDVITYNTFVASYAADSLFEDA 761
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 120/238 (50%), Gaps = 6/238 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN+++ G+ K G+ + +D+ V D+ +Y+ + +C SGK +A+++
Sbjct: 187 YNVLISGYCK---SGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQL 243
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+K DV+ Y +I A GV AM++ EMR G +P VVT N +I +C+ GR+
Sbjct: 244 QKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLD 303
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLL 321
EA L MP GC P+VIT++ R + + L M+ G P + T+ +L+
Sbjct: 304 EAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILI 363
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R G L + +KM GC+P+ +YN L+ + +D A +Y + M ++G
Sbjct: 364 NFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG 421
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 120/241 (49%), Gaps = 5/241 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ILR + E + ++ D+ +Y+I ++ CK +A+KL EM+
Sbjct: 219 YNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMR 278
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
KG K DVV YN +I + +D A++ M GCQP+V+T N +++ +C GR
Sbjct: 279 NKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWM 338
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG----LFDRMIESGIRPKMDTYVML 320
+A +L++M +KGC P V+T++ L + + +LG + ++M G P +Y L
Sbjct: 339 DAEKLLSDMLRKGCSPSVVTFNILINFLCR-QGLLGRAIDILEKMPMHGCTPNSLSYNPL 397
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
L F + + M GC PD YN L+ AL G +D+A + ++ +KG
Sbjct: 398 LHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGC 457
Query: 381 S 381
S
Sbjct: 458 S 458
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 168/387 (43%), Gaps = 14/387 (3%)
Query: 6 CYANDWKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C + K+A+E + ++ +C+ TY +I+ K + L+ M+ N S
Sbjct: 227 CDSGKLKQAMEVLDRQLQKECY--PDVITYTILIEATCKESGVGQAMKLLDEMR-NKGSK 283
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV-DALCEYKHVIEAQEL 123
P+ T+ ++ ++EA+ N + +G + V N++ ++C ++A++L
Sbjct: 284 PDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKL 343
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ G S V +N+++ + G+ + E+M G + SY+
Sbjct: 344 -LSDMLRKGCSPSVVT-----FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPL 397
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ CK K +A++ M +G D+V YNT++ A+ VD A+ + ++ GC
Sbjct: 398 LHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGC 457
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE---KPREILG 300
P ++T NTVI L + G+ A +L EM +KG PD+ITY L K E +
Sbjct: 458 SPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIK 517
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
F + GIRP TY ++ + M C P E Y L++ +
Sbjct: 518 FFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIA 577
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPREE 387
+G+ A E+ ++GL K E
Sbjct: 578 YEGLAKEALDLLNELCSRGLVKKSSAE 604
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 6/222 (2%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+F E M RG + D+ + + C+ GK KA + + +++ G DV+ YN +I
Sbjct: 135 KFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGY 194
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
S +D A++V + M P VVT NT+++ LC++G++++A VL +K C PDV
Sbjct: 195 CKSGEIDNALQV---LDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDV 251
Query: 283 ITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
ITY K + + L D M G +P + TY +L+ + G L
Sbjct: 252 ITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNN 311
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
M GC P+ +N ++ ++ G A K +M KG S
Sbjct: 312 MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCS 353
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 8/143 (5%)
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGL 301
P ++ C ++I+ C G+ ++A V+ + + G VPDVITY+ K EI L +
Sbjct: 147 PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV 206
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
DRM + P + TY +LR G L+ V + + C PD Y L++A
Sbjct: 207 LDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCK 263
Query: 362 KGMLDMARKYDEEMFAKGLSAKP 384
+ + A K +EM KG +KP
Sbjct: 264 ESGVGQAMKLLDEMRNKG--SKP 284
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--C-LEKPREILGLFDRMIESGI 310
++ L NG + + + L M +G +PD+I R C + K ++ + + + +SG
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
P + TY +L+ + + G + V +M +PD YN ++ L D G L A +
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAME 237
Query: 371 YDEEMFAK 378
+ K
Sbjct: 238 VLDRQLQK 245
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 171/395 (43%), Gaps = 25/395 (6%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D K AL+FF W + F HTT++Y ++ ++ + + + + + + N
Sbjct: 83 DPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFPV 142
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENK 129
I + T ++ G F+ L E + EA E CF +
Sbjct: 143 CNIFDMLWSTRNICVSGSGVFDVL--------------FSVFVELGLLEEANE-CFSRMR 187
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
N + K + N +L K R+F+ +M G+ + +Y++ +D +CK
Sbjct: 188 N-----FRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCK 242
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
G + +L+ +M++ G+ DVV YN++I G ++ ++ EM+++GC P ++T
Sbjct: 243 EGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIIT 302
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMI 306
N +I C+ ++ A+ +EM G P+V+TY K + G L M
Sbjct: 303 YNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMR 362
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
+G+ P TY L+ + G L + + M + G + Y AL+D L G +
Sbjct: 363 RTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMI 422
Query: 367 MARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
A + M G+S P +++ T LV G + E+
Sbjct: 423 EAEEVFRSMLKDGIS--PNQQVYTALVHGYIKAER 455
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 171/386 (44%), Gaps = 20/386 (5%)
Query: 4 LSCYANDWK--RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
++CY K RA E+F+ ++ + TY+++ID K + L+ M+
Sbjct: 307 INCYCKFEKMPRAFEYFSEMKNN-GLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMR-RT 364
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA 120
+PN T+ + A + EA N + + G+K + V+Y L+D LC+ +IEA
Sbjct: 365 GLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEA 424
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+E+ F G S ++Y ++ G+ K + ++M + + DL Y
Sbjct: 425 EEV-FRSMLKDGISP-----NQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILY 478
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ C K + + +EMK +GI + V T+I A + A+ ++EM++
Sbjct: 479 GSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQD 538
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCLEK 294
+G + ++VT +I LCE G V A M G P+V Y C C+E
Sbjct: 539 VGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIES 598
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
++ LFD M G+ P + + L+ + G L+ V+ +M EL D Y +
Sbjct: 599 AKK---LFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTS 655
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGL 380
LV G L ARK+ EM KG+
Sbjct: 656 LVSGFSQCGELHQARKFFNEMIEKGI 681
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 170/370 (45%), Gaps = 15/370 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS+ID GK + +L + MKD +P+ T+ + Y + A F++
Sbjct: 267 TYNSLIDGYGKVGSLEEVASLFNEMKD-VGCVPDIITYNGLINCYCKFEKMPRAFEYFSE 325
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ GLK + V+Y L+DA C+ + A +L + +GL+ T Y ++
Sbjct: 326 MKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRR----TGLLPNEFT--YTSLIDA 379
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + + +M + GV ++ +Y+ +D +CK+G+ +A ++++ M K GI +
Sbjct: 380 NCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPN 439
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
Y ++ +E ++ AM++ ++M E +P ++ ++I C ++ E +L
Sbjct: 440 QQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILE 499
Query: 272 EMPKKGC----VPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
EM +G V +F+ K + L F M + G+ + TY +L+
Sbjct: 500 EMKSRGISANPVISTTIIDAYFKA-GKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEA 558
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREE 387
G + + +M LG P+ Y +L+D L ++ A+K +EM +G++ P
Sbjct: 559 GIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMT--PDIT 616
Query: 388 LGTKLVQGGL 397
T L+ G L
Sbjct: 617 AFTALIDGNL 626
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 171/370 (46%), Gaps = 19/370 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN +ID L K + + S L +M++ S P+ T+ + Y + E FN+
Sbjct: 232 TYNVMIDYLCKEGDLENSRRLFVQMREMGLS-PDVVTYNSLIDGYGKVGSLEEVASLFNE 290
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + G + D ++Y L++ C+++ + A E F E KN G V Y+ ++
Sbjct: 291 MKDVGCVPDIITYNGLINCYCKFEKMPRAFEY-FSEMKNNGLKPNV-----VTYSTLIDA 344
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K + +M + G++ + +Y+ +D CK+G +A KL +M + G+K++
Sbjct: 345 FCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLN 404
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+V Y ++ + + + A V+R M + G P+ ++ + R+ +A +L
Sbjct: 405 IVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILK 464
Query: 272 EMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+M + PD+I Y HC R LE+ + IL + M GI ++ +
Sbjct: 465 QMTECNIKPDLILYGSIIWGHCSQRKLEETKLIL---EEMKSRGISANPVISTTIIDAYF 521
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
+ G +++M+++G Y L+D L + G++++A Y M + GL +P
Sbjct: 522 KAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGL--QPN 579
Query: 386 EELGTKLVQG 395
+ T L+ G
Sbjct: 580 VAVYTSLIDG 589
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 153/334 (45%), Gaps = 26/334 (7%)
Query: 33 TYNSVIDIL---GKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
TY +++D L G+ E + + +KD S PN + + Y+ A + +AM
Sbjct: 407 TYTALLDGLCKAGRMIEAEEVFR--SMLKDGIS--PNQQVYTALVHGYIKAERMEDAMKI 462
Query: 90 FNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
++ E +K D + Y +++ C + +E +L E K+ G S I I
Sbjct: 463 LKQMTECNIKPDLILYGSIIWGHCSQRK-LEETKLILEEMKSRGISA-----NPVISTTI 516
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ +FK F++EM GV + +Y + +D +C++G AV + M G+
Sbjct: 517 IDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGL 576
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ +V Y ++I + + ++ A +++ EM+ G P + +I ++G ++EA
Sbjct: 577 QPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALV 636
Query: 269 VLAEMPKKGCVPDVITYHC----FFRC--LEKPREILGLFDRMIESGIRPKMDTYVMLLR 322
+++ M + D+ Y F +C L + R+ F+ MIE GI P+ + LLR
Sbjct: 637 LISRMTELAIEFDLHVYTSLVSGFSQCGELHQARK---FFNEMIEKGILPEEVLCICLLR 693
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPD---EFAYN 353
++ + G L + +ME + S + + AYN
Sbjct: 694 EYYKRGQLDEAIELKNEMERMAYSFEFDAQLAYN 727
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 163/342 (47%), Gaps = 11/342 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +ID L + D + L +M+ + S P+ T+ + ++ + +++
Sbjct: 299 TYTVLIDALCAAGKLDKAKELYTKMRAS-SHKPDLVTYITLMSKFGNYGDLETVKRFWSE 357
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
++ G D V+Y LV+ALC+ V +A F + G+V T YN ++ G
Sbjct: 358 MEADGYAPDVVTYTILVEALCKSGKVDQA----FDMLDVMRVRGIVPNLHT--YNTLISG 411
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + E + M+ GV +SY +++D K G P KA+ +++MKK+GI
Sbjct: 412 LLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPS 471
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ A N + ++ + A ++ ++ G P VT N ++K + G++ +A +L
Sbjct: 472 IAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLT 531
Query: 272 EMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM +GC PD+I + L K E +F R+ + + P + TY +L+ G+ G
Sbjct: 532 EMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEG 591
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
L ++ M+E GC P+ +NAL+D L +D+A K
Sbjct: 592 KLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALK 633
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 183/409 (44%), Gaps = 40/409 (9%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDIL---GKFFEFDLSWNLIHRMKDNPSSIP 65
+D AL +F V + HT +T N +++ L G+ + ++L+ + N + P
Sbjct: 100 SDPNSALSYFKMVSQLPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRN--P 157
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLV----------DALCEY 114
N T+ +FK + +A K+ + G + + SY L+ +AL Y
Sbjct: 158 N--TYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVY 215
Query: 115 KHVIE-----------AQELCFGENKNVG--FSGLVEMNKTKI------YNMILRGWFKM 155
K +I A + G ++ G L EM + Y + +R +
Sbjct: 216 KRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRA 275
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
+ M+ G D+ +Y++ +D +C +GK KA +LY +M+ K D+V Y
Sbjct: 276 GRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTY 335
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
T++ G ++ R + EM G P VVT +++ LC++G+V +A+ +L M
Sbjct: 336 ITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRV 395
Query: 276 KGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
+G VP++ TY+ L R E L LF+ M G+ P +YV+ + +G+ G
Sbjct: 396 RGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEK 455
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
++KM++ G P A NA + +L + G + A+ ++ GLS
Sbjct: 456 ALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLS 504
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 131/280 (46%), Gaps = 8/280 (2%)
Query: 107 LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE 166
L+ LC+ K ++A++L K++G E YN ++ G + + +
Sbjct: 758 LIRVLCKQKKALDAKKLFDKFTKSLGTHPTPES-----YNCLMDGLLGCNITEAALKLFV 812
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
EM G ++ +Y++ +D KS + + +LY EM +G K +++ +N +I A+ S
Sbjct: 813 EMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSN 872
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
++ A+ +Y E+ P+ T +I L + GR EA + EMP C P+ Y+
Sbjct: 873 SINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYN 932
Query: 287 CFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
K + LF RMI+ GIRP + +Y +L+ G + +++++
Sbjct: 933 ILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLT 992
Query: 344 GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAK 383
G PD +YN +++ L L+ A EM +G+S +
Sbjct: 993 GLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPE 1032
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 143/326 (43%), Gaps = 20/326 (6%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
P ++ + + ++ A+ F ++ G + +Y L+DA + K + E EL
Sbjct: 786 PTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFEL 845
Query: 124 -----CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
C G N+ +N+I+ K + K + + E+
Sbjct: 846 YNEMLCRGCKPNI-----------ITHNIIISALVKSNSINKALDLYYEIISGDFSPTPC 894
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+Y + + K+G+ +A+K+++EM K + YN +I G + V+ A +++ M
Sbjct: 895 TYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRM 954
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR-- 296
+ G +P + + +++ L GRV +A E+ G PD ++Y+ L K R
Sbjct: 955 IKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRL 1014
Query: 297 -EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
E L LF M GI P++ TY L+ FG G + ++++++ +G P+ F YNAL
Sbjct: 1015 EEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNAL 1074
Query: 356 VDALIDKGMLDMARKYDEEMFAKGLS 381
+ G D A ++M G S
Sbjct: 1075 IRGHSKSGNKDRAFSVFKKMMIVGCS 1100
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 156/333 (46%), Gaps = 12/333 (3%)
Query: 28 THTT-DTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
TH T ++YN ++D L + + L MK N PN T+ ++ + + ++E
Sbjct: 784 THPTPESYNCLMDGLLGCNITEAALKLFVEMK-NAGCCPNIFTYNLLLDAHGKSKRIDEL 842
Query: 87 MGTFNKLDEFGLKDEVSYCNLV-DALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
+N++ G K + N++ AL + + +A +L + E + FS Y
Sbjct: 843 FELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYY-EIISGDFS-----PTPCTY 896
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
++ G K + + +EEM + Y+I ++ K+G A L+K M K
Sbjct: 897 GPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIK 956
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+GI+ D+ +Y ++ + ++ VD A+ + E++ G P V+ N +I L ++ R+ E
Sbjct: 957 EGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEE 1016
Query: 266 AYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLR 322
A ++ +EM +G P++ TY+ F + +F+ + G+ P + TY L+R
Sbjct: 1017 ALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIR 1076
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
+ G F V+KKM +GCSP+ + L
Sbjct: 1077 GHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 123/263 (46%), Gaps = 8/263 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++I L D + L + M ++ P ++ + Y +A+ TF K
Sbjct: 404 TYNTLISGLLNLRRLDEALELFNNM-ESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEK 462
Query: 93 LDEFGLKDEVSYCNL-VDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + G+ ++ CN + +L E + EA+++ F + N G S + YNM+++
Sbjct: 463 MKKRGIMPSIAACNASLYSLAEMGRIREAKDI-FNDIHNCGLS-----PDSVTYNMMMKC 516
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K K + EM G D+ + +D + K+G+ +A +++ +K +
Sbjct: 517 YSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPT 576
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
VV YN +I +G + A+ ++ M+E GC P+ VT N ++ LC+N V A +
Sbjct: 577 VVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFC 636
Query: 272 EMPKKGCVPDVITYHCFFRCLEK 294
M C PDV+TY+ L K
Sbjct: 637 RMTIMNCSPDVLTYNTIIYGLIK 659
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 134/296 (45%), Gaps = 13/296 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN ++D GK D + L + M PN T I+ V ++ +N+A+ + +
Sbjct: 825 TYNLLLDAHGKSKRIDELFELYNEMLCRGCK-PNIITHNIIISALVKSNSINKALDLYYE 883
Query: 93 L--DEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
+ +F +Y L+ L + EA ++ F E + IYN+++
Sbjct: 884 IISGDFS-PTPCTYGPLIGGLLKAGRSEEAMKI-FEEMPDYQCK-----PNCAIYNILIN 936
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
G+ K + ++ M K G+ DL SY+I ++ + +G+ AV ++E+K G+
Sbjct: 937 GFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDP 996
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
D V+YN +I +G S ++ A+ ++ EM+ G P + T N +I G V +A +
Sbjct: 997 DTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMF 1056
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRK 323
E+ G P+V TY+ R K +F +M+ G P T+ L K
Sbjct: 1057 EELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPNK 1112
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 153/360 (42%), Gaps = 22/360 (6%)
Query: 35 NSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLD 94
NS+ID L K D +W + R+KD + P T+ I+ + +A+ F +
Sbjct: 546 NSLIDTLYKAGRVDEAWQMFGRLKDLKLA-PTVVTYNILITGLGKEGKLLKALDLFGSMK 604
Query: 95 EFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK---IYNMILR 150
E G + V++ L+D LC+ V A ++ F + MN + YN I+
Sbjct: 605 ESGCPPNTVTFNALLDCLCKNDAVDLALKM---------FCRMTIMNCSPDVLTYNTIIY 655
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE-MKKKGIK 209
G K G F+ +M K + Y++ ++ K G+ A+K+ E + + G++
Sbjct: 656 GLIKEGRAGYAFWFYHQMKKFLSPDHVTLYTLLPGVV-KDGRVEDAIKIVMEFVHQSGLQ 714
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMR-EMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ ++ + + ++ A+ + CQ + +I++LC+ + +A
Sbjct: 715 TSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLIL-PLIRVLCKQKKALDAKK 773
Query: 269 VLAEMPKK-GCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
+ + K G P +Y+C L L LF M +G P + TY +LL
Sbjct: 774 LFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAH 833
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
G+ + +F ++ +M GC P+ +N ++ AL+ ++ A E+ + S P
Sbjct: 834 GKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTP 893
>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 173/369 (46%), Gaps = 14/369 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+N+ +++L + + + L H M P+ ++ I+ A +EA + +
Sbjct: 121 AFNTYLNLLCRQNRLETALELFHSMPSKGRD-PDVVSYTIIIDALCNAKRFDEAAKVWRR 179
Query: 93 LDEFGLKDEVSYC-NLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
L + GL + C LV LC V A EL G K G V++N + +YN ++ G
Sbjct: 180 LIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIK-----GGVKVN-SLVYNALIDG 233
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ +M K + M + G V DL +Y+I ++ C+ G +AV+L + M++ G++ D
Sbjct: 234 FCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPD 293
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ +YN +++ + VD A + E + VV+ NTVI C+ R R+ Y +
Sbjct: 294 LYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFE 353
Query: 272 EMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM KG PD++T++ + + L D M + + P Y ++ + G
Sbjct: 354 EMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNG 413
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREEL 388
+ V++ M E G +PD +YNAL++ + A +EM +KGL +E+
Sbjct: 414 KVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYP---DEV 470
Query: 389 GTKLVQGGL 397
KL+ GGL
Sbjct: 471 TYKLIVGGL 479
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 126/281 (44%), Gaps = 11/281 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
YN++ID + D + I +P+ T+ I+ +V+EA+
Sbjct: 226 VYNALIDGFCRMGRVDKAMK-IKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVET 284
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
++ G++ D SY L+ C+ V A + + G +V YN ++
Sbjct: 285 MERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVS------YNTVITA 338
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K K E +EEM +G+ D+ +++I +D + G KL EM K + D
Sbjct: 339 FCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPD 398
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ Y V+ + + VD A V+R+M E G P V++ N ++ C+ RV +A +
Sbjct: 399 CIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFD 458
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESG 309
EM KG PD +TY L + ++I ++D+M+E G
Sbjct: 459 EMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERG 499
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 145/328 (44%), Gaps = 14/328 (4%)
Query: 62 SSIPNH-ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKD-EVSYCNLVDALCEYKHVIE 119
SSI H +R + V A L+N+A+ F+++ E + V Y + L + +
Sbjct: 4 SSIGAHRLAYRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHL 63
Query: 120 AQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
A GFS L+ ++ + + ++ +MD G V D+ +
Sbjct: 64 AHHYYRRHVIPRGFS-LLPFTYSRFISALCSAPNNINL-PLIHSLLLDMDSLGFVPDIWA 121
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
++ Y++++C+ + A++L+ M KG DVV+Y +I A+ ++ D A +V+R +
Sbjct: 122 FNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLI 181
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCLE 293
+ G P C ++ LC GRV AY ++ + K G + + Y+ C ++
Sbjct: 182 DKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVD 241
Query: 294 KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
K +I R +G P + TY +LL G + + + ME G PD ++YN
Sbjct: 242 KAMKIKAFMSR---TGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYN 298
Query: 354 ALVDALIDKGMLDMAR-KYDEEMFAKGL 380
L+ M+D A E M KG+
Sbjct: 299 ELLKGFCKANMVDRAHLMMVERMQTKGM 326
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 18/201 (8%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM---FKRYVTAHLVNEAMGT 89
+YN+VI K + L M P+ TF I+ F R + H+V + +
Sbjct: 331 SYNTVITAFCKARRTRKGYELFEEMCGKGIR-PDMVTFNILIDAFLREGSTHVVKKLLDE 389
Query: 90 FNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVE--MNKTKI-YN 146
K+ L D + Y +VD LC+ V A + F +VE +N I YN
Sbjct: 390 MTKMRV--LPDCIFYTAVVDHLCKNGKVDVAHSV---------FRDMVENGVNPDVISYN 438
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
+L G+ K S ++EM +G+ D +Y + + + + K A +++ +M ++
Sbjct: 439 ALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMER 498
Query: 207 GIKMDVVAYNTVIRAVGVSEG 227
G ++ T++ A+ S+G
Sbjct: 499 GFTLNRHLSETLVNAIQSSDG 519
>gi|302763707|ref|XP_002965275.1| hypothetical protein SELMODRAFT_83272 [Selaginella moellendorffii]
gi|300167508|gb|EFJ34113.1| hypothetical protein SELMODRAFT_83272 [Selaginella moellendorffii]
Length = 445
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 173/378 (45%), Gaps = 24/378 (6%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKD---NPSSIPNHATFRIMFKRYVTAHLV 83
F H+ TY +++ EFD + L+ KD +P S+ +M K + A LV
Sbjct: 10 FVHSEFTYGTLVHGHCLAGEFDEAKRLVAEFKDTGMSPGSLV--VLHNLMLKGFSEARLV 67
Query: 84 NEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK 143
+EA +++D + VSY L+DALC + EA+E E + + G+ T
Sbjct: 68 DEAKSHLHRMD--CKPNSVSYNTLIDALCSSGRIQEARE----ELQAMAKRGVAPNRVT- 120
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
YN + G K + E M+ G +++ ++ +CKSGKP +A K+ + M
Sbjct: 121 -YNAMATGLGKAGLLDEAFELMGVMESAGFALTAVTFNPVVEFLCKSGKPDEACKVMETM 179
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
+ I+ +++ N ++ A + + A+ + M EMG P++VT N +++L C ++
Sbjct: 180 LLRNIEPNILTLNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQM 239
Query: 264 REAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKM---DTY 317
A +L M + C P+ +TY F + + E ++++ G P + + Y
Sbjct: 240 DSAAELLETMARSKCKPNFVTYSIMVQKFAEMGRMVEARAFLEQLVVCGYAPNLLVCNAY 299
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
V L K G V M E GC + YN+LV+ G +D A + EEM A
Sbjct: 300 VAGLCKTGEMDLASRFLTV---MAEEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIA 356
Query: 378 KGLSAKPREELGTKLVQG 395
+G + P + L+QG
Sbjct: 357 EG--SLPDSTTYSVLIQG 372
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 139/346 (40%), Gaps = 63/346 (18%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A A E +E+ F T T+N V++ L K + D + ++ M PN
Sbjct: 131 AGLLDEAFELMGVMES-AGFALTAVTFNPVVEFLCKSGKPDEACKVMETMLLRNIE-PNI 188
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFG 126
T ++ + A EA+G + + E G V++ L++ C + A EL
Sbjct: 189 LTLNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAEL--- 245
Query: 127 ENKNVGFSGLVEMNKTK------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
L M ++K Y+++++ + +M + R F E++ G +L
Sbjct: 246 ---------LETMARSKCKPNFVTYSIMVQKFAEMGRMVEARAFLEQLVVCGYAPNLLVC 296
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ Y+ +CK+G+ +D A R M E
Sbjct: 297 NAYVAGLCKTGE-----------------------------------MDLASRFLTVMAE 321
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG 300
GC+ + T N++++ C+ GR+ EA VL EM +G +PD TY + L +I+
Sbjct: 322 EGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDSTTYSVLIQGLCSAGQIVH 381
Query: 301 LF------DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
F R +ES RP T+V L+ K G + +V ++M
Sbjct: 382 AFMVMLQVTRAVESA-RPDPATFVKLIEKLCELGEMDRAALVLERM 426
>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
Length = 447
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 162/368 (44%), Gaps = 53/368 (14%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQEL 123
PN T+ ++ + + +++A+ F+ + GL S N L+ LCE + A +L
Sbjct: 23 PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 82
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F E + F + + +N++LRG+F G+ EF++EM GV DL SY I
Sbjct: 83 -FREMQAGPF-----LPTSASHNILLRGFF---MAGRAIEFFKEMKASGVEPDLESYHIL 133
Query: 184 M-----------------------DIM---------CKSGKPWKAVKLYKEMKKKGIKMD 211
+ DIM CK G+ ++A L KE+ K G + +
Sbjct: 134 LSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPN 193
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V Y+ +I + V+ A V+ +M E C P+ VT NT+I C+ G + +A + A
Sbjct: 194 VFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFA 253
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPR----EILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
EM K GC ++TY+ L K R + LF+++ +G+ P + TY L++ F
Sbjct: 254 EMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSER 313
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREE 387
+ M GC PD YN L+ G+ R D + G++ P
Sbjct: 314 A--NDGLRLLCHMHAEGCKPDVITYNCLIS-----GLCSANRVEDAQRLFNGMACAPNVT 366
Query: 388 LGTKLVQG 395
L++G
Sbjct: 367 TFNFLIRG 374
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 176/379 (46%), Gaps = 20/379 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C +A+ F+ +++ + + T N+++ L + + + L M+ P +P
Sbjct: 36 CKGGQMHQAVSVFSDMKSSGLLPNAS-TMNTLLLGLCEIGQMSSALKLFREMQAGPF-LP 93
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELC 124
A+ I+ + + A A+ F ++ G++ ++ SY L+ AL + + EA L
Sbjct: 94 TSASHNILLRGFFMA---GRAIEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHAL- 149
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
FS + YN+++ G+ K+ + + +E+ K G ++ +YSI +
Sbjct: 150 --------FSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIII 201
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ CK K +A +++ +M + + V +NT+I + ++ A++++ EM ++GC+
Sbjct: 202 NCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCK 261
Query: 245 PSVVTCNTVIKLLCEN-GRVREAYAVLAEMPKKGCVPDVITYHCFFRCL-EKPREILGLF 302
++VT NT+I LC+ G V A + ++ G P ++TY+ + E+ + L L
Sbjct: 262 ATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERANDGLRLL 321
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
M G +P + TY L+ + ++ M C+P+ +N L+ L +
Sbjct: 322 CHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFNFLIRGLCAQ 378
Query: 363 GMLDMARKYDEEMFAKGLS 381
++ AR + M A ++
Sbjct: 379 KKVEEARNILDRMTAPDMT 397
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 3/185 (1%)
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
+A++L+KE+ + YN +IR + A+ V+ +M+ G P+ T NT++
Sbjct: 8 QALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLL 67
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKM 314
LCE G++ A + EM +P +++ R + F M SG+ P +
Sbjct: 68 LGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMKASGVEPDL 127
Query: 315 DTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
++Y +LL G + ++ M CSPD YN L+D G A+ +E
Sbjct: 128 ESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKE 184
Query: 375 MFAKG 379
+ G
Sbjct: 185 ILKAG 189
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 89/229 (38%), Gaps = 29/229 (12%)
Query: 6 CYANDWKRALEFFNWVE-TDCHFTHTTDTYNSVIDIL-----GKFFEFDLSWNLIHRMKD 59
C A + A++ F +E C T TYN++ID L G + DL L +
Sbjct: 240 CKAGMLEDAIKLFAEMEKIGCK--ATIVTYNTLIDSLCKKRGGVYTAVDLFNKL-----E 292
Query: 60 NPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVI 118
P T+ + + + + N+ + + G K D ++Y L+ LC V
Sbjct: 293 GAGLTPTIVTYNSLIQGF--SERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVE 350
Query: 119 EAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
+AQ L F+G+ +N ++RG + R + M D+
Sbjct: 351 DAQRL---------FNGMACAPNVTTFNFLIRGLCAQKKVEEARNILDRM----TAPDMT 397
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
+++ + CK+G A ++ K+M K G + + + S+G
Sbjct: 398 TFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGIQSSKG 446
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 143/325 (44%), Gaps = 11/325 (3%)
Query: 57 MKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL--KDEVSYCNLVDALCEY 114
M++ P+ + + Y A + A+ F +L + G + VS+ LV LC+
Sbjct: 1 MRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKM 60
Query: 115 KHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVV 174
+A + F E G V + T I+ G + + R M V
Sbjct: 61 SRATDALAV-FQEMLGAGLQADVNVCNTLIHCTCRLGMLR-----QARRLLHHMTAHAFV 114
Query: 175 KDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRV 234
D+ +YS MD + K+G+ KA++++ M+K G D V YN +I +G VD A+ +
Sbjct: 115 LDVFTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALEL 174
Query: 235 YREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
+M G P T N VI +L GR +AY+ M ++ PDV+TY+ L+K
Sbjct: 175 LEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKK 234
Query: 295 PR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFA 351
R E LFD M + P + T+ L+ + G + ++ ++G P+ +
Sbjct: 235 LRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYI 294
Query: 352 YNALVDALIDKGMLDMARKYDEEMF 376
YNAL+ G +D + ++M
Sbjct: 295 YNALISGFCRSGQVDKGYELFQDMI 319
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 166/382 (43%), Gaps = 33/382 (8%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
YN++I K + D + ++ R+K S PN +F + +A+ F +
Sbjct: 13 AYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQE 72
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQEL---------------------CFGENKN 130
+ GL+ +V+ CN L+ C + +A+ L G+
Sbjct: 73 MLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKAGR 132
Query: 131 VG-----FSGLVE---MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
FS + + M T +YN+++ K + E E+M+++G++ D +Y+I
Sbjct: 133 AAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNI 192
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D++ G+ KA + MK++ DVV YNT++ + D A ++ EM+
Sbjct: 193 VIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANK 252
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---L 299
C P + T T+I L + GR+ +A A + K G VP+ Y+ + ++
Sbjct: 253 CMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGY 312
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
LF MIE P TY +L+ F R G + ++M G +P YN L+ +L
Sbjct: 313 ELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSL 372
Query: 360 IDKGMLDMARKYDEEMFAKGLS 381
G ++ A +EM AKG +
Sbjct: 373 SMAGQVEDAYTLFKEMIAKGFN 394
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 84/174 (48%), Gaps = 4/174 (2%)
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMG-CQPSVVTCNTVIKLLCENGRVREAYAV 269
DVVAYNT+I + D A+ ++R +++ G C+P+ V+ +T++ LC+ R +A AV
Sbjct: 10 DVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAV 69
Query: 270 LAEMPKKGCVPDVITYHCFFRC---LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
EM G DV + C L R+ L M + TY L+ G+
Sbjct: 70 FQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGK 129
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G V+ M++ GC PD YN L+ L +G +D A + E+M KG+
Sbjct: 130 AGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGI 183
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 120/295 (40%), Gaps = 17/295 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+ ++D LGK + + M+ +P+ + ++ V+EA+
Sbjct: 119 TYSYLMDALGKAGRAAKALEVFSNMQ-KAGCMPDTVVYNVLISCLGKQGKVDEALELLED 177
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK----IYNMI 148
++ G+ + Y VI+ C K F G+++ K YN +
Sbjct: 178 MNRKGIMPDCR---------TYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTL 228
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
L G K+ + + ++EM + DL ++ +D + K+G+ A++ + K G
Sbjct: 229 LNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGH 288
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ YN +I S VD ++++M E C P +T ++ G A
Sbjct: 289 VPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAME 348
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVML 320
+L EM ++G P + TY+ R L ++ LF MI G P M TY L
Sbjct: 349 LLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 106/232 (45%), Gaps = 8/232 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN VID+L ++ +++ MK S P+ T+ + +EA F++
Sbjct: 189 TYNIVIDVLSSCGRYEKAYSFFGMMKRRKHS-PDVVTYNTLLNGLKKLRRTDEACDLFDE 247
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + D ++ L+D L + + +A E ++ + + + IYN ++ G
Sbjct: 248 MQANKCMPDLTTFGTLIDTLAKAGRMEDALE------QSARLVKMGHVPNSYIYNALISG 301
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + K E +++M + D +Y+I + + G A++L +EM ++G
Sbjct: 302 FCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPA 361
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
+ YN +IR++ ++ V+ A +++EM G P + T + + L N V
Sbjct: 362 LATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPNLSTPNKSV 413
>gi|22330179|ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
gi|75216707|sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g51965, mitochondrial; Flags: Precursor
gi|4220445|gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolog from
Arabidopsis thaliana BAC gb|AC003673 [Arabidopsis
thaliana]
gi|332194619|gb|AEE32740.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
Length = 650
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 166/345 (48%), Gaps = 44/345 (12%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A+ FN + T+ T YN+++ +L K D + + RM + PN T+ ++
Sbjct: 289 AVGLFNEMITE-GLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCR-PNEYTYSLL 346
Query: 74 F-------------------KRYVTAHLVNEAMGTFNKLDE-------------FGLKDE 101
KRY+T + + + T +KL F +K E
Sbjct: 347 LNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGE 406
Query: 102 V-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGK 160
SY +++++LC IEA E+ + G+V T +YN + K+
Sbjct: 407 RDSYMSMLESLCGAGKTIEAIEML----SKIHEKGVV--TDTMMYNTVFSALGKLKQISH 460
Query: 161 CREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIR 220
+ +E+M K G D+ +Y+I + + G+ +A+ +++E+++ K D+++YN++I
Sbjct: 461 IHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLIN 520
Query: 221 AVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVP 280
+G + VD A ++EM+E G P VVT +T+++ + RV AY++ EM KGC P
Sbjct: 521 CLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQP 580
Query: 281 DVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLR 322
+++TY+ CLEK E + L+ +M + G+ P TY +L R
Sbjct: 581 NIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLER 625
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 168/357 (47%), Gaps = 22/357 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +I +G+ + D + L + M ++ N + + + +V++A+ F++
Sbjct: 272 TYTIMIRTMGRIGKCDEAVGLFNEMITEGLTL-NVVGYNTLMQVLAKGKMVDKAIQVFSR 330
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK----TKIYNM 147
+ E G + +E +Y L++ L E + V G+VE++K IY+
Sbjct: 331 MVETGCRPNEYTYSLLLN-------------LLVAEGQLVRLDGVVEISKRYMTQGIYSY 377
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++R K+ + + +M V + SY ++ +C +GK +A+++ ++ +KG
Sbjct: 378 LVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKG 437
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ D + YNTV A+G + + ++ +M++ G P + T N +I G V EA
Sbjct: 438 VVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAI 497
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKPREILGL---FDRMIESGIRPKMDTYVMLLRKF 324
+ E+ + C PD+I+Y+ CL K ++ F M E G+ P + TY L+ F
Sbjct: 498 NIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECF 557
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G+ + + ++++M GC P+ YN L+D L G A +M +GL+
Sbjct: 558 GKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLT 614
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 138/307 (44%), Gaps = 73/307 (23%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YNM+L K K + +E+M KR +D ++Y+I + M + GK +AV L+ EM
Sbjct: 241 YNMLLDALAKDE---KACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMI 297
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR-- 262
+G+ ++VV YNT+++ + + VD A++V+ M E GC+P+ T + ++ LL G+
Sbjct: 298 TEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLV 357
Query: 263 ------------------------------VREAYAVLAEM---PKKG------------ 277
V EA+ + +M P KG
Sbjct: 358 RLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESL 417
Query: 278 --------------------CVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKM 314
V D + Y+ F L K ++I LF++M + G P +
Sbjct: 418 CGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDI 477
Query: 315 DTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
TY +L+ FGR G + +++++E C PD +YN+L++ L G +D A +E
Sbjct: 478 FTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKE 537
Query: 375 MFAKGLS 381
M KGL+
Sbjct: 538 MQEKGLN 544
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 107/224 (47%), Gaps = 11/224 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMK-DNPSSI 64
C A A+E + + T T YN+V LGK + +L +MK D PS
Sbjct: 418 CGAGKTIEAIEMLSKIHEKGVVTDTM-MYNTVFSALGKLKQISHIHDLFEKMKKDGPS-- 474
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ I+ + V+EA+ F +L+ K D +SY +L++ L + V EA +
Sbjct: 475 PDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAH-V 533
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F E + G + V Y+ ++ + K +EEM +G ++ +Y+I
Sbjct: 534 RFKEMQEKGLNPDV-----VTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNIL 588
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
+D + K+G+ +AV LY +MK++G+ D + Y + R VS G
Sbjct: 589 LDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERLQSVSHG 632
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 97/211 (45%), Gaps = 9/211 (4%)
Query: 158 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
+ + R + M K V ++ + +I + + ++L +KK +KM+ Y
Sbjct: 152 FDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRL---VKKWDLKMNSFTYKC 208
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
+++A S A VY E+R G + + N ++ L ++ +A V +M K+
Sbjct: 209 LLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDMKKRH 265
Query: 278 CVPDVITYHCFFRC---LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
C D TY R + K E +GLF+ MI G+ + Y L++ + +
Sbjct: 266 CRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAI 325
Query: 335 VVWKKMEELGCSPDEFAYNALVDALIDKGML 365
V+ +M E GC P+E+ Y+ L++ L+ +G L
Sbjct: 326 QVFSRMVETGCRPNEYTYSLLLNLLVAEGQL 356
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 124/243 (51%), Gaps = 9/243 (3%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDK---RGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
YN ILR + GK +E E +D+ R D+ +Y+I ++ C +A+KL
Sbjct: 212 YNTILR---SLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLD 268
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
EM+KKG K DVV YN +I + +D A++ M GCQP+V+T N +++ +C G
Sbjct: 269 EMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTG 328
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYV 318
R +A +LA+M +KGC P V+T++ L + R + + + ++M + G P +Y
Sbjct: 329 RWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYN 388
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
LL F + + + M GC PD YN L+ AL G D A + ++ +K
Sbjct: 389 PLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSK 448
Query: 379 GLS 381
G S
Sbjct: 449 GCS 451
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 119/238 (50%), Gaps = 6/238 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN+++ G+ K K + E M V D+ +Y+ + +C SGK +A+++
Sbjct: 180 YNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQM 236
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
++ DV+ Y +I A GV AM++ EMR+ GC+P VVT N +I +C+ GR+
Sbjct: 237 QRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLD 296
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLL 321
EA L MP GC P+VIT++ R + + L M+ G P + T+ +L+
Sbjct: 297 EAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILI 356
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R L V +KM + GC P+ +YN L+ + +D A +Y E M ++G
Sbjct: 357 NFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRG 414
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 157/361 (43%), Gaps = 14/361 (3%)
Query: 6 CYANDWKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C + K A+E + ++ +C+ TY +I+ + L+ M+
Sbjct: 220 CDSGKLKEAMEVLDRQMQRECY--PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCK- 276
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV-DALCEYKHVIEAQEL 123
P+ T+ ++ ++EA+ N + +G + V N++ ++C ++A+ L
Sbjct: 277 PDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERL 336
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ G S V +N+++ + G+ + E+M K G + + SY+
Sbjct: 337 -LADMLRKGCSPSV-----VTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPL 390
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ C+ K +A++ + M +G D+V YNT++ A+ D A+ + ++ GC
Sbjct: 391 LHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGC 450
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR---CLEKPREILG 300
P ++T NTVI L + G+ A +L EM +KG PD+ITY R C K E +
Sbjct: 451 SPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIK 510
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+F M I+P TY ++ + M E GC P + Y L++ +
Sbjct: 511 IFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIA 570
Query: 361 D 361
D
Sbjct: 571 D 571
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 114/239 (47%), Gaps = 6/239 (2%)
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N+ LR + + +F E M +G + D+ + + + C+SGK KA ++ + ++
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G DV+ YN +I S +D A++V + M P VVT NT+++ LC++G+++E
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQV---LERMSVAPDVVTYNTILRSLCDSGKLKE 227
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLR 322
A VL ++ C PDVITY + + L D M + G +P + TY +L+
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ G L M GC P+ +N ++ ++ G A + +M KG S
Sbjct: 288 GICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCS 346
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 148/318 (46%), Gaps = 13/318 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ TF + + + + EAM N++ E G+K D V Y ++D+LC+ HV A L
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSL 199
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + +N G V M Y ++ G W M KR + D+ +++
Sbjct: 200 -FDQMENYGIRPDVVM-----YTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNAL 253
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D K GK A +LY EM + I ++ Y ++I + VD A +++ M GC
Sbjct: 254 IDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGC 313
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILG 300
P VV ++I C+ +V +A + EM +KG + ITY F + KP
Sbjct: 314 FPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQE 373
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL---GCSPDEFAYNALVD 357
+F M+ G+ P + TY +LL G ++ ++++ M++ G +P+ + YN L+
Sbjct: 374 VFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLH 433
Query: 358 ALIDKGMLDMARKYDEEM 375
L G L+ A E+M
Sbjct: 434 GLCYNGKLEKALMVFEDM 451
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 146/335 (43%), Gaps = 54/335 (16%)
Query: 108 VDALCEYKHVIE--AQELCFGENKNVGFSGLVE-------MNKTKIYNMILRGWFKMSWW 158
V A C Y+ ++ L F E ++ F+ +VE ++ TK+ N+I KM +
Sbjct: 34 VRAFCNYREILRNGLHSLQFNEALDL-FTHMVESRPLPSIIDFTKLLNVIA----KMKKF 88
Query: 159 GKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTV 218
+ + GV DL++ ++ M+ C+S +P+ A +M K G + D+V + ++
Sbjct: 89 DVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSL 148
Query: 219 IRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV--------------- 263
I + ++ AM + +M EMG +P VV T+I LC+NG V
Sbjct: 149 INGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGI 208
Query: 264 --------------------REAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG--- 300
R+A ++L M K+ PDVIT++ K + L
Sbjct: 209 RPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEE 268
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L++ MI I P + TY L+ F G + ++ ME GC PD AY +L++
Sbjct: 269 LYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFC 328
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+D A K EM KGL+ T L+QG
Sbjct: 329 KCKKVDDAMKIFYEMSQKGLTGNTITY--TTLIQG 361
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 146/335 (43%), Gaps = 71/335 (21%)
Query: 83 VNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKN------VGFSG 135
VN A+ F++++ +G++ D V Y +LV+ LC +A L G K + F+
Sbjct: 193 VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNA 252
Query: 136 LVE--------MNKTKIYNMILR---------------GWFKMSWWGKCREFWEEMDKRG 172
L++ ++ ++YN ++R G+ + R+ + M+ +G
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG 312
Query: 173 VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM 232
D+ +Y+ ++ CK K A+K++ EM +KG+ + + Y T+I+ G + A
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQ 372
Query: 233 RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK---GCVPDVITYH--- 286
V+ M G P++ T N ++ LC NG+V++A + +M K+ G P++ TY+
Sbjct: 373 EVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLL 432
Query: 287 ---CFFRCLEKP--------------------------------REILGLFDRMIESGIR 311
C+ LEK + + LF + G++
Sbjct: 433 HGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVK 492
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
P + TY ++ R G V+++KM+E G S
Sbjct: 493 PNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
Length = 321
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 140/287 (48%), Gaps = 9/287 (3%)
Query: 102 VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKC 161
V++ LVD LC+ + +A EL + F + ++N I+ K +
Sbjct: 11 VTFGILVDGLCKANRLTDAFELVEVMAERGCFPNAL------VFNGIMDALCKEGRSAEA 64
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
+ E M GV + +Y+I +D CK K +A+++ +EM +G + + V YNT +
Sbjct: 65 YGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHG 124
Query: 222 VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
+ VD A+ ++R M E + V T+I LC+ G++ EAY++L EM GCVP
Sbjct: 125 LCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPK 184
Query: 282 VITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWK 338
Y+ L + E LF RM SGI P T+ M++ + R + ++ +
Sbjct: 185 PGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQ 244
Query: 339 KMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
+M+ G +P E YN L+DAL G + A + +EM ++GLS R
Sbjct: 245 QMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSR 291
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 76/185 (41%), Gaps = 3/185 (1%)
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M +KG VV + ++ + + + A + M E GC P+ + N ++ LC+ GR
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVM 319
EAY + M G P ++TY+ EK L + M G P TY
Sbjct: 61 SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L ++G + +++ M E D + Y L+D L G L A +EM G
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180
Query: 380 LSAKP 384
KP
Sbjct: 181 CVPKP 185
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 157/337 (46%), Gaps = 12/337 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ + K A+ K++E G K D V+Y ++D+LC+ + EA
Sbjct: 174 PSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYF 233
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F E + G V Y+ IL G+ + + +++M R V+ + +++I
Sbjct: 234 -FSEMVDQGIPPNV-----VTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTIL 287
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D +CK G +A ++++ M + G++ D Y+ ++ + +D A +++ M G
Sbjct: 288 VDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGF 347
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILG 300
PSV N +I C++ R+ EA +L+EM + PD +TY + +P+
Sbjct: 348 APSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQK 407
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
LF M G+ P TY +LL + G L F + K M+E P YN L+ +
Sbjct: 408 LFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMC 467
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGL 397
+ G L+ AR+ +F KG+ +P T ++ G L
Sbjct: 468 NFGKLEAARELFSNLFVKGI--QPSVVTYTVMISGLL 502
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 153/329 (46%), Gaps = 11/329 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+S++ + + + +L +M + +PN TF I+ ++ EA F
Sbjct: 248 TYSSILHGFCNLGQLNEATSLFKQMIGR-NVMPNTVTFTILVDGLCKEGMILEARRVFEM 306
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G++ D +Y L+D C + EAQ+L F GF+ V ++YN+++ G
Sbjct: 307 MTENGVEPDAYTYSALMDGYCLQSQMDEAQKL-FDIMVGKGFAPSV-----RVYNILING 360
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + + EM R + D +YS M C++G+P A KL+KEM G+ D
Sbjct: 361 HCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPD 420
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ Y+ ++ + +D A R+ + M+E +P + N +I+ +C G++ A + +
Sbjct: 421 SITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFS 480
Query: 272 EMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+ KG P V+TY L K E +F +M+ +G P TY + ++ F R G
Sbjct: 481 NLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNG 540
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ ++M G S D + L+D
Sbjct: 541 DPSNAVRLIEEMVGRGFSADSSTFQMLLD 569
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 161/359 (44%), Gaps = 23/359 (6%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN+VID L K + + M D PN T+ + + +NEA F ++
Sbjct: 214 YNTVIDSLCKDRRANEAMYFFSEMVDQGIP-PNVVTYSSILHGFCNLGQLNEATSLFKQM 272
Query: 94 -DEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIYNMIL 149
+ + V++ LVD LC+ ++EA+ + F + E Y+ ++
Sbjct: 273 IGRNVMPNTVTFTILVDGLCKEGMILEARRV---------FEMMTENGVEPDAYTYSALM 323
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G+ S + ++ ++ M +G + Y+I ++ CKS + +A L EM + +
Sbjct: 324 DGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLT 383
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
D V Y+T+++ + A ++++EM G P +T + ++ LC++G + EA+ +
Sbjct: 384 PDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRL 443
Query: 270 LAEMPKKGCVPDVITYH------CFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRK 323
L M + P + Y+ C F LE RE LF + GI+P + TY +++
Sbjct: 444 LKAMQESKIEPHICIYNILIQGMCNFGKLEAARE---LFSNLFVKGIQPSVVTYTVMISG 500
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ G +++KM GC P+ YN + + G A + EEM +G SA
Sbjct: 501 LLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSA 559
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 163/371 (43%), Gaps = 41/371 (11%)
Query: 60 NPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEF-GLKDEVSYCNLVDALCEYKH-- 116
+PSSI N Y H V +A+ +FN+L L V + L+ +L + KH
Sbjct: 31 SPSSITNGG----FCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYS 86
Query: 117 ---------------------VIEAQELCFGENKNV--GFSGLVEMNKTKI------YNM 147
I LC +V FS L +M K + +
Sbjct: 87 TVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGT 146
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
+L G + + ++E+ K G L +Y+ + +CK G A++L K+M++KG
Sbjct: 147 LLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKG 206
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
K DVVAYNTVI ++ + AM + EM + G P+VVT ++++ C G++ EA
Sbjct: 207 CKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEAT 266
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKF 324
++ +M + +P+ +T+ L K IL +F+ M E+G+ P TY L+ +
Sbjct: 267 SLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGY 326
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
+ ++ M G +P YN L++ L+ A+ EM+ + L+ P
Sbjct: 327 CLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLT--P 384
Query: 385 REELGTKLVQG 395
+ L+QG
Sbjct: 385 DTVTYSTLMQG 395
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 91/223 (40%), Gaps = 31/223 (13%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F + YN +I+ K + + L+ M D + P+ T+ + + + A A
Sbjct: 347 FAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLT-PDTVTYSTLMQGFCQAGRPQVA 405
Query: 87 MGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL--CFGENK--------NVGFSG 135
F ++ +GL D ++Y L+D LC++ H+ EA L E+K N+ G
Sbjct: 406 QKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQG 465
Query: 136 LVEMNKTK-------------------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
+ K + Y +++ G K + E + +M G + +
Sbjct: 466 MCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPN 525
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+Y++ + ++G P AV+L +EM +G D + ++
Sbjct: 526 SCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 175/379 (46%), Gaps = 25/379 (6%)
Query: 11 WKRALEFFN-----WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
WK ++ ++ DC+ TY S+++ L E +L M +N S P
Sbjct: 258 WKEVVQMLEKMSARGLKPDCY------TYGSLLNYLCALSEMHSFLDL---MVENGLS-P 307
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
+H F I F Y ++++AM FNK+ + GL + V+Y L+DALC+ V +A E+
Sbjct: 308 DHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDA-EVK 366
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F + N G + ++N ++ G + W + E EM +G+ + ++ +
Sbjct: 367 FNQMINEGVTP-----NIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLI 421
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+C G+ + +L M+ G++ D +Y +I ++ D A +V+ M +G
Sbjct: 422 CNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLS 481
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGL 301
P+ VT NT++ C R+ +AY + EM +KG P V+TY+ L + + E L
Sbjct: 482 PTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKEL 541
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
+ MI SG + + TY ++L + + F +++ + G + + ++ AL+
Sbjct: 542 YLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLK 601
Query: 362 KGMLDMARKYDEEMFAKGL 380
G + A + A GL
Sbjct: 602 GGRKEDAMDLFAAIPANGL 620
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 165/380 (43%), Gaps = 16/380 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTD--TYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
C N + ALE + D + + TY +VID L K FD + + +M DN
Sbjct: 180 CNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVK 239
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
PN+ T+ + Y++ E + K+ GLK D +Y +L++ LC + +
Sbjct: 240 -PNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLD 298
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L EN G S I+N+ + K K + + +M + G+ ++ +Y
Sbjct: 299 LMV-EN---GLSP-----DHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGA 349
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D +CK G+ A + +M +G+ ++V +N+++ + + + A + EM + G
Sbjct: 350 LIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQG 409
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREIL 299
P+ V NT+I LC GRV E ++ M G PD +Y CL + E
Sbjct: 410 ICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAE 469
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+FD M+ G+ P TY LL + + + ++++M G +P YN ++ L
Sbjct: 470 KVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGL 529
Query: 360 IDKGMLDMARKYDEEMFAKG 379
A++ M G
Sbjct: 530 FQTKRFSEAKELYLNMINSG 549
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 117/256 (45%), Gaps = 6/256 (2%)
Query: 144 IYNMILRGWFKMSWWGKCRE-FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
+ N +L+G G+ + + M + G D SYSI + C + +A++L +
Sbjct: 135 VINQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRM 194
Query: 203 MKK---KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCE 259
M + +VV Y TVI + ++ D A V+++M + G +P+ T N +I
Sbjct: 195 MANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLS 254
Query: 260 NGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVM 319
G+ +E +L +M +G PD TY L E+ D M+E+G+ P + +
Sbjct: 255 IGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNI 314
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ + G + ++ KM + G SP+ Y AL+DAL G +D A +M +G
Sbjct: 315 FFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEG 374
Query: 380 LSAKPREELGTKLVQG 395
++ P + LV G
Sbjct: 375 VT--PNIVVFNSLVYG 388
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 154/355 (43%), Gaps = 46/355 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+NS++ L +++ + L++ M D PN F + V E +
Sbjct: 381 VFNSLVYGLCTVDKWERAEELVYEMLDQ-GICPNAVFFNTLICNLCNVGRVMEGRRLIDL 439
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVE--MNKTKI-YNMI 148
++ G++ D SY L+ C EA+++ F G+V ++ T++ YN +
Sbjct: 440 MEHVGVRPDAFSYTPLISGYCLAGRTDEAEKV---------FDGMVSIGLSPTEVTYNTL 490
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
L G+ S + EM ++GV + +Y+ + + ++ + +A +LY M G
Sbjct: 491 LHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGT 550
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
K D+ YN ++ + S VD A ++++ + G Q +++T +I L + GR +A
Sbjct: 551 KCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMD 610
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+ A +P G VP+V+TY + + +IE G + D+
Sbjct: 611 LFAAIPANGLVPNVVTYRL-------------VAENLIEEGSLEEFDS------------ 645
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAK 383
++ ME+ G +P+ NALV L+ +G + A Y ++ + S +
Sbjct: 646 -------LFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVE 693
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 10/216 (4%)
Query: 173 VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM 232
V + +YSI + +C+ G+ + + + K G +++ + N +++ + + V AM
Sbjct: 94 VAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAM 153
Query: 233 RV-YREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK---KGCVPDVITYHCF 288
V + M E+GC P V+ + ++K C R EA +L M + C P+V+TY
Sbjct: 154 DVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTV 213
Query: 289 FRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
L K + G+F +MI++G++P DTY L+ + G + V + +KM G
Sbjct: 214 IDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGL 273
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
PD + Y +L++ L L + + M GLS
Sbjct: 274 KPDCYTYGSLLNYLC---ALSEMHSFLDLMVENGLS 306
>gi|242038267|ref|XP_002466528.1| hypothetical protein SORBIDRAFT_01g009420 [Sorghum bicolor]
gi|241920382|gb|EER93526.1| hypothetical protein SORBIDRAFT_01g009420 [Sorghum bicolor]
Length = 595
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 128/273 (46%), Gaps = 10/273 (3%)
Query: 116 HVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVK 175
HV+ A++L S + Y +L GW + + + M V
Sbjct: 170 HVVTAEQLVEEPQTRFPLS-------LRHYTALLYGWCRQGKLDEAKHVLARMKAADVAL 222
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
D+ +++ + G+ A +L +M+++G + V+Y T+I+ +G VD AMRV+
Sbjct: 223 DVVAFNTLLAGFVADGRFEDAFELTGQMEQRGCPPNAVSYTTLIQGLGARGRVDEAMRVF 282
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP 295
EMR GC P VT T++ C+ G++ + Y L + + G D YH FF EK
Sbjct: 283 VEMRRKGCAPDAVTYGTLVSTFCKAGKISQGYEFLDAISRDGLRVDAAVYHGFFVAHEKK 342
Query: 296 REI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
++ L L +RM E P + Y +++R R G + +W +ME G SP +
Sbjct: 343 EQLEECLELMERMRECRCPPDLKIYNVVIRLACRLGETKQAMSLWNEMETGGLSPGVDTF 402
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
+V+ L+ +G+L A Y ++M +GL P+
Sbjct: 403 AIMVNGLVGQGLLVEACSYFKDMVGRGLFVAPQ 435
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 128/302 (42%), Gaps = 25/302 (8%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+N+++ F+ ++ L +M+ PN ++ + + V+EAM F +
Sbjct: 226 AFNTLLAGFVADGRFEDAFELTGQMEQR-GCPPNAVSYTTLIQGLGARGRVDEAMRVFVE 284
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G D V+Y LV C+ + + E F + + ++ + G
Sbjct: 285 MRRKGCAPDAVTYGTLVSTFCKAGKISQGYE----------FLDAISRDGLRVDAAVYHG 334
Query: 152 WF----KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
+F K +C E E M + DL Y++ + + C+ G+ +A+ L+ EM+ G
Sbjct: 335 FFVAHEKKEQLEECLELMERMRECRCPPDLKIYNVVIRLACRLGETKQAMSLWNEMETGG 394
Query: 208 IKMDVVAYNTVIRAVGVSEGVDF-AMRVYREM--REMGCQPSVVTCNTVIKLLCENGRVR 264
+ V + ++ + V +G+ A +++M R + P ++ L + ++
Sbjct: 395 LSPGVDTFAIMVNGL-VGQGLLVEACSYFKDMVGRGLFVAPQYGVLKDLLNALVRDEKLE 453
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI----LGLFDRMIESGIRPKMDTYVML 320
A V + KGC +V + + L + + L D M+E+G+ P+ DT+ L
Sbjct: 454 LAKDVWECIASKGCELNVSAWTIWIHALYAKKHVKEACLYCLD-MLEAGVMPQPDTFAKL 512
Query: 321 LR 322
++
Sbjct: 513 MK 514
>gi|225425882|ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial [Vitis vinifera]
Length = 496
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 172/385 (44%), Gaps = 18/385 (4%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+ +DWK AL F W E+ + H + Y+ ++DILGK + D L+ M+ ++
Sbjct: 88 FKDDWKSALGLFRWAESRLGYEHAPEAYDMMVDILGKLKQVDKMRALMEEMRQ--GNLVR 145
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV-DALCEYKHVIEAQELCF 125
+T +R A +A+ F+ L F L+ NL+ D LC+ + V +A+ +
Sbjct: 146 LSTVAKAMRRLAGAGEWEDAVRVFDDLGNFELEKNTESMNLLLDTLCKERKVEQARAIFL 205
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
++ T +N+ + GW K + + +EM G + SYS +
Sbjct: 206 ELKPHIS-------PNTHTFNIFIHGWCKANRVDEAEWTIQEMKGHGCRPCVISYSTIIQ 258
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
C+ K +L +M+ +G +VV Y T++ ++ E + A+++ MR +GC+P
Sbjct: 259 SYCRQSNFRKVYELLDDMQAQGCAPNVVTYTTIMCSLTKVEQFEEALQIAERMRSVGCKP 318
Query: 246 SVVTCNTVIKLLCENGRVREAYAVL-AEMPKKGCVPDVITYH---CFFRCLEKPREILGL 301
+ N +I L G++REA V EMPK G P+ TY+ F + ++ L L
Sbjct: 319 DTLFYNALIHTLGRAGQLREAVRVFEVEMPKTGVPPNTSTYNSMIAMFCHHSQEQKALNL 378
Query: 302 FDRMIESGI--RPKMDTYVMLLRKFGRWGFLRPVFVVWKKM-EELGCSPDEFAYNALVDA 358
R IE+ +P + TY +L+ + G + + M + S D AY L+
Sbjct: 379 L-REIENSTFCKPDIQTYYPVLKSCFKTGKIDSLSNFLDDMVNKHHLSLDVSAYTLLIHG 437
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAK 383
L + EEM K ++ +
Sbjct: 438 LCRANKCEWGYNLFEEMVGKAITPR 462
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 175/387 (45%), Gaps = 32/387 (8%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM------------------K 58
FF WVE++ + H+ + ++I L K +F + NL+ R+
Sbjct: 61 FFKWVESNLNHXHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIH 120
Query: 59 DNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHV 117
D+P S ++ ++F Y + + +A+ F + G K + C L+++L + +
Sbjct: 121 DDPDSNSQILSWLVIF--YANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKAR-- 176
Query: 118 IEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
+ + K + G+V I+N+++ K K + EM+ R + DL
Sbjct: 177 --LTNMVWKVYKKMVRVGVVP--NIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDL 232
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
+Y+ + + CK G ++A+ + M++ G+ D+V YN++I + A+R++RE
Sbjct: 233 FTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFRE 292
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-K 294
+ G P+ VT T+I C + EA + M +G P V+TY+ R C E K
Sbjct: 293 IN--GATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGK 350
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
++ L + M E + P T L+ + + G + V KKM E G PD+F + A
Sbjct: 351 IKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKA 410
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLS 381
L+ +D A+++ EM G S
Sbjct: 411 LIHGFCKLHEVDSAKEFLFEMLDAGFS 437
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 113/282 (40%), Gaps = 31/282 (10%)
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQ 121
+ PNH T+ + Y + + EA+ ++ GL V +Y +++ LCE + +A
Sbjct: 296 ATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDAN 355
Query: 122 ELC--FGENK----------------NVGFSGLVEMNKTKI-----------YNMILRGW 152
L E K +G G K K+ + ++ G+
Sbjct: 356 RLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGF 415
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K+ +EF EM G +YS +D ++L E+ +KG+ +D+
Sbjct: 416 CKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDI 475
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
Y +IR + + ++ A R++ M+ G + V ++ + G+ A +L E
Sbjct: 476 SVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDE 535
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREILGLF-DRMIESGIRPK 313
M K+ + + Y CF ILGLF D +IE + K
Sbjct: 536 MDKRRLMITLKIYRCFSASYAGDGSILGLFWDHVIERRLISK 577
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 170/379 (44%), Gaps = 38/379 (10%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+ I +LG+ + D ++ + RM D P+ T+ ++ A + A F K
Sbjct: 264 TFTICIRVLGRAGKIDEAYEIFRRMDDEGCG-PDLVTYTVLIDALCNAGQLENAKELFVK 322
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQE-----------------------LCFGEN 128
+ G K D+V Y L+D ++ + +E LC +
Sbjct: 323 MKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARD 382
Query: 129 KNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ F+ M K I YN ++ G + + + M+ GV ++Y
Sbjct: 383 FDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYIT 442
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++D KSG+ KAV+ +++MK KGI ++VA N + ++ + A ++ +RE G
Sbjct: 443 FIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENG 502
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REIL 299
P VT N ++K + G+V EA +L+EM + GC PDVI + L K E
Sbjct: 503 LAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAW 562
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+FDRM + + P + TY LL G+ G ++ +++ M CSP+ ++N L+D
Sbjct: 563 QMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCF 622
Query: 360 IDKGMLDMARKYDEEMFAK 378
+++A K MF+K
Sbjct: 623 CKNDEVELALK----MFSK 637
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 137/292 (46%), Gaps = 11/292 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N ++ + GK + + L M P+ T+ I+ ++ +++A+ F
Sbjct: 825 TFNMLLAVHGKSGKITELFELYKEMISRRCK-PDAITYNIVISSLAKSNNLDKALDFFYD 883
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
L + +Y L+D L + + EA L F E + G I+N+++ G
Sbjct: 884 LVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRL-FEEMSDYGCKP-----NCAIFNILING 937
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K+ + ++ M G+ DL SY+I +D +C +G+ +A+ + E+K G+ D
Sbjct: 938 YGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPD 997
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+AYN +I +G S+ ++ A+ +Y EMR G P + T N+++ L G V +A +
Sbjct: 998 FIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYE 1057
Query: 272 EMPKKGCVPDVITYHCFFR---CLEKPREILGLFDRMIESGIRPKMDTYVML 320
E+ G PDV TY+ R E P ++ M+ G P + TY L
Sbjct: 1058 ELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 115/228 (50%), Gaps = 18/228 (7%)
Query: 155 MSWWGKCREF---WEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+S G R+ +M K G V + +SY+ + ++ +SG +A+++Y+ M +G+K
Sbjct: 167 LSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPS 226
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ Y+ ++ A+G + M + +EM ++G +P+V T I++L G++ EAY +
Sbjct: 227 LKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFR 286
Query: 272 EMPKKGCVPDVITYH------CFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
M +GC PD++TY C LE +E LF +M +G +P Y+ LL KF
Sbjct: 287 RMDDEGCGPDLVTYTVLIDALCNAGQLENAKE---LFVKMKANGHKPDQVIYITLLDKFN 343
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDE 373
+G L W +ME G PD + LVD L AR +DE
Sbjct: 344 DFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCK------ARDFDE 385
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 128/277 (46%), Gaps = 8/277 (2%)
Query: 107 LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE 166
LV LC++K + A ++ K +G S + YN ++ ++ + K + ++
Sbjct: 758 LVRVLCKHKRELYAYQIFDKFTKKLGISPTLAS-----YNCLIGELLEVHYTEKAWDLFK 812
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
+M G D ++++ + + KSGK + +LYKEM + K D + YN VI ++ S
Sbjct: 813 DMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSN 872
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
+D A+ + ++ +P+ T +I L + GR+ EA + EM GC P+ ++
Sbjct: 873 NLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFN 932
Query: 287 CFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
K LF RM+ GIRP + +Y +L+ G + + +++
Sbjct: 933 ILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKST 992
Query: 344 GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G PD AYN +++ L ++ A EM +G+
Sbjct: 993 GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGI 1029
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 116/244 (47%), Gaps = 11/244 (4%)
Query: 8 ANDWKRALEFF-NWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+N+ +AL+FF + V +D F T TY +ID L K + + L M D PN
Sbjct: 871 SNNLDKALDFFYDLVSSD--FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCK-PN 927
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCF 125
A F I+ Y A F ++ G++ ++ SY LVD LC V EA F
Sbjct: 928 CAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYY-F 986
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
E K+ G YN I+ G K + + EM RG+V DL++Y+ M
Sbjct: 987 NELKSTGLDP-----DFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLML 1041
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
+ +G +A ++Y+E++ G++ DV YN +IR +SE + A VY+ M GC P
Sbjct: 1042 NLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNP 1101
Query: 246 SVVT 249
++ T
Sbjct: 1102 NIGT 1105
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 173/412 (41%), Gaps = 46/412 (11%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDIL---------GKFFEFDLSWNLIHRMKD 59
D RAL +F + HTT+T N +++ L FEF + +I R D
Sbjct: 100 TDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEF-MQKKIIRRDLD 158
Query: 60 NPSSIPNHATFRIMFKRYVTA--------------------HLV------NEAMGTFNKL 93
+I + R ++ T HL+ EA+ + ++
Sbjct: 159 TYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRM 218
Query: 94 DEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
GLK + +Y L+ AL + K E + E +++G V + + +R
Sbjct: 219 VSEGLKPSLKTYSALMVALGK-KRDSEMVMVLLKEMEDLGLRPNV-----YTFTICIRVL 272
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
+ + E + MD G DL +Y++ +D +C +G+ A +L+ +MK G K D
Sbjct: 273 GRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQ 332
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V Y T++ +D + +M G P VVT ++ +LC+ EA+A
Sbjct: 333 VIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDV 392
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M K+G +P++ TY+ L + I L L D M G++P TY+ + FG+ G
Sbjct: 393 MRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGE 452
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
++KM+ G P+ A NA + +L + G L A+ + GL+
Sbjct: 453 TGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLA 504
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 3/215 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN+++ K + K +F+ ++ +Y +D + K G+ +A++L++EM
Sbjct: 861 YNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMS 920
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
G K + +N +I G + A ++++ M G +P + + ++ LC GRV
Sbjct: 921 DYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVD 980
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLL 321
EA E+ G PD I Y+ L K + E L L++ M GI P + TY L+
Sbjct: 981 EALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLM 1040
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
G G + ++++++ G PD F YNAL+
Sbjct: 1041 LNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALI 1075
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 133/294 (45%), Gaps = 9/294 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A D+ A F+ + TYN++I L + + + L+ M ++ P
Sbjct: 378 CKARDFDEAFATFDVMRKQ-GILPNLHTYNTLICGLLRAGRIEDALKLLDTM-ESVGVQP 435
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNL-VDALCEYKHVIEAQELC 124
T+ + + +A+ TF K+ G+ + CN + +L E + EA+ +
Sbjct: 436 TAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMF 495
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
G +N GL + T YNM+++ + K+ + EM + G D+ + +
Sbjct: 496 NGLREN----GLAPDSVT--YNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLI 549
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D + K+G+ +A +++ MK + VV YNT++ +G V A+ ++ M C
Sbjct: 550 DSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCS 609
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI 298
P+ ++ NT++ C+N V A + ++M C PDV+TY+ L K ++
Sbjct: 610 PNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKV 663
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 150/360 (41%), Gaps = 20/360 (5%)
Query: 35 NSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL- 93
NS+ID L K D +W + RMKD S P T+ + V +A+ F +
Sbjct: 546 NSLIDSLYKAGRVDEAWQMFDRMKDMKLS-PTVVTYNTLLSGLGKEGRVQKAIELFESMI 604
Query: 94 DEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIYNMILR 150
+ + +S+ L+D C+ V A ++ FS + M+ YN ++
Sbjct: 605 XKKCSPNTISFNTLLDCFCKNDEVELALKM---------FSKMTVMDCKPDVLTYNTVIY 655
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE-MKKKGIK 209
G K + F+ ++ K+ + D + + + K G+ A+ + ++ M + +
Sbjct: 656 GLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFR 714
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
++ + ++ V +D A+ E+ G ++++LC++ R AY +
Sbjct: 715 VNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQI 774
Query: 270 LAEMPKK-GCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ KK G P + +Y+C L + LF M G P T+ MLL G
Sbjct: 775 FDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHG 834
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
+ G + +F ++K+M C PD YN ++ +L LD A + ++ + PR
Sbjct: 835 KSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPR 894
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 195/402 (48%), Gaps = 19/402 (4%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D +F++ +E D H T+ ++D L K F +++ + M+D +PN T
Sbjct: 343 DLDSVKQFWSEMEKDGHVPDVV-TFTILVDALCKAGNFGEAFDTLDVMRDQ-GILPNLHT 400
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGEN 128
+ + + H +++A+ F ++ G+K +Y +D + + A E F +
Sbjct: 401 YNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE-TFEKM 459
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
K G + + +Y++ G + + ++ + + G+V D +Y++ M
Sbjct: 460 KTKGIAPNIVACNASLYSLAKAGRDR-----EAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
K G+ +A+KL EM + G + DV+ N++I + ++ VD A +++ M+EM +P+VV
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRM 305
T NT++ L +NG+++EA + M +KGC P+ IT++ F CL K E+ L + +M
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
++ G P + TY ++ + G ++ + +M++L PD L+ ++ ++
Sbjct: 635 MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLI 693
Query: 366 DMARKYDEEMFAKGLSAKP-----REELGTKLVQGGLDGEQS 402
+ A K F + +P + +G+ L + G+D S
Sbjct: 694 EDAYKIITN-FLYNCADQPANLFWEDLIGSILAEAGIDNAVS 734
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 176/392 (44%), Gaps = 46/392 (11%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F + TY+S++ LGK + D L+ M + PN TF I + A +NEA
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM-ETLGLKPNVYTFTICIRVLGRAGKINEA 277
Query: 87 MGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
++D+ G D V+Y L+DALC + + A+E+ F + K +G + ++ Y
Sbjct: 278 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEV-FEKMK----TGRHKPDRVT-Y 331
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
+L + ++FW EM+K G V D+ +++I +D +CK+G +A M+
Sbjct: 332 ITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRD 391
Query: 206 KGIKMDVVAYNTVI-------------------RAVGVSEG-------VDF--------- 230
+GI ++ YNT+I ++GV +D+
Sbjct: 392 QGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVS 451
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR 290
A+ + +M+ G P++V CN + L + GR REA + + G VPD +TY+ +
Sbjct: 452 ALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK 511
Query: 291 CLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
C K EI + L M+E+G P + L+ + + + ++ +M+E+ P
Sbjct: 512 CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 571
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
YN L+ L G + A + E M KG
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 603
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 138/297 (46%), Gaps = 19/297 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN ++D GK + D + L M + N T I+ V A V++A+ +
Sbjct: 822 TYNFLLDAYGKSGKIDELFELYKEMSTHECE-ANTITHNIVISGLVKAGNVDDALDLYYD 880
Query: 93 L--DEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIYNM 147
L D +Y L+D L + + EA++L F G+++ IYN+
Sbjct: 881 LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQL---------FEGMLDYGCRPNCAIYNI 931
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++ G+ K ++ M K GV DL +YS+ +D +C G+ + + +KE+K+ G
Sbjct: 932 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR-EMGCQPSVVTCNTVIKLLCENGRVREA 266
+ DVV YN +I +G S ++ A+ ++ EM+ G P + T N++I L G V EA
Sbjct: 992 LNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEA 1051
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCLE---KPREILGLFDRMIESGIRPKMDTYVML 320
+ E+ + G P+V T++ R KP ++ M+ G P TY L
Sbjct: 1052 GKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 167/383 (43%), Gaps = 25/383 (6%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDIL---GKFFE----FDLSWNLIHRMKDNPS 62
D + +F V + + HTT+T N +++ L GK E FDL I + N
Sbjct: 97 DTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTN-- 154
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQ 121
T+ +FK + +A K+ EFG + + SY L+ L + + EA
Sbjct: 155 ------TYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAM 208
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
E+ + + G +T Y+ ++ G K +EM+ G+ ++++++
Sbjct: 209 EV----YRRMILEGFRPSLQT--YSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFT 262
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
I + ++ ++GK +A ++ K M +G DVV Y +I A+ + +D A V+ +M+
Sbjct: 263 ICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTG 322
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REI 298
+P VT T++ +N + +EM K G VPDV+T+ L K E
Sbjct: 323 RHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEA 382
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
D M + GI P + TY L+ R L ++ ME LG P + Y +D
Sbjct: 383 FDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDY 442
Query: 359 LIDKGMLDMARKYDEEMFAKGLS 381
G A + E+M KG++
Sbjct: 443 YGKSGDSVSALETFEKMKTKGIA 465
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 174/407 (42%), Gaps = 40/407 (9%)
Query: 12 KRALEFF-NWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
+ A+E F V+ C T T+N++ D L K E L+ ++ +M D +P+ T+
Sbjct: 590 QEAIELFEGMVQKGC--PPNTITFNTLFDCLCKNDEVTLALKMLFKMMDM-GCVPDVFTY 646
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQEL------- 123
+ V V EAM F+++ + D V+ C L+ + + + +A ++
Sbjct: 647 NTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYN 706
Query: 124 CFGENKNV-------------GFSGLVEMNKTKIYN-----------MILRGWFKMSWWG 159
C + N+ G V ++ + N I+R K +
Sbjct: 707 CADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVS 766
Query: 160 KCREFWEEMDKR-GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTV 218
R +E+ K GV L +Y++ + + ++ A ++ ++K G DV YN +
Sbjct: 767 GARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFL 826
Query: 219 IRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE-MPKKG 277
+ A G S +D +Y+EM C+ + +T N VI L + G V +A + + M +
Sbjct: 827 LDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRD 886
Query: 278 CVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
P TY L K E LF+ M++ G RP Y +L+ FG+ G
Sbjct: 887 FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAAC 946
Query: 335 VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
++K+M + G PD Y+ LVD L G +D Y +E+ GL+
Sbjct: 947 ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLN 993
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 156/369 (42%), Gaps = 49/369 (13%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++I L K + + H+MK P+ T + V A L+ +A
Sbjct: 645 TYNTIIFGLVKNGQVKEAMCFFHQMKK--LVYPDFVTLCTLLPGVVKASLIEDAYKIITN 702
Query: 93 ---------------------LDEFGLKDEVSY---------CNLVDAL--------CEY 114
L E G+ + VS+ C D++ C++
Sbjct: 703 FLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKH 762
Query: 115 KHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVV 174
+V A+ L K++G K YN+++ G + ++ + ++ G +
Sbjct: 763 NNVSGARTLFEKFTKDLGVQ-----PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCI 817
Query: 175 KDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRV 234
D+ +Y+ +D KSGK + +LYKEM + + + +N VI + + VD A+ +
Sbjct: 818 PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL 877
Query: 235 YRE-MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE 293
Y + M + P+ T +I L ++GR+ EA + M GC P+ Y+
Sbjct: 878 YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFG 937
Query: 294 KPRE---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF 350
K E LF RM++ G+RP + TY +L+ G + +K+++E G +PD
Sbjct: 938 KAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVV 997
Query: 351 AYNALVDAL 359
YN +++ L
Sbjct: 998 CYNLIINGL 1006
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 160/356 (44%), Gaps = 11/356 (3%)
Query: 5 SCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
SC N+ A F D TYN +I L + +++ ++ ++K + I
Sbjct: 759 SCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVK-STGCI 817
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ AT+ + Y + ++E + ++ + + +++ ++ L + +V +A +L
Sbjct: 818 PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL 877
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ + FS Y ++ G K + ++ +E M G + Y+I
Sbjct: 878 YYDLMSDRDFS-----PTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNIL 932
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
++ K+G+ A L+K M K+G++ D+ Y+ ++ + + VD + ++E++E G
Sbjct: 933 INGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGL 992
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEM-PKKGCVPDVITYHCFFRCLEKP---REIL 299
P VV N +I L ++ R+ EA + EM +G PD+ TY+ L E
Sbjct: 993 NPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAG 1052
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
+++ + +G+ P + T+ L+R + G + V++ M G SP+ Y L
Sbjct: 1053 KIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 179/402 (44%), Gaps = 40/402 (9%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
D + AL FF W + F HT++ Y ++ IL + + ++ + +P+
Sbjct: 110 QDARLALRFFEWAKGRIGFQHTSEAYCILVHILFCARFYSDANAVLKELICLRRVLPSWD 169
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGEN 128
F ++ + T ++ G F+ L AL E + EA E CF
Sbjct: 170 VFDLL---WATRNVCVPGFGVFDAL--------------FSALIELGMLEEASE-CF--- 208
Query: 129 KNVGFSGLVEMNKTKIY------NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
++M K +++ N +L K+ R+F+++M G+ + + +Y+I
Sbjct: 209 --------LKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 260
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D +CK G A L+ +MK+ G D+V YN++I G +D + ++ +M++
Sbjct: 261 MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 320
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REIL 299
C P V+T N +I C+ R+ +A+ L EM G P+V+TY F K +E +
Sbjct: 321 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 380
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
F M + P TY L+ + G L + +++ + G + Y AL+D L
Sbjct: 381 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 440
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
++G + A + M G++ P +E T LV G + ++
Sbjct: 441 CEEGRMKEAEEVFRAMLNAGVA--PNQETYTALVHGFIKAKE 480
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 161/416 (38%), Gaps = 69/416 (16%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++I+ KF ++ +H MK N PN T+ + ++ EA+ F
Sbjct: 327 TYNALINCFCKFERMPKAFEFLHEMKANGLK-PNVVTYSTFIDAFCKEGMLQEAIKFFVD 385
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC-----FGENKNVG-----FSGLVEMNK 141
+ L +E +Y +L+DA C+ ++ EA +L G NV GL E +
Sbjct: 386 MRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGR 445
Query: 142 TK-------------------IYNMILRGWFKMS-------------------------- 156
K Y ++ G+ K
Sbjct: 446 MKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGT 505
Query: 157 -WWGKCRE--------FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
WG C E E+ + G+ + Y+ MD KSG+ +A+ L +EM G
Sbjct: 506 ILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLG 565
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ V Y +I + S V AM + M E+G QP+V ++ LC+N A
Sbjct: 566 LIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAK 625
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKF 324
+ EM KG +PD I Y K +E L L DRMIE G+ + Y L+
Sbjct: 626 KLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGL 685
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G ++ + +M G PDE Y L+ G +D A + EM +G+
Sbjct: 686 SHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 741
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 7/215 (3%)
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELC 124
N + + Y + EA+ ++ + GL EV+YC L+D LC+ V EA
Sbjct: 534 NAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHH- 592
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
FG +G V +Y ++ G K + + ++ ++EM +G++ D +Y+ +
Sbjct: 593 FGRMSEIGLQPNV-----AVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALI 647
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D K G +A+ L M + G+++D+ AY +I + S V A + EM G
Sbjct: 648 DGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVL 707
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
P V +IK G+V EA + EM K+G +
Sbjct: 708 PDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMI 742
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 120/238 (50%), Gaps = 6/238 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN+++ G+ K G+ + +D+ V D+ +Y+ + +C SGK +A+++
Sbjct: 130 YNVLISGYCK---SGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQL 186
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+K DV+ Y +I A GV AM++ EMR G +P VVT N +I +C+ GR+
Sbjct: 187 QKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLD 246
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLL 321
EA L MP GC P+VIT++ R + + L M+ G P + T+ +L+
Sbjct: 247 EAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILI 306
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R G L + +KM GC+P+ +YN L+ + +D A +Y + M ++G
Sbjct: 307 NFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG 364
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 120/241 (49%), Gaps = 5/241 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ILR + E + ++ D+ +Y+I ++ CK +A+KL EM+
Sbjct: 162 YNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMR 221
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
KG K DVV YN +I + +D A++ M GCQP+V+T N +++ +C GR
Sbjct: 222 NKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWM 281
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG----LFDRMIESGIRPKMDTYVML 320
+A +L++M +KGC P V+T++ L + + +LG + ++M G P +Y L
Sbjct: 282 DAEKLLSDMLRKGCSPSVVTFNILINFLCR-QGLLGRAIDILEKMPMHGCTPNSLSYNPL 340
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
L F + + M GC PD YN L+ AL G +D+A + ++ +KG
Sbjct: 341 LHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGC 400
Query: 381 S 381
S
Sbjct: 401 S 401
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 168/387 (43%), Gaps = 14/387 (3%)
Query: 6 CYANDWKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C + K+A+E + ++ +C+ TY +I+ K + L+ M+ N S
Sbjct: 170 CDSGKLKQAMEVLDRQLQKECY--PDVITYTILIEATCKESGVGQAMKLLDEMR-NKGSK 226
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV-DALCEYKHVIEAQEL 123
P+ T+ ++ ++EA+ N + +G + V N++ ++C ++A++L
Sbjct: 227 PDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKL 286
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ G S V +N+++ + G+ + E+M G + SY+
Sbjct: 287 -LSDMLRKGCSPSVVT-----FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPL 340
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ CK K +A++ M +G D+V YNT++ A+ VD A+ + ++ GC
Sbjct: 341 LHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGC 400
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE---KPREILG 300
P ++T NTVI L + G+ A +L EM +KG PD+ITY L K E +
Sbjct: 401 SPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIK 460
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
F + GIRP TY ++ + M C P E Y L++ +
Sbjct: 461 FFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIA 520
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPREE 387
+G+ A E+ ++GL K E
Sbjct: 521 YEGLAKEALDLLNELCSRGLVKKSSAE 547
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 6/222 (2%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+F E M RG + D+ + + C+ GK KA + + +++ G DV+ YN +I
Sbjct: 78 KFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGY 137
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
S +D A++V + M P VVT NT+++ LC++G++++A VL +K C PDV
Sbjct: 138 CKSGEIDNALQV---LDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDV 194
Query: 283 ITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
ITY K + + L D M G +P + TY +L+ + G L
Sbjct: 195 ITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNN 254
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
M GC P+ +N ++ ++ G A K +M KG S
Sbjct: 255 MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCS 296
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 8/143 (5%)
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGL 301
P ++ C ++I+ C G+ ++A V+ + + G VPDVITY+ K EI L +
Sbjct: 90 PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV 149
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
DRM + P + TY +LR G L+ V + + C PD Y L++A
Sbjct: 150 LDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCK 206
Query: 362 KGMLDMARKYDEEMFAKGLSAKP 384
+ + A K +EM KG +KP
Sbjct: 207 ESGVGQAMKLLDEMRNKG--SKP 227
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--C-LEKPREILGLFDRMIESGI 310
++ L NG + + + L M +G +PD+I R C + K ++ + + + +SG
Sbjct: 64 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
P + TY +L+ + + G + V +M +PD YN ++ L D G L A +
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAME 180
Query: 371 YDEEMFAK 378
+ K
Sbjct: 181 VLDRQLQK 188
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 167/354 (47%), Gaps = 13/354 (3%)
Query: 21 VETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTA 80
VE DC +Y+ +ID L K + + +L + M+ S P T+ + +
Sbjct: 236 VELDCE--PEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGIS-PTVVTYNSLIYGMCNS 292
Query: 81 HLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEM 139
+A F ++ E+ +K D V++ LVDALC+ V+EA + FG+ +
Sbjct: 293 GQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSV-FGKMIQIAMEP---- 347
Query: 140 NKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKL 199
Y+ ++ G K S W + EM R + D+ ++SI++D+ CK G +A +
Sbjct: 348 -DIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSI 406
Query: 200 YKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCE 259
M ++G++ +VV YN+++ + +D A +V+ M GC P V++ N +IK C+
Sbjct: 407 INLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCK 466
Query: 260 NGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDT 316
+ R+ EA + EM KG P+ IT+ L +P LF +M G P + T
Sbjct: 467 SERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLIT 526
Query: 317 YVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
Y LL F + G L +++ +++ P+ L+ + G L+ A++
Sbjct: 527 YSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKE 580
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 170/375 (45%), Gaps = 12/375 (3%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
+++ AL +FN + F T +N ++ L + +D ++ +M+ S +
Sbjct: 83 SNFDDALAYFNQMVHMNPFPCITQ-FNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVY- 140
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGE 127
T I+ HLV K+ + G K + ++ L++ LC ++EA E
Sbjct: 141 TLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQ-LDY 199
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
+ G+ V + MI+ G K+ + ++M + ++ SYSI +D +
Sbjct: 200 IMSRGYQPTVYT-----HTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSL 254
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
CK+ +AV L+ M+ GI VV YN++I + S A +++EM E +P V
Sbjct: 255 CKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDV 314
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDR 304
VT + ++ LC+ G V EA +V +M + PD++TY + K +E L +
Sbjct: 315 VTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNE 374
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
M+ IRP + T+ + + F + G + + M E G P+ YN+L+D
Sbjct: 375 MLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQ 434
Query: 365 LDMARKYDEEMFAKG 379
+D ARK + M KG
Sbjct: 435 MDEARKVFDIMVNKG 449
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 161/347 (46%), Gaps = 19/347 (5%)
Query: 42 GKFFEFDLSWNLIHRMKD-NPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKD 100
G F FD + ++M NP P F + V + + + K++ FG+
Sbjct: 80 GSFSNFDDALAYFNQMVHMNP--FPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSC 137
Query: 101 EV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWG 159
V + L++ LC + H++ G+ +GF + +N ++ G + G
Sbjct: 138 SVYTLTILINCLC-HLHLVGLGFSVLGKIFKLGFKPSI-----ITFNTLING---LCIEG 188
Query: 160 KCREFWEEMD---KRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
+ E E++D RG ++++++ ++ +CK GK A+ K+M + + +VV+Y+
Sbjct: 189 RIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYS 248
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
+I ++ + V+ A+ ++ MR +G P+VVT N++I +C +G+ ++A + EM +
Sbjct: 249 IIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEW 308
Query: 277 GCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
PDV+T+ L K E L +F +MI+ + P + TY L+ + +
Sbjct: 309 NMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKES 368
Query: 334 FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ +M PD ++ VD KGM+ A+ M +GL
Sbjct: 369 STLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGL 415
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 131/251 (52%), Gaps = 8/251 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+S+I + K + S L++ M P+ TF I + +V+EA N
Sbjct: 351 TYSSLIHGVCKSSLWKESSTLLNEMLSRNIR-PDVVTFSIWVDVFCKKGMVSEAQSIINL 409
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E GL+ + V+Y +L+D C + + EA+++ F N G + V YN++++G
Sbjct: 410 MIERGLRPNVVTYNSLMDGYCLHSQMDEARKV-FDIMVNKGCAPDVLS-----YNILIKG 463
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K + ++ ++EM +G+ + +++ + +C++G+P+ A +L+K+M G D
Sbjct: 464 YCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPD 523
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
++ Y+T++ +D A+ ++ +++ +P+ V C ++ +C+ G++ +A + +
Sbjct: 524 LITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFS 583
Query: 272 EMPKKGCVPDV 282
+ + PDV
Sbjct: 584 SLSIEELQPDV 594
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 84/173 (48%), Gaps = 3/173 (1%)
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ +N ++ A+ + D + +YR+M G SV T +I LC V ++VL
Sbjct: 104 ITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLG 163
Query: 272 EMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
++ K G P +IT++ C+E + E + D ++ G +P + T+ M++ + G
Sbjct: 164 KIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIG 223
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
V KKM EL C P+ +Y+ ++D+L +++ A M + G+S
Sbjct: 224 KTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGIS 276
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 179/392 (45%), Gaps = 17/392 (4%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
+ ++ + F+ +E C H +YN VI+ L + F ++ +++ +M P+
Sbjct: 23 SKNYDLVISLFHHMEV-CGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYE-PDV 80
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFG 126
T + + + V +A+ +K++E G + D V Y ++D C+ V +A EL F
Sbjct: 81 VTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVEL-FD 139
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
+ G YN ++ G W +M R +V ++ +++ +D+
Sbjct: 140 RMERDGVRA-----DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 194
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
K GK +A+KLY+EM ++ + DV YN++I + + VD A ++ M GC P
Sbjct: 195 FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD 254
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC---LEKPREILGLFD 303
VVT NT+I C++ RV E + EM ++G V D ITY+ + +P +F
Sbjct: 255 VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS 314
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
RM RP + TY +LL + V+++ M++ D YN ++ + G
Sbjct: 315 RMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIG 371
Query: 364 MLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
++ A + KGL KP T ++ G
Sbjct: 372 NVEDAWDLFRSLSCKGL--KPDVVSYTTMISG 401
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 117/249 (46%), Gaps = 11/249 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+ +VID+ K +F + L M P+ T+ + V+EA +
Sbjct: 187 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD-PDVFTYNSLINGLCMHGRVDEAKQMLDL 245
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G L D V+Y L++ C+ K V E +L F E G G T YN I++G
Sbjct: 246 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKL-FREMAQRGLVG-----DTITYNTIIQG 299
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+F+ +E + MD R ++ +YSI + +C + + KA+ L++ M+K I++D
Sbjct: 300 YFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 356
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ YN VI + V+ A ++R + G +P VV+ T+I C + ++ +
Sbjct: 357 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYR 416
Query: 272 EMPKKGCVP 280
+M + G +P
Sbjct: 417 KMQEDGLLP 425
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 105/238 (44%), Gaps = 38/238 (15%)
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
+S + + KS + L+ M+ GI D+ +YN VI + A+ V +M
Sbjct: 13 FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 72
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF--RC-LEKPR 296
+ G +P VVT +++I C+ RV +A ++++M + G PDV+ Y+ C +
Sbjct: 73 KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 132
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKF---GRWG----FLR------------------ 331
+ + LFDRM G+R TY L+ GRW +R
Sbjct: 133 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 192
Query: 332 PVFV----------VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
VFV ++++M PD F YN+L++ L G +D A++ + M KG
Sbjct: 193 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 250
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 3/172 (1%)
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+V ++ V+ + S+ D + ++ M G + + N VI LC R A +V+
Sbjct: 10 IVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVG 69
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+M K G PDV+T + + + L +M E G RP + Y ++ + G
Sbjct: 70 KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG 129
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ ++ +ME G D YN+LV L G A + +M + +
Sbjct: 130 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDI 181
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 185/412 (44%), Gaps = 38/412 (9%)
Query: 4 LSCYANDWK--RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
L+C K AL F ++ D + TYN +ID+L + ++ ++ M ++
Sbjct: 95 LTCLGKKRKVDEALSLFEVMKKDAE--PNSSTYNIIIDMLCLGGRVEEAYRILDEM-EHA 151
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA 120
S PN T IM R A + EA F + G D V+YC+L+D L + V EA
Sbjct: 152 SLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEA 211
Query: 121 QELC-----FGENKN-VGFSGLV--------EMNKTKIYN-MILRGW------------- 152
L G N N V ++ L+ + + KI+ +I RG
Sbjct: 212 YRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDC 271
Query: 153 -FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
FK K R +E++ G + D+ SYSI + + K+G+ + ++ MK++G +D
Sbjct: 272 VFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALD 331
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
AYN V+ S V A + EM+E QP+V T ++ L + R+ EAY +
Sbjct: 332 ARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFE 391
Query: 272 EMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
E KG +V+ Y F + + E + + M++ G+ P + T+ LL +
Sbjct: 392 EAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAE 451
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ V ++ M+E+ C P+ + Y+ L++ L + A + ++M +GL
Sbjct: 452 EINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGL 503
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 157/350 (44%), Gaps = 9/350 (2%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY S+ID LGK + D ++ L +M D + N + + + + + F +
Sbjct: 194 TYCSLIDGLGKKGQVDEAYRLFEKMLDAGHN-ANPVVYTSLIRNFFIHGRKEDGHKIFKE 252
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
L G K +++ N +E + F + ++ GF + + Y++++ G
Sbjct: 253 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGF-----LPDVRSYSILIHGL 307
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K + + M ++G D +Y+ +D CKSGK KA ++ +EMK+K ++ V
Sbjct: 308 TKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 367
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
Y ++ + + +D A ++ E + G + +VV +++I + GR+ EAY +L E
Sbjct: 368 ATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE 427
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M KKG P+V T++ L K EI L F M E P TY +L+ R
Sbjct: 428 MMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQK 487
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
FV W+ M++ G P+ Y ++ L G + A E A G
Sbjct: 488 YNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANG 537
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 165/350 (47%), Gaps = 18/350 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+Y S+I +L K + L +M + S+P + M Y +A +A +
Sbjct: 20 SYTSMIWVLCKAGRLGEAEELFAQM-EAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLER 78
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
L E G + VS+ +++ L + + V EA L K+ E N + YN+I+
Sbjct: 79 LRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA------EPNSS-TYNIIID- 130
Query: 152 WFKMSWWGKCREFW---EEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G+ E + +EM+ + +L + +I +D +CK+ K +A K+++ ++G
Sbjct: 131 --MLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGC 188
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
D V Y ++I +G VD A R++ +M + G + V ++I+ +GR + +
Sbjct: 189 NPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHK 248
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFG 325
+ E+ ++GC PD+ + + C+ K E+ +F+ + G P + +Y +L+
Sbjct: 249 IFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLT 308
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
+ G R ++ M++ G + D AYNA+VD G + A + EEM
Sbjct: 309 KAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEM 358
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 140/295 (47%), Gaps = 11/295 (3%)
Query: 90 FNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
F++L GLK D+VSY +++ LC+ + EA+EL F + + YN +
Sbjct: 6 FHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEEL-FAQ-----MEAERSVPCAYAYNTM 59
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G+ + + E + +RG + + S++ + + K K +A+ L++ MKK
Sbjct: 60 IMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA- 118
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ + YN +I + + V+ A R+ EM P+++T N ++ LC+ ++ EAY
Sbjct: 119 EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYK 178
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ ++GC PD +TY L K ++ LF++M+++G Y L+R F
Sbjct: 179 IFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFF 238
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G ++K++ GC PD N +D + G ++ R E++ + G
Sbjct: 239 IHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGF 293
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 121/233 (51%), Gaps = 9/233 (3%)
Query: 155 MSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVA 214
M+W +F+ E+ +G+ D SY+ + ++CK+G+ +A +L+ +M+ + A
Sbjct: 1 MAW-----KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYA 55
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
YNT+I G + + A ++ +RE GC PSVV+ N+++ L + +V EA + L E+
Sbjct: 56 YNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALS-LFEVM 114
Query: 275 KKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
KK P+ TY+ L + E + D M + + P + T +++ + + L
Sbjct: 115 KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLE 174
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
+ +++ + GC+PD Y +L+D L KG +D A + E+M G +A P
Sbjct: 175 EAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANP 227
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 129/264 (48%), Gaps = 8/264 (3%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F +Y+ +I L K + + N+ H MK ++ A + + + + V++A
Sbjct: 293 FLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARA-YNAVVDGFCKSGKVHKA 351
Query: 87 MGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
++ E ++ V +Y +VD L + + EA L F E K+ G +E+N +Y
Sbjct: 352 YEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYML-FEEAKSKG----IELNVV-LY 405
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
+ ++ G+ K+ + EEM K+G+ ++++++ +D + K+ + +A+ ++ MK+
Sbjct: 406 SSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKE 465
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+ Y+ +I + + + A +++M++ G P+VVT T+I L + G + +
Sbjct: 466 MKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITD 525
Query: 266 AYAVLAEMPKKGCVPDVITYHCFF 289
AY++ G +PD +++
Sbjct: 526 AYSLFERFKANGGIPDAASFNALI 549
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 8/242 (3%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F YN+V+D K + ++ ++ MK+ P AT+ + ++EA
Sbjct: 328 FALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQ-PTVATYGAIVDGLAKIDRLDEA 386
Query: 87 MGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
F + G++ + V Y +L+D + + EA L E G + V +
Sbjct: 387 YMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAY-LILEEMMKKGLTPNV-----YTW 440
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N +L K + ++ M + + ++YSI ++ +C+ K KA +++M+K
Sbjct: 441 NSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQK 500
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+G+ +VV Y T+I + + A ++ + G P + N +I+ + R E
Sbjct: 501 QGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAME 560
Query: 266 AY 267
AY
Sbjct: 561 AY 562
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 169/354 (47%), Gaps = 13/354 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS+ID GK E + L+ M+ P+ T+ + + + A F +
Sbjct: 231 TYNSLIDGYGKCGELEEVEKLVGEMR-GCGCRPDVVTYNALVNCFCKFGRMERAYSYFAE 289
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI-YNMILR 150
+ G + + V++ VDA C+ V EA +L F + + G M ++ Y ++
Sbjct: 290 MKREGVMANVVTFSTFVDAFCKNGMVREAMKL-FAQMRMKG------MKPNEVTYTCLVD 342
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
G K EM ++GV ++ +Y++ +D +CK GK +A +++ M++ GI+
Sbjct: 343 GTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRA 402
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
+ + Y T+I V + + A+ + EM++ G + V +I LC ++ EA ++L
Sbjct: 403 NELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLL 462
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
+M + G P+ + Y K R E + L +M++SG RP + TY L+ +
Sbjct: 463 NKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKA 522
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G + + KM +LG P+ AY ALVD L G LD A +EM KG+S
Sbjct: 523 GSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMS 576
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 110/223 (49%), Gaps = 5/223 (2%)
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
++ +++I +D +CK G +A L MK G DVV YN++I G ++ ++
Sbjct: 193 NVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLV 252
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP 295
EMR GC+P VVT N ++ C+ GR+ AY+ AEM ++G + +V+T+ F K
Sbjct: 253 GEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKN 312
Query: 296 ---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
RE + LF +M G++P TY L+ + G L V+ +M + G + Y
Sbjct: 313 GMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTY 372
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
LVD L +G + A M G+ A E L T L+ G
Sbjct: 373 TVLVDGLCKEGKVAEAEDVFRLMERAGIRAN--ELLYTTLIHG 413
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 148/344 (43%), Gaps = 33/344 (9%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE- 122
PN T+ + A +++A+ N++ + G+ + V+Y LVD LC+ V EA++
Sbjct: 332 PNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDV 391
Query: 123 ------------------LCFG----ENKNVGFSGLVEMNK------TKIYNMILRGWFK 154
L G +N S L EM +Y ++ G
Sbjct: 392 FRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCN 451
Query: 155 MSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVA 214
+ + + +MD+ G+ + Y+ MD K+ K +A+ L ++M G + ++V
Sbjct: 452 LQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVT 511
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
Y ++ + + +D A+ + +M ++G +P+V ++ LC+NGR+ +A +L EM
Sbjct: 512 YCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMI 571
Query: 275 KKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
KG D + K ++ L +MI SG++ + Y + F ++
Sbjct: 572 DKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQ 631
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
V +M E G +PD YN L++ G ++ A EM
Sbjct: 632 EAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEM 675
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 148/325 (45%), Gaps = 31/325 (9%)
Query: 33 TYNSVIDIL---GKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLV----NE 85
TY ++D L GK E + + L+ R + +++ + H V
Sbjct: 371 TYTVLVDGLCKEGKVAEAEDVFRLMERAGIRAN--------ELLYTTLIHGHFVYKNSER 422
Query: 86 AMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI 144
A+ +++ + G++ +VS Y L+ LC + + EA+ L NK + GL N I
Sbjct: 423 ALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLL---NK-MDECGLKPNNV--I 476
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y I+ FK + ++M G ++ +Y +D +CK+G +A+ + +M
Sbjct: 477 YTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMV 536
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
G++ +V AY ++ + + +D A+ + EM + G V C +++ + G ++
Sbjct: 537 DLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQ 596
Query: 265 EAYAVLAEMPKKGCVPDVITYHCF------FRCLEKPREILGLFDRMIESGIRPKMDTYV 318
+A+A+ A+M G D+ Y CF +++ RE+L MIE+GI P Y
Sbjct: 597 DAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLS---EMIENGITPDAVVYN 653
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEEL 343
L+ K + G + ++ +ME L
Sbjct: 654 CLINKCQKLGNMEEAAILQNEMESL 678
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 103/259 (39%), Gaps = 44/259 (16%)
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV------VAYNTVIRAVGVSEGVDFA 231
HS S+ ++ P A L + + + + +T++ + +D A
Sbjct: 88 HSRSLLSRLLAPGHHPHLAASLVDLLHRAALALGPRRSALPSVVDTLLSLLADRGLLDDA 147
Query: 232 MRVYREMREMGCQPSVVTCNTV-------------------------------IKLLCEN 260
+ +RE+ P+ TCN + I LC+
Sbjct: 148 VLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPAPNVFTFNIMIDFLCKE 207
Query: 261 GRVREAYAVLAEMPKKGCVPDVITYHCFF----RCLEKPREILGLFDRMIESGIRPKMDT 316
G + EA A+LA M GC PDV+TY+ +C E E+ L M G RP + T
Sbjct: 208 GDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGEL-EEVEKLVGEMRGCGCRPDVVT 266
Query: 317 YVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
Y L+ F ++G + + + +M+ G + ++ VDA GM+ A K +M
Sbjct: 267 YNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMR 326
Query: 377 AKGLSAKPREELGTKLVQG 395
KG+ KP E T LV G
Sbjct: 327 MKGM--KPNEVTYTCLVDG 343
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 9/215 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A N ++ +C Y +++D K + + L+ +M D+ P
Sbjct: 450 CNLQKLDEAKSLLNKMD-ECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFR-P 507
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELC 124
N T+ + A ++EA+ FNK+ + GL+ V +Y LVD LC+ + +A L
Sbjct: 508 NIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAV-LL 566
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
E + G S + ++ G K +M G+ DL+ Y+ ++
Sbjct: 567 LDEMIDKGMS-----LDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFV 621
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
C +A ++ EM + GI D V YN +I
Sbjct: 622 WGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLI 656
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 174/370 (47%), Gaps = 17/370 (4%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+++ +AL F + + + H ++T+N+++ +L + FD +W + + +K + N
Sbjct: 101 HSHSTDQALTFLHHMIHEGH-APLSNTFNNLLCLLIRSNYFDKAWWIFNVLKS--KVVLN 157
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCF 125
+F IM A L+EFGL V Y L+D C+ V+ A+ L
Sbjct: 158 AYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFC 217
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
++ GLV T Y++++ G+FK + + +E M++ G+V + ++Y+ +
Sbjct: 218 KMDR----LGLVPNQHT--YSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLIS 271
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF--AMRVYREMREMGC 243
C G KA K++ EM++KGI V+ YN +I G+ G F A+++ ++ ++G
Sbjct: 272 EYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIG--GLCRGKKFGEAVKLVHKVNKVGL 329
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFD 303
P++VT N +I C+ G++ A + ++ G P ++TY+ K + G D
Sbjct: 330 SPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALD 389
Query: 304 ---RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
M E I TY +L+ F R + + ME+ G PD + Y+ L+
Sbjct: 390 LVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXC 449
Query: 361 DKGMLDMARK 370
G + A K
Sbjct: 450 VNGNMKEASK 459
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 161/369 (43%), Gaps = 23/369 (6%)
Query: 23 TDCHFTHT---TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVT 79
T HFT T Y+++++ D + +H M + P TF + +
Sbjct: 78 TQAHFTSCSTYTPLYDAIVNAYVHSHSTDQALTFLHHMIHEGHA-PLSNTFNNLLCLLIR 136
Query: 80 AHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELC-----FGENKNVGFS 134
++ ++A FN L + + S+ ++ CE + + L FG + NV
Sbjct: 137 SNYFDKAWWIFNVLKSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNV--- 193
Query: 135 GLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPW 194
IY ++ G K + + +MD+ G+V + H+YS+ M+ K G
Sbjct: 194 --------VIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQR 245
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
+ ++Y+ M + GI + AYN +I VD A +V+ EMRE G V+T N +I
Sbjct: 246 EGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILI 305
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIR 311
LC + EA ++ ++ K G P+++TY+ F + K + LF+++ SG+
Sbjct: 306 GGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLS 365
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
P + TY L+ + + L + K+MEE + + Y L+DA D A +
Sbjct: 366 PTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEM 425
Query: 372 DEEMFAKGL 380
M GL
Sbjct: 426 HSLMEKSGL 434
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 123/256 (48%), Gaps = 10/256 (3%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGE 127
T+ I+ EA+ +K+++ GL V+Y L++ C+ + A L F +
Sbjct: 300 TYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRL-FNQ 358
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
K+ G S + YN ++ G+ K+ + +EM++R + + +Y+I +D
Sbjct: 359 LKSSGLSPTLV-----TYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAF 413
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
+ KA +++ M+K G+ DV Y+ +I V+ + A + ++ + EM QP+
Sbjct: 414 ARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNS 473
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDR 304
V NT+I C+ G A +L EM G VP+V ++ L EK +E L +
Sbjct: 474 VIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQ 533
Query: 305 MIESGIRPKMDTYVML 320
MI SG++P + Y M+
Sbjct: 534 MINSGLKPSVSLYKMV 549
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 109/241 (45%), Gaps = 15/241 (6%)
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
+I +F +WW + K VV + +S+ I + C++G + +L +++
Sbjct: 134 LIRSNYFDKAWW------IFNVLKSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEF 187
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
G+ +VV Y T+I + V A ++ +M +G P+ T + ++ + G RE
Sbjct: 188 GLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREG 247
Query: 267 YAVLAEMPKKGCVPDVITYHCFFR------CLEKPREILGLFDRMIESGIRPKMDTYVML 320
+ + M + G VP+ Y+C ++K ++ F M E GI + TY +L
Sbjct: 248 FQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKV---FAEMREKGIACGVMTYNIL 304
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ R + K+ ++G SP+ YN L++ D G +D A + ++ + GL
Sbjct: 305 IGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGL 364
Query: 381 S 381
S
Sbjct: 365 S 365
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 96/222 (43%), Gaps = 15/222 (6%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A+ FN +++ + T TYN++I K + +L+ M++ +
Sbjct: 344 CDVGKMDTAVRLFNQLKSS-GLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIA-R 401
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELC 124
+ T+ I+ + + ++A + +++ GL +V +Y L+ C ++ EA +
Sbjct: 402 SKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASK-- 459
Query: 125 FGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
F L EM+ + IYN ++ G+ K + EM G+V ++ S+
Sbjct: 460 -------PFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFC 512
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
M ++C+ K +A L +M G+K V Y V + G
Sbjct: 513 STMGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHKVKG 554
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 183/424 (43%), Gaps = 42/424 (9%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C K A + +E T +YN +I K E + + ++ RM +P
Sbjct: 125 CKIGRTKNASQIMGILEESGAVIDVT-SYNVLISGYCKSGEIEEALRVLDRMGVSP---- 179
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELC 124
N AT+ + + +AM + + +V C L+DA C+ V +A +L
Sbjct: 180 NAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKL- 238
Query: 125 FGENKNVG-------FSGLVE--------------MNKTKIY---------NMILRGWFK 154
F E +N G ++ L++ + K Y NMILR
Sbjct: 239 FNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCS 298
Query: 155 MSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVA 214
W + M ++G + + +++I ++ +C+ G KA+ + + M K G + +
Sbjct: 299 GGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRS 358
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
+N +I+ +G+D A+ M GC P +VT N ++ LC++G+V +A +L+++
Sbjct: 359 FNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLS 418
Query: 275 KKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
KGC P +I+Y+ L K + L + M G++P + T ++ R G +R
Sbjct: 419 SKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVR 478
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTK 391
+ ++ P+ F YN+++ L +A + +M AKG KP E T
Sbjct: 479 EAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKG--CKPTEATYTT 536
Query: 392 LVQG 395
L++G
Sbjct: 537 LIKG 540
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 131/268 (48%), Gaps = 12/268 (4%)
Query: 121 QELC-FGENKNVG-FSGLVEMNKTKI----YNMILRGWFKMSWWGKCREFWEEMDKRGVV 174
+E C G KN G++E + I YN+++ G+ K G+ E +D+ GV
Sbjct: 122 REFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCK---SGEIEEALRVLDRMGVS 178
Query: 175 KDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRV 234
+ +Y + +C GK +A+++ + DVV +I A GV AM++
Sbjct: 179 PNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKL 238
Query: 235 YREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
+ EMR GC+P VVT N +IK C+ GR+ EA L ++P GC PDVI+++ R L
Sbjct: 239 FNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCS 298
Query: 295 P---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFA 351
+ + L M+ G P + T+ +L+ + G L V + M + G +P+ +
Sbjct: 299 GGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRS 358
Query: 352 YNALVDALIDKGMLDMARKYDEEMFAKG 379
+N L+ + +D A +Y E M ++G
Sbjct: 359 FNPLIQGFCNGKGIDRAIEYLEIMVSRG 386
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 6/219 (2%)
Query: 164 FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
F E M +G D+ + + + CK G+ A ++ +++ G +DV +YN +I
Sbjct: 101 FLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYC 160
Query: 224 VSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVI 283
S ++ A+RV + MG P+ T + V+ LC+ G++++A VL + C PDV+
Sbjct: 161 KSGEIEEALRV---LDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVV 217
Query: 284 TYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
T K + + LF+ M G +P + TY +L++ F + G L KK+
Sbjct: 218 TCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKL 277
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
GC PD ++N ++ +L G A K M KG
Sbjct: 278 PSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKG 316
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 119/276 (43%), Gaps = 11/276 (3%)
Query: 6 CYANDWKRALEFF-NWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C W A++ + C + T+N +I+ L + + N++ M + +
Sbjct: 297 CSGGRWMDAMKLLATMLRKGC--LPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHT- 353
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
PN +F + + + ++ A+ + G D V+Y L+ ALC+ V +A +
Sbjct: 354 PNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVI 413
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ L+ YN ++ G K+ E EEM +G+ DL + +
Sbjct: 414 LSQLSSKGCSPSLIS------YNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSV 467
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ + + GK +A+K + +K+ I+ + YN++I + S+ A+ +M GC
Sbjct: 468 VGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGC 527
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
+P+ T T+IK + G +A + E+ +G V
Sbjct: 528 KPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLV 563
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 63/150 (42%), Gaps = 6/150 (4%)
Query: 233 RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
R M G P V+ C +I+ C+ GR + A ++ + + G V DV +Y+
Sbjct: 100 RFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGY 159
Query: 293 EKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE 349
K EI L + DRM G+ P TY +L G L+ V + + C PD
Sbjct: 160 CKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDV 216
Query: 350 FAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L+DA + + A K EM KG
Sbjct: 217 VTCTVLIDATCKESGVGQAMKLFNEMRNKG 246
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--C----LEKPREILGLFDRMIE 307
++ L NG + E L M KG PDVI R C + +I+G+ + E
Sbjct: 86 LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILE---E 142
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
SG + +Y +L+ + + G + V +M G SP+ Y+A++ +L D+G L
Sbjct: 143 SGAVIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQ 199
Query: 368 A 368
A
Sbjct: 200 A 200
>gi|222624423|gb|EEE58555.1| hypothetical protein OsJ_09859 [Oryza sativa Japonica Group]
Length = 858
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 162/357 (45%), Gaps = 26/357 (7%)
Query: 35 NSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR---IMFKRYVTAHLVNEAMGTFN 91
++ + +LG+ F W+L+ + +P+ T R ++ R V E + +F
Sbjct: 114 DTALYVLGRARRFAHMWDLLRSSR---RLVPDAVTPRTAMVVLGRVAKVCSVRETVDSFR 170
Query: 92 KLDEF--GLKDEVS---YCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN-KTKIY 145
+L G D+ + L+ LC+ K + +A +NV + E + +
Sbjct: 171 RLSRMLRGRGDDQEGQLFNALLRTLCQEKSMSDA--------RNVYHALKYEFKVNRQTF 222
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N++L GW F EM + GV DL +Y+ +D CK+ A KL EM++
Sbjct: 223 NILLSGWKSAE---DAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMRE 279
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
K I DV+ Y ++I +G+ D A + +EM E+GC P V NT I+ R+ +
Sbjct: 280 KDISPDVITYTSLIGGLGLIGQPDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGD 339
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLR 322
A+A++ EM KG +P+ TY+ FFRC +I L++RM G P + + ++R
Sbjct: 340 AFALMEEMASKGLMPNATTYNLFFRCYYWAYDIGSAWQLYERMRSEGCFPNTQSCMFIVR 399
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R G + +W M G + L D L D+G LD A + +M G
Sbjct: 400 LCHRHGRVAQALELWSDMVNNGFGSFTLVSDVLFDLLCDEGKLDEAERCFHQMIELG 456
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 7/186 (3%)
Query: 198 KLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLL 257
+L + ++ +G + +N ++R + + + A VY ++ V T LL
Sbjct: 171 RLSRMLRGRGDDQEGQLFNALLRTLCQEKSMSDARNVYHALK----YEFKVNRQTFNILL 226
Query: 258 CENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKM 314
+A A +AEM + G PD++TY+ C K R + L D M E I P +
Sbjct: 227 SGWKSAEDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDISPDV 286
Query: 315 DTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
TY L+ G G + K+M ELGC PD AYN + + L A EE
Sbjct: 287 ITYTSLIGGLGLIGQPDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEE 346
Query: 375 MFAKGL 380
M +KGL
Sbjct: 347 MASKGL 352
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 101/263 (38%), Gaps = 57/263 (21%)
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N TF I+ + +A +A ++ E G++ D V+Y +L+D C+ + V A +L
Sbjct: 218 NRQTFNILLSGWKSAE---DAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKL- 273
Query: 125 FGENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
L EM + I Y ++ G + K + +EM + G D+
Sbjct: 274 -----------LDEMREKDISPDVITYTSLIGGLGLIGQPDKAKHLLKEMHELGCYPDVP 322
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+Y+ + + + A L +EM KG+ + YN R + + A ++Y M
Sbjct: 323 AYNTAIRNFVIAKRLGDAFALMEEMASKGLMPNATTYNLFFRCYYWAYDIGSAWQLYERM 382
Query: 239 REMGCQPSVVTCNTVIKL-----------------------------------LCENGRV 263
R GC P+ +C +++L LC+ G++
Sbjct: 383 RSEGCFPNTQSCMFIVRLCHRHGRVAQALELWSDMVNNGFGSFTLVSDVLFDLLCDEGKL 442
Query: 264 REAYAVLAEMPKKGCVPDVITYH 286
EA +M + G P + +
Sbjct: 443 DEAERCFHQMIELGQKPSNVAFR 465
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 116/282 (41%), Gaps = 14/282 (4%)
Query: 1 RETLSCYANDWKRALEFFNWVETDCHFTHTTD--TYNSVIDILGKFFEFDLSWNLIHRMK 58
R+T + + WK A + +V D TYNS+ID K + ++ L+ M+
Sbjct: 219 RQTFNILLSGWKSAEDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMR 278
Query: 59 DNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVI 118
+ S P+ T+ + ++A ++ E G +V N ++ +
Sbjct: 279 EKDIS-PDVITYTSLIGGLGLIGQPDKAKHLLKEMHELGCYPDVPAYNTA-----IRNFV 332
Query: 119 EAQEL--CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
A+ L F + + GL M YN+ R ++ G + +E M G +
Sbjct: 333 IAKRLGDAFALMEEMASKGL--MPNATTYNLFFRCYYWAYDIGSAWQLYERMRSEGCFPN 390
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
S + + + G+ +A++L+ +M G + + + + +D A R +
Sbjct: 391 TQSCMFIVRLCHRHGRVAQALELWSDMVNNGFGSFTLVSDVLFDLLCDEGKLDEAERCFH 450
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL-AEMPKKG 277
+M E+G +PS V IK+L + E+ A L A+M + G
Sbjct: 451 QMIELGQKPSNVAFRR-IKILMQLANREESIARLTAQMAQFG 491
>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Glycine max]
Length = 631
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 181/407 (44%), Gaps = 49/407 (12%)
Query: 16 EFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFK 75
E +N + ++ H T TY+++I K D + L MK+N P + +
Sbjct: 209 ELYNEMCSEVHCFPDTVTYSALISAFAKLNRDDSAIRLFDEMKENGLQ-PTAKIYTTLMG 267
Query: 76 RYVTAHLVNEAMG-----------------------------------TFNKLDEFGLK- 99
Y V EA+G T+ + + G K
Sbjct: 268 IYFKVGKVEEALGLVKEMRARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCKP 327
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKM-SWW 158
D V NL++ L H+ +A +L F E K + + V YN I++ F+ +
Sbjct: 328 DVVLMNNLINILGRSNHLRDAIKL-FDEMKLLNCAPNV-----VTYNTIIKSLFEAKAPL 381
Query: 159 GKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTV 218
+ ++E M K G+V +YSI +D CK+ + KA+ L +EM +KG AY ++
Sbjct: 382 SEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSL 441
Query: 219 IRAVGVSEGVDFAMRVYREMRE-MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
I +GV++ D A +++E++E GC + V +IK + GR+ EA + EM K G
Sbjct: 442 INTLGVAKRYDVANELFQELKENCGCSSARVYA-VMIKHFGKCGRLNEAINLFNEMKKLG 500
Query: 278 CVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
C PDV Y+ + E+ E LF M E+G P ++++ ++L R G +
Sbjct: 501 CTPDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGAL 560
Query: 335 VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
++ KM+ PD ++N ++ L G+ + A K +EM +KG
Sbjct: 561 EMFTKMKNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKGFQ 607
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 171/366 (46%), Gaps = 23/366 (6%)
Query: 15 LEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSIPNHAT--FR 71
++FF W +F H + TY ++I L + F W I M K + + P + R
Sbjct: 102 IQFFKWAGKRRNFEHDSTTYMALIRCLDEHRMFGEVWKTIQDMVKGSCAMAPAELSEIVR 161
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKN 130
I+ K A +VN A+ F ++ + S Y +++ L + H + EL N
Sbjct: 162 ILGK----AKMVNRALSVFYQVKGRKCRPTASTYNSIILMLMQEGHHEKVHEL-----YN 212
Query: 131 VGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS 190
S + T Y+ ++ + K++ ++EM + G+ Y+ M I K
Sbjct: 213 EMCSEVHCFPDTVTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKV 272
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTC 250
GK +A+ L KEM+ + + V Y +IR +G S V+ A Y+ M + GC+P VV
Sbjct: 273 GKVEEALGLVKEMRARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLM 332
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGL----FDRMI 306
N +I +L + +R+A + EM C P+V+TY+ + L + + L F+RM
Sbjct: 333 NNLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMK 392
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
+ GI P TY +L+ + + + ++ ++M+E G P AY +L++ L
Sbjct: 393 KDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINT------LG 446
Query: 367 MARKYD 372
+A++YD
Sbjct: 447 VAKRYD 452
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 139/295 (47%), Gaps = 22/295 (7%)
Query: 8 ANDWKRALEFFNWVET-DCHFTHTTDTYNSVIDILGKFFEFDL------SWNLIHRMKDN 60
+N + A++ F+ ++ +C TYN++I L FE SW RMK +
Sbjct: 342 SNHLRDAIKLFDEMKLLNC--APNVVTYNTIIKSL---FEAKAPLSEASSW--FERMKKD 394
Query: 61 PSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKD-EVSYCNLVDALCEYKHVIE 119
+P+ T+ I+ Y + V +A+ ++DE G +YC+L++ L K
Sbjct: 395 -GIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDV 453
Query: 120 AQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
A EL +N G S ++Y ++++ + K + + EM K G D+++
Sbjct: 454 ANELFQELKENCGCSS------ARVYAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYA 507
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y+ M M ++ + +A L++ M++ G D+ ++N ++ + + G A+ ++ +M+
Sbjct: 508 YNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGALEMFTKMK 567
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
+P VV+ NT++ L G EA ++ EM KG D+ITY + K
Sbjct: 568 NSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKGFQYDLITYSSILEAVGK 622
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 108/243 (44%), Gaps = 17/243 (6%)
Query: 157 WWGKCREFWEEMDK-RGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
W GK R F + +++ L + ++ G+ WK ++ +M K M
Sbjct: 107 WAGKRRNFEHDSTTYMALIRCLDEHRMF-------GEVWKTIQ---DMVKGSCAMAPAEL 156
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM-P 274
+ ++R +G ++ V+ A+ V+ +++ C+P+ T N++I +L + G + + + EM
Sbjct: 157 SEIVRILGKAKMVNRALSVFYQVKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCS 216
Query: 275 KKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
+ C PD +TY F L + + LFD M E+G++P Y L+ + + G +
Sbjct: 217 EVHCFPDTVTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVE 276
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTK 391
+ K+M C F Y L+ L G ++ A + M G KP L
Sbjct: 277 EALGLVKEMRARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKDG--CKPDVVLMNN 334
Query: 392 LVQ 394
L+
Sbjct: 335 LIN 337
>gi|147841962|emb|CAN63129.1| hypothetical protein VITISV_001456 [Vitis vinifera]
Length = 701
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 156/328 (47%), Gaps = 26/328 (7%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN + + K D + L M + P++ TF + + L N+A+ F K+
Sbjct: 179 YNVTLKVFRKCRNLDXAEKLFDEMLERGVK-PDNITFSTIISCARVSSLPNKAVEWFEKM 237
Query: 94 DEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKN-------VGFSGLVEMNKTKIY 145
EFG D+V+Y ++DA +V A +L + + V FS L+ +IY
Sbjct: 238 PEFGCHPDDVTYSAMIDAYGRAGNVDMALKL-YDRARTEKWRIDPVTFSTLI-----RIY 291
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
M G F C +EEM GV +L Y+ +D M ++ +PW+A +YKEM
Sbjct: 292 GM--SGNFD-----GCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTN 344
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G+++ Y ++RA G + + A+ VY+EM+E G + SVV NT++ + + G E
Sbjct: 345 NGLQLSWGTYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEE 404
Query: 266 AYAVLAEMPKKG-CVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLL 321
A A+ +M G C+PD T+ + C K E + + M+E+G P + L+
Sbjct: 405 AAAIFEDMKSSGNCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLI 464
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDE 349
+ +G+ V + ++ EL +PD+
Sbjct: 465 QCYGKANRTDEVVRTFDRLLELDITPDD 492
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 115/239 (48%), Gaps = 3/239 (1%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+YN+ L+ + K + ++EM +RGV D ++S + S P KAV+ +++M
Sbjct: 178 LYNVTLKVFRKCRNLDXAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEKM 237
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
+ G D V Y+ +I A G + VD A+++Y R + VT +T+I++ +G
Sbjct: 238 PEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNF 297
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVML 320
V EM G P+++ Y+ + ++P + ++ M +G++ TY L
Sbjct: 298 DGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQLSWGTYAAL 357
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
LR +GR + +V+K+M+E G YN L+ D G + A E+M + G
Sbjct: 358 LRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSG 416
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 131/307 (42%), Gaps = 52/307 (16%)
Query: 13 RALEFFNWV-ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
+A+E+F + E CH T Y+++ID G+ D++ L R + I + TF
Sbjct: 229 KAVEWFEKMPEFGCHPDDVT--YSAMIDAYGRAGNVDMALKLYDRARTEKWRI-DPVTFS 285
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNV 131
+ + Y + + + + ++ G+K NLV
Sbjct: 286 TLIRIYGMSGNFDGCLNVYEEMKALGVKP-----NLV----------------------- 317
Query: 132 GFSGLVEMNKTKIYNMILR--GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
IYN +L G K W K ++EM G+ +Y+ + +
Sbjct: 318 ------------IYNTLLDAMGRAKRPWQAK--NIYKEMTNNGLQLSWGTYAALLRAYGR 363
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG-CQPSVV 248
+ A+ +YKEMK+KG+++ VV YNT++ + A ++ +M+ G C P
Sbjct: 364 ARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMPDSW 423
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRM 305
T +++I + +G+V EA A+L M + G P++ +C K E++ FDR+
Sbjct: 424 TFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTFDRL 483
Query: 306 IESGIRP 312
+E I P
Sbjct: 484 LELDITP 490
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 3/173 (1%)
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
+V+ YN ++ +D A +++ EM E G +P +T +T+I + +A
Sbjct: 175 EVILYNVTLKVFRKCRNLDXAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWF 234
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
+MP+ GC PD +TY + + L L+DR R T+ L+R +G
Sbjct: 235 EKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMS 294
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G V+++M+ LG P+ YN L+DA+ A+ +EM GL
Sbjct: 295 GNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGL 347
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 150/303 (49%), Gaps = 10/303 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+H + I+ Y V+EAM F+K+ + GL D V+Y ++ LC+ V +A L
Sbjct: 339 PDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAM-L 397
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + + G S +YN ++ G + W + E EM RG+ + ++
Sbjct: 398 YFEQMIDEGLS-----PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 452
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D CK G+ ++ KL+ M + G+K D++ Y+T+I ++ +D AM++ M +G
Sbjct: 453 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGL 512
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG--- 300
+P+ VT T+I C+ R+ +A + EM G PD+ITY+ + L + R
Sbjct: 513 KPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 572
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L+ R+ ESG + ++ TY ++L + +++ + + + +N ++DAL+
Sbjct: 573 LYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALL 632
Query: 361 DKG 363
G
Sbjct: 633 KVG 635
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 110/232 (47%), Gaps = 10/232 (4%)
Query: 172 GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFA 231
G D+ SY+ ++ K G KA Y EM + I DVV Y+++I A+ + +D A
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKA 250
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGC-----VPDVITYH 286
M V M + G P+ T +++ C +G+ +EA L ++ G PD+ TY
Sbjct: 251 MEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYC 310
Query: 287 CFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
+ ++G L D M+ +GI P Y +L+ + + G + +V+ KM +
Sbjct: 311 TLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQ 370
Query: 344 GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
G +PD Y A++ L G ++ A Y E+M +GLS P + L+ G
Sbjct: 371 GLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS--PGNIVYNSLIHG 420
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 149/362 (41%), Gaps = 29/362 (8%)
Query: 50 SWNLIHRMKDN--PSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK-LDEFGLKDEVSYCN 106
+ L H M D S P+ ++ + + +A T+++ LD D V+Y +
Sbjct: 177 ALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSS 236
Query: 107 LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFK-------MSWWG 159
++ ALC+ + + +A E+ KN G+ M + Y I+ G+ + +
Sbjct: 237 IIAALCKGQAMDKAMEVLTSMVKN----GV--MPNCRTYTSIMHGYCSSGQPKEAIGFLK 290
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
K R E D G+ D+ +Y + G L M + GI D YN +I
Sbjct: 291 KVRSDGVEPD--GLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILI 348
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
A VD AM V+ +MR+ G P VT VI +LC++GRV +A +M +G
Sbjct: 349 CAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 408
Query: 280 PDVITYHCFFRCL------EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
P I Y+ L E+ E L M++ GI + ++ + G +
Sbjct: 409 PGNIVYNSLIHGLCTCNKWERAEE---LILEMLDRGICLNTIFFNSIIDSHCKEGRVIES 465
Query: 334 FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLV 393
++ M +G PD Y+ L+D G +D A K M + GL KP L+
Sbjct: 466 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGL--KPNTVTYRTLI 523
Query: 394 QG 395
G
Sbjct: 524 NG 525
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 162/380 (42%), Gaps = 51/380 (13%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + + A+ +F + D + YNS+I L +++ + LI M D +
Sbjct: 387 CKSGRVEDAMLYFEQM-IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL- 444
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N F + + V E+ F+ + G+K D ++Y L+D C + EA +L
Sbjct: 445 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKL- 503
Query: 125 FGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
SG+V + T Y ++ G+ K+S G ++EM+ GV D+ +Y+
Sbjct: 504 --------LSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYN 555
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
I + + ++ + A +LY + + G ++++ YN ++ + ++ D A+R+++ + M
Sbjct: 556 IILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLM 615
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGL 301
+ T N +I L + GR EA + G VP+ TY +
Sbjct: 616 DLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRL-------------M 662
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
+ +I G+ ++D ++ ME+ GC+ D N +V L+
Sbjct: 663 AENIIGQGLLEELDQ-------------------LFLSMEDNGCTVDSGMLNFIVRELLQ 703
Query: 362 KGMLDMARKY----DEEMFA 377
+G + A Y DE+ F+
Sbjct: 704 RGEITRAGTYLSMIDEKHFS 723
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 93/243 (38%), Gaps = 53/243 (21%)
Query: 173 VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM 232
V +H+Y+I + C++ + + KKG +++ + + +++ + + AM
Sbjct: 83 VTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142
Query: 233 R-VYREMREMGCQPSVVTCNTVIKLLCENGRVRE-------------------------- 265
V R M E+ C P V +C ++K LC+ R +E
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTV 202
Query: 266 ------------AYAVLAEMPKKGCVPDVITYH------CFFRCLEKPREILGLFDRMIE 307
AY+ EM + PDV+TY C + ++K E+L M++
Sbjct: 203 INGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVL---TSMVK 259
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF-----AYNALVDALIDK 362
+G+ P TY ++ + G + KK+ G PD Y L+ K
Sbjct: 260 NGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATK 319
Query: 363 GML 365
G L
Sbjct: 320 GAL 322
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 168/356 (47%), Gaps = 26/356 (7%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA---MGT 89
T +SVI L K D + +L+ M P+ AT ++ A + EA +
Sbjct: 51 TCHSVIQELCKAGRVDSALSLLETMIKR-GYCPDMATHSMLINELCKADKIQEAQEFLQG 109
Query: 90 FNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVE----MNKTKIY 145
N+ SY +L+++LC+ K V +A + FS +V + Y
Sbjct: 110 MNRTISTRASSCFSYNSLLNSLCKAKKVHQAFAI---------FSTMVSERSVVPDVVSY 160
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
++++ G+ K+ G+ + +++M V ++ +Y+ +++ + + G+ A +Y+EM
Sbjct: 161 SILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMIS 220
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G DV+ Y+T+I ++ D A ++ M GC+P+ VT N ++ LC+ + E
Sbjct: 221 AGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDE 280
Query: 266 AYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLR 322
A+ + +M ++GC PD +TY F + K + + +FD M+ G P + Y LL+
Sbjct: 281 AHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLK 340
Query: 323 KF---GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
F G+ G R +F V E C PD ++N ++D L LD A + E M
Sbjct: 341 GFFRAGKPGEARQLFQVMVSRE---CKPDTVSHNIMIDGLSKAKRLDDAVEVFERM 393
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 127/283 (44%), Gaps = 8/283 (2%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWG 159
D ++ L++ LC+ + EAQE G N+ + + YN +L K
Sbjct: 83 DMATHSMLINELCKADKIQEAQEFLQGMNRTIS----TRASSCFSYNSLLNSLCKAKKVH 138
Query: 160 KCREFWEEM-DKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTV 218
+ + M +R VV D+ SYSI +D CK + +A KLYK+M +V YN
Sbjct: 139 QAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAF 198
Query: 219 IRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGC 278
+ + + A VY EM GC P V+T +T+I + +A+ + M +GC
Sbjct: 199 LNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGC 258
Query: 279 VPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFV 335
P+ +TY+C L KP E LF +M+E G P TY LL F G +
Sbjct: 259 RPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVE 318
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
V+ +M G PD AYN L+ G AR+ + M ++
Sbjct: 319 VFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSR 361
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 150/327 (45%), Gaps = 20/327 (6%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKL--DEFGLKDEVSYCNLVDALCEYKHVIEAQELCFG 126
++ + A V++A F+ + + + D VSY L+D C+ + A++L
Sbjct: 123 SYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKL--- 179
Query: 127 ENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ ++++N YN L G + + +EEM G D+ +YS
Sbjct: 180 ------YKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTL 233
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ + K +A +L++ M +G + + V YN ++ + D A ++R+M E GC
Sbjct: 234 IHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGC 293
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC----FFRCLEKPREIL 299
P VT T++ C G++ +A V EM KG PDV+ Y+C FFR KP E
Sbjct: 294 DPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRA-GKPGEAR 352
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE-LGCSPDEFAYNALVDA 358
LF M+ +P ++ +++ + L V+++ME+ GCSPD YN+L+
Sbjct: 353 QLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFG 412
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAKPR 385
L + L A K +E+ LS P
Sbjct: 413 LCGEQRLSEAMKVFKEIDRLKLSPDPH 439
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 127/271 (46%), Gaps = 12/271 (4%)
Query: 121 QELCFGENKNVGFSGLVEMNK------TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVV 174
QELC + S L M K ++M++ K + +EF + M++
Sbjct: 57 QELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTIST 116
Query: 175 K--DLHSYSIYMDIMCKSGKPWKAVKLYKEM-KKKGIKMDVVAYNTVIRAVGVSEGVDFA 231
+ SY+ ++ +CK+ K +A ++ M ++ + DVV+Y+ +I + + A
Sbjct: 117 RASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRA 176
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF--- 288
++Y++M ++ C P+V T N + L GR+ +A V EM GC PDVITY
Sbjct: 177 EKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHG 236
Query: 289 FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
F K + LF+ MI G RP TY LL + +++KM E GC PD
Sbjct: 237 FSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPD 296
Query: 349 EFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ Y L+ + G ++ A + +EM +KG
Sbjct: 297 KVTYTTLLYGFCNVGKIEQAVEVFDEMVSKG 327
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 131/281 (46%), Gaps = 16/281 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C ++ RA + + + D + TYN+ ++ L + + + M S P
Sbjct: 168 CKIDELGRAEKLYKQM-IDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCS-P 225
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ + + A ++A F + G + + V+Y L+ LC+ EA EL
Sbjct: 226 DVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHEL- 284
Query: 125 FGENKNVGFSGLVE--MNKTKI-YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
F +VE + K+ Y +L G+ + + E ++EM +G D+ +Y+
Sbjct: 285 --------FRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYN 336
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM-RE 240
+ ++GKP +A +L++ M + K D V++N +I + ++ +D A+ V+ M ++
Sbjct: 337 CLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQD 396
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
GC P +VT N++I LC R+ EA V E+ + PD
Sbjct: 397 HGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPD 437
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 110/242 (45%), Gaps = 30/242 (12%)
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI----RAVGVSEGVDFAMRVYREMREMG 242
+CK+G+ A+ L + M K+G D+ ++ +I +A + E +F + R +
Sbjct: 59 LCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRA 118
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEM-PKKGCVPDVITYHCFFRCLEKPREILG- 300
S + N+++ LC+ +V +A+A+ + M ++ VPDV++Y K E LG
Sbjct: 119 --SSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDE-LGR 175
Query: 301 ---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
L+ +MI+ P + TY L R G + V+++M GCSPD Y+ L+
Sbjct: 176 AEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIH 235
Query: 358 ALIDKGMLDMARKYDEEMFAKGL----------------SAKPRE--ELGTKLVQGGLDG 399
D A + E M ++G +KP E EL K+V+ G D
Sbjct: 236 GFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDP 295
Query: 400 EQ 401
++
Sbjct: 296 DK 297
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 102/212 (48%), Gaps = 9/212 (4%)
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT---VIRAVGVSEGVDFAMRVY 235
+++ ++ +CKSGK +A + + M++ + T VI+ + + VD A+ +
Sbjct: 13 AWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLL 72
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV--PDVITYHCFFRCLE 293
M + G P + T + +I LC+ +++EA L M + +Y+ L
Sbjct: 73 ETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLC 132
Query: 294 KPREI---LGLFDRMI-ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE 349
K +++ +F M+ E + P + +Y +L+ F + L ++K+M +L C P+
Sbjct: 133 KAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNV 192
Query: 350 FAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
YNA ++ L+ KG + A+ EEM + G S
Sbjct: 193 TTYNAFLNGLMRKGRIADAQGVYEEMISAGCS 224
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 107/232 (46%), Gaps = 9/232 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+++I + D + L M PN T+ + +EA F K
Sbjct: 229 TYSTLIHGFSLARKHDQAHELFEAMISRGCR-PNAVTYNCLLHGLCKESKPDEAHELFRK 287
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G D+V+Y L+ C + +A E+ F E + G V YN +L+G
Sbjct: 288 MVERGCDPDKVTYTTLLYGFCNVGKIEQAVEV-FDEMVSKGHDPDV-----VAYNCLLKG 341
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK-KGIKM 210
+F+ G+ R+ ++ M R D S++I +D + K+ + AV++++ M++ G
Sbjct: 342 FFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSP 401
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
D+V YN++I + + + AM+V++E+ + P N +++ + G
Sbjct: 402 DLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 175/387 (45%), Gaps = 32/387 (8%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM------------------K 58
FF WVE++ + H+ + ++I L K +F + NL+ R+
Sbjct: 61 FFKWVESNLNHKHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIH 120
Query: 59 DNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHV 117
D+P S ++ ++F Y + + +A+ F + G K + C L+++L + +
Sbjct: 121 DDPDSNSQILSWLVIF--YANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKAR-- 176
Query: 118 IEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
+ + K + G+V I+N+++ K K + EM+ R + DL
Sbjct: 177 --LTNMVWKVYKKMVRVGVVP--NIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDL 232
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
+Y+ + + CK G ++A+ + M++ G+ D+V YN++I + A+R++RE
Sbjct: 233 FTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFRE 292
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-K 294
+ G P+ VT T+I C + EA + M +G P V+TY+ R C E K
Sbjct: 293 IN--GATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGK 350
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
++ L + M E + P T L+ + + G + V KKM E G PD+F + A
Sbjct: 351 IKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKA 410
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLS 381
L+ +D A+++ EM G S
Sbjct: 411 LIHGFCKLHEVDSAKEFLFEMLDAGFS 437
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 113/282 (40%), Gaps = 31/282 (10%)
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQ 121
+ PNH T+ + Y + + EA+ ++ GL V +Y +++ LCE + +A
Sbjct: 296 ATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDAN 355
Query: 122 ELC--FGENK----------------NVGFSGLVEMNKTKI-----------YNMILRGW 152
L E K +G G K K+ + ++ G+
Sbjct: 356 RLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGF 415
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K+ +EF EM G +YS +D ++L E+ +KG+ +D+
Sbjct: 416 CKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDI 475
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
Y +IR + + ++ A R++ M+ G + V ++ + G+ A +L E
Sbjct: 476 SVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDE 535
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREILGLF-DRMIESGIRPK 313
M K+ + + Y CF ILGLF D +IE + K
Sbjct: 536 MDKRRLMITLKIYRCFSASYAGDGSILGLFWDHVIERRLISK 577
>gi|147776740|emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]
Length = 422
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 184/410 (44%), Gaps = 28/410 (6%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+ L +D A E F+ +F H+ +++ +I LG +F L +L+ R+K
Sbjct: 18 QKLIASQSDPLLAKEIFDLASLQPNFKHSYSSFHILILKLGWARQFSLMQDLLMRLKSEQ 77
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
SI N + F + + Y A+L ++A+ TF+ + +F K + N L+ L +++ I
Sbjct: 78 YSI-NPSLFSDIIEIYGEANLPDQALKTFHSMLQFHSKPLPKHLNXLLQLLVSHRNYIRP 136
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
F G S TK YN+++ + + +M KR V D+ SY
Sbjct: 137 AFDLFKSAHRYGVSP-----DTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESY 191
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
I M +C+ + +AV L ++M KG D ++Y T++ ++ + + A ++ M+
Sbjct: 192 RILMQGLCRKSQVNRAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLKEAYKLLCRMKV 251
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG 300
GC P +V NTVI C GR +A VL +MP GC P++++Y L G
Sbjct: 252 KGCNPDIVHYNTVILGFCREGRXLDACKVLEDMPSNGCSPNLMSYGTLVSGLCDQ----G 307
Query: 301 LFD-------RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
L+D M+ G P + L+ F G L V +M G + +
Sbjct: 308 LYDEAKNYVEEMLSKGFSPHFSVFHALINGFCNVGKLEEACEVLXEMLRHGEAXHTETWV 367
Query: 354 ALVDAL--IDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
A++ + +DK ++ M +DE + L P T+LV+ G+ E+
Sbjct: 368 AIIPRICEVDK-LVRMENIFDEXL---KLEITP----NTRLVEAGIGLEE 409
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 172/398 (43%), Gaps = 24/398 (6%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C RALE + TYN+VI + ++ M++ P
Sbjct: 127 CATGKPVRALELLRQMPRP-----NAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAP 181
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-----YCNLVDALCEYKHVIEA 120
+ T+ + + + +A+ F DE K EV+ Y L+ C+ +
Sbjct: 182 DKYTYATLISGWCKIGRMEDAVKVF---DEMLTKGEVAPSAVMYNALIGGYCDVGKL--- 235
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
++ +++ G+ T YN+++ F + EEM K G D+ +Y
Sbjct: 236 -DVALQYREDMVQRGIAMTVAT--YNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTY 292
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+I ++ CK G KA+++++EM +KG++ V Y ++I V R++ +
Sbjct: 293 NILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVK 352
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR---CLEKPRE 297
G +P VV N +I C G + AY ++AEM KK PD +TY+ R L + E
Sbjct: 353 KGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDE 412
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
L D M + GI+P + +Y L+ + G ++ V +M + G +P YNAL+
Sbjct: 413 ARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQ 472
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
L D A +EM AKG++ P + L++G
Sbjct: 473 GLCKIRQGDDAENLMKEMVAKGIT--PDDSTYISLIEG 508
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 81/187 (43%), Gaps = 36/187 (19%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A L+ ++ + + + +N ++R + + A+ + R+M +P+ VT NTVI
Sbjct: 100 AFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIA 155
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMD 315
C GRV+ A V+ EM ++G GI P
Sbjct: 156 GFCARGRVQAALEVMREMRERG-------------------------------GIAPDKY 184
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELG-CSPDEFAYNALVDALIDKGMLDMARKYDEE 374
TY L+ + + G + V+ +M G +P YNAL+ D G LD+A +Y E+
Sbjct: 185 TYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYRED 244
Query: 375 MFAKGLS 381
M +G++
Sbjct: 245 MVQRGIA 251
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 176/420 (41%), Gaps = 59/420 (14%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + K++L F + V F +Y ++++ L K E + L+ RM ++ S+ P
Sbjct: 213 CLKGEVKKSLHFHDKVVAQ-GFQMNQVSYGTLLNGLCKIGETRCAIKLL-RMIEDRSTRP 270
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELC 124
+ + + LVNEA + +++ G+ D ++Y L+ C ++ A
Sbjct: 271 DVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGA---- 326
Query: 125 FGENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
FS L EM I Y +++ K + + M K GV ++
Sbjct: 327 --------FSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVV 378
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+YS MD C G+ A +++ M + + V +YN +I + + VD AM + REM
Sbjct: 379 TYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREM 438
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI 298
P+ VT N++I LC++GR+ A ++ E+ +G DVITY L K + +
Sbjct: 439 LHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNL 498
Query: 299 ---LGLFDRMIESGIRPKMDTYVMLLRKFGRW---------------------------- 327
+ LF +M E GI+P TY L+ +
Sbjct: 499 DKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVM 558
Query: 328 -------GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G L + KME+ GC PD + ++ +L +K D A K EM AKGL
Sbjct: 559 IGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 618
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 113/242 (46%), Gaps = 3/242 (1%)
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
T I +++G K F +++ +G + SY ++ +CK G+ A+KL +
Sbjct: 202 TIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLR 261
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
++ + + DVV YNT+I + + V+ A Y EM G P V+T +T+I C G
Sbjct: 262 MIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAG 321
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYV 318
++ A+++L EM K PDV TY L K +E L M + G++P + TY
Sbjct: 322 QLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYS 381
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
L+ + G + ++ M + +P +YN +++ L +D A EM K
Sbjct: 382 TLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHK 441
Query: 379 GL 380
+
Sbjct: 442 NV 443
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 115/251 (45%), Gaps = 10/251 (3%)
Query: 138 EMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAV 197
+MN+ Y +L G K+ + ++ R D+ Y+ +D +CK +A
Sbjct: 234 QMNQVS-YGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAY 292
Query: 198 KLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLL 257
Y EM +GI DV+ Y+T+I ++ + A + EM P V T +I L
Sbjct: 293 DFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDAL 352
Query: 258 CENGRVREAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESGIR 311
C+ G+++EA +L M K+G P+V+TY +C + ++I F M+++ +
Sbjct: 353 CKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQI---FHAMVQTEVN 409
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
P + +Y +++ + + + ++M P+ YN+L+D L G + A
Sbjct: 410 PSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDL 469
Query: 372 DEEMFAKGLSA 382
+E+ +G A
Sbjct: 470 MKELHHRGQPA 480
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 121/269 (44%), Gaps = 8/269 (2%)
Query: 133 FSGLVEMNKTKI---YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
F+G++ M T + IL KM + ++M+ +G+ DL + SI ++ C
Sbjct: 120 FNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCH 179
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
G+ + + ++ K G + + + T+++ + + V ++ + ++ G Q + V+
Sbjct: 180 LGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVS 239
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMI 306
T++ LC+ G R A +L + + PDV+ Y+ L K + E + M
Sbjct: 240 YGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMN 299
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
GI P + TY L+ F G L F + +M +PD + Y L+DAL +G L
Sbjct: 300 SRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLK 359
Query: 367 MARKYDEEMFAKGLSAKPREELGTKLVQG 395
A+ M +G+ KP + L+ G
Sbjct: 360 EAKNLLGVMTKEGV--KPNVVTYSTLMDG 386
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 167/375 (44%), Gaps = 54/375 (14%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQEL 123
P T+ I+ AH A+ F +L GL+ ++ N L+ CE K EA ++
Sbjct: 113 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 172
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVV--KDLHSYS 181
+G + Y+++L+ G+ + M + G V D+ +Y+
Sbjct: 173 LLHRTPELGC-----VPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYT 227
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI------RAVG---------VSE 226
+D K G KA L+KEM ++GI D+V Y++V+ RA+G V++
Sbjct: 228 TVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNK 287
Query: 227 GV--------------------DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
GV A+RV++EMR P VVT N ++ LC+ G+++EA
Sbjct: 288 GVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEA 347
Query: 267 YAVLAEMPKKGCVPDVITYHCFFR------CLEKPREILGLFDRMIESGIRPKMDTYVML 320
V M KG PDV +Y CL ++ LFD M+ GI P + T+ +L
Sbjct: 348 RDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLV---DMTDLFDLMLGDGIAPDIYTFSVL 404
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
++ + G L +++ +M + G PD Y ++ AL G +D A + +M +G+
Sbjct: 405 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGV 464
Query: 381 SAKPREELGTKLVQG 395
+ P + L+QG
Sbjct: 465 A--PDKYAYHCLIQG 477
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 168/396 (42%), Gaps = 62/396 (15%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+SV+ L K + + +M N +P++ T+ + Y + EA+ F +
Sbjct: 260 TYSSVVHALCKARAMGKAEAFLRQMV-NKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKE 318
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL-----CFGENKNVGFSGLVEMNKTKIYN 146
+ L D V+ L+ +LC+Y + EA+++ G+N +V FS Y
Sbjct: 319 MRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDV-FS----------YK 367
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++L G+ + ++ M G+ D++++S+ + G KA+ ++ EM+
Sbjct: 368 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDH 427
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS-------------------- 246
G+K DVV Y TVI A+ +D AM + +M + G P
Sbjct: 428 GVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKA 487
Query: 247 ---------------VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------ 285
+V +++I LC+ GR+ +A + G PD + Y
Sbjct: 488 KELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDG 547
Query: 286 HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
+C +EK L +FD M+ +GI P + Y L+ + + G + ++++M + G
Sbjct: 548 YCLVGKMEKA---LRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGI 604
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
P YN ++D L G A+ EM G++
Sbjct: 605 KPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIA 640
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 146/322 (45%), Gaps = 14/322 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ TF ++ K Y ++++AM FN++ + G+K D V+Y ++ ALC + +A E
Sbjct: 396 PDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEK 455
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + + G + Y+ +++G+ K +E E+ G+ D+ +S
Sbjct: 456 -FNQMIDQGVA-----PDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSI 509
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
++ +CK G+ A ++ G D V Y+ ++ + ++ A+RV+ M G
Sbjct: 510 INNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 569
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL-----EKPREI 298
+P+VV T++ C+ GR+ E ++ EM +KG P I Y+ L P ++
Sbjct: 570 EPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKV 629
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
F M ESGI TY ++LR F + ++K++ + D N ++
Sbjct: 630 --KFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAG 687
Query: 359 LIDKGMLDMARKYDEEMFAKGL 380
+ ++ A+ + GL
Sbjct: 688 MFQTRRVEEAKDLFASISRSGL 709
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 131/288 (45%), Gaps = 43/288 (14%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +VI L + + D + ++M D + P+ + + + + T + +A +
Sbjct: 435 TYTTVIAALCRIGKMDDAMEKFNQMIDQGVA-PDKYAYHCLIQGFCTHGSLLKAKELILE 493
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G++ D V + ++++ LC+ +++AQ + F NVG + +Y+M++ G
Sbjct: 494 IMNNGMRLDIVFFSSIINNLCKLGRIMDAQNI-FDLTVNVG-----QHPDAVVYSMLMDG 547
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + K ++ M G+ ++ Y ++ CK G+ + + L++EM +KGIK
Sbjct: 548 YCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS 607
Query: 212 VVAYNTVIRAVGVS---------------EGV--------------------DFAMRVYR 236
+ YN +I + V+ G+ D A+ +++
Sbjct: 608 TILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFK 667
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
E+R M + ++T NT+I + + RV EA + A + + G VP V+T
Sbjct: 668 ELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 157/350 (44%), Gaps = 9/350 (2%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY S+ID LGK + D ++ L +M D + N + + + + + F +
Sbjct: 326 TYCSLIDGLGKKGQVDEAYRLFEKMLDAGHN-ANPVVYTSLIRNFFIHGRKEDGHKVFKE 384
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
L G K +++ N +E + F + ++ GF + + Y++++ G
Sbjct: 385 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGF-----LPDVRSYSILIHGL 439
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K + + M ++G D +Y+ +D CKSGK KA ++ +EMK+K ++ V
Sbjct: 440 TKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 499
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
Y ++ + + +D A ++ E + G + +VV +++I + GR+ EAY +L E
Sbjct: 500 ATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE 559
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M KKG P+V T++ L K EI L F M E P TY +L+ R
Sbjct: 560 MMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQK 619
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
FV W+ M++ G P+ Y ++ L G + A E A G
Sbjct: 620 YNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANG 669
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 185/412 (44%), Gaps = 38/412 (9%)
Query: 4 LSCYANDWK--RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
L+C K AL F ++ D + TYN +ID+L + ++ ++ M ++
Sbjct: 227 LTCLGKKRKVDEALSLFEVMKKDAE--PNSSTYNIIIDMLCLGGRVEEAYRILDEM-EHA 283
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA 120
S PN T IM R A + EA F + G D V+YC+L+D L + V EA
Sbjct: 284 SLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEA 343
Query: 121 QELC-----FGENKN-VGFSGLV--------EMNKTKIYN-MILRGW------------- 152
L G N N V ++ L+ + + K++ +I RG
Sbjct: 344 YRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDC 403
Query: 153 -FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
FK K R +E++ G + D+ SYSI + + K+G+ + ++ MK++G +D
Sbjct: 404 VFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALD 463
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
AYN V+ S V A + EM+E QP+V T ++ L + R+ EAY +
Sbjct: 464 ARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFE 523
Query: 272 EMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
E KG +V+ Y F + + E + + M++ G+ P + T+ LL +
Sbjct: 524 EAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAE 583
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ V ++ M+E+ C P+ + Y+ L++ L + A + ++M +GL
Sbjct: 584 EINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGL 635
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 170/371 (45%), Gaps = 27/371 (7%)
Query: 21 VETDCHFTHTTD---------TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
V+ C F H +Y S+I +L K + L +M + S+P +
Sbjct: 131 VDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQM-EAERSVPCAYAYN 189
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKN 130
M Y +A +A +L E G + VS+ +++ L + + V EA L K+
Sbjct: 190 TMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD 249
Query: 131 VGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFW---EEMDKRGVVKDLHSYSIYMDIM 187
E N + YN+I+ + G+ E + +EM+ + +L + +I +D +
Sbjct: 250 A------EPNSS-TYNIIID---MLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRL 299
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
CK+ K +A K+++ ++G D V Y ++I +G VD A R++ +M + G +
Sbjct: 300 CKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANP 359
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDR 304
V ++I+ +GR + + V E+ ++GC PD+ + + C+ K E+ +F+
Sbjct: 360 VVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFED 419
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
+ G P + +Y +L+ + G R ++ M++ G + D AYNA+VD G
Sbjct: 420 IRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGK 479
Query: 365 LDMARKYDEEM 375
+ A + EEM
Sbjct: 480 VHKAYEILEEM 490
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 159/340 (46%), Gaps = 15/340 (4%)
Query: 49 LSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNL 107
L+ ++ R+K P+ + + ++ A A+ ++ E G + V + L
Sbjct: 31 LAVAVMRRLKFRPA----FSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTL 86
Query: 108 VDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEE 167
V AL V +A L E K G +YN+ + + K +F+ E
Sbjct: 87 VRALAREGQVADALAL-VDEVK-----GSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHE 140
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
+ +G+ D SY+ + ++CK+G+ +A +L+ +M+ + AYNT+I G +
Sbjct: 141 LKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGR 200
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
+ A ++ +RE GC PSVV+ N+++ L + +V EA + L E+ KK P+ TY+
Sbjct: 201 FEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALS-LFEVMKKDAEPNSSTYNI 259
Query: 288 FFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
L + E + D M + + P + T +++ + + L + +++ + G
Sbjct: 260 IIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRG 319
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
C+PD Y +L+D L KG +D A + E+M G +A P
Sbjct: 320 CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANP 359
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 129/264 (48%), Gaps = 8/264 (3%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F +Y+ +I L K + + N+ H MK ++ A + + + + V++A
Sbjct: 425 FLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARA-YNAVVDGFCKSGKVHKA 483
Query: 87 MGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
++ E ++ V +Y +VD L + + EA L F E K+ G +E+N +Y
Sbjct: 484 YEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYML-FEEAKSKG----IELNVV-LY 537
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
+ ++ G+ K+ + EEM K+G+ ++++++ +D + K+ + +A+ ++ MK+
Sbjct: 538 SSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKE 597
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+ Y+ +I + + + A +++M++ G P+VVT T+I L + G + +
Sbjct: 598 MKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITD 657
Query: 266 AYAVLAEMPKKGCVPDVITYHCFF 289
AY++ G +PD +++
Sbjct: 658 AYSLFERFKANGGIPDAASFNALI 681
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 111/262 (42%), Gaps = 14/262 (5%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F YN+V+D K + ++ ++ MK+ P AT+ + ++EA
Sbjct: 460 FALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQ-PTVATYGAIVDGLAKIDRLDEA 518
Query: 87 MGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
F + G++ + V Y +L+D + + EA L E G + V +
Sbjct: 519 YMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAY-LILEEMMKKGLTPNV-----YTW 572
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N +L K + ++ M + + ++YSI ++ +C+ K KA +++M+K
Sbjct: 573 NSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQK 632
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+G+ +VV Y T+I + + A ++ + G P + N +I+ + R E
Sbjct: 633 QGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAME 692
Query: 266 AY-AVLAEMPKKGC-----VPD 281
AY + ++ C VPD
Sbjct: 693 AYQTTVYQLSSSSCSWNFLVPD 714
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 83/187 (44%), Gaps = 3/187 (1%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
AV M++ + AY +I A+ + + A+ + R+M+E+G + V T+++
Sbjct: 29 AVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVR 88
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRP 312
L G+V +A A++ E+ PD++ Y+ C K + F + G++P
Sbjct: 89 ALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKP 148
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
+Y ++ + G L ++ +ME P +AYN ++ G + A K
Sbjct: 149 DDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLL 208
Query: 373 EEMFAKG 379
E + +G
Sbjct: 209 ERLRERG 215
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 146/318 (45%), Gaps = 8/318 (2%)
Query: 69 TFRIMFKRYVTAHLVNEAMG-TFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFG 126
TF + K ++AM ++ E +V C L+ LC+ EA EL
Sbjct: 124 TFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHM 183
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
+ G ++ Y ++ G+FK K + EM R + D+ +YS +
Sbjct: 184 MADDRGGGSAPDVVS---YTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAA 240
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+CK KA+++ M K G+ + + YN+++ SE A+ ++MR G +P
Sbjct: 241 LCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPD 300
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFD 303
VVT N+++ LC+NGR EA + M K+G PD+ TY + E+ L D
Sbjct: 301 VVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLD 360
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
M+ +GI P + +L+ + + + +V+ KM + G +P+ Y A++ L G
Sbjct: 361 LMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSG 420
Query: 364 MLDMARKYDEEMFAKGLS 381
+D A Y E+M +GL+
Sbjct: 421 SVDDAMLYFEQMIDEGLT 438
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 171/408 (41%), Gaps = 82/408 (20%)
Query: 50 SWNLIHRMKDN--PSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK-LDEFGLKDEVSYCN 106
+ L+H M D+ S P+ ++ + + ++A T+++ LD D V+Y +
Sbjct: 177 ALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSS 236
Query: 107 LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE 166
++ ALC+ + + +A E+ KN G+ M YN IL G+ + F +
Sbjct: 237 IIAALCKGQAMDKAMEVLTTMVKN----GV--MPNCMTYNSILHGYCSSEQPKEAIGFLK 290
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY----------- 215
+M GV D+ +Y+ MD +CK+G+ +A K++ M K+G++ D+ Y
Sbjct: 291 KMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKG 350
Query: 216 ------------------------NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
N +I A E VD AM V+ +MR+ G P+VVT
Sbjct: 351 ALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYG 410
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCLEKPREIL------ 299
VI +LC++G V +A +M +G P++I Y C F +K E++
Sbjct: 411 AVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDR 470
Query: 300 --------------------------GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
LFD M+ G++P + TY L+ + G +
Sbjct: 471 GICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEA 530
Query: 334 FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ M +G PD YN L++ +D A +EM + G+S
Sbjct: 531 TKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVS 578
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 147/320 (45%), Gaps = 10/320 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+H F I+ Y V+EAM F+K+ + GL + V+Y ++ LC+ V +A L
Sbjct: 369 PDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAM-L 427
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + + G + +Y ++ W K E EM RG+ + ++
Sbjct: 428 YFEQMIDEGLT-----PNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSI 482
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ CK G+ ++ KL+ M + G+K +V+ Y+T+I ++ +D A ++ M +G
Sbjct: 483 IHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGM 542
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG--- 300
+P VT NT+I C R+ +A A+ EM G P++ITY+ + L R
Sbjct: 543 KPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 602
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L+ + +SG + ++ TY ++L + +++ + + +N ++ AL+
Sbjct: 603 LYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 662
Query: 361 DKGMLDMARKYDEEMFAKGL 380
G D A+ + GL
Sbjct: 663 KVGRNDEAKDLFVAFSSNGL 682
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 112/279 (40%), Gaps = 53/279 (18%)
Query: 165 WEEMDKRG---VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
+ M + G V +H+Y I + C++G+ + KKG +++ + + +++
Sbjct: 72 YNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKG 131
Query: 222 VGVSEGVDFAMR-VYREMREMGCQPSVVTCNTVIKLLCENGRVRE--------------- 265
+ + AM V R M E+ C P V +C ++K LC+ R +E
Sbjct: 132 LCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGG 191
Query: 266 -----------------------AYAVLAEMPKKGCVPDVITYH------CFFRCLEKPR 296
AY+ EM + PDV+TY C + ++K
Sbjct: 192 SAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAM 251
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
E+L M+++G+ P TY +L + + KKM G PD YN+L+
Sbjct: 252 EVL---TTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLM 308
Query: 357 DALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
D L G ARK + M +GL +P L+QG
Sbjct: 309 DYLCKNGRSTEARKIFDSMTKRGL--EPDIATYCTLLQG 345
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 159/396 (40%), Gaps = 48/396 (12%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + A+ +F + D T Y S+I L F ++D + LI M D +
Sbjct: 417 CKSGSVDDAMLYFEQM-IDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICL- 474
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELC 124
N F + + V E+ F+ + G+K V +Y L+D C + EA +L
Sbjct: 475 NTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKL- 533
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+VG YN ++ G+ ++S ++EM GV ++ +Y+I +
Sbjct: 534 LSSMFSVGMK-----PDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 588
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ + + A +LY + K G ++++ YN ++ + + D A+R+++ + Q
Sbjct: 589 QGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 648
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDR 304
T N +I L + GR EA + G VP+ TY + +
Sbjct: 649 LETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL-------------MAEN 695
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
+I G+ ++D ++ ME+ GC+ D N +V L+ +G
Sbjct: 696 IIGQGLLEELDQ-------------------LFFSMEDNGCTVDSGMLNFIVRELLQRGE 736
Query: 365 LDMARKY----DEEMFAKGLSAKPREELGTKLVQGG 396
+ A Y DE+ F+ S L L+ GG
Sbjct: 737 ITRAGTYLSMIDEKHFSLEASTA---SLFIDLLSGG 769
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 179/395 (45%), Gaps = 58/395 (14%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY V++ L K L+ +L +M++ + + I+ ++A+ FN+
Sbjct: 212 TYGPVLNRLCKSGNSALALDLFRKMEERNIK-ASVVQYSIVIDSLCKDGSFDDALSLFNE 270
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC---FGEN---KNVGFSGLVEMNKTKIY 145
++ G+K D V+Y +L+ LC + ++ G N V FS L+++
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDV------ 324
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
+ K + +E + EM RG+ D +Y+ +D CK +A +++ M
Sbjct: 325 ------FVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
KG + D+V Y+ +I + ++ VD MR++RE+ G P+ +T NT++ C++G++
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 438
Query: 266 AYAVLAEMPKKGCVPDVITYHCF----------------FRCLEKPREILG--------- 300
A + EM +G P V+TY F ++K R LG
Sbjct: 439 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 498
Query: 301 -------------LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
LF + + G++P + TY +++ + G L ++++KM+E GC+P
Sbjct: 499 GMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP 558
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
D+F YN L+ A + L + + EEM G SA
Sbjct: 559 DDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSA 593
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 142/311 (45%), Gaps = 16/311 (5%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
P+ T+ + R + A+ F K++E +K V Y ++D+LC+ +A L
Sbjct: 208 PDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSL 267
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F E + G V Y+ ++ G W + EM R ++ D+ ++S
Sbjct: 268 -FNEMEMKGIKADV-----VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D+ K GK +A +LY EM +GI D + YN++I + A +++ M GC
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCLEKPRE 297
+P +VT + +I C+ RV + + E+ KG +P+ ITY+ C L +E
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
LF M+ G+ P + TY +LL G L +++KM++ + YN ++
Sbjct: 442 ---LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 498
Query: 358 ALIDKGMLDMA 368
+ + +D A
Sbjct: 499 GMCNASKVDDA 509
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 133/292 (45%), Gaps = 25/292 (8%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK--------TKIYNMILRG 151
D +++ LV+ C V EA L +VEM + T I + L+G
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVAL---------VDRMVEMKQRPDLVTVSTLINGLCLKG 189
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + M + G D +Y ++ +CKSG A+ L+++M+++ IK
Sbjct: 190 RVSEALV-----LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKAS 244
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
VV Y+ VI ++ D A+ ++ EM G + VVT +++I LC +G+ + +L
Sbjct: 245 VVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 304
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM + +PDV+T+ K ++L L++ MI GI P TY L+ F +
Sbjct: 305 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
L ++ M GC PD Y+ L+++ +D + E+ +KGL
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 3/220 (1%)
Query: 164 FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
F + M+ G+ D+++ +I ++ C+ K A + K G + D + ++T++
Sbjct: 92 FCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFC 151
Query: 224 VSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVI 283
+ V A+ + M EM +P +VT +T+I LC GRV EA ++ M + G PD +
Sbjct: 152 LEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEV 211
Query: 284 TYHCFFRCLEKPRE---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
TY L K L LF +M E I+ + Y +++ + G ++ +M
Sbjct: 212 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 271
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
E G D Y++L+ L + G D K EM + +
Sbjct: 272 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 311
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 117/270 (43%), Gaps = 14/270 (5%)
Query: 31 TDTYNSVIDILGK---FFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAM 87
T TYNS+ID K E + ++L+ + P+ T+ I+ Y A V++ M
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMV----SKGCEPDIVTYSILINSYCKAKRVDDGM 405
Query: 88 GTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYN 146
F ++ GL + ++Y LV C+ + A+EL F E + G V Y
Sbjct: 406 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL-FQEMVSRGVPPSV-----VTYG 459
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++L G K E +E+M K + + Y+I + MC + K A L+ + K
Sbjct: 460 ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 519
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
G+K DVV YN +I + + A ++R+M+E GC P T N +I+ + +
Sbjct: 520 GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS 579
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCLEKPR 296
++ EM G D T L R
Sbjct: 580 VELIEEMKVCGFSADSSTIKMVIDMLSDRR 609
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 3/185 (1%)
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
K M+ GI+ D+ +I + + FA V ++G +P +T +T++ C
Sbjct: 94 KGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLE 153
Query: 261 GRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTY 317
GRV EA A++ M + PD++T CL+ + E L L DRM+E G +P TY
Sbjct: 154 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 213
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
+L + + G +++KMEE Y+ ++D+L G D A EM
Sbjct: 214 GPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEM 273
Query: 378 KGLSA 382
KG+ A
Sbjct: 274 KGIKA 278
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 7/185 (3%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A+ L++ M + + +N + AV ++ D + + M G + + T +I
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 113
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRP 312
C ++ A++VL K G PD IT+ CLE + E + L DRM+E RP
Sbjct: 114 CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 173
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG----MLDMA 368
+ T L+ G + V+ +M E G PDE Y +++ L G LD+
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 369 RKYDE 373
RK +E
Sbjct: 234 RKMEE 238
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 167/366 (45%), Gaps = 37/366 (10%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
++ S+I+ +F ++H+MK + F +MFK Y AHL +A+ F++
Sbjct: 63 SFYSLIESHASSLDFRSLEEVLHQMK-RERRVFLEKNFIVMFKAYGKAHLPEKAVDLFHR 121
Query: 93 L-DEFGLKDEVSYCNLV-----------DALCEYKHVIEAQELCFGENKNVGFSGLVEMN 140
+ EF K V N V AL Y HV+ ++ L N+ + L
Sbjct: 122 MWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSL------NIHPNALT--- 172
Query: 141 KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
+N++++ ++ K E + E+ R D ++YS M +CK + +AV L
Sbjct: 173 ----FNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLL 228
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
EM+ +G ++VA+N +I A+ + A ++ M GC P+ VT N ++ LC
Sbjct: 229 DEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLK 288
Query: 261 GRVREAYAVLAEMPKKGCVPDVITYHCFF-------RCLEKPREILGLFDRMIESGIRPK 313
G++ +A ++L +M CVP+ +T+ R + R ++ L R G R
Sbjct: 289 GKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEAR----GHRGN 344
Query: 314 MDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDE 373
Y L+ + G +WK+M GC P+ Y+AL+D L +G LD AR +
Sbjct: 345 EYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLS 404
Query: 374 EMFAKG 379
EM KG
Sbjct: 405 EMKNKG 410
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 162/377 (42%), Gaps = 16/377 (4%)
Query: 12 KRALEFFN--WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLI-HRMKDNPSSI-PNH 67
++A++ F+ W E C T ++NSV++++ + F+ + H + +I PN
Sbjct: 113 EKAVDLFHRMWGEFQC--KQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNA 170
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLD-EFGLKDEVSYCNLVDALCEYKHVIEAQELCFG 126
TF ++ K LV++A+ F ++ D +Y L+ LC+ + + EA L
Sbjct: 171 LTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDE 230
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
F LV +N+++ K G+ + + M +G V + +Y+ +
Sbjct: 231 MQVEGTFPNLVA------FNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHG 284
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+C GK KAV L +M + V + T+I + RV + G + +
Sbjct: 285 LCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGN 344
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFD 303
+++I LC+ G+ +A + EM KGC P+ I Y C E K E G
Sbjct: 345 EYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLS 404
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
M G P TY L+R + G +VWK+M C +E Y+ L++ L G
Sbjct: 405 EMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDG 464
Query: 364 MLDMARKYDEEMFAKGL 380
A ++M ++G+
Sbjct: 465 KFMEALMVWKQMLSRGI 481
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 157/353 (44%), Gaps = 41/353 (11%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN+++ L + + + +L+++M N +PN TF + +V ++
Sbjct: 277 TYNALVHGLCLKGKLEKAVSLLNQMVSN-KCVPNDVTFGTLINGFVMQGRASDGTRVLVS 335
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL--------CFGENKNVGFSGLVE----- 138
L+ G + +E Y +L+ LC+ +A EL C G N V +S L++
Sbjct: 336 LEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGC-GPNTIV-YSALIDGLCRE 393
Query: 139 ------------------MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+ + Y+ ++RG+F+ K W+EM + + Y
Sbjct: 394 GKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCY 453
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
SI ++ +CK GK +A+ ++K+M +GIK+DVVAY+++I + V+ ++++ +M
Sbjct: 454 SILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLC 513
Query: 241 MG--CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---- 294
G QP V+T N ++ C + A +L M +GC PD IT F + L +
Sbjct: 514 QGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNP 573
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
P++ D ++ ++ + + + FL P W + + C P
Sbjct: 574 PQDGREFLDELVVRLVKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQVCKP 626
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 5/210 (2%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+Y+ ++ G K + + E W+EM +G + YS +D +C+ GK +A EM
Sbjct: 347 VYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEM 406
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
K KG + Y++++R + A+ V++EM C + V + +I LC++G+
Sbjct: 407 KNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKF 466
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESG--IRPKMDTYV 318
EA V +M +G DV+ Y + L LF++M+ G ++P + TY
Sbjct: 467 MEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYN 526
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
+LL F + + M + GC PD
Sbjct: 527 ILLNAFCIQKSIFRAIDILNIMLDQGCDPD 556
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 82/412 (19%), Positives = 155/412 (37%), Gaps = 77/412 (18%)
Query: 11 WKRALEFFNWV--ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP--SSIPN 66
+ RALEF+N V + T+N VI + + D + I ++ P + P+
Sbjct: 148 FNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKA---IEVFREIPLRNCAPD 204
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLD-EFGLKDEVSYCNLVDALCEYKHVIEAQEL-- 123
+ T+ + ++EA+ +++ E + V++ L+ ALC+ + A +L
Sbjct: 205 NYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVD 264
Query: 124 ---------------------CFGENKNVGFSGLVEMNKTK------IYNMILRGWFKMS 156
C S L +M K + ++ G+
Sbjct: 265 NMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQG 324
Query: 157 WWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
++ RG + + YS + +CK GK +A++L+KEM KG
Sbjct: 325 RASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKG--------- 375
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
C P+ + + +I LC G++ EA L+EM K
Sbjct: 376 --------------------------CGPNTIVYSALIDGLCREGKLDEARGFLSEMKNK 409
Query: 277 GCVPDVITYHC----FFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
G +P+ TY +F + + IL ++ M + Y +L+ + G
Sbjct: 410 GYLPNSFTYSSLMRGYFEAGDSHKAIL-VWKEMANNNCIHNEVCYSILINGLCKDGKFME 468
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
+VWK+M G D AY++++ + +++ K +M +G +P
Sbjct: 469 ALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQP 520
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 119/238 (50%), Gaps = 6/238 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN+++ G+ K K E E M V D+ +Y+ + +C SGK +A+++
Sbjct: 179 YNVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQL 235
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
++ DV+ Y +I A GV AM++ EMR+ GC+P VVT N +I +C+ GR+
Sbjct: 236 QRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLD 295
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLL 321
EA L MP GC P+VIT++ R + + L M+ G P + T+ +L+
Sbjct: 296 EAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILI 355
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R L V +KM + GC P+ +YN L+ + +D A +Y E M ++G
Sbjct: 356 NFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRG 413
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 125/243 (51%), Gaps = 9/243 (3%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDK---RGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
YN ILR + GK +E E +D+ R D+ +Y+I ++ C +A+KL
Sbjct: 211 YNTILRS---LCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLD 267
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
EM+KKG K DVV YN +I + +D A++ M GC+P+V+T N +++ +C G
Sbjct: 268 EMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTG 327
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYV 318
R +A +L++M +KGC P V+T++ L + R + + + ++M + G P +Y
Sbjct: 328 RWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYN 387
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
LL F + + + M GC PD YN L+ AL G +D A + ++ +K
Sbjct: 388 PLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSK 447
Query: 379 GLS 381
G S
Sbjct: 448 GCS 450
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 158/361 (43%), Gaps = 14/361 (3%)
Query: 6 CYANDWKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C + K A+E + ++ +C+ TY +I+ + L+ M+
Sbjct: 219 CDSGKLKEAMEVLDRQLQRECY--PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCK- 275
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV-DALCEYKHVIEAQEL 123
P+ T+ ++ ++EA+ N + +G K V N++ ++C ++A+ L
Sbjct: 276 PDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERL 335
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ G S V +N+++ + G+ + E+M K G V + SY+
Sbjct: 336 -LSDMLRKGCSPSV-----VTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPL 389
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ C+ K +A++ + M +G D+V YNT++ A+ VD A+ + ++ GC
Sbjct: 390 LHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGC 449
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILG 300
P ++T NTVI L + G+ A +L EM +KG PD+ITY R L K E +
Sbjct: 450 SPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIK 509
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+F M I+P TY ++ + M E GC P E Y L++ +
Sbjct: 510 IFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIA 569
Query: 361 D 361
D
Sbjct: 570 D 570
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 113/239 (47%), Gaps = 6/239 (2%)
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N+ LR + + +F E M +G + D+ + + + C+SGK KA ++ + ++
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G DV+ YN +I S +D A+ V + M P VVT NT+++ LC++G+++E
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKALEV---LERMSVAPDVVTYNTILRSLCDSGKLKE 226
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLR 322
A VL ++ C PDVITY + + L D M + G +P + TY +L+
Sbjct: 227 AMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 286
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ G L M GC P+ +N ++ ++ G A + +M KG S
Sbjct: 287 GICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCS 345
>gi|326513966|dbj|BAJ92133.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 537
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 172/374 (45%), Gaps = 17/374 (4%)
Query: 15 LEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
++ +W + T N V+ LG+ F + M+ N P+ T +I+
Sbjct: 121 VDLLDWAICSAKLRPSVQTCNIVVRALGRRKFFTSVEPALEVMRKN-GVFPDLTTLQIIM 179
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGLKDEVS------YCNLVDALCEYKHVIEAQELCFGEN 128
V A VN+A+ D+FG+ E + + L++ LC HV A L
Sbjct: 180 DTLVAARQVNKAVQMLES-DQFGIGIEKTCHRKEAFSALIECLCRRSHVGVASSLV---- 234
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
++K ++YN +L GW + K + FW M + G+V D S+ ++ +
Sbjct: 235 -QAARGQPFHLDK-QVYNDVLGGWARFGRVDKLQHFWAMMLEDGLVPDDVSHCHLIEALG 292
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
++G+ +A++++++M ++G +AYN ++ +D +++ Y++M + C P+
Sbjct: 293 RAGQAEEALRVFEKMVQEGYGPTTMAYNALVFNFISVGDLDRSIKYYKDMVDNNCPPNSD 352
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRM 305
T +I+ L + RV +A + +M +G +PD F L P L ++ +
Sbjct: 353 TYCKMIRALLKTRRVADALQMFDDMLAQGVLPDTGIITSFIEPLCTFGPPHAALMIYQKS 412
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
++G + TY +LL + R+G V +W++M+E G D+ Y +V+ L + G +
Sbjct: 413 RKAGCTISLKTYKLLLERLARFGKSGTVLNIWEEMQESGYPSDKEIYEFIVNGLCNVGKV 472
Query: 366 DMARKYDEEMFAKG 379
D A EE KG
Sbjct: 473 DAAVFVVEESLRKG 486
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 103/243 (42%), Gaps = 9/243 (3%)
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N+++R + ++ E M K GV DL + I MD + + + KAV++ E +
Sbjct: 141 NIVVRALGRRKFFTSVEPALEVMRKNGVFPDLTTLQIIMDTLVAARQVNKAVQML-ESDQ 199
Query: 206 KGIKMDVV-----AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
GI ++ A++ +I + V A + + R N V+
Sbjct: 200 FGIGIEKTCHRKEAFSALIECLCRRSHVGVASSLVQAARGQPFHLDKQVYNDVLGGWARF 259
Query: 261 GRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTY 317
GRV + A M + G VPD +++ L + E L +F++M++ G P Y
Sbjct: 260 GRVDKLQHFWAMMLEDGLVPDDVSHCHLIEALGRAGQAEEALRVFEKMVQEGYGPTTMAY 319
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
L+ F G L +K M + C P+ Y ++ AL+ + A + ++M A
Sbjct: 320 NALVFNFISVGDLDRSIKYYKDMVDNNCPPNSDTYCKMIRALLKTRRVADALQMFDDMLA 379
Query: 378 KGL 380
+G+
Sbjct: 380 QGV 382
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/318 (19%), Positives = 128/318 (40%), Gaps = 53/318 (16%)
Query: 16 EFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM-- 73
+F +E CH + ++++I+ L + ++ +L+ + P + ++
Sbjct: 199 QFGIGIEKTCH---RKEAFSALIECLCRRSHVGVASSLVQAARGQPFHLDKQVYNDVLGG 255
Query: 74 FKRYVTAHLVNEAMGTFNKLDEF-------GL-KDEVSYCNLVDALCEYKHVIEAQEL-- 123
+ R+ G +KL F GL D+VS+C+L++AL EA +
Sbjct: 256 WARF----------GRVDKLQHFWAMMLEDGLVPDDVSHCHLIEALGRAGQAEEALRVFE 305
Query: 124 -----CFGENK-----------NVG--------FSGLVEMN---KTKIYNMILRGWFKMS 156
+G +VG + +V+ N + Y ++R K
Sbjct: 306 KMVQEGYGPTTMAYNALVFNFISVGDLDRSIKYYKDMVDNNCPPNSDTYCKMIRALLKTR 365
Query: 157 WWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
+ +++M +GV+ D + +++ +C G P A+ +Y++ +K G + + Y
Sbjct: 366 RVADALQMFDDMLAQGVLPDTGIITSFIEPLCTFGPPHAALMIYQKSRKAGCTISLKTYK 425
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
++ + + ++ EM+E G ++ LC G+V A V+ E +K
Sbjct: 426 LLLERLARFGKSGTVLNIWEEMQESGYPSDKEIYEFIVNGLCNVGKVDAAVFVVEESLRK 485
Query: 277 G-CVPDVITYHCFFRCLE 293
G C+ V+ R LE
Sbjct: 486 GFCLGRVVYSKLNDRLLE 503
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 179/395 (45%), Gaps = 58/395 (14%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY V++ L K L+ +L +M++ + + I+ ++A+ FN+
Sbjct: 241 TYGPVLNRLCKSGNSALALDLFRKMEERNIK-ASVVQYSIVIDSLCKDGSFDDALSLFNE 299
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC---FGEN---KNVGFSGLVEMNKTKIY 145
++ G+K D V+Y +L+ LC + ++ G N V FS L+++
Sbjct: 300 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDV------ 353
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
+ K + +E + EM RG+ D +Y+ +D CK +A +++ M
Sbjct: 354 ------FVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 407
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
KG + D+V Y+ +I + ++ VD MR++RE+ G P+ +T NT++ C++G++
Sbjct: 408 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 467
Query: 266 AYAVLAEMPKKGCVPDVITYHCF----------------FRCLEKPREILG--------- 300
A + EM +G P V+TY F ++K R LG
Sbjct: 468 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 527
Query: 301 -------------LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
LF + + G++P + TY +++ + G L ++++KM+E GC+P
Sbjct: 528 GMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP 587
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
D+F YN L+ A + L + + EEM G SA
Sbjct: 588 DDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSA 622
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 142/311 (45%), Gaps = 16/311 (5%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
P+ T+ + R + A+ F K++E +K V Y ++D+LC+ +A L
Sbjct: 237 PDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSL 296
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F E + G V Y+ ++ G W + EM R ++ D+ ++S
Sbjct: 297 -FNEMEMKGIKADV-----VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 350
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D+ K GK +A +LY EM +GI D + YN++I + A +++ M GC
Sbjct: 351 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 410
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCLEKPRE 297
+P +VT + +I C+ RV + + E+ KG +P+ ITY+ C L +E
Sbjct: 411 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 470
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
LF M+ G+ P + TY +LL G L +++KM++ + YN ++
Sbjct: 471 ---LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 527
Query: 358 ALIDKGMLDMA 368
+ + +D A
Sbjct: 528 GMCNASKVDDA 538
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 133/292 (45%), Gaps = 25/292 (8%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK--------TKIYNMILRG 151
D +++ LV+ C V EA L +VEM + T I + L+G
Sbjct: 168 DTITFSTLVNGFCLEGRVSEAVAL---------VDRMVEMKQRPDLVTVSTLINGLCLKG 218
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + M + G D +Y ++ +CKSG A+ L+++M+++ IK
Sbjct: 219 RVSEALV-----LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKAS 273
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
VV Y+ VI ++ D A+ ++ EM G + VVT +++I LC +G+ + +L
Sbjct: 274 VVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 333
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM + +PDV+T+ K ++L L++ MI GI P TY L+ F +
Sbjct: 334 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 393
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
L ++ M GC PD Y+ L+++ +D + E+ +KGL
Sbjct: 394 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 445
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 138/323 (42%), Gaps = 11/323 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELC 124
P + + M +R + +N F ++ E G + Y ++ +A YK + +
Sbjct: 22 PTIHSLKKMIQRLIP---LNRKASNFTQILEKG-TSLLHYSSITEAKLSYKERLRNGIVD 77
Query: 125 FGENKNVG-FSGLVEMNK--TKI-YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
N + F +++ T I +N + + + F + M+ G+ D+++
Sbjct: 78 IKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTM 137
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+I ++ C+ K A + K G + D + ++T++ + V A+ + M E
Sbjct: 138 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 197
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE--- 297
M +P +VT +T+I LC GRV EA ++ M + G PD +TY L K
Sbjct: 198 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 257
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
L LF +M E I+ + Y +++ + G ++ +ME G D Y++L+
Sbjct: 258 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 317
Query: 358 ALIDKGMLDMARKYDEEMFAKGL 380
L + G D K EM + +
Sbjct: 318 GLCNDGKWDDGAKMLREMIGRNI 340
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 117/270 (43%), Gaps = 14/270 (5%)
Query: 31 TDTYNSVIDILGK---FFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAM 87
T TYNS+ID K E + ++L+ + P+ T+ I+ Y A V++ M
Sbjct: 379 TITYNSLIDGFCKENCLHEANQMFDLMV----SKGCEPDIVTYSILINSYCKAKRVDDGM 434
Query: 88 GTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYN 146
F ++ GL + ++Y LV C+ + A+EL F E + G V Y
Sbjct: 435 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL-FQEMVSRGVPPSV-----VTYG 488
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++L G K E +E+M K + + Y+I + MC + K A L+ + K
Sbjct: 489 ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 548
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
G+K DVV YN +I + + A ++R+M+E GC P T N +I+ + +
Sbjct: 549 GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS 608
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCLEKPR 296
++ EM G D T L R
Sbjct: 609 VELIEEMKVCGFSADSSTIKMVIDMLSDRR 638
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 3/185 (1%)
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
K M+ GI+ D+ +I + + FA V ++G +P +T +T++ C
Sbjct: 123 KGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLE 182
Query: 261 GRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTY 317
GRV EA A++ M + PD++T CL+ + E L L DRM+E G +P TY
Sbjct: 183 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 242
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
+L + + G +++KMEE Y+ ++D+L G D A EM
Sbjct: 243 GPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEM 302
Query: 378 KGLSA 382
KG+ A
Sbjct: 303 KGIKA 307
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 189/428 (44%), Gaps = 85/428 (19%)
Query: 31 TDTYNSVIDILGKFFEFDLSWN--LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
T T+N++I G F E +S L+ RM +N P+ T+ + + + A+
Sbjct: 148 TTTFNTLIK--GLFLEGKVSEAVVLVDRMVENGCQ-PDVVTYNSIVNGICRSGDTSLALD 204
Query: 89 TFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
K++E +K +V +Y ++D+LC I+A F E + G V YN
Sbjct: 205 LLRKMEERNVKADVFTYSTIIDSLCR-DGCIDAAISLFKEMETKGIKSSV-----VTYNS 258
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++RG K W ++M R +V ++ ++++ +D+ K GK +A +LYKEM +G
Sbjct: 259 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 318
Query: 208 IKMDVVAYNT-----------------------------------VIRAVGVSEGVDFAM 232
I +++ YNT +I+ + + VD M
Sbjct: 319 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 378
Query: 233 RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---- 288
+V+R + + G + VT + +++ C++G+++ A + EM G +PDV+TY
Sbjct: 379 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 438
Query: 289 ------------FRCLEKPREILG--LFDRMIES--------------------GIRPKM 314
F L+K + LG ++ +IE G++P +
Sbjct: 439 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 498
Query: 315 DTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
TY +++ + G L ++ +KMEE G +P++ YN L+ A + G L + K EE
Sbjct: 499 MTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 558
Query: 375 MFAKGLSA 382
M + G SA
Sbjct: 559 MKSCGFSA 566
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 176/379 (46%), Gaps = 18/379 (4%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A+ F +ET + TYNS++ L K +++ L+ M +PN TF ++
Sbjct: 237 AISLFKEMETK-GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-EIVPNVITFNVL 294
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVG 132
+V + EA + ++ G+ + +Y L+D C + EA + +N
Sbjct: 295 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 354
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
+V + +++G+ + + + + KRG+V + +YSI + C+SGK
Sbjct: 355 SPDIV------TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 408
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
A +L++EM G+ DV+ Y ++ + + ++ A+ ++ ++++ +V T
Sbjct: 409 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 468
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESG 309
+I+ +C+ G+V +A+ + +P KG P+V+TY L K E L +M E G
Sbjct: 469 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 528
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
P TY L+R R G L + ++M+ G S D + ++D L+ M +
Sbjct: 529 NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL-SAMKRLTL 587
Query: 370 KYDEEMFAKGLSAKPREEL 388
+Y +KG +K R++L
Sbjct: 588 RY---CLSKG--SKSRQDL 601
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 132/276 (47%), Gaps = 19/276 (6%)
Query: 109 DALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM 168
DA+ ++ +I ++ L + + FS + +TK +N++L +F +++
Sbjct: 61 DAIALFQEMIRSRPLPSLVDFSRFFSAIA---RTKQFNLVL-------------DFCKQL 104
Query: 169 DKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV 228
+ G+ ++++ +I ++ C+ K A + ++ K G + D +NT+I+ + + V
Sbjct: 105 ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKV 164
Query: 229 DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
A+ + M E GCQP VVT N+++ +C +G A +L +M ++ DV TY
Sbjct: 165 SEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTI 224
Query: 289 FRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
L + I + LF M GI+ + TY L+R + G ++ K M
Sbjct: 225 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 284
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
P+ +N L+D + +G L A + +EM +G+S
Sbjct: 285 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 320
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 166/374 (44%), Gaps = 44/374 (11%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + AL ++ + F T TY+++ID L + E D L+ M + P
Sbjct: 76 CKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCA-P 134
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCF 125
N T+ LVN +G + F L ++++ L + +I+ LC
Sbjct: 135 NAVTYNT---------LVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG--LCK 183
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
F + EM M + G+ D+ +++ +D
Sbjct: 184 EGEIEAAFRVVDEMF---------------------------MIESGLSPDVITFNSVLD 216
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
+CK + A ++K ++G + +VV Y+T+I + +D A+++ +M E+GC+
Sbjct: 217 GLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRA 276
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC----FFRCLEKPREILGL 301
+ VT +TV+ L + GR+ +A VL +M GC+PD +TY+ FF+ ++ RE +GL
Sbjct: 277 NTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFK-RQRLREAVGL 335
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
M+E+G P + TY L R G + M GC+P+ Y+++VD L
Sbjct: 336 LREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCK 395
Query: 362 KGMLDMARKYDEEM 375
G + A Y E+M
Sbjct: 396 AGRVTEALGYFEKM 409
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 170/393 (43%), Gaps = 53/393 (13%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++++ L +++L+ +M N P TF ++ K + A ++
Sbjct: 138 TYNTLVNALLGQGRSKEAFSLLEQMAANGCP-PELITFGLIIKGLCKEGEIEAAFRVVDE 196
Query: 93 L--DEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI--YNM 147
+ E GL D +++ +++D LC+ + +++A NV L + + Y+
Sbjct: 197 MFMIESGLSPDVITFNSVLDGLCKEQRILDAH--------NVFKRALERGCRPNVVTYST 248
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++ G KM+ + + +M + G + +YS +D + K G+ AV + ++M+ G
Sbjct: 249 LIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAG 308
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
D V YNT+I + + A+ + REM E G PSVVT T+ LC +GR EA
Sbjct: 309 CLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAV 368
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLF---------------------- 302
+L M +GC P+ ITY L K E LG F
Sbjct: 369 EILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDG 428
Query: 303 --------------DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
+RMI +G P + T+ +L+ G + +++ M E GC PD
Sbjct: 429 LCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPD 488
Query: 349 EFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
Y LVD L +D A ++M + GLS
Sbjct: 489 MVTYATLVDRLCRASRVDEAFDLFQQMRSDGLS 521
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 140/293 (47%), Gaps = 13/293 (4%)
Query: 83 VNEAMGTFNKL-DEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
V++A+ F ++ D+ D V+Y L+D L + + V EA +L F E + G V
Sbjct: 11 VDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDL-FEEARAKGCHPTV---- 65
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKR-GVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
YN ++ G K +++M G + +YS +D +C+ + K KL
Sbjct: 66 -VTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLL 124
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
+EM +G + V YNT++ A+ A + +M GC P ++T +IK LC+
Sbjct: 125 EEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKE 184
Query: 261 GRVREAYAVLAE--MPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMD 315
G + A+ V+ E M + G PDVIT++ L K + IL +F R +E G RP +
Sbjct: 185 GEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVV 244
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
TY L+ + + + KM ELGC + Y+ +VD L+ G ++ A
Sbjct: 245 TYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDA 297
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 18/285 (6%)
Query: 107 LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCRE 163
++D LC+ + V +A L F +V+ Y ++ G K + +
Sbjct: 1 MIDGLCKSRKVDKAITL---------FKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYD 51
Query: 164 FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK-GIKMDVVAYNTVIRAV 222
+EE +G + +Y+ +D +CK G+ A+ LY +M G + VV Y+T+I +
Sbjct: 52 LFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGL 111
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
VD ++ EM GC P+ VT NT++ L GR +EA+++L +M GC P++
Sbjct: 112 CRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPEL 171
Query: 283 ITYHCFFRCLEKPREILGLFDR-----MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVW 337
IT+ + L K EI F MIESG+ P + T+ +L + + V+
Sbjct: 172 ITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVF 231
Query: 338 KKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
K+ E GC P+ Y+ L+D L +D A + +M G A
Sbjct: 232 KRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRA 276
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 158/347 (45%), Gaps = 12/347 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+NSV+D L K + N+ R + PN T+ + ++EA+ K
Sbjct: 210 TFNSVLDGLCKEQRILDAHNVFKRALERGCR-PNVVTYSTLIDGLSKMAKMDEALQLLAK 268
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G + + V+Y +VD L + +E + + ++ G + YN ++ G
Sbjct: 269 MVELGCRANTVTYSTVVDGLLKVGR-MEDAVVVLRQMRDAGC-----LPDAVTYNTLIDG 322
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+FK + EM + G + +Y+ +C+SG+ +AV++ M +G +
Sbjct: 323 FFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPN 382
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREM-REMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
+ Y++++ + + V A+ + +M R+ P V+ + +I LC+ G++ EAY L
Sbjct: 383 AITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFL 442
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
M + G +PDV+T+ L I L LF M E G P M TY L+ + R
Sbjct: 443 ERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRA 502
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
+ F ++++M G SPD ++ L++ + A++ +E
Sbjct: 503 SRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 126/271 (46%), Gaps = 12/271 (4%)
Query: 14 ALEFF-NWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
AL+ VE C T TY++V+D L K + + ++ +M+D +P+ T+
Sbjct: 262 ALQLLAKMVELGCR--ANTVTYSTVVDGLLKVGRMEDAVVVLRQMRD-AGCLPDAVTYNT 318
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNV 131
+ + + EA+G ++ E G V +Y L LC EA E+ +
Sbjct: 319 LIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEIL----DYM 374
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD-LHSYSIYMDIMCKS 190
G T Y+ I+ G K + ++E+M + VV + +YS +D +CK+
Sbjct: 375 AARGCAPNAIT--YSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKA 432
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTC 250
GK +A + + M + G DVV ++ +I + + +D + ++R M E GC P +VT
Sbjct: 433 GKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTY 492
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
T++ LC RV EA+ + +M G PD
Sbjct: 493 ATLVDRLCRASRVDEAFDLFQQMRSDGLSPD 523
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 179/392 (45%), Gaps = 17/392 (4%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
+ ++ + F+ +E C H +YN VI+ L + F ++ +++ +M P+
Sbjct: 82 SKNYDLVISLFHHMEV-CGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYE-PDV 139
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFG 126
T + + + V +A+ +K++E G + D V Y ++D C+ V +A EL F
Sbjct: 140 VTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVEL-FD 198
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
+ G YN ++ G W +M R +V ++ +++ +D+
Sbjct: 199 RMERDGVRA-----DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 253
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
K GK +A+KLY+EM ++ + DV YN++I + + VD A ++ M GC P
Sbjct: 254 FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD 313
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC---LEKPREILGLFD 303
VVT NT+I C++ RV E + EM ++G V D ITY+ + +P +F
Sbjct: 314 VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS 373
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
RM RP + TY +LL + V+++ M++ D YN ++ + G
Sbjct: 374 RMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIG 430
Query: 364 MLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
++ A + KGL KP T ++ G
Sbjct: 431 NVEDAWDLFRSLSCKGL--KPDVVSYTTMISG 460
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 117/249 (46%), Gaps = 11/249 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+ +VID+ K +F + L M P+ T+ + V+EA +
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD-PDVFTYNSLINGLCMHGRVDEAKQMLDL 304
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G L D V+Y L++ C+ K V E +L F E G G T YN I++G
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKL-FREMAQRGLVG-----DTITYNTIIQG 358
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+F+ +E + MD R ++ +YSI + +C + + KA+ L++ M+K I++D
Sbjct: 359 YFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 415
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ YN VI + V+ A ++R + G +P VV+ T+I C + ++ +
Sbjct: 416 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYR 475
Query: 272 EMPKKGCVP 280
+M + G +P
Sbjct: 476 KMQEDGLLP 484
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 105/238 (44%), Gaps = 38/238 (15%)
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
+S + + KS + L+ M+ GI D+ +YN VI + A+ V +M
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 131
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF--RC-LEKPR 296
+ G +P VVT +++I C+ RV +A ++++M + G PDV+ Y+ C +
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 191
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKF---GRWG----FLR------------------ 331
+ + LFDRM G+R TY L+ GRW +R
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 332 PVFV----------VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
VFV ++++M PD F YN+L++ L G +D A++ + M KG
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 79/187 (42%), Gaps = 3/187 (1%)
Query: 197 VKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKL 256
+ L+ +M + +V ++ V+ + S+ D + ++ M G + + N VI
Sbjct: 54 IDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINC 113
Query: 257 LCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPK 313
LC R A +V+ +M K G PDV+T + + + L +M E G RP
Sbjct: 114 LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPD 173
Query: 314 MDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDE 373
+ Y ++ + G + ++ +ME G D YN+LV L G A +
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR 233
Query: 374 EMFAKGL 380
+M + +
Sbjct: 234 DMVMRDI 240
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 151/313 (48%), Gaps = 16/313 (5%)
Query: 90 FNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
F+++ E G + D +SY ++ ++C+ A ++ K G +Y+ +
Sbjct: 162 FHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPC----NVVVYSTV 217
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G FK G+ + + EM ++GV ++ +Y+ + +CK+ KA + ++M G+
Sbjct: 218 VHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGV 277
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ D V YNT+I A+R+++EM G P+ VTC+T + LC++GR+ EA
Sbjct: 278 QPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEARE 337
Query: 269 VLAEMPKKGCVPDVITYHCFFR------CLEKPREILGLFDRMIESGIRPKMDTYVMLLR 322
M KG ++I+Y CL ++ LF+ M+ GI P + +L+
Sbjct: 338 FFDSMLAKGHKLNIISYSTLLHGYATAGCLV---DMSNLFNLMVRDGIVPNQHVFNILVN 394
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ + G +R +++ M++ G +PD Y A++ A G +D A M KG+
Sbjct: 395 GYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGV-- 452
Query: 383 KPREELGTKLVQG 395
+P + L+QG
Sbjct: 453 EPNFAVYQCLIQG 465
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 161/354 (45%), Gaps = 15/354 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNSVI L K D + ++ +M N P++ T+ + Y T +A+ F +
Sbjct: 248 TYNSVIHALCKARAVDKAQGILRQMVGNGVQ-PDNVTYNTLIHGYSTLGQWKQAVRMFKE 306
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI--YNMIL 149
+ G + + V+ V LC++ + EA+E F S L + +K I Y+ +L
Sbjct: 307 MTSRGVIPNTVTCSTFVAFLCKHGRIEEAREF-FD-------SMLAKGHKLNIISYSTLL 358
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G+ + M + G+V + H ++I ++ K G +A+ ++++M+K+G+
Sbjct: 359 HGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLN 418
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
DV+ Y VI A +D AM + M + G +P+ +I+ C +G + +A +
Sbjct: 419 PDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEEL 478
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGR 326
+ E+ KG P ++++ L K + +FD +I +G + ++ + L+ +
Sbjct: 479 VYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCL 538
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G + F V M +G PD Y LV+ G +D E+ KG+
Sbjct: 539 IGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGV 592
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 145/324 (44%), Gaps = 19/324 (5%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+PN F I+ Y +V EAM F + + GL D ++Y ++ A C + +A +
Sbjct: 383 VPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMD 442
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
F + G VE N +Y +++G+ K E E+ +G+ + S++
Sbjct: 443 K-FNHMIDKG----VEPN-FAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFAS 496
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ +CK G+ ++A +++ + + G K DV + ++I + + A RV+ M +G
Sbjct: 497 LINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVG 556
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG-- 300
+P +VT T++ C+NGR+ + + E+ KG P TY L
Sbjct: 557 IEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAK 616
Query: 301 -LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+F MIESGI + TY +LL R V++K+ + D N ++ +
Sbjct: 617 EMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKM 676
Query: 360 IDKGMLDMARKYDEEMFAKGLSAK 383
AR+ +E A+GL A
Sbjct: 677 FK------ARRREE---AEGLFAS 691
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 117/250 (46%), Gaps = 41/250 (16%)
Query: 171 RGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF 230
R + +++YSI +D C++ + A + + ++G+K DV+ ++++R + ++ D
Sbjct: 97 RVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDE 156
Query: 231 AMRV-YREMREMGCQPSVVTCNTVIKLLCENGR--------------------------- 262
A+ V + M E+GC P ++ +TV+K +C++GR
Sbjct: 157 AVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYST 216
Query: 263 ----------VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESG 309
V EA + EM ++G P+V+TY+ L K R + G+ +M+ +G
Sbjct: 217 VVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNG 276
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
++P TY L+ + G + ++K+M G P+ + V L G ++ AR
Sbjct: 277 VQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAR 336
Query: 370 KYDEEMFAKG 379
++ + M AKG
Sbjct: 337 EFFDSMLAKG 346
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 149/343 (43%), Gaps = 11/343 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +VI + D + + + M D PN A ++ + + + T + +A +
Sbjct: 423 TYLAVIHAFCRMGSMDDAMDKFNHMIDKGVE-PNFAVYQCLIQGFCTHGDLVKAEELVYE 481
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ GL + S+ +L++ LC+ V EAQ + F G E I+ ++ G
Sbjct: 482 IRNKGLGPCILSFASLINHLCKEGRVFEAQRI-FDMIIRTG-----EKADVNIFTSLIDG 535
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + + + M G+ D+ +Y ++ CK+G+ + L++E+ KG+K
Sbjct: 536 YCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPT 595
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
Y ++ + + A +++EM E G ++ T + ++ LC N EA V
Sbjct: 596 TFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQ 655
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
++ D++ + + K R E GLF + + G+ P + TY +++ + G
Sbjct: 656 KLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEG 715
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
+ V+ M + G SP N +V L++KG + A Y
Sbjct: 716 SVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIY 758
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 151/328 (46%), Gaps = 16/328 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQ-- 121
PNH F I+ Y V++AM F+K+ + GL D V+Y ++ LC+ V +A
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431
Query: 122 -ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
E E + G +YN ++ W K +E EM RG+ D +
Sbjct: 432 FEQMIDERLSPG---------NIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFF 482
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ +D CK G+ ++ KL+ M + G+K D++ Y+T+I ++ +D A ++ M
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG 300
+G +P VT NT+I C+ R+ +A + EM G PD+ITY+ + L + R
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602
Query: 301 ---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
L+ + ESG + ++ TY ++L + +++ + + +N ++
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPR 385
AL+ G D A+ + A GL R
Sbjct: 663 ALLKVGRNDEAKDLFAALSANGLVPDVR 690
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 155/353 (43%), Gaps = 36/353 (10%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PN T+ I+ A ++ + + G + D +++ L+ LC K +A ++
Sbjct: 89 PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148
Query: 124 CFGENKNVG-----------FSGLVEMNKTK---------------------IYNMILRG 151
+G GL + N+++ Y ++ G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+FK K + EM RG++ ++ +YS + +CK+ KA+++ M K G+ +
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
YN+++ S A+ ++M G +P VVT N+++ LC+NGR EA +
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M K+G P++ TY + E+ GL D M+ +GI P + +L+ + + G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ +V+ KM + G +PD Y ++ L G ++ A +Y E+M + LS
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLS 441
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 172/407 (42%), Gaps = 81/407 (19%)
Query: 50 SWNLIHRMKDNPSSIP-NHATFRIMFKRYVTAHLVNEAMGTFNK-LDEFGLKDEVSYCNL 107
+ L+ M D+ P + ++ + + +++A GT+++ LD L + V+Y ++
Sbjct: 181 ALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSI 240
Query: 108 VDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEE 167
+ ALC+ + + +A E+ KN G+ M + YN I+ G+ + F ++
Sbjct: 241 IAALCKAQAMDKAMEVLTSMVKN----GV--MPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG---- 223
M GV D+ +Y+ MD +CK+G+ +A K++ M K+G+K ++ Y T+++
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 224 -----------VSEG--------------------VDFAMRVYREMREMGCQPSVVTCNT 252
V G VD AM V+ +MR+ G P VT T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCLEKPREIL------- 299
VI +LC++GRV +A +M + P I Y+ C F +K +E++
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 300 -------------------------GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
LFD M+ G++P + TY L+ + G +
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534
Query: 335 VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ M +G PD YN L++ ++ A EM + G+S
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVS 581
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 25/223 (11%)
Query: 173 VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM 232
V +L +Y I + C +G+ + KKG ++D +A+ +++ + + AM
Sbjct: 87 VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146
Query: 233 R-VYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG--CVPDVITYHCFF 289
V R M ++GC P+V + N ++K LC+ R +EA +L MP G C PDV++Y
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206
Query: 290 RCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
K ++ G + M++ GI P + TY ++ + + V M + G
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266
Query: 347 PDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELG 389
P+ YN++V G +P+E +G
Sbjct: 267 PNCRTYNSIVHGYCSSG-------------------QPKEAIG 290
>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 732
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 156/359 (43%), Gaps = 23/359 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+ VI K+ +++ + L+ M++N P+ T+ EA+G +
Sbjct: 328 TYSIVIGACAKWGQWEEAVALLREMQEN-GVAPDVITYSSTISACAKKGQWEEAVGLLRE 386
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI------Y 145
+ G+ + +SY ++ A + EA +L L EM + Y
Sbjct: 387 MPMEGVTPNAISYGIVISACAKRGRWREAIDL------------LQEMQAHGVPPDVINY 434
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
+ + + S W + EM G+ ++ SY+ +D K+G+ AV+L +EM
Sbjct: 435 SAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPA 494
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G+ DV+ Y+ VI + + + A+ ++REM+ G P VV+CNT I + G E
Sbjct: 495 HGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEE 554
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLR 322
A VL EMP G VPD I+Y K +EI+ L M G+ P +Y +
Sbjct: 555 ALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMS 614
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G + V+ + M +G SPD YN+ ++A G A +M GL+
Sbjct: 615 ACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLA 673
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 156/370 (42%), Gaps = 16/370 (4%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
DW++AL+ + ++ + Y+S I G +++ + L+ M + P+
Sbjct: 165 GDWRKALDVLDRMQEQ-GVKPDSQNYSSAIAACGNARQWERAVELLASMAAR-GTPPDVL 222
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGEN 128
T+ EA+G + G+K V + + C E E
Sbjct: 223 TYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEM 282
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
VG + V Y+ ++ K W EM +GVV ++ +YSI +
Sbjct: 283 PAVGLAPDV-----ITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACA 337
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
K G+ +AV L +EM++ G+ DV+ Y++ I A + A+ + REM G P+ +
Sbjct: 338 KWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAI 397
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF-RCLEKPR--EILGLFDRM 305
+ VI + GR REA +L EM G PDVI Y C + R + L L M
Sbjct: 398 SYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREM 457
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
+G+ P + +Y + + G + + ++M G +PD Y+A++ +
Sbjct: 458 PATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCA----- 512
Query: 366 DMARKYDEEM 375
M R+++E +
Sbjct: 513 -MGRQWEEAL 521
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 5/228 (2%)
Query: 158 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPW-KAVKLYKEMKKKGIKMDVVAYN 216
W K + + M ++GV D +YS + C + + W +AV+L M +G DV+ Y+
Sbjct: 167 WRKALDVLDRMQEQGVKPDSQNYSSAI-AACGNARQWERAVELLASMAARGTPPDVLTYS 225
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
+ I A A+ + R M+ G +P+V+ + I + G+ A +L EMP
Sbjct: 226 SAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAV 285
Query: 277 GCVPDVITYHCFFRCLEKPREILGLFDRMIE---SGIRPKMDTYVMLLRKFGRWGFLRPV 333
G PDVITY K + F ++E G+ + TY +++ +WG
Sbjct: 286 GLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEA 345
Query: 334 FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ ++M+E G +PD Y++ + A KG + A EM +G++
Sbjct: 346 VALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVT 393
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 106/283 (37%), Gaps = 44/283 (15%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A+ W++AL + T +YNS ID K ++ L+ M + P+
Sbjct: 444 ASRWEQALWLLREMPA-TGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAH-GLAPDV 501
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGE 127
T+ + EA+ F ++ G+ +V CN C
Sbjct: 502 ITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACA-------------- 547
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
+ WW + + EM G+V D SY +D
Sbjct: 548 --------------------------QGGWWEEALDVLGEMPTMGLVPDAISYRTAID-A 580
Query: 188 CKSGKPWKAV-KLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
C G WK + L +EM G+ D ++Y + A V A+ + R+M +G P
Sbjct: 581 CAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPD 640
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF 289
VVT N+ I + GR +EA +L +MP G PDV +++
Sbjct: 641 VVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAI 683
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE-AYAVLAEMPKKGCVPDVITYHCFF 289
A+ V M+E G +P ++ I C N R E A +LA M +G PDV+TY
Sbjct: 170 ALDVLDRMQEQGVKPDSQNYSSAIAA-CGNARQWERAVELLASMAARGTPPDVLTYSSAI 228
Query: 290 RCLEKP---REILGLFDRMIESGIRPKMDTY---VMLLRKFGRWGFLRPVFVVWKKMEEL 343
K +E +GL M G++P + Y + RK G+W + K+M +
Sbjct: 229 AACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQW---ETAVDLLKEMPAV 285
Query: 344 GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
G +PD Y+ ++DA +G + A + EM KG+ A
Sbjct: 286 GLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVA 324
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 181/387 (46%), Gaps = 15/387 (3%)
Query: 13 RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
+AL FFN + D + +NS++ L + F+ +W + +K+ + +F I
Sbjct: 111 KALIFFNEM-VDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELKERVKF--DVYSFGI 167
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNV 131
M K ++++ L + GL V Y L+D C+ IE L F + +
Sbjct: 168 MIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGD-IERARLFFDK---M 223
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
G GLV T + +++ G FK + +E+M G+ +L++Y+ M+ C G
Sbjct: 224 GEMGLVANQYT--FTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEG 281
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
K +A L+ EM+++G++ +VV YNT+I + E V A ++ +M++ P+++T N
Sbjct: 282 KICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYN 341
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFD---RMIES 308
T+I C+ G + +A ++L ++ G P ++TY+ K G+ D M
Sbjct: 342 TLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGR 401
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
GI P T +L+ + R + F ++ ME+ G PD + Y L+ L KG + +
Sbjct: 402 GISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKES 461
Query: 369 RKYDEEMFAKGLSAKPREELGTKLVQG 395
K M + +P + + ++ G
Sbjct: 462 SKLFRSM--GEMHVEPSDVIYNTMIHG 486
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 148/348 (42%), Gaps = 35/348 (10%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C D +RA FF+ + + T+ +I+ L K ++L +MK N P
Sbjct: 208 CKNGDIERARLFFDKM-GEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKIN-GLFP 265
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N T+ + Y + A F+++ E G++ + V+Y L+ +C + V EA++L
Sbjct: 266 NLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLV 325
Query: 125 FGENKNV-------------GFSGLVEMNKTK----------------IYNMILRGWFKM 155
K GF + ++K YN+++ G+ K
Sbjct: 326 DQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKA 385
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
W + EM+ RG+ + ++ +D + + KA ++Y M+K G+ DV Y
Sbjct: 386 GNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVY 445
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
+I + + + + +++R M EM +PS V NT+I C+ A +L EM
Sbjct: 446 GVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEA 505
Query: 276 KGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVML 320
KG VP+V +Y L K E L D+MIE ++P M+
Sbjct: 506 KGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMI 553
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 102/225 (45%), Gaps = 15/225 (6%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + +A + ++++ + + TYN +I+ K + +L M+ S P
Sbjct: 348 CDVGNLDKASSLLDQLKSN-GLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGIS-P 405
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELC 124
+ T ++ YV + +A ++ +++FGL +V Y L+ LC ++ E+ +L
Sbjct: 406 SKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKL- 464
Query: 125 FGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
F + EM+ IYN ++ G+ K + EM+ +G+V ++ SYS
Sbjct: 465 --------FRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYS 516
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
+ ++CK GK +A L +M + +K N + +A +E
Sbjct: 517 SIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMISKAKNFTE 561
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 185/412 (44%), Gaps = 38/412 (9%)
Query: 4 LSCYANDWK--RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
L+C K AL F ++ D + TYN +ID+L + ++ ++ M ++
Sbjct: 361 LTCLGKKRKVDEALSLFEVMKKDAE--PNSSTYNIIIDMLCLGGRVEEAYRILDEM-EHA 417
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA 120
S PN T IM R A + EA F + G D V+YC+L+D L + V EA
Sbjct: 418 SLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEA 477
Query: 121 QELC-----FGENKN-VGFSGLV--------EMNKTKIYN-MILRGW------------- 152
L G N N V ++ L+ + + KI+ +I RG
Sbjct: 478 YRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDC 537
Query: 153 -FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
FK K R +E++ G + D+ SYSI + + K+G+ + ++ MK++G +D
Sbjct: 538 VFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALD 597
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
AYN V+ S V A + EM+E QP+V T ++ L + R+ EAY +
Sbjct: 598 ARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFE 657
Query: 272 EMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
E KG +V+ Y F + + E + + M++ G+ P + T+ LL +
Sbjct: 658 EAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAE 717
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ V ++ M+E+ C P+ + Y+ L++ L + A + ++M +GL
Sbjct: 718 EINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGL 769
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 162/352 (46%), Gaps = 13/352 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY S+ID LGK + D ++ L +M D + N + + + + + F +
Sbjct: 460 TYCSLIDGLGKKGQVDEAYRLFEKMLDAGHN-ANPVVYTSLIRNFFIHGRKEDGHKIFKE 518
Query: 93 LDEFGLKDEVSYCNL-VDALCEYKH-VIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
L G K +++ N +D C +K +E + F + ++ GF + + Y++++
Sbjct: 519 LIRRGCKPDLTLLNTYMD--CVFKAGEVEKGRMIFEDIRSYGF-----LPDVRSYSILIH 571
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
G K + + M ++G D +Y+ +D CKSGK KA ++ +EMK+K ++
Sbjct: 572 GLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQP 631
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
V Y ++ + + +D A ++ E + G + +VV +++I + GR+ EAY +L
Sbjct: 632 TVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLIL 691
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
EM KKG P+V T++ L K EI L F M E P TY +L+ R
Sbjct: 692 EEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRV 751
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
FV W+ M++ G P+ Y ++ L G + A E A G
Sbjct: 752 QKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANG 803
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 174/403 (43%), Gaps = 52/403 (12%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMK------DNPS----- 62
AL + V+ C YN ID GK D++W H +K D+ S
Sbjct: 233 ALALVDEVKGSC-LEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMI 291
Query: 63 -----------------------SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-L 98
S+P + M Y +A +A +L E G +
Sbjct: 292 WVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCI 351
Query: 99 KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWW 158
VS+ +++ L + + V EA L K+ E N + YN+I+ +
Sbjct: 352 PSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA------EPNSST-YNIIID---MLCLG 401
Query: 159 GKCREFW---EEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
G+ E + +EM+ + +L + +I +D +CK+ K +A K+++ ++G D V Y
Sbjct: 402 GRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTY 461
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
++I +G VD A R++ +M + G + V ++I+ +GR + + + E+ +
Sbjct: 462 CSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIR 521
Query: 276 KGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
+GC PD+ + + C+ K E+ +F+ + G P + +Y +L+ + G R
Sbjct: 522 RGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARE 581
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
++ M++ G + D AYNA+VD G + A + EEM
Sbjct: 582 TSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEM 624
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 158/340 (46%), Gaps = 15/340 (4%)
Query: 49 LSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNL 107
L+ ++ R+K P+ + + ++ A A+ ++ E G + V + L
Sbjct: 165 LAVAVMRRLKFRPA----FSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTL 220
Query: 108 VDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEE 167
V AL V +A L E K + + I G M+W +F+ E
Sbjct: 221 VRALAREGQVADALAL-VDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW-----KFFHE 274
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
+ +G+ D SY+ + ++CK+G+ +A +L+ +M+ + AYNT+I G +
Sbjct: 275 LKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGR 334
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
+ A ++ +RE GC PSVV+ N+++ L + +V EA + L E+ KK P+ TY+
Sbjct: 335 FEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALS-LFEVMKKDAEPNSSTYNI 393
Query: 288 FFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
L + E + D M + + P + T +++ + + L + +++ + G
Sbjct: 394 IIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRG 453
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
C+PD Y +L+D L KG +D A + E+M G +A P
Sbjct: 454 CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANP 493
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 150/324 (46%), Gaps = 11/324 (3%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F +Y+ +I L K + + N+ H MK ++ A + + + + V++A
Sbjct: 559 FLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARA-YNAVVDGFCKSGKVHKA 617
Query: 87 MGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
++ E ++ V +Y +VD L + + EA L F E K+ G +E+N +Y
Sbjct: 618 YEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYML-FEEAKSKG----IELNVV-LY 671
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
+ ++ G+ K+ + EEM K+G+ ++++++ +D + K+ + +A+ ++ MK+
Sbjct: 672 SSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKE 731
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+ Y+ +I + + + A +++M++ G P+VVT T+I L + G + +
Sbjct: 732 MKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITD 791
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLE---KPREILGLFDRMIESGIRPKMDTYVMLLR 322
AY++ G +PD +++ + + E +F+ G R + + + LL
Sbjct: 792 AYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLD 851
Query: 323 KFGRWGFLRPVFVVWKKMEELGCS 346
+ L +V + E+ S
Sbjct: 852 ALNKSECLEQAAIVGAVLREIAKS 875
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 83/187 (44%), Gaps = 3/187 (1%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
AV M++ + AY +I A+ + + A+ + R+M+E+G + V T+++
Sbjct: 163 AVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVR 222
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRP 312
L G+V +A A++ E+ PD++ Y+ C K + F + G++P
Sbjct: 223 ALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKP 282
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
+Y ++ + G L ++ +ME P +AYN ++ G + A K
Sbjct: 283 DDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLL 342
Query: 373 EEMFAKG 379
E + +G
Sbjct: 343 ERLRERG 349
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 177/393 (45%), Gaps = 28/393 (7%)
Query: 6 CYANDWKRALEFFNWV-ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C + AL+FF+ + ET C T+ ++++ L + + L+ RM ++
Sbjct: 160 CVEDRVSEALDFFHQMFETTCR--PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQ- 216
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG--LKDEVSYCNLVDALCEYKHVIEAQE 122
P T+ + A+ K++E + + V Y ++D+LC+ +AQ
Sbjct: 217 PTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQN 276
Query: 123 LCFGENKNVG-FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
L F E + G F L YN ++ G+ W + +EM +R + D+ +Y+
Sbjct: 277 L-FTEMQEKGIFPDLF------TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
++ K GK ++A +LY EM +GI + + YN++I + +D A ++ M
Sbjct: 330 ALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATK 389
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKP-REI 298
GC P V T T+I C R+ + +L EMP++G V + +TY+ CL
Sbjct: 390 GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAA 449
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL-----------GCSP 347
L L +MI SG+ P + T LL G L+ ++K M++ G P
Sbjct: 450 LDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEP 509
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
D YN L+ LI++G A + EEM +G+
Sbjct: 510 DVLTYNILICGLINEGKFLEAEELYEEMPHRGI 542
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 142/323 (43%), Gaps = 17/323 (5%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGE 127
+F I+ K + + + A+ TF K+ + GL D V++ L+ LC V EA +
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDF---- 171
Query: 128 NKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F + E + ++ G + + + M + G+ +Y +
Sbjct: 172 -----FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226
Query: 185 DIMCKSGKPWKAVKLYKEMKK-KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
D MCK G A+ L ++M++ I +VV Y+ +I ++ A ++ EM+E G
Sbjct: 227 DGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILG 300
P + T N++I C +GR +A +L EM ++ PDV+TY+ K E
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAE 346
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L+D M+ GI P TY ++ F + L ++ M GCSPD F + L+D
Sbjct: 347 LYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYC 406
Query: 361 DKGMLDMARKYDEEMFAKGLSAK 383
+D + EM +GL A
Sbjct: 407 GAKRIDDGMELLHEMPRRGLVAN 429
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 138/309 (44%), Gaps = 22/309 (7%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T TYNS+ID K D + ++ + M S P+ TF + Y A +++ M
Sbjct: 360 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCS-PDVFTFTTLIDGYCGAKRIDDGMELL 418
Query: 91 NKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+++ GL + V+Y L+ C + A +L ++ + SG+ T N +L
Sbjct: 419 HEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDL----SQQMISSGVCPDIVT--CNTLL 472
Query: 150 RGWFKMSWWGKCREFWEEMDK-----------RGVVKDLHSYSIYMDIMCKSGKPWKAVK 198
G E ++ M K GV D+ +Y+I + + GK +A +
Sbjct: 473 DGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEE 532
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
LY+EM +GI D + Y+++I + +D A +++ M P+VVT NT+I C
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYC 592
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMD 315
+ GRV + + EM ++G V D I Y FR + L +F MI SG+ P
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTI 652
Query: 316 TYVMLLRKF 324
T +L F
Sbjct: 653 TIRNMLTGF 661
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 45/260 (17%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+++M+++ + D++S++I + C K A+ + ++ K G+ DVV + T++ +
Sbjct: 100 SLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGL 159
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
V + V A+ + +M E C+P+VVT T++ LC GR+ EA A+L M + G P
Sbjct: 160 CVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219
Query: 283 ITYHC----------------FFRCLEKPREIL-----------------------GLFD 303
ITY R +E+ I+ LF
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT 279
Query: 304 RMIESGIRPKMDTYVMLLRKF---GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
M E GI P + TY ++ F GRW + ++M E SPD YNAL++A +
Sbjct: 280 EMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL---QEMLERKISPDVVTYNALINAFV 336
Query: 361 DKGMLDMARKYDEEMFAKGL 380
+G A + +EM +G+
Sbjct: 337 KEGKFFEAAELYDEMLPRGI 356
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 125/259 (48%), Gaps = 12/259 (4%)
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
GE+ GF G K+ + G+ ++ + + +M + + + + M
Sbjct: 36 GESCEAGFGG----ESLKLQS----GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMG 87
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
++ + +P + LY++M++K I+ D+ ++N +I+ + FA+ + ++ ++G P
Sbjct: 88 VVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHP 147
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLF 302
VVT T++ LC RV EA +M + C P+V+T+ C E + E + L
Sbjct: 148 DVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALL 207
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG-CSPDEFAYNALVDALID 361
DRM+E G++P TY ++ + G + +KMEE+ P+ Y+A++D+L
Sbjct: 208 DRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCK 267
Query: 362 KGMLDMARKYDEEMFAKGL 380
G A+ EM KG+
Sbjct: 268 DGRHSDAQNLFTEMQEKGI 286
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 115/284 (40%), Gaps = 46/284 (16%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+ ++ID D L+H M + N T+ + + +N A+ +
Sbjct: 397 TFTTLIDGYCGAKRIDDGMELLHEMPRR-GLVANTVTYNTLIHGFCLVGDLNAALDLSQQ 455
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNV-------GFSGLVEMNKTKI 144
+ G+ ++ CN L+D LC+ + +A E+ K+ F+G VE +
Sbjct: 456 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNG-VEPD-VLT 513
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK--------------- 189
YN+++ G + + E +EEM RG+V D +YS +D +CK
Sbjct: 514 YNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMG 573
Query: 190 --------------------SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVD 229
+G+ ++L+ EM ++GI D + Y T+I ++
Sbjct: 574 SKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNIN 633
Query: 230 FAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
A+ +++EM G P +T ++ + A A+L ++
Sbjct: 634 GALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 677
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 78/176 (44%), Gaps = 7/176 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ I+ + EA + ++ G+ D ++Y +++D LC+ + EA ++
Sbjct: 509 PDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 568
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + FS V +N ++ G+ K E + EM +RG+V D Y
Sbjct: 569 -FVSMGSKSFSPNV-----VTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITL 622
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
+ K G A+ +++EM G+ D + ++ E ++ A+ + +++
Sbjct: 623 IYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 166/377 (44%), Gaps = 27/377 (7%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + RA E + T TY SV+D L + + D + ++ MK P
Sbjct: 56 CKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVE-P 114
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
+ TF + + A V+EA+ + ++ + D VS L+ LC + + EA EL
Sbjct: 115 DKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYEL- 173
Query: 125 FGENKNVGFSGLVEMNK-------TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
F E +EM + Y ++ G+ K K + M+ R V ++
Sbjct: 174 FQE---------MEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNV 224
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
+YS + +CK+G +A+ L++ M KG +VV Y T+I + + VD A + E
Sbjct: 225 VTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDE 284
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--C---- 291
M C V+ N ++ C GR+ EA + EM K C+PD ITY C R C
Sbjct: 285 MTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASR 344
Query: 292 LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFA 351
LE+ R +L + +GI P + TY +++ + R ++M +P+
Sbjct: 345 LEEARFLLE--NMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVT 402
Query: 352 YNALVDALIDKGMLDMA 368
Y++L+D L G ++ A
Sbjct: 403 YSSLIDGLCKAGRVNHA 419
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 139/300 (46%), Gaps = 32/300 (10%)
Query: 95 EFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK-------IYNM 147
EF +E +Y +V+ LC+ + +A E+ L EM K Y+
Sbjct: 3 EFVAPNERTYNVVVNGLCKARLTSKAYEV------------LKEMRDGKSVAPDLVTYST 50
Query: 148 ILRGWFKMSWWGKCREFWEEMDKR-GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++ G+ K + E EM R G+ D+ +Y+ +D +C+ GK +A ++ +EMK K
Sbjct: 51 VINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLK 110
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
G++ D ++ +I + VD A+++Y+E+ C+ V+ + +I LC R+ EA
Sbjct: 111 GVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEA 170
Query: 267 YAVLAEMPKK---GCVPDVITYH------CFFRCLEKPREILGLFDRMIESGIRPKMDTY 317
Y + EM + PDV+TY C LEK ++LG+ + P + TY
Sbjct: 171 YELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVME---GRKCVPNVVTY 227
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
LL + G L ++++M GC P+ Y L+ L +D AR +EM A
Sbjct: 228 SSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTA 287
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 157/351 (44%), Gaps = 14/351 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN V++ L K ++ ++ M+D S P+ T+ + + ++ A +
Sbjct: 11 TYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILRE 70
Query: 93 L-DEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
+ G+ D V+Y ++VD LC + A E+ + + G VE +K ++ ++
Sbjct: 71 MVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMV----REMKLKG-VEPDKF-TFSALIT 124
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK---G 207
GW + + ++E+ D S S + +C+ + +A +L++EM+ +
Sbjct: 125 GWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGA 184
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
K DVV Y +I S ++ AM++ M C P+VVT ++++ LC+ G + +A
Sbjct: 185 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 244
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKF 324
+ M KGCVP+V+TY L ++ L D M + +Y LL +
Sbjct: 245 DLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGY 304
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
R G + ++K+M C PD Y LV + L+ AR E M
Sbjct: 305 CRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENM 355
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 177/417 (42%), Gaps = 49/417 (11%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + + ++A++ +E + TY+S++ L K + D + +L RM + +P
Sbjct: 200 CKSGNLEKAMKMLGVMEGRKCVPNVV-TYSSLLHGLCKAGDLDQALDLFRRMT-SKGCVP 257
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL- 123
N T+ + AH V+ A +++ D VSY L+D C + EA++L
Sbjct: 258 NVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLF 317
Query: 124 -------CFGENKNV-----GFSG---------LVEMNKTK--------IYNMILRGWFK 154
C + GF L+E KT Y++++ G+ +
Sbjct: 318 KEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSR 377
Query: 155 MSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVA 214
+ + EF +EM R V + +YS +D +CK+G+ A+++ K + K DVV
Sbjct: 378 AKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDKP----DVVT 433
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
Y VI + ++ + A+ + EM +PSV T N+VI LC G + EA+ +L M
Sbjct: 434 YTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMA 493
Query: 275 KKGCVPDVITYHCFFRC------LEKPREILGLFDRMIE-----SGIRPKMDTYVMLLRK 323
G P ++TY +E E+ + R + + + P+ + L+R
Sbjct: 494 AHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPE-QAFSALIRG 552
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + V +++ C P E A+VD L+ G + A K + GL
Sbjct: 553 LCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 8/245 (3%)
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEM-DKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
+ YN+++ G K K E +EM D + V DL +YS ++ CK G+ +A ++ +
Sbjct: 10 RTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILR 69
Query: 202 EM-KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
EM + G+ DVV Y +V+ + +D A + REM+ G +P T + +I C
Sbjct: 70 EMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNA 129
Query: 261 GRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFD-----RMIESGI-RPKM 314
+V EA + E+ C D ++ L + R I ++ M E G +P +
Sbjct: 130 RKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDV 189
Query: 315 DTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
TY L+ F + G L + ME C P+ Y++L+ L G LD A
Sbjct: 190 VTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRR 249
Query: 375 MFAKG 379
M +KG
Sbjct: 250 MTSKG 254
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 149/320 (46%), Gaps = 10/320 (3%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQE 122
+PN T+ + Y ++EA + GL+ ++Y +++ LC IE
Sbjct: 235 LPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGR-IEETS 293
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
E GF+ YN ++ G+ K+ + + EM + G+ D+ +Y+
Sbjct: 294 GVLAEMDRKGFAP-----DGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTS 348
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ MCK+G +A++ + +M +G++ + V Y ++I +D A R++ EM G
Sbjct: 349 LINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSG 408
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLF 302
P++VT N ++ C +GR+ EA +L M KG PDV++Y + +E+ F
Sbjct: 409 FPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAF 468
Query: 303 D---RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
M+E G+ P TY L++ L ++++M PDEF Y +L++
Sbjct: 469 QMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGY 528
Query: 360 IDKGMLDMARKYDEEMFAKG 379
+G L+ A +EM KG
Sbjct: 529 CKEGDLNEALNLHDEMIKKG 548
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 146/329 (44%), Gaps = 35/329 (10%)
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFG------LKDEVSYCN-------LVDALCEYKHVIEA 120
FK Y TA + + + N +DE G LKD CN LV C Y + IE
Sbjct: 92 FKLYKTAQNLAQDLAE-NSVDEKGNYFFQCLKDTYFMCNSSSAVFDLVVKSCSYLNFIEK 150
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCRE-------FWEEMDKRGV 173
K GF M YN IL + CR+ + EM GV
Sbjct: 151 ALNIVDLAKLNGF-----MPGVLSYNAILDSIVR------CRKPVIFAEKVYREMIASGV 199
Query: 174 VKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMR 233
++ SY+I + C +G ++ ++EM++ +VV YNTVI A + +D A +
Sbjct: 200 SLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFK 259
Query: 234 VYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE 293
+ R M G +P+++T N VI LC GR+ E VLAEM +KG PD +TY+
Sbjct: 260 LLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYC 319
Query: 294 KP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF 350
K + L L M+ +G+ P + TY L+ + G L + +M G P+
Sbjct: 320 KVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGV 379
Query: 351 AYNALVDALIDKGMLDMARKYDEEMFAKG 379
Y +L++ KG +D A + +EM G
Sbjct: 380 TYTSLINGFSQKGFMDEAYRIWDEMIRSG 408
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 183/439 (41%), Gaps = 54/439 (12%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A + + L FF +E + + TYN+VI K D ++ L+ M P
Sbjct: 214 CAAGNLEMGLRFFEEMERNRCLPNVV-TYNTVIGAYCKLKRIDEAFKLLRSMGLEGLE-P 271
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA---- 120
N T+ ++ + E G ++D G D V+Y LV+ C+ + +A
Sbjct: 272 NLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLH 331
Query: 121 -------------------QELCFGENKNVGFSGLVEMNKTKI------YNMILRGWFKM 155
+C N N +M+ + Y ++ G+ +
Sbjct: 332 SEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQK 391
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
+ + W+EM + G + +Y+ ++ C SG+ +A+ L + M+ KG+ DVV+Y
Sbjct: 392 GFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSY 451
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
+T+I + +D A ++ EM E G P +T +++I+ LCE R+ EA + EM
Sbjct: 452 STIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLN 511
Query: 276 KGCVPDVITYHCFFR--CLEKP-REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR- 331
K +PD TY C E E L L D MI+ G P TY +L+ + R
Sbjct: 512 KSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTRE 571
Query: 332 --------------PVFVVWKKMEELGCSPDEF-AYNALVDALIDKGMLDMARKYDEEMF 376
P + + + E CS EF + AL+ KG+++ A + E M
Sbjct: 572 AKRLLLKLFYDESIPNGITYDTLIE-SCSDIEFKSVVALIKGFCMKGLMNEADQVFESMI 630
Query: 377 AKGLSAKPREELGTKLVQG 395
+ + KP E + ++ G
Sbjct: 631 KR--NQKPNEAVYNVIIHG 647
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 8/211 (3%)
Query: 178 HSYSIYMDIMCKSGKPW----KAVKLYKEMKKKGIKMDVVAYNTVIRA-VGVSEGVDFAM 232
+S S D++ KS KA+ + K G V++YN ++ + V + V FA
Sbjct: 129 NSSSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAE 188
Query: 233 RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC- 291
+VYREM G +V + N +I+ C G + EM + C+P+V+TY+
Sbjct: 189 KVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAY 248
Query: 292 --LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE 349
L++ E L M G+ P + TY M++ R G + V +M+ G +PD
Sbjct: 249 CKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDG 308
Query: 350 FAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
YN LV+ G A EM GL
Sbjct: 309 VTYNTLVNGYCKVGNFHQALVLHSEMLRNGL 339
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 121/291 (41%), Gaps = 23/291 (7%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+Y+++I ++ E D ++ + M + S P+ T+ + + +NEA F +
Sbjct: 450 SYSTIIAGFCRYQELDRAFQMNAEMVEKGVS-PDAITYSSLIQGLCEQRRLNEACDLFQE 508
Query: 93 -LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
L++ L DE +Y +L++ C+ + EA L E GF + T YN+++ G
Sbjct: 509 MLNKSLLPDEFTYTSLINGYCKEGDLNEALNL-HDEMIKKGF-----LPDTVTYNVLING 562
Query: 152 WFKMSWWGKCRE-----FWEEMDKRGVVKD----------LHSYSIYMDIMCKSGKPWKA 196
K + + + F++E G+ D S + C G +A
Sbjct: 563 LNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEA 622
Query: 197 VKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKL 256
++++ M K+ K + YN +I V A ++Y+EM + G P VT ++K
Sbjct: 623 DQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKA 682
Query: 257 LCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIE 307
L G + V+ ++ + + D + K I +F+ + E
Sbjct: 683 LYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTE 733
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 157/358 (43%), Gaps = 47/358 (13%)
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC- 124
+ + +++ + V EA+ ++ E G D+V++ +LV+ C +V +A ++
Sbjct: 228 NVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVD 287
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F K GF V YN ++ G K+ + K E ++M R + +Y+ +
Sbjct: 288 FMIEK--GFDPDV-----YTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLI 340
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+CK + A L + + KG+ DV +NT+I+ + +S+ D AM ++ EM+ GC+
Sbjct: 341 SALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCK 400
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR-------- 296
P T + +I LC R++EA +L EM GC + + Y+ L K R
Sbjct: 401 PDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEI 460
Query: 297 ----EILG--------------------------LFDRMIESGIRPKMDTYVMLLRKFGR 326
E+LG L D+MI G++P TY LL F R
Sbjct: 461 FDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCR 520
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
G + + + M GC PD F Y L+ L G +D+A K + KG+ P
Sbjct: 521 VGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTP 578
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 161/372 (43%), Gaps = 49/372 (13%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDI-LGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
+F T TH N + + L + FD L+ ++K + SIPN TF
Sbjct: 37 TFKFPTLCTTPSSTTHHPLPPNETLLLQLTQSSSFDSITTLLKQLKSS-GSIPNATTFAT 95
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
+ + + H + + +E G K + ++ N+
Sbjct: 96 LIQSFTNFHEIENLLKILE--NELGFKPDTNF------------------------YNIA 129
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
+ LVE NK K+ M+ +M G+V D+ ++++ + +CK+ +
Sbjct: 130 LNALVEDNKLKLVEML----------------HSKMVNEGIVLDVSTFNVLIKALCKAHQ 173
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG-VDFAMRVYREMREMGCQPSVVTCN 251
A+ + +EM G+K D + + T+++ + EG ++ A+++ ++M GC + V+
Sbjct: 174 LRPAILMLEEMANHGLKPDEITFTTLMQGF-IEEGDLNGALKMKKQMLGYGCLLTNVSVK 232
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIES 308
++ C+ GRV EA + E+ ++G PD +T++ F + + L + D MIE
Sbjct: 233 VLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEK 292
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G P + TY L+ + G + ++M CSP+ YN L+ AL + ++ A
Sbjct: 293 GFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAA 352
Query: 369 RKYDEEMFAKGL 380
+ +KGL
Sbjct: 353 TDLARILVSKGL 364
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 153/353 (43%), Gaps = 50/353 (14%)
Query: 6 CYANDWKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C ++++A+E + +C + T TYN++I L K E + + +L R+ + +
Sbjct: 309 CKLGEFEKAIEILQQMILREC--SPNTVTYNTLISALCKENEIEAATDL-ARILVSKGLL 365
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ TF + + + + AM F ++ G K DE +Y L+D+LC + + EA L
Sbjct: 366 PDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALML 425
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
K + SG +YN ++ G K E +++M+ GV + +Y+
Sbjct: 426 L----KEMESSGCAR--NAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTL 479
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D +CK+ + +A +L +M +G+K D YN+++ ++ A + + M GC
Sbjct: 480 IDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGC 539
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV------------------------ 279
+P + T T+I LC GRV A +L + KG V
Sbjct: 540 EPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMR 599
Query: 280 -----------PDVITYHCFFRCL----EKPREILGLFDRMIESGIRPKMDTY 317
PD +T+ FR L +E + M+E GI P+ ++
Sbjct: 600 LFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSF 652
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 124/315 (39%), Gaps = 77/315 (24%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + AL+ +++ + F TYNS+I + K EF+ + ++ +M S P
Sbjct: 274 CRIGNVNDALDIVDFM-IEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECS-P 331
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCF 125
N T+ + + + A L GL +V C + +I Q LC
Sbjct: 332 NTVTYNTLISALCKENEIEAATDLARILVSKGLLPDV---------CTFNTLI--QGLCL 380
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
+N+++ E +EEM +G D +YSI +D
Sbjct: 381 SKNQDIAM-----------------------------EMFEEMKNKGCKPDEFTYSILID 411
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
+C + +A+ L KEM+ G + V YNT+I + S ++ A ++ +M +G
Sbjct: 412 SLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSR 471
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEM------PKK----------------------- 276
S VT NT+I LC+N RV EA ++ +M P K
Sbjct: 472 SSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIV 531
Query: 277 ------GCVPDVITY 285
GC PD+ TY
Sbjct: 532 QTMASNGCEPDIFTY 546
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 184/416 (44%), Gaps = 52/416 (12%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM----------KDNP 61
++A+E F + + T ++NSV++++ + L HR K N
Sbjct: 132 EKAIELFGRMVDEFQCRRTVRSFNSVLNVI-------IQEGLFHRALEFYECGVGGKTNI 184
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEA 120
S PN +F ++ K LV+ A+ F ++ + +V +YC L+D LC+ + EA
Sbjct: 185 S--PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEA 242
Query: 121 QEL--------CFGENK--NVGFSGLVE----MNKTKI---------------YNMILRG 151
L CF + NV +GL + + TK+ YN I+ G
Sbjct: 243 VLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIING 302
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + M V + +Y ++ + K G+ V L ++++G +
Sbjct: 303 LCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHAN 362
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
AY+T+I + E + AM ++++M E GCQP++V + +I LC G++ EA +L
Sbjct: 363 EYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILC 422
Query: 272 EMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM KGC P+ TY + K ++ + ++ M ++ P Y +L+ G
Sbjct: 423 EMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDG 482
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
LR ++W M G PD AY++++ L + G +++ K EM + ++P
Sbjct: 483 KLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQP 538
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 144/308 (46%), Gaps = 18/308 (5%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKL-DEFGLKDEVSYCNLVDALCEYKHVIEAQE 122
+PN T+ + +++A+ +++ + ++V+Y L++ L + ++
Sbjct: 290 VPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVH 349
Query: 123 LCFGENKNVGFSGLVEMNKTK---IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
L S L E Y+ ++ G FK + W++M ++G ++
Sbjct: 350 L---------LSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVV 400
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
YS +D +C+ GK +A ++ EM KG + Y+++I+ + A+RV++EM
Sbjct: 401 YSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMA 460
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI- 298
+ C P+ + + +I LCE+G++REA + M +G PDV+ Y L +
Sbjct: 461 KNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVE 520
Query: 299 --LGLFDRMI--ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
L LF+ M+ ES +P + TY +LLR + + + M + GC+PD N
Sbjct: 521 VGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNI 580
Query: 355 LVDALIDK 362
++AL +K
Sbjct: 581 FLNALREK 588
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 170/405 (41%), Gaps = 84/405 (20%)
Query: 32 DTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
T+ S+I+ +F + + RMK + F ++F+ Y AHL +A+ F
Sbjct: 81 STFYSLIENYANSGDFGTLFQVFDRMK-RERRVFIEKNFILVFRAYGKAHLPEKAIELFG 139
Query: 92 KL-DEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
++ DEF + V + +N +L
Sbjct: 140 RMVDEFQCRRTV----------------------------------------RSFNSVLN 159
Query: 151 GWFKMSWWGKCREFWE--EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ + + EF+E K + ++ S+++ + MCK G +A+++++EM +
Sbjct: 160 VIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKC 219
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ DV Y T++ + + +D A+ + EM+ GC PS VT N +I LC+ G +
Sbjct: 220 EPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTK 279
Query: 269 VLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
++ M KGCVP+ +TY+ CL+ K + + L DRM+ S P TY L+
Sbjct: 280 LVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLV 339
Query: 326 RWG--------------------------FLRPVFV---------VWKKMEELGCSPDEF 350
+ G + +F +WKKM E GC P+
Sbjct: 340 KQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIV 399
Query: 351 AYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
Y+AL+D L +G LD A++ EM KG + P + L++G
Sbjct: 400 VYSALIDGLCREGKLDEAKEILCEMVNKGCT--PNAFTYSSLIKG 442
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 151/328 (46%), Gaps = 16/328 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQ-- 121
PNH F I+ Y V++AM F+K+ + GL D V+Y ++ LC+ V +A
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431
Query: 122 -ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
E E + G +YN ++ W K +E EM RG+ D +
Sbjct: 432 FEQMIDERLSPG---------NIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFF 482
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ +D CK G+ ++ KL+ M + G+K D++ Y+T+I ++ +D A ++ M
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG 300
+G +P VT NT+I C+ R+ +A + EM G PD+ITY+ + L + R
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602
Query: 301 ---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
L+ + ESG + ++ TY ++L + +++ + + +N ++
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPR 385
AL+ G D A+ + A GL R
Sbjct: 663 ALLKVGRNDEAKDLFAALSANGLVPDVR 690
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 155/353 (43%), Gaps = 36/353 (10%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL 123
PN T+ I+ A ++ + + G + D +++ ++ LC K +A ++
Sbjct: 89 PNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDI 148
Query: 124 CFGENKNVG-----------FSGLVEMNKTK---------------------IYNMILRG 151
+G GL + N+++ Y ++ G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+FK K + EM RG++ ++ +YS + +CK+ KA+++ M K G+ +
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
YN+++ S A+ ++M G +P VVT N+++ LC+NGR EA +
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M K+G P++ TY + E+ GL D M+ +GI P + +L+ + + G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ +V+ KM + G +PD Y ++ L G ++ A +Y E+M + LS
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLS 441
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 172/407 (42%), Gaps = 81/407 (19%)
Query: 50 SWNLIHRMKDNPSSIP-NHATFRIMFKRYVTAHLVNEAMGTFNK-LDEFGLKDEVSYCNL 107
+ L+ M D+ P + ++ + + +++A GT+++ LD L + V+Y ++
Sbjct: 181 ALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSI 240
Query: 108 VDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEE 167
+ ALC+ + + +A E+ KN G+ M + YN I+ G+ + F ++
Sbjct: 241 IAALCKAQAMDKAMEVLTSMVKN----GV--MPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG---- 223
M GV D+ +Y+ MD +CK+G+ +A K++ M K+G+K ++ Y T+++
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 224 -----------VSEG--------------------VDFAMRVYREMREMGCQPSVVTCNT 252
V G VD AM V+ +MR+ G P VT T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCLEKPREIL------- 299
VI +LC++GRV +A +M + P I Y+ C F +K +E++
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 300 -------------------------GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
LFD M+ G++P + TY L+ + G +
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534
Query: 335 VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ M +G PD YN L++ ++ A EM + G+S
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVS 581
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 102/234 (43%), Gaps = 28/234 (11%)
Query: 165 WEEMDKRG---VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
+ M + G V +L +Y I M C +G+ + KKG +D +A+ +++
Sbjct: 76 YNRMARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKG 135
Query: 222 VGVSEGVDFAMR-VYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG--C 278
+ + AM V R M ++GC P+V + N ++K LC++ R +EA +L MP G C
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDC 195
Query: 279 VPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFV 335
PDV++Y K ++ G + M++ GI P + TY ++ + +
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELG 389
V M + G P+ YN++V G +P+E +G
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSG-------------------QPKEAIG 290
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 151/328 (46%), Gaps = 16/328 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQ-- 121
PNH F I+ Y V++AM F+K+ + GL D V+Y ++ LC+ V +A
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431
Query: 122 -ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
E E + G +YN ++ W K +E EM RG+ D +
Sbjct: 432 FEQMIDERLSPG---------NIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFF 482
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ +D CK G+ ++ KL+ M + G+K D++ Y+T+I ++ +D A ++ M
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG 300
+G +P VT NT+I C+ R+ +A + EM G PD+ITY+ + L + R
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602
Query: 301 ---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
L+ + ESG + ++ TY ++L + +++ + + +N ++
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPR 385
AL+ G D A+ + A GL R
Sbjct: 663 ALLKVGRNDEAKDLFAALSANGLVPDVR 690
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 155/353 (43%), Gaps = 36/353 (10%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PN T+ I+ A ++ + + G + D +++ L+ LC K +A ++
Sbjct: 89 PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148
Query: 124 CFGENKNVG-----------FSGLVEMNKTK---------------------IYNMILRG 151
+G GL + N+++ Y ++ G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+FK K + EM RG++ ++ +YS + +CK+ KA+++ M K G+ +
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
YN+++ S A+ ++M G +P VVT N+++ LC+NGR EA +
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M K+G P++ TY + E+ GL D M+ +GI P + +L+ + + G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ +V+ KM + G +PD Y ++ L G ++ A +Y E+M + LS
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLS 441
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 172/407 (42%), Gaps = 81/407 (19%)
Query: 50 SWNLIHRMKDNPSSIP-NHATFRIMFKRYVTAHLVNEAMGTFNK-LDEFGLKDEVSYCNL 107
+ L+ M D+ P + ++ + + +++A GT+++ LD L + V+Y ++
Sbjct: 181 ALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSI 240
Query: 108 VDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEE 167
+ ALC+ + + +A E+ KN G+ M + YN I+ G+ + F ++
Sbjct: 241 IAALCKAQAMDKAMEVLTSMVKN----GV--MPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG---- 223
M GV D+ +Y+ MD +CK+G+ +A K++ M K+G+K ++ Y T+++
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 224 -----------VSEG--------------------VDFAMRVYREMREMGCQPSVVTCNT 252
V G VD AM V+ +MR+ G P VT T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCLEKPREIL------- 299
VI +LC++GRV +A +M + P I Y+ C F +K +E++
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 300 -------------------------GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
LFD M+ G++P + TY L+ + G +
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534
Query: 335 VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ M +G PD YN L++ ++ A EM + G+S
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVS 581
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 28/234 (11%)
Query: 165 WEEMDKRG---VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
+ M + G V +L +Y I + C +G+ + KKG ++D +A+ +++
Sbjct: 76 YNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 135
Query: 222 VGVSEGVDFAMR-VYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG--C 278
+ + AM V R M ++GC P+V + N ++K LC+ R +EA +L MP G C
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDC 195
Query: 279 VPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFV 335
PDV++Y K ++ G + M++ GI P + TY ++ + +
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELG 389
V M + G P+ YN++V G +P+E +G
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSG-------------------QPKEAIG 290
>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
Length = 479
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 161/384 (41%), Gaps = 46/384 (11%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+Y ++ L + + D + + I M +P+ T+ ++ A ++ A+ F
Sbjct: 37 SYCYLVKALCRTGKIDKACSTIAEMARE-KLVPDVFTYNVVIDTLCKARRISRAIEFFET 95
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ E D V+Y L+ LC+ V +A L FG + G + Y ++ +
Sbjct: 96 MPE---PDVVTYNTLLGGLCKNGRVAQACSL-FGSMEGAGIT-----PSDVTYTTLIDVF 146
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
KM + + M R ++SY ++ +CK+ K +A +L++EMK G K D
Sbjct: 147 CKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDR 206
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V YNT+I + V + + A + M E G QP +T +I+ LC R++EA+ +
Sbjct: 207 VTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQG 266
Query: 273 MPKKGCVPDVITYH------CFFRCLEKPREI--------------------LG------ 300
M K+GC PD++T+ C R L + LG
Sbjct: 267 MAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFD 326
Query: 301 ----LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
L +M G+ P + TY + G W + +++M E G PD AYN LV
Sbjct: 327 RAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLV 386
Query: 357 DALIDKGMLDMARKYDEEMFAKGL 380
D LDMA K M GL
Sbjct: 387 DGFCKADRLDMAEKMVRYMDQSGL 410
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 125/269 (46%), Gaps = 25/269 (9%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI------YNMILRGWF 153
+ +SYC LV ALC + +A S + EM + K+ YN+++
Sbjct: 34 NALSYCYLVKALCRTGKIDKA------------CSTIAEMAREKLVPDVFTYNVVIDTLC 81
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
K + EF+E M + VV +Y+ + +CK+G+ +A L+ M+ GI V
Sbjct: 82 KARRISRAIEFFETMPEPDVV----TYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDV 137
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
Y T+I + A + + M C P+V + ++I LC+N +V +AY + EM
Sbjct: 138 TYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEM 197
Query: 274 PKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
GC PD +TY+ L ++ E L M+E+G +P T+ L+ +
Sbjct: 198 KLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRI 257
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ FV+++ M + GC+PD + LV L
Sbjct: 258 KEAFVLFQGMAKQGCAPDLVTHTVLVSKL 286
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 159/380 (41%), Gaps = 18/380 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C +A F +E T + TY ++ID+ K +F+ ++ L+ M S P
Sbjct: 112 CKNGRVAQACSLFGSME-GAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCS-P 169
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
++ + V++A F ++ G K D V+Y L+ LC + + EA++L
Sbjct: 170 TVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLL 229
Query: 125 FGENKNVGFSGLVEMNKTKI-YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+N GF KI + ++ G + ++ M K+G DL ++++
Sbjct: 230 TVMVEN-GF------QPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVL 282
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ +C K A+ + + V+ Y + R +G G D A R+ ++M G
Sbjct: 283 VSKLCILRKLRPALSVVRNYP--ACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGV 340
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFD 303
P+VVT K L + AY M ++G PD++ Y+ K + L + +
Sbjct: 341 PPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKA-DRLDMAE 399
Query: 304 RMI----ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+M+ +SG+ P + TY L+ R G + + + M G PD ++ LV L
Sbjct: 400 KMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGL 459
Query: 360 IDKGMLDMARKYDEEMFAKG 379
G D A + ++G
Sbjct: 460 FMVGQADAAYSFLNLAMSQG 479
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 9/220 (4%)
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
SY + +C++GK KA EM ++ + DV YN VI + + + A+ + M
Sbjct: 37 SYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETM 96
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI 298
E P VVT NT++ LC+NGRV +A ++ M G P +TY K +
Sbjct: 97 PE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQF 152
Query: 299 ---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
GL M P + +Y ++ + + + ++++M+ GC PD YN L
Sbjct: 153 ETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTL 212
Query: 356 VDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+ L K L A+ M G +P + T L++G
Sbjct: 213 IHGLCVKQRLHEAKDLLTVMVENGF--QPDKITFTALIEG 250
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 96/215 (44%), Gaps = 9/215 (4%)
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D++ ++ + + V +++ + + K + ++Y +++A+ + +D A EM
Sbjct: 7 LDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKL 66
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LG 300
P V T N VI LC+ R+ A MP+ PDV+TY+ L K +
Sbjct: 67 VPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACS 122
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
LF M +GI P TY L+ F + + + + M CSP ++Y ++++ L
Sbjct: 123 LFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLC 182
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+D A + EEM G KP L+ G
Sbjct: 183 KNRKVDQAYQLFEEMKLAG--CKPDRVTYNTLIHG 215
>gi|297839351|ref|XP_002887557.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333398|gb|EFH63816.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 845
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 174/398 (43%), Gaps = 51/398 (12%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
+++ AL FF W++ F H TY +++ LG+ +F L+ M + PN
Sbjct: 327 DNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINRLLDEMVKD-GCKPNTV 385
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE 127
T+ + Y A+ +NEAM F ++ E G + D V+YC L+D I A+
Sbjct: 386 TYNRLIHSYGRANYLNEAMNVFKQMQEAGCEPDRVTYCTLID--------IHAK------ 431
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
+G +++ + ++ M G+ D +YS+ ++ +
Sbjct: 432 ------AGFLDI---------------------AMDMYQRMQAAGLSPDTFTYSVIINCL 464
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
K+G A +L+ EM +G ++V +N +I + + A+++YR+M+ G QP
Sbjct: 465 GKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDK 524
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGL---FDR 304
VT + V+++L G + EA V AEM +K VPD Y K + +
Sbjct: 525 VTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQE 584
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID-KG 363
M+ +G+RP + T LL F R + + + + M LG P Y L+ D +
Sbjct: 585 MLHAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARS 644
Query: 364 MLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
DM + ++ A +S P K+ G DG++
Sbjct: 645 NFDMG--FCGQLMA--VSGHPAHMFLLKMPPAGPDGQK 678
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 146/318 (45%), Gaps = 8/318 (2%)
Query: 69 TFRIMFKRYVTAHLVNEAMG-TFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFG 126
TF + K ++AM ++ E +V C L+ LC+ EA EL
Sbjct: 124 TFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHM 183
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
+ G ++ Y ++ G+FK K + EM R + D+ +YS +
Sbjct: 184 MADDRGGGSAPDVVS---YTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAA 240
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+CK KA+++ M K G+ + + YN+++ SE A+ ++MR G +P
Sbjct: 241 LCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPD 300
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFD 303
VVT N+++ LC+NGR EA + M K+G PD+ TY + E+ L D
Sbjct: 301 VVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLD 360
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
M+ +GI P + +L+ + + + +V+ KM + G +P+ Y A++ L G
Sbjct: 361 LMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSG 420
Query: 364 MLDMARKYDEEMFAKGLS 381
+D A Y E+M +GL+
Sbjct: 421 SVDDAMLYFEQMIDEGLT 438
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 171/408 (41%), Gaps = 82/408 (20%)
Query: 50 SWNLIHRMKDN--PSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK-LDEFGLKDEVSYCN 106
+ L+H M D+ S P+ ++ + + ++A T+++ LD D V+Y +
Sbjct: 177 ALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSS 236
Query: 107 LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE 166
++ ALC+ + + +A E+ KN G+ M YN IL G+ + F +
Sbjct: 237 IIAALCKGQAMDKAMEVLTTMVKN----GV--MPNCMTYNSILHGYCSSEQPKEAIGFLK 290
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY----------- 215
+M GV D+ +Y+ MD +CK+G+ +A K++ M K+G++ D+ Y
Sbjct: 291 KMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKG 350
Query: 216 ------------------------NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
N +I A E VD AM V+ +MR+ G P+VVT
Sbjct: 351 ALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYG 410
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCLEKPREIL------ 299
VI +LC++G V +A +M +G P++I Y C F +K E++
Sbjct: 411 AVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDR 470
Query: 300 --------------------------GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
LFD M+ G++P + TY L+ + G +
Sbjct: 471 GICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEA 530
Query: 334 FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ M +G PD YN L++ +D A +EM + G+S
Sbjct: 531 TKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVS 578
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 149/325 (45%), Gaps = 10/325 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+H F I+ Y V+EAM F+K+ + GL + V+Y ++ LC+ V +A L
Sbjct: 369 PDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAM-L 427
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + + G + +Y ++ W K E EM RG+ + ++
Sbjct: 428 YFEQMIDEGLT-----PNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSI 482
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ CK G+ ++ KL+ M + G+K +V+ Y+T+I ++ +D A ++ M +G
Sbjct: 483 IHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGM 542
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG--- 300
+P VT NT+I C R+ +A A+ EM G P++ITY+ + L R
Sbjct: 543 KPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 602
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L+ + +SG + ++ TY ++L + +++ + + +N ++ AL+
Sbjct: 603 LYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 662
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPR 385
G D A+ + A GL R
Sbjct: 663 KVGRNDEAKDLFAALSANGLVPDVR 687
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 112/279 (40%), Gaps = 53/279 (18%)
Query: 165 WEEMDKRG---VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
+ M + G V +H+Y I + C++G+ + KKG +++ + + +++
Sbjct: 72 YNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKG 131
Query: 222 VGVSEGVDFAMR-VYREMREMGCQPSVVTCNTVIKLLCENGRVRE--------------- 265
+ + AM V R M E+ C P V +C ++K LC+ R +E
Sbjct: 132 LCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGG 191
Query: 266 -----------------------AYAVLAEMPKKGCVPDVITYH------CFFRCLEKPR 296
AY+ EM + PDV+TY C + ++K
Sbjct: 192 SAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAM 251
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
E+L M+++G+ P TY +L + + KKM G PD YN+L+
Sbjct: 252 EVL---TTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLM 308
Query: 357 DALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
D L G ARK + M +GL +P L+QG
Sbjct: 309 DYLCKNGRSTEARKIFDSMTKRGL--EPDIATYCTLLQG 345
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 170/412 (41%), Gaps = 81/412 (19%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY++++ LGK + + L+ M ++ PN TF I + A ++EA G +
Sbjct: 229 TYSALMVALGKRRDIETVMGLLQEM-ESLGLRPNIYTFTICIRILGRAGKIDEAYGILKR 287
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+D+ G D V+Y L+DALC + A+EL + V Y +L
Sbjct: 288 MDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVT------YITLLDK 341
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ +EFW EM+ G + D+ +++I +D +CK GK +A MKK+G+ +
Sbjct: 342 FSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPN 401
Query: 212 VVAYNTVI----RAVGVSEGVDF-------------------------------AMRVYR 236
+ YNT+I R + E ++ A++ +
Sbjct: 402 LHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFE 461
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK-- 294
+M+ G P++V CN + L E GR+ EA + K G PD ITY+ RC K
Sbjct: 462 KMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAG 521
Query: 295 ------------------PREIL------------------GLFDRMIESGIRPKMDTYV 318
P ++ +F RM E + P + TY
Sbjct: 522 RVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYN 581
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
LL G+ G ++ ++K M C P+ ++N L+D L G +D+A K
Sbjct: 582 TLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALK 633
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 113/219 (51%), Gaps = 3/219 (1%)
Query: 166 EEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVS 225
E+M K G V + +SY + ++ KSG +A+K+Y+ M +GIK + Y+ ++ A+G
Sbjct: 181 EKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKR 240
Query: 226 EGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
++ M + +EM +G +P++ T I++L G++ EAY +L M GC PDV+TY
Sbjct: 241 RDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTY 300
Query: 286 HCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE 342
L K LF +M S +P TY+ LL KF G L + W +ME
Sbjct: 301 TVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEA 360
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G PD + L+DAL G +D A + M +G++
Sbjct: 361 DGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVA 399
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 139/296 (46%), Gaps = 19/296 (6%)
Query: 33 TYNSVIDILGKFFE----FDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
TYN +D LGK + FDL ++ R PN T I+ V ++ +++A+
Sbjct: 825 TYNLFLDALGKSGKIKELFDLYEEMLFR-----GCKPNTITHNIVIFGLVKSNSLDKAID 879
Query: 89 TFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
+ L +Y L+D L + + EA++ F E + G M +YN+
Sbjct: 880 LYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQF-FEEMLDYGC-----MPNCPLYNI 933
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++ G+ K E + M K G+ DL SYSI +D +C GK A+ ++E+K G
Sbjct: 934 LMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSG 993
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ D+V YN +I +G S+ V+ A+ ++ EMR G P + T N +I L G V EA
Sbjct: 994 LDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAG 1053
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLE---KPREILGLFDRMIESGIRPKMDTYVML 320
+ E+ KG P+V TY+ R P ++ +M+ G RP T+ L
Sbjct: 1054 KMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 177/363 (48%), Gaps = 13/363 (3%)
Query: 16 EFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFK 75
EF++ +E D + T+ +ID L K + D ++ + MK + PN T+ +
Sbjct: 353 EFWSEMEADGYLPDVV-TFTILIDALCKVGKVDEAFGTLDVMKKQGVA-PNLHTYNTLIC 410
Query: 76 RYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFS 134
+ + ++EA+ FN ++ GL+ +Y +D + +A + F + K G
Sbjct: 411 GLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIK-TFEKMKTNGIV 469
Query: 135 GLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPW 194
+ +Y++ +G + + +EF+ + K G+ D +Y+I M K+G+
Sbjct: 470 PNIVACNASLYSLAEQGRLE-----EAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVD 524
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
A+KL EM++ G +VV N++I + ++ VD A ++++ M+EM P+VVT NT++
Sbjct: 525 DAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLL 584
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIR 311
L + GRV+EA A+ M C P+ I+++ CL K E+ L + RM E
Sbjct: 585 AGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCF 644
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
P + TY ++ + + F ++ +M+++ PD L+ +I G ++ A +
Sbjct: 645 PDVLTYNTVIYGLIKENRVNYAFWLFHQMKKV-IYPDYVTLCTLLPGVIKDGRIEDAFRV 703
Query: 372 DEE 374
+E
Sbjct: 704 AKE 706
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 162/344 (47%), Gaps = 14/344 (4%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKR 76
F ++ C T + + YNS+ID L K +++W L ++MK N P+ T+ +
Sbjct: 775 FLKLTKSFC-ITPSLEAYNSLIDGLLKARLTEMAWGLFYKMK-NAGCTPDVFTYNLFLDA 832
Query: 77 YVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSG 135
+ + E + ++ G K + +++ ++ L + + +A +L + SG
Sbjct: 833 LGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDL-----MSG 887
Query: 136 LVEMNKTK-IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPW 194
+ + T Y ++ G K+ + ++F+EEM G + + Y+I M+ K G
Sbjct: 888 --DFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVE 945
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
A +L++ M K+GI+ D+ +Y+ ++ + + VD A+ + E++ G P +V N +I
Sbjct: 946 TACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMI 1005
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIR 311
L + RV EA ++ EM +G PD+ TY+ L E +++ + G+
Sbjct: 1006 NGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLE 1065
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
P + TY L+R G + V+KKM GC P+ + L
Sbjct: 1066 PNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 179/399 (44%), Gaps = 40/399 (10%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILG---KFFEFDLSWNLIHRMKDNPSSIP 65
+D +A FFN V HTT+T N V+++L + + + +NL+ + S
Sbjct: 100 SDPNQAFSFFNSVAEMPRVIHTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINT 159
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLV----------DALCEY 114
F++++ R + EA K+ + G + + SY L+ +AL Y
Sbjct: 160 YLTIFKVLYIR----GGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVY 215
Query: 115 KHVIE-----------AQELCFGENKNV-GFSGLV-EMNKTKI------YNMILRGWFKM 155
+ ++ A + G+ +++ GL+ EM + + + +R +
Sbjct: 216 RRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRA 275
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
+ + MD G D+ +Y++ +D +C +GK A +L+ +MK K D V Y
Sbjct: 276 GKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTY 335
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
T++ +D + EM G P VVT +I LC+ G+V EA+ L M K
Sbjct: 336 ITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKK 395
Query: 276 KGCVPDVITYH---CFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
+G P++ TY+ C L + E L LF+ M G+ TY++ + +G+ G
Sbjct: 396 QGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGK 455
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
++KM+ G P+ A NA + +L ++G L+ A+++
Sbjct: 456 AIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEF 494
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 137/320 (42%), Gaps = 43/320 (13%)
Query: 99 KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWW 158
+D+ LV LC++ ++A + K+ + +E YN ++ G K
Sbjct: 750 EDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEA-----YNSLIDGLLKARLT 804
Query: 159 GKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTV 218
+ +M G D+ +Y++++D + KSGK + LY+EM +G K + + +N V
Sbjct: 805 EMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIV 864
Query: 219 IRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGC 278
I + S +D A+ +Y ++ P+ T +I L + GR+ EA EM GC
Sbjct: 865 IFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGC 924
Query: 279 VPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYV----------------- 318
+P+ Y+ K ++ LF RM++ GIRP + +Y
Sbjct: 925 MPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALH 984
Query: 319 ------------------MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+++ GR + ++ +M G +PD + YNAL+ L
Sbjct: 985 YFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLG 1044
Query: 361 DKGMLDMARKYDEEMFAKGL 380
GM++ A K EE+ KGL
Sbjct: 1045 IAGMVEEAGKMYEELQLKGL 1064
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 10/157 (6%)
Query: 231 AMRVYREMREMGCQPSVV----TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
A + + EM P V+ TCN V+++L + RV + V M K+ + TY
Sbjct: 105 AFSFFNSVAEM---PRVIHTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYL 161
Query: 287 CFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
F+ L RE ++M + G +Y+ L+ + GF R V+++M
Sbjct: 162 TIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSE 221
Query: 344 GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G P Y+AL+ AL + ++ +EM + GL
Sbjct: 222 GIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGL 258
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 178/380 (46%), Gaps = 14/380 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTH-TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C D + A++ + D T + Y+++ID L K+ ++ L M S
Sbjct: 175 CKIGDTRGAIKLLRKI--DGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGIS- 231
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
+ T+ + + + EA+G N++ + V +Y LVDALC+ V EA+ +
Sbjct: 232 ADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSV 291
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
V V+ + Y+ ++ G+F + K + + M GV D+H+Y+I
Sbjct: 292 L-----AVMLKACVKPDVIT-YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTIL 345
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
++ CK+ +A+ L+KEM +K + +V Y+++I + S + + + EMR+ G
Sbjct: 346 INGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQ 405
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILG 300
V+T +++I LC+NG + A A+ +M + P++ T+ L K ++
Sbjct: 406 PADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQE 465
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+F ++ G + TY +++ + G L + KME+ GC P+ F + ++ AL
Sbjct: 466 VFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALF 525
Query: 361 DKGMLDMARKYDEEMFAKGL 380
K D A K +M A+GL
Sbjct: 526 KKDENDKAEKLLRQMIARGL 545
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 158/356 (44%), Gaps = 17/356 (4%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
+N ++D K + + +L HR++ P+ T I+ + + K+
Sbjct: 62 FNKILDSFAKMKHYSTAVSLSHRLELKGIQ-PDLITLNILINCFCHMGQITFGFSVLAKI 120
Query: 94 DEFGLK-DEVSYCNLVDALC---EYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+ G D V+ L+ LC + K + + + GF ++N+ Y ++
Sbjct: 121 LKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ----GF----QLNQVS-YATLI 171
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G K+ + ++D R ++ YS +D +CK +A L+ EM KGI
Sbjct: 172 NGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGIS 231
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
DVV Y+T+I + + A+ + EM P+V T N ++ LC+ G+V+EA +V
Sbjct: 232 ADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSV 291
Query: 270 LAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
LA M K PDVITY + + + ++ +F+ M G+ P + TY +L+ F +
Sbjct: 292 LAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCK 351
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ ++K+M + P Y++L+D L G + +EM +G A
Sbjct: 352 NKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPA 407
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 85/174 (48%), Gaps = 3/174 (1%)
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
++ +N ++ + + A+ + + G QP ++T N +I C G++ ++VLA
Sbjct: 59 IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118
Query: 272 EMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
++ K+G PD +T + + CL+ + ++ L D+++ G + +Y L+ + G
Sbjct: 119 KILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIG 178
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
R + +K++ P+ Y+ ++DAL ++ A EM KG+SA
Sbjct: 179 DTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISA 232
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 118/237 (49%), Gaps = 3/237 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN +L+G K + K +E + MD+ V D+ S++I + C+ G+ +AVK YKEM+
Sbjct: 230 YNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQ 289
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+ + DVV+++ +I +D A REM+ +G P V VI C G +
Sbjct: 290 HRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMS 349
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLL 321
EA V EM GC+PDV+TY+ L K +L L + M E G+ P + T+ L+
Sbjct: 350 EALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLI 409
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+ R G ++ + PD YN+L+D + KG L A + ++M A+
Sbjct: 410 HGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAR 466
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 184/386 (47%), Gaps = 24/386 (6%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + K A++F+ ++ + T +++ +I + + E D + + MK +P
Sbjct: 273 CRVGEVKEAVKFYKEMQHR-YVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMK-GLGLVP 330
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELC 124
+ + ++ + A ++EA+ +++ FG L D V+Y L++ LC+ +++A++L
Sbjct: 331 DGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKL- 389
Query: 125 FGENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
L EM + + + ++ G+ + + + ++ + ++ + D+
Sbjct: 390 -----------LNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVV 438
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+Y+ +D MC+ G KA +L+ +M + I + + Y+ +I + V+ A EM
Sbjct: 439 TYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEM 498
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI 298
+ G P++ T N++IK C +G V++ L +M + PD+IT++ K +
Sbjct: 499 VKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENM 558
Query: 299 LG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
G +F+ M + +RP TY M++ F G ++ V+K M + G PD + Y +L
Sbjct: 559 HGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSL 618
Query: 356 VDALIDKGMLDMARKYDEEMFAKGLS 381
++ + G A + +EM +G +
Sbjct: 619 INGHVTAGNSKQAFQLHDEMIHRGFA 644
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 140/327 (42%), Gaps = 16/327 (4%)
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCE---YKHVI 118
S P F ++ + Y + EA F L + + S N + A+ + H+
Sbjct: 82 SPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLA 141
Query: 119 -EAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
EA L + V L N+++ + K + EM+KR V D+
Sbjct: 142 QEAYRLVLSSDSEVNAYTL---------NIMVHSYCKTLEFDGADTVISEMEKRCVFPDV 192
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
++++ +D ++G A+ L M +G+K +V YN+V++ + D A V+R
Sbjct: 193 VTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRT 252
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
M + P V + N +I C G V+EA EM + PDV+++ C + E
Sbjct: 253 MDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGE 312
Query: 298 I--LGLFDRMIES-GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
+ G + R ++ G+ P Y M++ F R G + V +M GC PD YN
Sbjct: 313 MDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNT 372
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLS 381
L++ L + L A K EM +G++
Sbjct: 373 LLNGLCKQHRLLDAEKLLNEMEERGVT 399
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 123/285 (43%), Gaps = 13/285 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++++ L K + L++ M++ P+ TF + Y A+ F+
Sbjct: 369 TYNTLLNGLCKQHRLLDAEKLLNEMEER-GVTPDLCTFTTLIHGYCRQGNFENALQLFDT 427
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI-YNMILR 150
L L+ D V+Y +L+D +C + +A EL + E+ I Y++++
Sbjct: 428 LLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAR-------EILPNHITYSILID 480
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
+ F +EM K+G + ++ +Y+ + C+SG K + ++M++ +
Sbjct: 481 SHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFP 540
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
D++ +NT+I E + A V+ M + +P VT N +I E G +++A V
Sbjct: 541 DLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVF 600
Query: 271 AEMPKKGCVPDVITYHCFFR---CLEKPREILGLFDRMIESGIRP 312
M G PD TY ++ L D MI G P
Sbjct: 601 KGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAP 645
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 184/413 (44%), Gaps = 50/413 (12%)
Query: 6 CYANDWKRALEFFNWVET--DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
C + +A+ F+ ++ DC TYN++++ K + L MK
Sbjct: 123 CRSGQCDKAMSLFSQMKRNYDCVVPDCV-TYNTLVNGFCKAKRLAEARVLFEAMKKGGDC 181
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQE 122
PN T+ ++ Y + V E +G +++ GLK +V Y +L+ A C + +E
Sbjct: 182 RPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRE 241
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L F E S V Y+ +++G + W + E ++M RGV D+ +Y++
Sbjct: 242 L-FDEMLRRKVSPNV-----VTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTV 295
Query: 183 YMDIMCKSGKPWKAVK-----------------------LYKE------------MKKKG 207
D +CK+G+ A+K L KE M KKG
Sbjct: 296 LADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKG 355
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREM--REMGCQPSVVTCNTVIKLLCENGRVRE 265
K D V YNT+++ + + + AM +++ + + +P V TCN +I+ LC+ GRV +
Sbjct: 356 KKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHD 415
Query: 266 AYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLR 322
A + + M + G +++TY+ + K E L L+ +ESG P TY +++
Sbjct: 416 AARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMIN 475
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
+ L ++ KM++ G P YNAL+ +L + L+ AR +EM
Sbjct: 476 GLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEM 528
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 173/384 (45%), Gaps = 10/384 (2%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKR 76
F ++ D + +++ID L K ++D ++ H+M + +P + + +
Sbjct: 28 FHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMV-SALVLPRFTSLSALTES 86
Query: 77 YVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV-DALCEYKHVIEAQELCFGENKNVGFSG 135
+V H + A + + + G V NLV C +A L +N +
Sbjct: 87 FVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRN--YDC 144
Query: 136 LVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVK-DLHSYSIYMDIMCKSGKPW 194
+V T YN ++ G+ K + R +E M K G + +L +YS+ +D CKSG+
Sbjct: 145 VVPDCVT--YNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVG 202
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
+ + L +EM+++G+K DV Y+++I A ++ ++ EM P+VVT + ++
Sbjct: 203 EGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLM 262
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIR 311
+ L GR REA +L +M +G PDV+ Y L K + + + D M++ G
Sbjct: 263 QGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEE 322
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
P TY +++ + + F V + M + G PD YN L+ L G + A
Sbjct: 323 PGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDL 382
Query: 372 DEEMFAKGLSAKPREELGTKLVQG 395
+ + ++ KP L+QG
Sbjct: 383 WKLLLSEKFHVKPDVFTCNNLIQG 406
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 162/353 (45%), Gaps = 24/353 (6%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T TYN V++ L K D ++ ++ M P+ T+ + K A ++EAM +
Sbjct: 325 TLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKK-PDAVTYNTLLKGLCGAGKIHEAMDLW 383
Query: 91 NKL--DEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKI 144
L ++F +K +V CN L+ LC+ V +A + S +VEM
Sbjct: 384 KLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARI---------HSSMVEMGLQGNIVT 434
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G+ + + W+ + G + +YS+ ++ +CK A L+ +MK
Sbjct: 435 YNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMK 494
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
GI+ V+ YN ++ ++ + ++ A +++EMR + VV+ N +I + G V+
Sbjct: 495 DSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVK 554
Query: 265 EAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLL 321
A +L+EM VPD +T+ F L E +GL+++M+ G P + + LL
Sbjct: 555 SAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLL 614
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
+ +G G + + +M + + ++ + + I + M+R D E
Sbjct: 615 KGYGLKGETEKIISLLHQMAD-----KDVVLDSKLTSTILACLCHMSRNLDVE 662
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 97/213 (45%), Gaps = 7/213 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
PN T+ +M +++ A G F K+ + G++ V Y L+ +LC + +A+ L
Sbjct: 465 PNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSL 524
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F E +NV + V +N+I+ G K +E EM +V D ++SI
Sbjct: 525 -FQEMRNVNHNVDVVS-----FNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSIL 578
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
++ K G +A+ LY++M G VV ++++++ G+ + + + +M +
Sbjct: 579 INRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDV 638
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
+T++ LC R + +L + ++
Sbjct: 639 VLDSKLTSTILACLCHMSRNLDVEKILPKFSQQ 671
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 167/371 (45%), Gaps = 34/371 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY I +LG+ D + ++ RM+D+ P+ T+ ++ TA +++AM F K
Sbjct: 266 TYTICIRVLGRAGRIDEACRIMKRMEDDGCG-PDVVTYTVLIDALCTAGKLDDAMELFVK 324
Query: 93 LDEFGLK-DEVSYCNLVDALCE-----------------------YKHVIEAQELCFGEN 128
+ K D V+Y ++D + I LC N
Sbjct: 325 MKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGN 384
Query: 129 KNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ F L M K + YN ++ G +++ + + M+ GVV ++Y +
Sbjct: 385 IDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYIL 444
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++D KSG+ KA++ +++MK +GI ++VA N + ++ + A ++ ++ G
Sbjct: 445 FIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNG 504
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REIL 299
P VT N ++K + G+V EA +L++M + C PD+I + L K E
Sbjct: 505 LAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAW 564
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+F R+ + + P + TY L+ G+ G ++ ++ M GC P+ +N ++D L
Sbjct: 565 KMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCL 624
Query: 360 IDKGMLDMARK 370
+D+A K
Sbjct: 625 CKNDEVDLALK 635
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 164/383 (42%), Gaps = 25/383 (6%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDIL-------GKFFEFDLSWNLIHRMKDNPS 62
D A +FN V HTT+T N +++IL F+L N I + N
Sbjct: 103 DPTDAFSYFNSVAEMPFVVHTTETCNHMLEILRIHRRVGDMVVVFNLMQNQIIKRDLN-- 160
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQ 121
T+ I+FK + + F K+ E G + SY L+ L + EA
Sbjct: 161 ------TYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREAL 214
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
E+ + + GL KT M+ G K + EEM+ G+ ++++Y+
Sbjct: 215 EM----YRRMVLEGLKPSLKTFSALMVATG--KRRDTETVKSLLEEMESLGLKPNIYTYT 268
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
I + ++ ++G+ +A ++ K M+ G DVV Y +I A+ + +D AM ++ +M+
Sbjct: 269 ICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKAS 328
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI--- 298
+P VT T++ + G + +EM G PDVIT+ L K I
Sbjct: 329 SHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEA 388
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
L D M + G+ P + TY L+ R L ++ ME LG P + Y +D
Sbjct: 389 FHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDF 448
Query: 359 LIDKGMLDMARKYDEEMFAKGLS 381
G D A + E+M +G++
Sbjct: 449 YGKSGRSDKALETFEKMKIRGIA 471
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 142/293 (48%), Gaps = 13/293 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN ++D GK + + + L +M + S PN T I+ V ++ +++A+ F
Sbjct: 827 TYNLLLDAHGKSGKINELFELYEQMICS-SCKPNTITHNIIIANLVKSNSLDKALDLFYD 885
Query: 93 L--DEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
L +F +Y L+D L + + EA+EL F E + G IYN+++
Sbjct: 886 LVSGDFS-PTPCTYGPLLDGLLKSGRLEEAKEL-FEEMVDYGCRP-----NNAIYNILIN 938
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
G+ K E ++ M + G+ DL SY+ + +C++G+ A+ ++++K+ G+ +
Sbjct: 939 GFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYL 998
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
D +AYN +I +G S ++ A+ +Y EM+ G P + T N++I L G V +A +
Sbjct: 999 DSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLY 1058
Query: 271 AEMPKKGCVPDVITYHCFFRCLE---KPREILGLFDRMIESGIRPKMDTYVML 320
E+ G P+V TY+ R ++ RM+ G P T+ L
Sbjct: 1059 EELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 135/291 (46%), Gaps = 18/291 (6%)
Query: 99 KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWF----- 153
KD ++ LC++K + AQ + K +G +E YN ++ G+
Sbjct: 752 KDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLES-----YNFLIEGFLGVHND 806
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
+M+W + EM G D+ +Y++ +D KSGK + +LY++M K + +
Sbjct: 807 EMAW-----NLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTI 861
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
+N +I + S +D A+ ++ ++ P+ T ++ L ++GR+ EA + EM
Sbjct: 862 THNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEM 921
Query: 274 PKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
GC P+ Y+ K ++ LF RM+ GIRP + +Y L+ G +
Sbjct: 922 VDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRV 981
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
++K+++ G D AYN ++D L ++ A +EM ++G++
Sbjct: 982 DDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGIN 1032
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 145/308 (47%), Gaps = 12/308 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++I L + D + +L + M + +P T+ + Y + ++A+ TF K
Sbjct: 406 TYNTLISGLLRVNRLDDALDLFNNM-ETLGVVPTAYTYILFIDFYGKSGRSDKALETFEK 464
Query: 93 LDEFGLKDEVSYCNL-VDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G+ + CN + +L E + EA+ + F K+ G + + YNM+++
Sbjct: 465 MKIRGIAPNIVACNASLYSLAEMGRLREAK-VIFNRLKSNGLAP-----DSVTYNMMMKC 518
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K + E +M + D+ + ++ + K+G+ +A K++ +K +
Sbjct: 519 YSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPT 578
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
VV YNT+I +G V AM ++ M GC P+ +T NT++ LC+N V A +L
Sbjct: 579 VVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLY 638
Query: 272 EMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+M C+PDV+T++ L ++ + + LF +M + + P T LL + G
Sbjct: 639 KMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQM-KKMLTPDCVTLCTLLPGVVKNG 697
Query: 329 FLRPVFVV 336
+ F +
Sbjct: 698 LMEDAFKI 705
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 147/355 (41%), Gaps = 44/355 (12%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T ++YN +I+ +++WNL MK N P+ T+ ++ +A G
Sbjct: 789 TLESYNFLIEGFLGVHNDEMAWNLFTEMK-NAGCAPDVFTYNLLL----------DAHGK 837
Query: 90 FNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
K++E + Q +C N T +N+I+
Sbjct: 838 SGKINEL-------------------FELYEQMICSSCKPN-----------TITHNIII 867
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
K + K + + ++ +Y +D + KSG+ +A +L++EM G +
Sbjct: 868 ANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCR 927
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
+ YN +I G + V+ A +++ M G +P + + +++ LCE GRV +A
Sbjct: 928 PNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHY 987
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGR 326
++ + G D I Y+ L + I L L+D M GI P + TY L+ G
Sbjct: 988 FEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGV 1047
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G + ++++++ +G P+ F YNAL+ G D A + M G S
Sbjct: 1048 AGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCS 1102
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 172/409 (42%), Gaps = 48/409 (11%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
+RA+E F + T T T+N+++D L K E DL+ ++++M + +P+ TF
Sbjct: 596 QRAMELFASM-TGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMT-TMNCMPDVLTFN 653
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELC------- 124
+ V V++A+ F+++ + D V+ C L+ + + + +A ++
Sbjct: 654 TIIHGLVIEKRVSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRL 713
Query: 125 -------------------FGENKNVGFS-----------GLVEMNKTKIYNMILRGWFK 154
G K + F G V M K+ +
Sbjct: 714 GVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVA 773
Query: 155 MSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVA 214
S + + F +E+ GV L SY+ ++ A L+ EMK G DV
Sbjct: 774 QSVFIR---FTKEL---GVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFT 827
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
YN ++ A G S ++ +Y +M C+P+ +T N +I L ++ + +A + ++
Sbjct: 828 YNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLV 887
Query: 275 KKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
P TY L K E LF+ M++ G RP Y +L+ FG+ G +
Sbjct: 888 SGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVN 947
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
++K+M G PD +Y +LV L + G +D A Y E++ GL
Sbjct: 948 TACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGL 996
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 92/191 (48%), Gaps = 5/191 (2%)
Query: 197 VKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKL 256
V ++ M+ + IK D+ Y + + + + G+ + +MRE G + + N +I L
Sbjct: 144 VVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHL 203
Query: 257 LCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE---ILGLFDRMIESGIRPK 313
L ++G REA + M +G P + T+ K R+ + L + M G++P
Sbjct: 204 LLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPN 263
Query: 314 MDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDE 373
+ TY + +R GR G + + K+ME+ GC PD Y L+DAL G LD A +
Sbjct: 264 IYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFV 323
Query: 374 EMFAKGLSAKP 384
+M K S KP
Sbjct: 324 KM--KASSHKP 332
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 189/428 (44%), Gaps = 85/428 (19%)
Query: 31 TDTYNSVIDILGKFFEFDLSWN--LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
T T+N++I G F E +S L+ RM +N P+ T+ + + + A+
Sbjct: 158 TTTFNTLIK--GLFLEGKVSEAVVLVDRMVENGCQ-PDVVTYNSIVNGICRSGDTSLALD 214
Query: 89 TFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
K++E +K +V +Y ++D+LC I+A F E + G V YN
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCR-DGCIDAAISLFKEMETKGIKSSVV-----TYNS 268
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++RG K W ++M R +V ++ ++++ +D+ K GK +A +LYKEM +G
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 208 IKMDVVAYNT-----------------------------------VIRAVGVSEGVDFAM 232
I +++ YNT +I+ + + VD M
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 233 RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---- 288
+V+R + + G + VT + +++ C++G+++ A + EM G +PDV+TY
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 289 ------------FRCLEKPREILG--LFDRMIES--------------------GIRPKM 314
F L+K + LG ++ +IE G++P +
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508
Query: 315 DTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
TY +++ + G L ++ +KMEE G +P++ YN L+ A + G L + K EE
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568
Query: 375 MFAKGLSA 382
M + G SA
Sbjct: 569 MKSCGFSA 576
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 174/379 (45%), Gaps = 18/379 (4%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A+ F +ET + TYNS++ L K +++ L+ M +PN TF ++
Sbjct: 247 AISLFKEMETK-GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-EIVPNVITFNVL 304
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVG 132
+V + EA + ++ G+ + +Y L+D C + EA + +N
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
+V + +++G+ + + + + KRG+V + +YSI + C+SGK
Sbjct: 365 SPDIVT------FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 418
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
A +L++EM G+ DV+ Y ++ + + ++ A+ ++ ++++ +V T
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESG 309
+I+ +C+ G+V +A+ + +P KG P+V+TY L K E L +M E G
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
P TY L+R R G L + ++M+ G S D + ++D L+ M R
Sbjct: 539 NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSA----MKR 594
Query: 370 KYDEEMFAKGLSAKPREEL 388
+KG +K R++L
Sbjct: 595 LTLRYCLSKG--SKSRQDL 611
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 132/276 (47%), Gaps = 19/276 (6%)
Query: 109 DALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM 168
DA+ ++ +I ++ L + + FS + +TK +N++L +F +++
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIA---RTKQFNLVL-------------DFCKQL 114
Query: 169 DKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV 228
+ G+ ++++ +I ++ C+ K A + ++ K G + D +NT+I+ + + V
Sbjct: 115 ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKV 174
Query: 229 DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
A+ + M E GCQP VVT N+++ +C +G A +L +M ++ DV TY
Sbjct: 175 SEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTI 234
Query: 289 FRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
L + I + LF M GI+ + TY L+R + G ++ K M
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
P+ +N L+D + +G L A + +EM +G+S
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 75/186 (40%), Gaps = 36/186 (19%)
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
K A+ L++EM + +V ++ A+ ++ + + +++ G ++ T N
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIR 311
+I C + AY+VL ++ K G PD T++ + GLF
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIK---------GLF--------- 169
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG----MLDM 367
G + V+ +M E GC PD YN++V+ + G LD+
Sbjct: 170 --------------LEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 368 ARKYDE 373
RK +E
Sbjct: 216 LRKMEE 221
>gi|414872586|tpg|DAA51143.1| TPA: empty pericarp4 [Zea mays]
Length = 595
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 127/273 (46%), Gaps = 10/273 (3%)
Query: 116 HVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVK 175
HV+ A++L + S + Y +L GW + + + M V
Sbjct: 170 HVLTAEQLVEELQPRLPLS-------LRHYTALLYGWCRQGKLDEAKHVLARMKAADVAL 222
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
D+ ++ + G+ A +L +M+++G + V+Y T+I+ +G VD AMRV+
Sbjct: 223 DVVVFNTLLAGFVAEGRFEDAFELAGQMEQRGCPPNAVSYTTLIQGLGARGRVDEAMRVF 282
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP 295
EMR GC P VT T++ C+ G++ + Y L M + G D YH FF EK
Sbjct: 283 VEMRRKGCAPDAVTYGTLVNTFCKAGKISQGYEFLDAMSRDGLRVDAAVYHGFFVAHEKK 342
Query: 296 REI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
++ L L +RM E P + Y +++R R G + +W +ME G SP +
Sbjct: 343 EQLEECLELMERMRECRCPPDLKIYNVVIRLACRLGETKQAMTLWNEMESAGLSPVVDTF 402
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
+V L+ +G+L A Y ++M +GL P+
Sbjct: 403 AIVVSGLVGQGLLIEACSYFKDMVGRGLFVVPQ 435
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 113/283 (39%), Gaps = 40/283 (14%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL 123
PN ++ + + V+EAM F ++ G D V+Y LV+ C+ + + E
Sbjct: 257 PNAVSYTTLIQGLGARGRVDEAMRVFVEMRRKGCAPDAVTYGTLVNTFCKAGKISQGYEF 316
Query: 124 C-------------------FGENKNVGFSGLVEMNK----------TKIYNMILRGWFK 154
K +E+ + KIYN+++R +
Sbjct: 317 LDAMSRDGLRVDAAVYHGFFVAHEKKEQLEECLELMERMRECRCPPDLKIYNVVIRLACR 376
Query: 155 MSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVA 214
+ + W EM+ G+ + +++I + + G +A +K+M +G+ + V
Sbjct: 377 LGETKQAMTLWNEMESAGLSPVVDTFAIVVSGLVGQGLLIEACSYFKDMVGRGLFV-VPQ 435
Query: 215 YNTV---IRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
Y + + A+ E ++ A V++ + GC+ +V I L V+EA
Sbjct: 436 YGVLKDLLNALVRDEKLELAKDVWKCIVSKGCELNVSAWTIWIHALFAKKHVKEACLYCL 495
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKM 314
+M + G +P T+ + L+K L++R I + I K+
Sbjct: 496 DMLEAGLMPQPDTFAKLMKGLKK------LYNRQIAAEITEKV 532
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 149/323 (46%), Gaps = 16/323 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQEL 123
P+H F I+ Y +V+EAM F+K+ + GL V+Y ++DALC V +A
Sbjct: 344 PDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMS- 402
Query: 124 CFGENKNVGFSGLVEMNKTK---IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
F L+ T ++ ++ G W K E EM RG+ + +
Sbjct: 403 --------QFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFF 454
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ ++ +CK G +A ++ M + ++ DV+ Y T+I + VD A ++ M
Sbjct: 455 NTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVL 514
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG 300
G +P+ VT NT+I C+NGR+ +A ++ +M KG P ++ Y L + R I
Sbjct: 515 DGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAA 574
Query: 301 ---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
L+ MI+ GI+ + TY ++L+ + ++ + + +N ++D
Sbjct: 575 AKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMID 634
Query: 358 ALIDKGMLDMARKYDEEMFAKGL 380
AL+ G D A+ + A+GL
Sbjct: 635 ALLKGGRHDEAKDLFASLLARGL 657
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 131/287 (45%), Gaps = 12/287 (4%)
Query: 102 VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKC 161
+++ L+ LC K +A ++ +G + YN++L+G + +
Sbjct: 132 ITFSPLLKGLCHDKRTSDAMDIALRRMPALGCT-----PNAFSYNILLKGLCDENRSQQA 186
Query: 162 REFWEEM---DKRG-VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
M D RG D+ SY+ ++ + + G+ KA L+ EM +G+ + + YN
Sbjct: 187 LHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNC 246
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
++ S A+ ++R+M G +P VVT NT++ LC+NGR EA V M KKG
Sbjct: 247 LLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKG 306
Query: 278 CVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
PD Y ++ L D M+ +G +P + +L+ + + G +
Sbjct: 307 HKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAM 366
Query: 335 VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ + KM + G P+ Y ++DAL G +D A + + ++GL+
Sbjct: 367 LAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLT 413
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 164/356 (46%), Gaps = 17/356 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+Y +VI+ L + + D ++ L M D S PN T+ + Y ++ EA+G F K
Sbjct: 208 SYTTVINGLLREGQLDKAYCLFDEMLDQGMS-PNCITYNCLLHGYCSSGKPKEAIGIFRK 266
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK---TKIYNMI 148
+ G++ D V+Y L+ LC+ +EA+++ F +V+ + IY +
Sbjct: 267 MCRDGVEPDVVTYNTLMVYLCKNGRSMEARKV---------FDSMVKKGHKPDSSIYGTL 317
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
L G+ + + + + M + G D + ++I + K G +A+ + +M+++G+
Sbjct: 318 LHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGL 377
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
++V Y TV+ A+ VD AM + + G P+ V T+I LC + +A
Sbjct: 378 HPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEE 437
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFG 325
+ EM +G P+ I ++ L K + +FD M+ ++ + TY L+ +
Sbjct: 438 LAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYC 497
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G + + + M G P+E YN +++ G ++ A +M +KG++
Sbjct: 498 LDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVN 553
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 148/377 (39%), Gaps = 57/377 (15%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKL---DEFG--LKDEVSYCNLVDALCEYKHVIE 119
PN ++ I+ K + +A+ + + D G D VSY +++ L + +
Sbjct: 165 PNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDK 224
Query: 120 AQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
A L F E + G S YN +L G+ + + +M + GV D+ +
Sbjct: 225 AYCL-FDEMLDQGMS-----PNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVT 278
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA---------------VGV 224
Y+ M +CK+G+ +A K++ M KKG K D Y T++ V V
Sbjct: 279 YNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMV 338
Query: 225 SEG--------------------VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
G VD AM + +MR+ G P++VT TV+ LC G+V
Sbjct: 339 RNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVD 398
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL------EKPREILGLFDRMIESGIRPKMDTYV 318
+A + + +G P+ + + L +K E L MI GI P +
Sbjct: 399 DAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEE---LAVEMIGRGICPNTIFFN 455
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
LL + G + ++ M + D Y L+D G +D A K E M
Sbjct: 456 TLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLD 515
Query: 379 GLSAKPREELGTKLVQG 395
G+ KP E ++ G
Sbjct: 516 GV--KPNEVTYNTIING 530
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 81/206 (39%), Gaps = 31/206 (15%)
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
P A+ L+ M + D+ Y+ VI + +D A + G +T +
Sbjct: 80 SPAVALSLFNRMPRA----DLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFS 135
Query: 252 TVIKLLCENGRVREAYAV-LAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIE 307
++K LC + R +A + L MP GC P+ +Y+ + L + ++ L L M+
Sbjct: 136 PLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMA 195
Query: 308 SGIR----PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
R P + +Y ++ R G L + ++ D ++D+G
Sbjct: 196 DDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLF-------------------DEMLDQG 236
Query: 364 MLDMARKYDEEMFAKGLSAKPREELG 389
M Y+ + S KP+E +G
Sbjct: 237 MSPNCITYNCLLHGYCSSGKPKEAIG 262
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 97/215 (45%), Gaps = 9/215 (4%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE 127
T+ + Y V+EA + G+K +EV+Y +++ C+ + +A L F +
Sbjct: 488 TYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSL-FRQ 546
Query: 128 NKNVGFS-GLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
+ G + G+V IY+ IL G F+ +E + M K G+ + +Y+I +
Sbjct: 547 MASKGVNPGIV------IYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQG 600
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+C++ A++++ + + +N +I A+ D A ++ + G P+
Sbjct: 601 LCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPN 660
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
VVT ++K L E G + E + + K GC D
Sbjct: 661 VVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTAD 695
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 184/416 (44%), Gaps = 52/416 (12%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM----------KDNP 61
++A+E F + + T ++NSV++++ + L HR K N
Sbjct: 116 EKAIELFGRMVDEFQCRRTVRSFNSVLNVI-------IQEGLFHRALEFYECGVGGKTNI 168
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEA 120
S PN +F ++ K LV+ A+ F ++ + +V +YC L+D LC+ + EA
Sbjct: 169 S--PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEA 226
Query: 121 QEL--------CFGENK--NVGFSGLVE----MNKTKI---------------YNMILRG 151
L CF + NV +GL + + TK+ YN I+ G
Sbjct: 227 VLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIING 286
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + M V + +Y ++ + K G+ V L ++++G +
Sbjct: 287 LCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHAN 346
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
AY+T+I + E + AM ++++M E GCQP++V + +I LC G++ EA +L
Sbjct: 347 EYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILC 406
Query: 272 EMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM KGC P+ TY + K ++ + ++ M ++ P Y +L+ G
Sbjct: 407 EMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDG 466
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
LR ++W M G PD AY++++ L + G +++ K EM + ++P
Sbjct: 467 KLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQP 522
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 180/436 (41%), Gaps = 84/436 (19%)
Query: 1 RETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDN 60
+ TLS Y +D + F + T+ S+I+ +F + + RMK
Sbjct: 34 KTTLSPYESDAPIPDQIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMK-R 92
Query: 61 PSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL-DEFGLKDEVSYCNLVDALCEYKHVIE 119
+ F ++F+ Y AHL +A+ F ++ DEF + V
Sbjct: 93 ERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTV----------------- 135
Query: 120 AQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE--EMDKRGVVKDL 177
+ +N +L + + + EF+E K + ++
Sbjct: 136 -----------------------RSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNV 172
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
S+++ + MCK G +A+++++EM + + DV Y T++ + + +D A+ + E
Sbjct: 173 LSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDE 232
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-K 294
M+ GC PS VT N +I LC+ G + ++ M KGCVP+ +TY+ CL+ K
Sbjct: 233 MQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGK 292
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG-------------------------- 328
+ + L DRM+ S P TY L+ + G
Sbjct: 293 LDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYST 352
Query: 329 FLRPVFV---------VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ +F +WKKM E GC P+ Y+AL+D L +G LD A++ EM KG
Sbjct: 353 LISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKG 412
Query: 380 LSAKPREELGTKLVQG 395
+ P + L++G
Sbjct: 413 CT--PNAFTYSSLIKG 426
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 144/308 (46%), Gaps = 18/308 (5%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKL-DEFGLKDEVSYCNLVDALCEYKHVIEAQE 122
+PN T+ + +++A+ +++ + ++V+Y L++ L + ++
Sbjct: 274 VPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVH 333
Query: 123 LCFGENKNVGFSGLVEMNKTK---IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
L S L E Y+ ++ G FK + W++M ++G ++
Sbjct: 334 L---------LSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVV 384
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
YS +D +C+ GK +A ++ EM KG + Y+++I+ + A+RV++EM
Sbjct: 385 YSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMA 444
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI- 298
+ C P+ + + +I LCE+G++REA + M +G PDV+ Y L +
Sbjct: 445 KNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVE 504
Query: 299 --LGLFDRMI--ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
L LF+ M+ ES +P + TY +LLR + + + M + GC+PD N
Sbjct: 505 VGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNI 564
Query: 355 LVDALIDK 362
++AL +K
Sbjct: 565 FLNALREK 572
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 151/328 (46%), Gaps = 16/328 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQ-- 121
PNH F I+ Y V++AM F+K+ + GL D V+Y ++ LC+ V +A
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431
Query: 122 -ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
E E + G +YN ++ W K +E EM RG+ D +
Sbjct: 432 FEQMIDERLSPG---------NIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFF 482
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ +D CK G+ ++ KL+ M + G+K D++ Y+T+I ++ +D A ++ M
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG 300
+G +P VT NT+I C+ R+ +A + EM G PD+ITY+ + L + R
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602
Query: 301 ---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
L+ + ESG + ++ TY ++L + +++ + + +N ++
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPR 385
AL+ G D A+ + A GL R
Sbjct: 663 ALLKVGRNDEAKDLFAALSANGLVPDVR 690
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 155/353 (43%), Gaps = 36/353 (10%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PN T+ I+ A ++ + + G + D +++ L+ LC K +A ++
Sbjct: 89 PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148
Query: 124 CFGENKNVG-----------FSGLVEMNKTK---------------------IYNMILRG 151
+G GL + N+++ Y ++ G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+FK K + EM RG++ ++ +YS + +CK+ KA+++ M K G+ +
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
YN+++ S A+ ++M G +P VVT N+++ LC+NGR EA +
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M K+G P++ TY + E+ GL D M+ +GI P + +L+ + + G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ +V+ KM + G +PD Y ++ L G ++ A +Y E+M + LS
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLS 441
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 172/407 (42%), Gaps = 81/407 (19%)
Query: 50 SWNLIHRMKDNPSSIP-NHATFRIMFKRYVTAHLVNEAMGTFNK-LDEFGLKDEVSYCNL 107
+ L+ M D+ P + ++ + + +++A GT+++ LD L + V+Y ++
Sbjct: 181 ALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSI 240
Query: 108 VDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEE 167
+ ALC+ + + +A E+ KN G+ M + YN I+ G+ + F ++
Sbjct: 241 IAALCKAQAMDKAMEVLTSMVKN----GV--MPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG---- 223
M GV D+ +Y+ MD +CK+G+ +A K++ M K+G+K ++ Y T+++
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 224 -----------VSEG--------------------VDFAMRVYREMREMGCQPSVVTCNT 252
V G VD AM V+ +MR+ G P VT T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCLEKPREIL------- 299
VI +LC++GRV +A +M + P I Y+ C F +K +E++
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 300 -------------------------GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
LFD M+ G++P + TY L+ + G +
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534
Query: 335 VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ M +G PD YN L++ ++ A EM + G+S
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVS 581
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 25/223 (11%)
Query: 173 VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM 232
V +L +Y I + C +G+ + KKG ++D +A+ +++ + + AM
Sbjct: 87 VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146
Query: 233 R-VYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG--CVPDVITYHCFF 289
V R M ++GC P+V + N ++K LC+ R +EA +L MP G C PDV++Y
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206
Query: 290 RCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
K ++ G + M++ GI P + TY ++ + + V M + G
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266
Query: 347 PDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELG 389
P+ YN++V G +P+E +G
Sbjct: 267 PNCRTYNSIVHGYCSSG-------------------QPKEAIG 290
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 166/361 (45%), Gaps = 32/361 (8%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDN--PSSIP-NHATFRIMFKRYVTAHLVNEAMGT 89
TYN V+ + K + W + + D+ IP + T+ + L EA
Sbjct: 213 TYNVVLHVYSKIA---VPWKEVLALVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKV 269
Query: 90 FNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
F+++ G + D+V+ +L+D + + EA G K + G T YN +
Sbjct: 270 FDEMRAAGFEPDKVTLNSLLDVYGKARRYDEA----IGVLKEMEQGGCPPSVVT--YNSL 323
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ + K + + EEM+ +G+ D+ +Y+ + + ++GK A+ Y EM + G
Sbjct: 324 ISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGC 383
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
K ++ YN +I+ GV M V+ E+R G P VVT NT++ + +NG E
Sbjct: 384 KPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSG 443
Query: 269 VLAEMPKKGCVPDVITY----HCFFRCLEKPREILGLFD-------RMIESGIRPKMDTY 317
V EM K G VP+ TY + RC GLFD RMIE+GI P + TY
Sbjct: 444 VFKEMKKSGYVPERDTYVSLISSYSRC--------GLFDQAMEIYKRMIEAGIHPDISTY 495
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
+L R G ++ +ME L PDE +Y++L+ A + LD + E+++A
Sbjct: 496 NAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYA 555
Query: 378 K 378
+
Sbjct: 556 E 556
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 97/216 (44%), Gaps = 4/216 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAV-KLYKEM 203
Y ++ + S + + M GV L +Y++ + + K PWK V L M
Sbjct: 179 YTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLALVDSM 238
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
+K GI +D YNT+I A +V+ EMR G +P VT N+++ + + R
Sbjct: 239 RKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARRY 298
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVML 320
EA VL EM + GC P V+TY+ K E L + M GI P + TY L
Sbjct: 299 DEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTL 358
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
+ R G + + +M GC P+ YNAL+
Sbjct: 359 VSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALI 394
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 88/189 (46%), Gaps = 6/189 (3%)
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV-REAYAV 269
D AY +I A+ + A+ V+R M G P++VT N V+ + + +E A+
Sbjct: 175 DASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLAL 234
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
+ M K G D TY+ C + +E +FD M +G P T LL +G+
Sbjct: 235 VDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGK 294
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPRE 386
V K+ME+ GC P YN+L+ + + G+L+ A + EEM KG+ +P
Sbjct: 295 ARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGI--EPDV 352
Query: 387 ELGTKLVQG 395
T LV G
Sbjct: 353 ITYTTLVSG 361
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/446 (19%), Positives = 171/446 (38%), Gaps = 86/446 (19%)
Query: 11 WKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
+K A + F+ + F T NS++D+ GK +D + ++ M+ P+ T+
Sbjct: 263 YKEAAKVFDEMRA-AGFEPDKVTLNSLLDVYGKARRYDEAIGVLKEMEQG-GCPPSVVTY 320
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDAL------------------ 111
+ YV L+ EA +++ G++ D ++Y LV L
Sbjct: 321 NSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLR 380
Query: 112 -------CEYKHVIEAQE---------LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKM 155
C Y +I+ + F E ++ GF + +N +L + +
Sbjct: 381 NGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGF-----VPDVVTWNTLLAVFGQN 435
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
+ ++EM K G V + +Y + + G +A+++YK M + GI D+ Y
Sbjct: 436 GLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTY 495
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI--------------------- 254
N V+ A+ + A +++ EM + +P ++ ++++
Sbjct: 496 NAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYA 555
Query: 255 -KLLCENGRVREAYAV-------------LAEMPKKGCVPDVITYHCFFRC------LEK 294
++ NG V+ V E+ ++ C D+ + ++K
Sbjct: 556 ERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKK 615
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
EIL L M ES I TY L+ + R G + +++ PD ++YN
Sbjct: 616 VEEILSL---MKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNT 672
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGL 380
++ A KG + A + EM GL
Sbjct: 673 MIYAYGRKGQMKEASRLFSEMKCSGL 698
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 129/296 (43%), Gaps = 34/296 (11%)
Query: 11 WKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
+ +A+E + +E H TYN+V+ L + ++ + L M +N S P+ +
Sbjct: 473 FDQAMEIYKRMIEAGIH--PDISTYNAVLSALARGGRWEQAEKLFAEM-ENLDSRPDELS 529
Query: 70 FRIMFKRYVTAHLVN-----------EAMGTFNKLDEFGLKDEVSYCNLVD---ALCEYK 115
+ + Y A ++ E + + N L + + NL D A E +
Sbjct: 530 YSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELR 589
Query: 116 --------HVIEAQELCFGENKNVG-----FSGLVEMN---KTKIYNMILRGWFKMSWWG 159
+V+ A +G+N V S + E + T YN ++ + ++
Sbjct: 590 RRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCE 649
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
KC E+ D +SY+ + + G+ +A +L+ EMK G+ D+V YN +
Sbjct: 650 KCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTYNIFV 709
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
++ + + A+ + R M GC+P+ T NT+++ C +GR+ + + ++ +P+
Sbjct: 710 KSYVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCSHGRIADGKSFISNLPE 765
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 134/301 (44%), Gaps = 11/301 (3%)
Query: 32 DTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
DTY S+I + FD + + RM + P+ +T+ + +A F
Sbjct: 458 DTYVSLISSYSRCGLFDQAMEIYKRMIEA-GIHPDISTYNAVLSALARGGRWEQAEKLFA 516
Query: 92 KLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
+++ + DE+SY +L+ A K + + + L ++++ ++ +E + + ++L
Sbjct: 517 EMENLDSRPDELSYSSLLHAYANAKKLDKMKSL----SEDI-YAERIESHNGLVKTLVLV 571
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
K++ + + E+ +R D++ + + I K+G K ++ MK+ I +
Sbjct: 572 NS-KVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINL 630
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
YN+++ + + E++ +P + NT+I G+++EA +
Sbjct: 631 STATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLF 690
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
+EM G VPD++TY+ F + E + L M+ G +P TY +L+++
Sbjct: 691 SEMKCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCSH 750
Query: 328 G 328
G
Sbjct: 751 G 751
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/373 (18%), Positives = 145/373 (38%), Gaps = 23/373 (6%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F T+N+++ + G+ D + + + +P T+ + Y L ++A
Sbjct: 418 FVPDVVTWNTLLAVFGQN-GLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQA 476
Query: 87 MGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYN 146
M + ++ E G+ ++S N V + E E F E +N+ S E++ Y+
Sbjct: 477 MEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLD-SRPDELS----YS 531
Query: 147 MILRGWFKMSWWGKCREFWEEM------DKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
+L + K + E++ G+VK L + + K K +
Sbjct: 532 SLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTL------VLVNSKVNNLSDTEKAF 585
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
E++++ +D+ N +I G + V + M+E S T N+++ +
Sbjct: 586 LELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRL 645
Query: 261 GRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTY 317
G + +L E+ PD +Y+ + +E LF M SG+ P + TY
Sbjct: 646 GDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTY 705
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM-- 375
+ ++ + + + M GC P+E YN ++ G + + + +
Sbjct: 706 NIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCSHGRIADGKSFISNLPE 765
Query: 376 FAKGLSAKPREEL 388
G+S + ++ L
Sbjct: 766 LHPGISKREQQRL 778
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 166/382 (43%), Gaps = 55/382 (14%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + + A++ +E D Y+++ID L K + +++L M D P
Sbjct: 126 CKTGETRCAIKLLRMIE-DRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEM-DAREIFP 183
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK----DEVSYCNLVDALCEYKHVIEAQ 121
N T+ + + L + MG F+ L E LK D ++ L+DALC+
Sbjct: 184 NVITYNTLICAFC---LAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKE------- 233
Query: 122 ELCFGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
G+N F +V+M YN+++ G K + EM + +V D
Sbjct: 234 ----GKNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTV 289
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+Y+ +D +CKSG+ A+ L EM +G DVV Y +++ A+ ++ +D A ++ +M
Sbjct: 290 TYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKM 349
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI 298
+E G QP++ T +I LC+ GR++ A + + KGC DV TY L K
Sbjct: 350 KERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKE--- 406
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
G+FD + KME+ GC P+ + ++ +
Sbjct: 407 -GMFDE----------------------------ALAIKSKMEDNGCIPNAVTFEIIIRS 437
Query: 359 LIDKGMLDMARKYDEEMFAKGL 380
L +K D A K EM AKGL
Sbjct: 438 LFEKDENDKAEKLLHEMIAKGL 459
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 114/242 (47%), Gaps = 1/242 (0%)
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
T + +++G K F +++ + + SY ++ +CK+G+ A+KL +
Sbjct: 80 TITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLR 139
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
++ + + +VV Y+ +I + + V+ A +Y EM P+V+T NT+I C G
Sbjct: 140 MIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAG 199
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP-REILGLFDRMIESGIRPKMDTYVML 320
++ A+++L EM K PDV T+ L K + +F M++ G+ P + +Y ++
Sbjct: 200 QLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKNAKQIFHAMVQMGVNPNVYSYNIM 259
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + + + ++M PD YN+L+D L G + A EM +G
Sbjct: 260 INGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQ 319
Query: 381 SA 382
A
Sbjct: 320 PA 321
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 122/274 (44%), Gaps = 40/274 (14%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK------------ 192
+N IL K+ ++ ++MD +G+ ++L + SI ++ C G+
Sbjct: 13 FNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKIL 72
Query: 193 ---------PW----KAVKLYKEMKK----------KGIKMDVVAYNTVIRAVGVSEGVD 229
W K + L E+KK + + + V+Y T++ + +
Sbjct: 73 KLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETR 132
Query: 230 FAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF 289
A+++ R + + +P+VV + +I LC++ V EAY + +EM + P+VITY+
Sbjct: 133 CAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLI 192
Query: 290 RCLEKPREILGLFD---RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
+++G F MI I P + T+ +L+ + G + ++ M ++G +
Sbjct: 193 CAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVN 250
Query: 347 PDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
P+ ++YN +++ L +D A EM K +
Sbjct: 251 PNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNM 284
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 189/428 (44%), Gaps = 85/428 (19%)
Query: 31 TDTYNSVIDILGKFFEFDLSWN--LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
T T+N++I G F E +S L+ RM +N P+ T+ + + + A+
Sbjct: 158 TTTFNTLIK--GLFLEGKVSEAVVLVDRMVENGCQ-PDVVTYNSIVNGICRSGDTSLALD 214
Query: 89 TFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
K++E +K +V +Y ++D+LC I+A F E + G V YN
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCR-DGCIDAAISLFKEMETKGIKSSV-----VTYNS 268
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++RG K W ++M R +V ++ ++++ +D+ K GK +A +LYKEM +G
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 208 IKMDVVAYNT-----------------------------------VIRAVGVSEGVDFAM 232
I +++ YNT +I+ + + VD M
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 233 RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---- 288
+V+R + + G + VT + +++ C++G+++ A + EM G +PDV+TY
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 289 ------------FRCLEKPREILGL--FDRMIES--------------------GIRPKM 314
F L+K + LG+ + +IE G++P +
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508
Query: 315 DTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
TY +++ + G L ++ +KMEE G +P++ YN L+ A + G L + K EE
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568
Query: 375 MFAKGLSA 382
M + G SA
Sbjct: 569 MKSCGFSA 576
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 168/362 (46%), Gaps = 16/362 (4%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A+ F +ET + TYNS++ L K +++ L+ M +PN TF ++
Sbjct: 247 AISLFKEMETK-GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-EIVPNVITFNVL 304
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVG 132
+V + EA + ++ G+ + +Y L+D C + EA + +N
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
+V + +++G+ + + + + KRG+V + +YSI + C+SGK
Sbjct: 365 SPDIVT------FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 418
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
A +L++EM G+ DV+ Y ++ + + ++ A+ ++ ++++ +V T
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESG 309
+I+ +C+ G+V +A+ + +P KG P+V+TY L K E L +M E G
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL----IDKGML 365
P TY L+R R G L + ++M+ G S D + ++D L +DK L
Sbjct: 539 NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSFL 598
Query: 366 DM 367
DM
Sbjct: 599 DM 600
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 132/276 (47%), Gaps = 19/276 (6%)
Query: 109 DALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM 168
DA+ ++ +I ++ L + + FS + +TK +N++L +F +++
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIA---RTKQFNLVL-------------DFCKQL 114
Query: 169 DKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV 228
+ G+ ++++ +I ++ C+ K A + ++ K G + D +NT+I+ + + V
Sbjct: 115 ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKV 174
Query: 229 DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
A+ + M E GCQP VVT N+++ +C +G A +L +M ++ DV TY
Sbjct: 175 SEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTI 234
Query: 289 FRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
L + I + LF M GI+ + TY L+R + G ++ K M
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
P+ +N L+D + +G L A + +EM +G+S
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 75/186 (40%), Gaps = 36/186 (19%)
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
K A+ L++EM + +V ++ A+ ++ + + +++ G ++ T N
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIR 311
+I C + AY+VL ++ K G PD T++ + GLF
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIK---------GLF--------- 169
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG----MLDM 367
G + V+ +M E GC PD YN++V+ + G LD+
Sbjct: 170 --------------LEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 368 ARKYDE 373
RK +E
Sbjct: 216 LRKMEE 221
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 165/363 (45%), Gaps = 18/363 (4%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F T +S+I+ +F L+ R++ I +F ++F+ Y AHL +A
Sbjct: 73 FKLGDSTLSSMIENYANLGDFASVEKLLSRIRLENRVIIER-SFIVVFRAYGKAHLPEKA 131
Query: 87 MGTFNKL-DEFGLKDEV----SYCNLVDALCEYKHVIEAQELCFGENKNVGFS--GLVEM 139
+ F+++ DEF K V S N++ Y +E + N N+ S GL
Sbjct: 132 VDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLS-- 189
Query: 140 NKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKL 199
+N++++ K+ + + E + M ++ + D ++Y MD +CK + +AV L
Sbjct: 190 -----FNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLL 244
Query: 200 YKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCE 259
EM+ +G V YN +I + + ++ M GC P+ VT NT+I LC
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCL 304
Query: 260 NGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDT 316
G++ +A ++L M C+P+ +TY L K R + L M E G R
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHI 364
Query: 317 YVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
Y +L+ + G +WKKM E GC P+ Y+A++D L +G + A++ M
Sbjct: 365 YSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMI 424
Query: 377 AKG 379
+ G
Sbjct: 425 SSG 427
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 167/361 (46%), Gaps = 27/361 (7%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDN---PSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
YN +ID L K + DLS + ++ DN PN T+ + +++A+
Sbjct: 260 YNVLIDGLCK--KGDLSR--VTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLL 315
Query: 91 NKL-DEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
++ + ++V+Y L++ L + + ++ L + G+ +N+ IY++++
Sbjct: 316 ERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEER-GY----RLNQ-HIYSVLI 369
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G FK + W++M ++G ++ YS +D +C+ GKP +A ++ M G
Sbjct: 370 SGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCL 429
Query: 210 MDVVAYNTVIRA---VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
+V Y+++++ G+SE A++V+REM E GC + + +I LC GRV+EA
Sbjct: 430 PNVYTYSSLMKGFFKTGLSEE---AIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEA 486
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMI---ESGIRPKMDTYVML 320
V ++M G PD + Y + L L L+ M+ E +P + TY +L
Sbjct: 487 MMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNIL 546
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG-MLDMARKYDEEMFAKG 379
L + + M + GC PD N ++ L +K + R + EE+ A+
Sbjct: 547 LDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSFLEELVARL 606
Query: 380 L 380
L
Sbjct: 607 L 607
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 299 LGLFDRMIESG----IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
L +D ++ S I P ++ ++++ + GF+ V++ M E C PD + Y
Sbjct: 168 LEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCT 227
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
L+D L + +D A +EM ++G S P
Sbjct: 228 LMDGLCKEERIDEAVLLLDEMQSEGCSPSP 257
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 157/335 (46%), Gaps = 11/335 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN+VI+ L K E D + ++++M D +P+ TF + + + + EA+ +
Sbjct: 339 TYNTVINCLSKNGELDEAKGIVNQMVDR-GCLPDTTTFNTLIVALSSQNRLEEALDLARE 397
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
L GL +V N L++ALC+ L F E K+ G + YN+++
Sbjct: 398 LTVKGLSPDVYTFNILINALCKVGDPHLGIRL-FEEMKSSGCTP-----DEVTYNILIDH 451
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
M G + EM+ G + +Y+ +D +CK + +A +++ +M +GI
Sbjct: 452 LCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRS 511
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V +NT+I + ++ +D A + +M + G QP+ +T N+++ C+ G +++A +L
Sbjct: 512 AVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILE 571
Query: 272 EMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M G DV+TY L K + L L M GIRP Y +++ R
Sbjct: 572 TMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRN 631
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
LR ++++M E+G PD Y + +L G
Sbjct: 632 NLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGG 666
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 155/376 (41%), Gaps = 41/376 (10%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
+D + AL N F ++ Y ++ LG FDL L+ M+ H
Sbjct: 67 SDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRRE-----GHQ 121
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGEN 128
++ + +V E+ + D+ A +L +
Sbjct: 122 VRAVVVRSFV------ESYARLRRFDD------------------------AVDLVLNQL 151
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
N F + T ++N +L + S + EM RG+ D+ + + + +C
Sbjct: 152 DNDTFGVQAD---TVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALC 208
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
++ + AV + +EM G+ D + T+++ ++ A+RV +M E GC P+ V
Sbjct: 209 RAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGV 268
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRM 305
T N +I C+ GRV +A + + G PD +TY+ F L + + L + D M
Sbjct: 269 TVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLM 328
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
++ G P + TY ++ + G L + +M + GC PD +N L+ AL + L
Sbjct: 329 LQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRL 388
Query: 366 DMARKYDEEMFAKGLS 381
+ A E+ KGLS
Sbjct: 389 EEALDLARELTVKGLS 404
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 135/302 (44%), Gaps = 12/302 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N +I+ L K + L L MK + + P+ T+ I+ + + A+ N+
Sbjct: 409 TFNILINALCKVGDPHLGIRLFEEMKSSGCT-PDEVTYNILIDHLCSMGKLGNALDLLNE 467
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
++ G + V+Y ++DALC+ + EA+E+ F + G S +N ++ G
Sbjct: 468 MESNGCPRSTVTYNTIIDALCKKMRIEEAEEV-FDQMDAQGIS-----RSAVTFNTLIDG 521
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K E E+M K G+ + +Y+ + CK G KA + + M G ++D
Sbjct: 522 LCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEID 581
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
VV Y T+I + + A+++ R MR G +P+ N VI+ L +R+A +
Sbjct: 582 VVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFR 641
Query: 272 EMPKKGCVPDVITYHCFFRCLEKP----REILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
EM + G PD +TY FR L + +E M+ G P+ ++ ML
Sbjct: 642 EMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNL 701
Query: 328 GF 329
G
Sbjct: 702 GM 703
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 142/306 (46%), Gaps = 51/306 (16%)
Query: 6 CYANDWKRALEFFNWVETD-CHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C AL+ N +E++ C +T TYN++ID L K +M+
Sbjct: 453 CSMGKLGNALDLLNEMESNGC--PRSTVTYNTIIDALCK------------KMR------ 492
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
+ EA F+++D G+ + V++ L+D LC+ K + +A EL
Sbjct: 493 ------------------IEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATEL 534
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ + GL N T YN IL + K K + E M G D+ +Y
Sbjct: 535 I----EQMVKEGLQPNNIT--YNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTL 588
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
++ +CK+G+ A+KL + M+ KGI+ AYN VI+++ + A+ ++REM E+G
Sbjct: 589 INGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGE 648
Query: 244 QPSVVTCNTVIKLLCE-NGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLF 302
P +T V + LC G ++EA+ L EM KG +P+ + FR L + LG+
Sbjct: 649 PPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSS----FRMLAEGLLNLGMD 704
Query: 303 DRMIES 308
D +I +
Sbjct: 705 DYLISA 710
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 138/324 (42%), Gaps = 20/324 (6%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE- 122
P T ++ Y V +A+G + G + D+V+Y V LC+ HV A +
Sbjct: 265 PTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKV 324
Query: 123 ----LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
L G + +V F+ YN ++ K + + +M RG + D
Sbjct: 325 MDLMLQEGHDPDV-FT----------YNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTT 373
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+++ + + + +A+ L +E+ KG+ DV +N +I A+ +R++ EM
Sbjct: 374 TFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEM 433
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP--- 295
+ GC P VT N +I LC G++ A +L EM GC +TY+ L K
Sbjct: 434 KSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRI 493
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
E +FD+M GI T+ L+ + + + ++M + G P+ YN++
Sbjct: 494 EEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSI 553
Query: 356 VDALIDKGMLDMARKYDEEMFAKG 379
+ +G + A E M A G
Sbjct: 554 LTHYCKQGNIKKAADILETMTANG 577
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 134/282 (47%), Gaps = 10/282 (3%)
Query: 91 NKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
N L G D V SY VDALC+ V EA ++ F E K G + + YN ++
Sbjct: 335 NALKADGYNDNVVSYTAAVDALCQVGRVDEALDV-FDEMKQKGI-----IPQQYSYNSLI 388
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G+ K + + E + M+ G + +++ ++++ KSG+ KA+K Y+ MK KGI
Sbjct: 389 SGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIV 448
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
DVVA N V+ + + + A RV+ E++ MG P +T +IK + EA +
Sbjct: 449 PDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKI 508
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
AEM + C PDV+ + L K E +F + E + P TY LL GR
Sbjct: 509 FAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGR 568
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G ++ V + + M P+ YN ++D L G ++ A
Sbjct: 569 EGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYA 610
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 164/355 (46%), Gaps = 13/355 (3%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKD---NPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
Y +V IL F L +H +++ P S + ++ + + + +++
Sbjct: 660 YATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFA 719
Query: 91 NKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+ GL D++ ++ LC++K + A EL + +N+G S KT YN ++
Sbjct: 720 ENIASSGLLLDDLFLSPIIRHLCKHKEALAAHEL-VKKFENLGVS-----LKTGSYNALI 773
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G E + EM + G D +Y + +D M KS + +K+ +EM KG K
Sbjct: 774 CGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYK 833
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
V YNT+I + S+ +D A+ +Y ++ G P+ T ++ L ++G + +A A+
Sbjct: 834 STYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEAL 893
Query: 270 LAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
EM + GC P+ Y+ +R ++ LF+ M+E G+ P + +Y +++
Sbjct: 894 FDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCA 953
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G L +K++ ++G PD YN L+ L G L+ A +M KG++
Sbjct: 954 DGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIA 1008
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 142/292 (48%), Gaps = 11/292 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+ ++D +GK + + M N + T+ + V + +++EA+ + +
Sbjct: 803 TYHLILDAMGKSMRIEDMLKIQEEMH-NKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQ 861
Query: 93 LDEFGLKD-EVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
L G +Y L+D L + ++ +A+ L F E G E N IYN++L G
Sbjct: 862 LMSEGFSPTPCTYGPLLDGLLKDGNIEDAEAL-FDEMLECG----CEPN-CAIYNILLNG 915
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K E +E M ++G+ D+ SY++ +D +C G+ + +K++ G++ D
Sbjct: 916 YRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPD 975
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
++ YN +I +G S ++ A+ +Y +M + G P++ T N++I L + G+ EA +
Sbjct: 976 LITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYE 1035
Query: 272 EMPKKGCVPDVITYHCFFRCLE---KPREILGLFDRMIESGIRPKMDTYVML 320
E+ KG P+V TY+ R P + RMI G RP TY+ L
Sbjct: 1036 ELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 120/237 (50%), Gaps = 5/237 (2%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M + G+V + ++Y+ + + KSG +A+ +YK M G+ V Y+ ++ A G
Sbjct: 162 MKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRD 221
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
+ + + EM G +P+V + I++L + GR+ EAY +L +M ++GC PDV+T
Sbjct: 222 AETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTV 281
Query: 288 FFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
+ L + + +F +M S +P TY+ LL K G G R V +W ++ G
Sbjct: 282 LIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADG 341
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
+ + +Y A VDAL G +D A +EM KG+ P++ L+ G L ++
Sbjct: 342 YNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGII--PQQYSYNSLISGFLKADR 396
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 96/200 (48%), Gaps = 3/200 (1%)
Query: 173 VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM 232
VV S + +++M G+ +++ M+++ IK +V + TV AVGV G+ A
Sbjct: 97 VVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAP 156
Query: 233 RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
M+E G + T N +I L ++G REA V M G VP V TY
Sbjct: 157 VALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAF 216
Query: 293 EKPRE---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE 349
K R+ ++GL M G+RP + +Y + +R G+ G L + + +KMEE GC PD
Sbjct: 217 GKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDV 276
Query: 350 FAYNALVDALIDKGMLDMAR 369
L+ L D G L A+
Sbjct: 277 VTNTVLIQILCDAGRLADAK 296
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 140/296 (47%), Gaps = 20/296 (6%)
Query: 79 TAHLVNEAMGTFNKL-DEFGLKDE----------VSYCNLVDALCEYKHVIEAQELCFGE 127
T HL+ +AMG ++ D +++E V+Y ++ L + K + EA L + +
Sbjct: 803 TYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYY-Q 861
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
+ GFS Y +L G K ++EM + G + Y+I ++
Sbjct: 862 LMSEGFS-----PTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGY 916
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
+G K +L++ M ++G+ D+ +Y VI + ++ + ++++ +MG +P +
Sbjct: 917 RIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDL 976
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDR 304
+T N +I L ++GR+ EA ++ +M KKG P++ TY+ L K E +++
Sbjct: 977 ITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEE 1036
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
++ G +P + TY L+R + G F + +M GC P+ Y L + ++
Sbjct: 1037 LLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLPNQML 1092
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 156/360 (43%), Gaps = 20/360 (5%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
+ A++ + + D T TY+ ++ GK + + L+ M+ PN ++
Sbjct: 188 REAMDVYKAMAAD-GVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEAR-GVRPNVYSYT 245
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKN 130
I + A + EA K++E G K D V+ L+ LC+ + +A+++ + +
Sbjct: 246 ICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKAS 305
Query: 131 VGFSGLVEMNKTKIYNMILRGWFKMSWWGKCR---EFWEEMDKRGVVKDLHSYSIYMDIM 187
+ ++ + L K G R E W + G ++ SY+ +D +
Sbjct: 306 -------DQKPDRVTYITL--LDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDAL 356
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
C+ G+ +A+ ++ EMK+KGI +YN++I ++ + A+ ++ M G P+
Sbjct: 357 CQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNG 416
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIE 307
T I ++G +A M KG VPDV+ + L K LG+ R+
Sbjct: 417 YTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGR-LGMAKRVFH 475
Query: 308 S----GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
GI P TY M+++ + ++ +M E C+PD A N+L+D L G
Sbjct: 476 ELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAG 535
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/407 (20%), Positives = 179/407 (43%), Gaps = 37/407 (9%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
+ D + E +N ++ D + +Y + +D L + D + ++ MK IP
Sbjct: 324 SGDSRSVSEIWNALKAD-GYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQK-GIIPQQ 381
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKD----EVSYCNL-------VDALCEYK- 115
++ + ++ A N A+ FN ++ G V + N + AL Y+
Sbjct: 382 YSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYEL 441
Query: 116 --------HVIEAQELCFGENKN--VGFSGLV--EMNKTKI------YNMILRGWFKMSW 157
V+ + +G K +G + V E+ I Y M+++ K S
Sbjct: 442 MKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASN 501
Query: 158 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
+ + + EM + D+ + + +D++ K+G+ +A K++ E+K+ ++ YNT
Sbjct: 502 ADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNT 561
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
++ +G V M++ M P+++T NTV+ LC+NG V A +L M G
Sbjct: 562 LLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNG 621
Query: 278 CVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR-PV 333
C+PD+ +Y+ L ++ E +F +M + + P T +L F R G ++ +
Sbjct: 622 CMPDLSSYNTVMYGLVKEDRLDEAFWMFCQM-KKVLAPDYATVCTILPSFVRSGLMKEAL 680
Query: 334 FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
V + + + D + ++L++ ++ + + + ++ E + + GL
Sbjct: 681 HTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGL 727
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 95/453 (20%), Positives = 163/453 (35%), Gaps = 95/453 (20%)
Query: 5 SCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDIL---GKFFEFDLSWNLIHR----- 56
S A D + ALE F V HTT++ N +++++ G+ + ++L+ R
Sbjct: 75 SAAAADPEEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKA 134
Query: 57 -----------------MKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK 99
++ P ++P I+ Y T+N L F +K
Sbjct: 135 NVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAY-----------TYNGLIYFLVK 183
Query: 100 D-------EVSYCNLVDALCEYKHVIEAQELCFGENKN----VGFSGLVEMNKTKI---- 144
+V D + L FG+ ++ VG G +E +
Sbjct: 184 SGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYS 243
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y + +R + + +M++ G D+ + ++ + I+C +G+ A ++ +MK
Sbjct: 244 YTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMK 303
Query: 205 KKGIKMDVVAYNTVIRAVG-------VSE----------------------------GVD 229
K D V Y T++ G VSE VD
Sbjct: 304 ASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVD 363
Query: 230 FAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF 289
A+ V+ EM++ G P + N++I + R A + M G P+ T+ F
Sbjct: 364 EALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFI 423
Query: 290 RCLEKPREILGLFDR---MIESGIRPKM---DTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
K E L R M GI P + + + L K GR G + VF +++ +
Sbjct: 424 NYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVF---HELKAM 480
Query: 344 GCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
G SPD Y ++ D A K EM
Sbjct: 481 GISPDNITYTMMIKCCSKASNADEAMKIFAEMI 513
>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 804
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 156/346 (45%), Gaps = 44/346 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
++N +ID+L K F+L W ++ +K SI A F ++ + Y ++ +A+ +F
Sbjct: 93 SHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADA-FTVLIQAYAKMDMIEKAVESFEM 151
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ +F K +V N V HV+ +E V + IYN +L
Sbjct: 152 MKDFDCKPDVFTYNTV------LHVMVRKE--------------VVLLALGIYNRML--- 188
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K + ++ ++SI +D MCKSGK A++++ EM ++ I +
Sbjct: 189 -----------------KLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNK 231
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
+ Y +I + ++ D A R++ M++ GC P VT N ++ C+ GRV EA +L
Sbjct: 232 ITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKY 291
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREILGL---FDRMIESGIRPKMDTYVMLLRKFGRWGF 329
K V D Y C L + R + +M E I+P + Y ++++ + G
Sbjct: 292 FEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGK 351
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
+ + +M E G PD YNAL+ D G+LD A+ E+
Sbjct: 352 FKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEI 397
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 163/377 (43%), Gaps = 33/377 (8%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + + AL+ F+ + T TY +I L + + D+++ L MKD+ IP
Sbjct: 207 CKSGKTQNALQMFDEM-TQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDH-GCIP 264
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKL--DEFGLKDEVSYCNLVDALCEYKHVIEAQEL 123
+ T+ + + V+EA+G D + L D+ Y L+D L + +AQ
Sbjct: 265 DSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVL-DKQGYSCLIDGLFRARRFEDAQ-- 321
Query: 124 CFGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
V + + E N +Y ++++G K + EM +RG+V D H Y
Sbjct: 322 -------VWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCY 374
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ + C G +A L+ E+ K Y +I + S V A +++ EM +
Sbjct: 375 NALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEK 434
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP-----------KKGC--VPDVITYHC 287
GC PSVVT N +I C+ G + +A + +M +G V D +
Sbjct: 435 HGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQT 494
Query: 288 FFRCLEKPREILGLFD---RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
L IL ++ ++ +SG P + TY +L+ F + G + F ++K+++ G
Sbjct: 495 MVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKG 554
Query: 345 CSPDEFAYNALVDALID 361
SPD Y L++ L+
Sbjct: 555 LSPDSVTYGTLINGLLS 571
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 160/358 (44%), Gaps = 31/358 (8%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQE 122
+PN T+ I+ A + A F + + G + D V+Y L+ C+ V EA
Sbjct: 228 LPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALG 287
Query: 123 LC--FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
L F +++ V ++K Y+ ++ G F+ + + ++ +M + + D+ Y
Sbjct: 288 LLKYFEKDRYV-------LDKQG-YSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILY 339
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+I M + K+GK A++L EM ++G+ D YN +I+ +D A ++ E+ +
Sbjct: 340 TIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISK 399
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCLEK 294
C S T +I +C +G V +A + EM K GC P V+T++ C +EK
Sbjct: 400 NDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEK 459
Query: 295 PREIL---------GLFDRMIESGIRPKMDTYVM--LLRKFGRWGFLRPVFVVWKKMEEL 343
+ + LF R+ G +DT + ++ + G + + + ++ +
Sbjct: 460 AQLLFYKMEIGRNPSLFLRL-SQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDS 518
Query: 344 GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
G +P+ YN L+ G ++ A K +E+ KGLS P L+ G L +
Sbjct: 519 GFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLS--PDSVTYGTLINGLLSANR 574
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 126/332 (37%), Gaps = 57/332 (17%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C AL + E D + Y+ +ID L + F+ + +M ++ P
Sbjct: 277 CKLGRVDEALGLLKYFEKD-RYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIK-P 334
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELC 124
+ + IM K A +A+ N++ E GL D Y L+ C+ + EA+ L
Sbjct: 335 DVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLH 394
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+KN FS Y +++ G + G ++ + EM+K G + +++ +
Sbjct: 395 LEISKNDCFSSACT------YTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALI 448
Query: 185 DIMCKSGKPWKAVKLYKEMK---------------------------------------- 204
D CK+G KA L+ +M+
Sbjct: 449 DGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKA 508
Query: 205 --------KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKL 256
G +++ YN +I + ++ A ++++E++ G P VT T+I
Sbjct: 509 YNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLING 568
Query: 257 LCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
L R +A+ VL ++ K GC P Y F
Sbjct: 569 LLSANREEDAFTVLDQILKNGCTPITEVYKSF 600
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 114/270 (42%), Gaps = 10/270 (3%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A +K AL N + T+ T YN++I D + +L + N +
Sbjct: 349 AGKFKDALRLLNEM-TERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKN-DCFSSA 406
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCF- 125
T+ I+ + LV +A FN++++ G V++ L+D C+ ++ +AQ L +
Sbjct: 407 CTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYK 466
Query: 126 ---GENKNVGF---SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
G N ++ G + T ++ K ++ G ++ +
Sbjct: 467 MEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIIT 526
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y+I + CK+G A KL+KE++ KG+ D V Y T+I + + + A V ++
Sbjct: 527 YNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQIL 586
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
+ GC P + + C ++ A+++
Sbjct: 587 KNGCTPITEVYKSFMTWSCRRNKITLAFSL 616
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/161 (19%), Positives = 70/161 (43%), Gaps = 3/161 (1%)
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V++N +I + G + +V +E++ G S +I+ + + +A
Sbjct: 92 VSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEM 151
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M C PDV TY+ + + + LG+++RM++ P + T+ +L+ + G
Sbjct: 152 MKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGK 211
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
+ ++ +M + P++ Y ++ L D+A +
Sbjct: 212 TQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYR 252
>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
Length = 844
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 158/342 (46%), Gaps = 21/342 (6%)
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQ 121
S P T+ I+ Y H + + +L + GL D+ SY +L+ + V +A
Sbjct: 172 SPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAH 230
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
L F E G + K I N I++ KM K ++M G+ DL +YS
Sbjct: 231 CL-FLEMMEQGV-----LPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYS 284
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+ +D +CKS KA ++ ++M + G + + + YN++I +S + ++RV+++M
Sbjct: 285 LIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSC 344
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--------CLE 293
G P+V CN+ I L ++GR EA + M KG PD+I+Y CL
Sbjct: 345 GVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLA 404
Query: 294 KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
++ +F+ M+ GI P + +L+ + R G + ++++ M+ G PD +
Sbjct: 405 ---DVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFA 461
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
++ +L G LD A M G+ P E + L+QG
Sbjct: 462 TVISSLCRIGRLDDALHKFNHMVDIGV--PPSEAVYGCLIQG 501
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 171/372 (45%), Gaps = 20/372 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+ +ID L K D + ++ +M + + PN T+ + Y + + NE++ F +
Sbjct: 282 TYSLIIDGLCKSKAMDKAERVLEQMVE-AGTRPNSITYNSLIHGYSISGMWNESVRVFKQ 340
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI--YNMIL 149
+ G+ V CN + AL ++ EA+ C + S +++ K I Y+ +L
Sbjct: 341 MSSCGVIPTVDNCNSFIHALFKHGRTNEAK--CIFD------SMVLKGPKPDIISYSTML 392
Query: 150 RGWFKM--SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
G+ S + M +G+ + H ++I ++ + G KA+ ++++M+ KG
Sbjct: 393 HGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKG 452
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ D V + TVI ++ +D A+ + M ++G PS +I+ C +G + +A
Sbjct: 453 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAK 512
Query: 268 AVLAEMPKKGCVPDVITYHCFF---RCLE-KPREILGLFDRMIESGIRPKMDTYVMLLRK 323
+++EM K P + Y C E + E + D M+++G RP + T+ L+
Sbjct: 513 ELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEG 572
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAK 383
+ G + F + M +G P+ + Y LVD G +D A +M KG+ K
Sbjct: 573 YCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGV--K 630
Query: 384 PREELGTKLVQG 395
P L + ++ G
Sbjct: 631 PTSVLYSIILHG 642
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 147/354 (41%), Gaps = 36/354 (10%)
Query: 53 LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDAL 111
LI N IP+ TF + +++A+ FN + + G+ E Y L+
Sbjct: 443 LIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGC 502
Query: 112 CEYKHVIEAQELCFGE--NKNVG------FSGLV-----------------------EMN 140
C + +++A+EL E NK++ FS ++ +
Sbjct: 503 CNHGELVKAKEL-ISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRP 561
Query: 141 KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
+N ++ G+ + + + M G+ + + Y +D CK+G+ A+ ++
Sbjct: 562 NVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVF 621
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
++M KG+K V Y+ ++ + + A +++ EM E G S+ T V+ LC N
Sbjct: 622 RDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRN 681
Query: 261 GRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTY 317
EA +L ++ D+IT++ + K +E LFD + G+ P + TY
Sbjct: 682 NCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTY 741
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
M++ + ++ +E+ G + D N +V L++K + A Y
Sbjct: 742 SMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNY 795
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 170/375 (45%), Gaps = 17/375 (4%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSIPNHATFRIMFKRYVTAHLVNE 85
F+ T TYN +I L + DL+ +++++ DN P T+ I+ + + V+E
Sbjct: 189 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQ--PTVITYTILIEATMLEGGVDE 246
Query: 86 AMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI 144
A+ +++ GLK D +Y ++ +C+ V A E+ +N+ G
Sbjct: 247 ALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMV----RNLELKG--SEPDVIS 300
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN++LR W + + +M ++ +YSI + +C+ GK +A+ L K MK
Sbjct: 301 YNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMK 360
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+KG+ D +Y+ +I A +D A+ M GC P +V NTV+ LC+NG+
Sbjct: 361 EKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKAD 420
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL----EKPREILGLFDRMIESGIRPKMDTYVML 320
+A + ++ + GC P+ +Y+ F L +K R L + M+ +GI P TY +
Sbjct: 421 QALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA-LHMILEMMSNGIDPDEITYNSM 479
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ R G + F + M P YN ++ ++ A E M G
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG- 538
Query: 381 SAKPREELGTKLVQG 395
+P E T L++G
Sbjct: 539 -CRPNETTYTVLIEG 552
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 119/238 (50%), Gaps = 3/238 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G+ KM+ + M + D +Y+I + +C GK A+K+ ++
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+ V+ Y +I A + GVD A+++ EM G +P + T NT+I+ +C+ G V
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLL 321
A+ ++ + KG PDVI+Y+ R L K E L +M P + TY +L+
Sbjct: 281 RAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R G + + K M+E G +PD ++Y+ L+ A +G LD+A ++ E M + G
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 97/228 (42%), Gaps = 37/228 (16%)
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVV---------------------------------- 213
C+SG +++ L + M +KG DV+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
AYN +I +D A RV MR P VT N +I LC G++ A VL ++
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 274 PKKGCVPDVITYHCFFRC--LEKP-REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
C P VITY LE E L L D M+ G++P M TY ++R + G +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
F + + +E G PD +YN L+ AL+++G + K +MF++
Sbjct: 280 DRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327
>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
Length = 864
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 158/342 (46%), Gaps = 21/342 (6%)
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQ 121
S P T+ I+ Y H + + +L + GL D+ SY +L+ + V +A
Sbjct: 152 SPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAH 210
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
L F E G + K I N I++ KM K ++M G+ DL +YS
Sbjct: 211 CL-FLEMMEQGV-----LPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYS 264
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+ +D +CKS KA ++ ++M + G + + + YN++I +S + ++RV+++M
Sbjct: 265 LIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSC 324
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--------CLE 293
G P+V CN+ I L ++GR EA + M KG PD+I+Y CL
Sbjct: 325 GVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLA 384
Query: 294 KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
++ +F+ M+ GI P + +L+ + R G + ++++ M+ G PD +
Sbjct: 385 ---DVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFA 441
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
++ +L G LD A M G+ P E + L+QG
Sbjct: 442 TVISSLCRIGRLDDALHKFNHMVDIGV--PPSEAVYGCLIQG 481
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 171/372 (45%), Gaps = 20/372 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+ +ID L K D + ++ +M + + PN T+ + Y + + NE++ F +
Sbjct: 262 TYSLIIDGLCKSKAMDKAERVLEQMVE-AGTRPNSITYNSLIHGYSISGMWNESVRVFKQ 320
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI--YNMIL 149
+ G+ V CN + AL ++ EA+ C + S +++ K I Y+ +L
Sbjct: 321 MSSCGVIPTVDNCNSFIHALFKHGRTNEAK--CIFD------SMVLKGPKPDIISYSTML 372
Query: 150 RGWFKM--SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
G+ S + M +G+ + H ++I ++ + G KA+ ++++M+ KG
Sbjct: 373 HGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKG 432
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ D V + TVI ++ +D A+ + M ++G PS +I+ C +G + +A
Sbjct: 433 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAK 492
Query: 268 AVLAEMPKKGCVPDVITYHCFF---RCLE-KPREILGLFDRMIESGIRPKMDTYVMLLRK 323
+++EM K P + Y C E + E + D M+++G RP + T+ L+
Sbjct: 493 ELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEG 552
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAK 383
+ G + F + M +G P+ + Y LVD G +D A +M KG+ K
Sbjct: 553 YCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGV--K 610
Query: 384 PREELGTKLVQG 395
P L + ++ G
Sbjct: 611 PTSVLYSIILHG 622
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 147/354 (41%), Gaps = 36/354 (10%)
Query: 53 LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDAL 111
LI N IP+ TF + +++A+ FN + + G+ E Y L+
Sbjct: 423 LIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGC 482
Query: 112 CEYKHVIEAQELCFGE--NKNVG------FSGLV-----------------------EMN 140
C + +++A+EL E NK++ FS ++ +
Sbjct: 483 CNHGELVKAKEL-ISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRP 541
Query: 141 KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
+N ++ G+ + + + M G+ + + Y +D CK+G+ A+ ++
Sbjct: 542 NVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVF 601
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
++M KG+K V Y+ ++ + + A +++ EM E G S+ T V+ LC N
Sbjct: 602 RDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRN 661
Query: 261 GRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTY 317
EA +L ++ D+IT++ + K +E LFD + G+ P + TY
Sbjct: 662 NCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTY 721
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
M++ + ++ +E+ G + D N +V L++K + A Y
Sbjct: 722 SMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNY 775
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 167/353 (47%), Gaps = 11/353 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS+ID GK + + L+ M+ + + + T+ + + + +A F +
Sbjct: 237 TYNSLIDGYGKCGDLEEVEQLVSEMRKSGCA-ADVVTYNALINCFSKFGRMEKAYSYFGE 295
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G+ + V++ VDA C+ V EA +L F + + G M Y ++ G
Sbjct: 296 MKRQGVVANVVTFSTFVDAFCKEGLVQEAMKL-FAQMRVRGM-----MPNEFTYTSLVDG 349
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K +EM +G+V ++ +Y++ +D +CK GK +A + M++ G+K +
Sbjct: 350 TCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKAN 409
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ Y T+I ++ + A+ + +M+ G + V T+I LC++ +V EA ++L
Sbjct: 410 ELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLH 469
Query: 272 EMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+M G P+ + Y L K E + L ++++SG +P + TY L+ + G
Sbjct: 470 KMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAG 529
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ + KM ELG P+ AY AL+D G L+ A EM KG+S
Sbjct: 530 SISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMS 582
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 121/258 (46%), Gaps = 9/258 (3%)
Query: 141 KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
T+ N IL + G R ++ + V ++ +++I +D +CK G+ +A L+
Sbjct: 168 NTRTCNHILLRLARNRQGGLVRRLFDLLP----VPNVFTFNIVIDFLCKEGELVEARALF 223
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
MK G DVV YN++I G ++ ++ EMR+ GC VVT N +I +
Sbjct: 224 VRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKF 283
Query: 261 GRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTY 317
GR+ +AY+ EM ++G V +V+T+ F K +E + LF +M G+ P TY
Sbjct: 284 GRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTY 343
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
L+ + G L V+ +M G P+ Y +VD L +G + A M
Sbjct: 344 TSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMER 403
Query: 378 KGLSAKPREELGTKLVQG 395
G+ K E L T L+ G
Sbjct: 404 GGV--KANELLYTTLIHG 419
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 151/347 (43%), Gaps = 11/347 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY S++D K D + L+ M + +PN T+ +M V EA +
Sbjct: 342 TYTSLVDGTCKAGRLDDAIVLLDEMV-HQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSL 400
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
++ G+K +E+ Y L+ + A +L + KN G +E++ +Y ++ G
Sbjct: 401 MERGGVKANELLYTTLIHGHFMNNNSERALDL-LNQMKNKG----MELD-VSLYGTLIWG 454
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + + +M G+ + Y+ MD + K+GK +AV L ++ G + +
Sbjct: 455 LCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPN 514
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
VV Y +I + + + A+ + +MRE+G P+V +I C+ G + +A ++
Sbjct: 515 VVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMN 574
Query: 272 EMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM KG D + Y K ++ L +MIESG++ + Y + F
Sbjct: 575 EMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMN 634
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
++ V +M G +PD+ YN L+ G ++ A EM
Sbjct: 635 MMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEM 681
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 148/334 (44%), Gaps = 31/334 (9%)
Query: 33 TYNSVIDIL---GKFFEFDLSWNLIHR--MKDNPSSIPNHATFRIMFKRYVTAHLVNE-- 85
TY ++D L GK E D +L+ R +K N +++ + H +N
Sbjct: 377 TYTVMVDGLCKEGKVAEADNVLSLMERGGVKAN----------ELLYTTLIHGHFMNNNS 426
Query: 86 --AMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKT 142
A+ N++ G++ +VS Y L+ LC+ + V EA+ L +G T
Sbjct: 427 ERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHK------MAGCGLRPNT 480
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
IY I+ FK + ++ G ++ +Y +D +CK+G +A+ + +
Sbjct: 481 VIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNK 540
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M++ G+ +V AY +I ++ AM + EM + G V ++I +
Sbjct: 541 MRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQAN 600
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVM 319
+++A+A+ +M + G D+ Y CF F + +E G+ MI +GI P Y
Sbjct: 601 LQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNC 660
Query: 320 LLRKFGRWGFLRPVFVVWKKMEEL--GCSPDEFA 351
L+RK+ + G + + +ME + C+ D+ A
Sbjct: 661 LIRKYQKLGNMEEASSLQNEMESVLSSCTEDDTA 694
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 126/280 (45%), Gaps = 15/280 (5%)
Query: 107 LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE 166
++D LC+ ++EA+ L F K +G S V YN ++ G+ K + +
Sbjct: 206 VIDFLCKEGELVEARAL-FVRMKAMGCSPDV-----VTYNSLIDGYGKCGDLEEVEQLVS 259
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
EM K G D+ +Y+ ++ K G+ KA + EMK++G+ +VV ++T + A
Sbjct: 260 EMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEG 319
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
V AM+++ +MR G P+ T +++ C+ GR+ +A +L EM +G VP+V+TY
Sbjct: 320 LVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYT 379
Query: 287 CFFRCLEK------PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
L K +L L +R G++ Y L+ + +M
Sbjct: 380 VMVDGLCKEGKVAEADNVLSLMER---GGVKANELLYTTLIHGHFMNNNSERALDLLNQM 436
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ G D Y L+ L +D A+ +M GL
Sbjct: 437 KNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGL 476
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 8/197 (4%)
Query: 25 CHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVN 84
C T Y +++D L K + + L+H++ D+ PN T+ + A ++
Sbjct: 474 CGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQ-PNVVTYCALIDGLCKAGSIS 532
Query: 85 EAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK 143
EA+ FNK+ E GL V +Y L+D C+ + +A L E + G S ++K
Sbjct: 533 EAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHL-MNEMIDKGMS----LDKV- 586
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+Y ++ G+ K + +M + G+ DL+ Y+ ++ C +A + EM
Sbjct: 587 VYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEM 646
Query: 204 KKKGIKMDVVAYNTVIR 220
GI D YN +IR
Sbjct: 647 IGTGITPDKTVYNCLIR 663
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 3/138 (2%)
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDR 304
PSVV +T++ LL ++G + +A LA + + P+ T + L + R+ GL R
Sbjct: 134 PSVV--DTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQG-GLVRR 190
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
+ + P + T+ +++ + G L ++ +M+ +GCSPD YN+L+D G
Sbjct: 191 LFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGD 250
Query: 365 LDMARKYDEEMFAKGLSA 382
L+ + EM G +A
Sbjct: 251 LEEVEQLVSEMRKSGCAA 268
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 134/282 (47%), Gaps = 10/282 (3%)
Query: 91 NKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
N L G D V SY VDALC+ V EA ++ F E K G + + YN ++
Sbjct: 335 NALKADGYNDNVVSYTAAVDALCQVGRVDEALDV-FDEMKQKGI-----IPQQYSYNSLI 388
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G+ K + + E + M+ G + +++ ++++ KSG+ KA+K Y+ MK KGI
Sbjct: 389 SGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIV 448
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
DVVA N V+ + + + A RV+ E++ MG P +T +IK + EA +
Sbjct: 449 PDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKI 508
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
AEM + C PDV+ + L K E +F + E + P TY LL GR
Sbjct: 509 FAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGR 568
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G ++ V + + M P+ YN ++D L G ++ A
Sbjct: 569 EGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYA 610
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 163/355 (45%), Gaps = 13/355 (3%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKD---NPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
Y +V IL F L +H +++ P S + ++ + + + +++
Sbjct: 660 YATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFA 719
Query: 91 NKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+ GL D++ ++ C++K + A EL + +N+G S KT YN ++
Sbjct: 720 ENIASSGLLLDDLFLSPIIRHFCKHKEALAAHEL-VKKFENLGVS-----LKTGSYNALI 773
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G E + EM + G D +Y + +D M KS + +K+ +EM KG K
Sbjct: 774 CGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYK 833
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
V YNT+I + S+ +D A+ +Y ++ G P+ T ++ L ++G + +A A+
Sbjct: 834 STYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEAL 893
Query: 270 LAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
EM + GC P+ Y+ +R ++ LF+ M+E G+ P + +Y +++
Sbjct: 894 FDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCA 953
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G L +K++ ++G PD YN L+ L G L+ A +M KG++
Sbjct: 954 DGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIA 1008
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 142/292 (48%), Gaps = 11/292 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+ ++D +GK + + M N + T+ + V + +++EA+ + +
Sbjct: 803 TYHLILDAMGKSMRIEDMLKIQEEMH-NKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQ 861
Query: 93 LDEFGLKD-EVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
L G +Y L+D L + ++ +A+ L F E G E N IYN++L G
Sbjct: 862 LMSEGFSPTPCTYGPLLDGLLKDGNIEDAEAL-FDEMLECG----CEPN-CAIYNILLNG 915
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K E +E M ++G+ D+ SY++ +D +C G+ + +K++ G++ D
Sbjct: 916 YRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPD 975
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
++ YN +I +G S ++ A+ +Y +M + G P++ T N++I L + G+ EA +
Sbjct: 976 LITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYE 1035
Query: 272 EMPKKGCVPDVITYHCFFRCLE---KPREILGLFDRMIESGIRPKMDTYVML 320
E+ KG P+V TY+ R P + RMI G RP TY+ L
Sbjct: 1036 ELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 120/237 (50%), Gaps = 5/237 (2%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M + G+V + ++Y+ + + KSG +A+ +YK M G+ V Y+ ++ A G
Sbjct: 162 MKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRD 221
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
+ + + EM G +P+V + I++L + GR+ EAY +L +M ++GC PDV+T
Sbjct: 222 AETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTV 281
Query: 288 FFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
+ L + + +F +M S +P TY+ LL K G G R V +W ++ G
Sbjct: 282 LIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADG 341
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
+ + +Y A VDAL G +D A +EM KG+ P++ L+ G L ++
Sbjct: 342 YNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGII--PQQYSYNSLISGFLKADR 396
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 96/200 (48%), Gaps = 3/200 (1%)
Query: 173 VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM 232
VV S + +++M G+ +++ M+++ IK +V + TV AVGV G+ A
Sbjct: 97 VVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAP 156
Query: 233 RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
M+E G + T N +I L ++G REA V M G VP V TY
Sbjct: 157 VALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAF 216
Query: 293 EKPRE---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE 349
K R+ ++GL M G+RP + +Y + +R G+ G L + + +KMEE GC PD
Sbjct: 217 GKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDV 276
Query: 350 FAYNALVDALIDKGMLDMAR 369
L+ L D G L A+
Sbjct: 277 VTNTVLIQILCDAGRLADAK 296
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 140/296 (47%), Gaps = 20/296 (6%)
Query: 79 TAHLVNEAMGTFNKL-DEFGLKDE----------VSYCNLVDALCEYKHVIEAQELCFGE 127
T HL+ +AMG ++ D +++E V+Y ++ L + K + EA L + +
Sbjct: 803 TYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYY-Q 861
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
+ GFS Y +L G K ++EM + G + Y+I ++
Sbjct: 862 LMSEGFS-----PTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGY 916
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
+G K +L++ M ++G+ D+ +Y VI + ++ + ++++ +MG +P +
Sbjct: 917 RIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDL 976
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDR 304
+T N +I L ++GR+ EA ++ +M KKG P++ TY+ L K E +++
Sbjct: 977 ITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEE 1036
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
++ G +P + TY L+R + G F + +M GC P+ Y L + ++
Sbjct: 1037 LLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLPNQML 1092
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 156/360 (43%), Gaps = 20/360 (5%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
+ A++ + + D T TY+ ++ GK + + L+ M+ PN ++
Sbjct: 188 REAMDVYKAMAAD-GVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEAR-GVRPNVYSYT 245
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKN 130
I + A + EA K++E G K D V+ L+ LC+ + +A+++ + +
Sbjct: 246 ICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKAS 305
Query: 131 VGFSGLVEMNKTKIYNMILRGWFKMSWWGKCR---EFWEEMDKRGVVKDLHSYSIYMDIM 187
+ ++ + L K G R E W + G ++ SY+ +D +
Sbjct: 306 -------DQKPDRVTYITL--LDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDAL 356
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
C+ G+ +A+ ++ EMK+KGI +YN++I ++ + A+ ++ M G P+
Sbjct: 357 CQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNG 416
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIE 307
T I ++G +A M KG VPDV+ + L K LG+ R+
Sbjct: 417 YTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGR-LGMAKRVFH 475
Query: 308 S----GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
GI P TY M+++ + ++ +M E C+PD A N+L+D L G
Sbjct: 476 ELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAG 535
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 177/407 (43%), Gaps = 37/407 (9%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
+ D + E +N ++ D + +Y + +D L + D + ++ MK IP
Sbjct: 324 SGDSRSVSEIWNALKAD-GYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQK-GIIPQQ 381
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKD----EVSYCNL-------VDALCEYK- 115
++ + ++ A N A+ FN ++ G V + N + AL Y+
Sbjct: 382 YSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYEL 441
Query: 116 --------HVIEAQELCFGENKN--VGFSGLV--EMNKTKI------YNMILRGWFKMSW 157
V+ + +G K +G + V E+ I Y M+++ K S
Sbjct: 442 MKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASN 501
Query: 158 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
+ + + EM + D+ + + +D++ K+G+ +A K++ E+K+ ++ YNT
Sbjct: 502 ADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNT 561
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
++ +G V M++ M P+++T NTV+ LC+NG V A +L M G
Sbjct: 562 LLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNG 621
Query: 278 CVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
C+PD+ +Y+ L K E +F +M + + P T +L F R G ++
Sbjct: 622 CMPDLSSYNTVMYGLVKEGRLDEAFWMFCQM-KKVLAPDYATVCTILPSFVRSGLMKEAL 680
Query: 335 -VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
V + + + D + ++L++ ++ + + + ++ E + + GL
Sbjct: 681 HTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGL 727
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 95/453 (20%), Positives = 163/453 (35%), Gaps = 95/453 (20%)
Query: 5 SCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDIL---GKFFEFDLSWNLIHR----- 56
S A D + ALE F V HTT++ N +++++ G+ + ++L+ R
Sbjct: 75 SAAAADPEEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKA 134
Query: 57 -----------------MKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK 99
++ P ++P I+ Y T+N L F +K
Sbjct: 135 NVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAY-----------TYNGLIYFLVK 183
Query: 100 D-------EVSYCNLVDALCEYKHVIEAQELCFGENKN----VGFSGLVEMNKTKI---- 144
+V D + L FG+ ++ VG G +E +
Sbjct: 184 SGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYS 243
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y + +R + + +M++ G D+ + ++ + I+C +G+ A ++ +MK
Sbjct: 244 YTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMK 303
Query: 205 KKGIKMDVVAYNTVIRAVG-------VSE----------------------------GVD 229
K D V Y T++ G VSE VD
Sbjct: 304 ASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVD 363
Query: 230 FAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF 289
A+ V+ EM++ G P + N++I + R A + M G P+ T+ F
Sbjct: 364 EALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFI 423
Query: 290 RCLEKPREILGLFDR---MIESGIRPKM---DTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
K E L R M GI P + + + L K GR G + VF +++ +
Sbjct: 424 NYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVF---HELKAM 480
Query: 344 GCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
G SPD Y ++ D A K EM
Sbjct: 481 GISPDNITYTMMIKCCSKASNADEAMKIFAEMI 513
>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 484
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 155/353 (43%), Gaps = 36/353 (10%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PN T+ I+ A ++ + + G + D +++ L+ LC K +A ++
Sbjct: 89 PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148
Query: 124 CFGENKNVG-----------FSGLVEMNKTK---------------------IYNMILRG 151
+G GL + N+++ Y ++ G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+FK K + EM RG++ ++ +YS + +CK+ KA+++ M K G+ +
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
YN+++ S A+ ++M G +P VVT N+++ LC+NGR EA +
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M K+G P++ TY + E+ GL D M+ +GI P + +L+ + + G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ +V+ KM + G +PD Y ++ L G ++ A +Y E+M + LS
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLS 441
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 126/280 (45%), Gaps = 43/280 (15%)
Query: 50 SWNLIHRMKDNPSSIP-NHATFRIMFKRYVTAHLVNEAMGTFNK-LDEFGLKDEVSYCNL 107
+ L+ M D+ P + ++ + + +++A GT+++ LD L + V+Y ++
Sbjct: 181 ALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSI 240
Query: 108 VDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEE 167
+ ALC+ + + +A E+ KN G+ M + YN I+ G+ + F ++
Sbjct: 241 IAALCKAQAMDKAMEVLTSMVKN----GV--MPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M GV D+ +Y+ MD +CK+G+ +A K++ M K+G+K ++ Y T+++
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 228 -----------------------------------VDFAMRVYREMREMGCQPSVVTCNT 252
VD AM V+ +MR+ G P VT T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
VI +LC++GRV +A +M + P I Y+ L
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 25/223 (11%)
Query: 173 VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM 232
V +L +Y I + C +G+ + KKG ++D +A+ +++ + + AM
Sbjct: 87 VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146
Query: 233 R-VYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG--CVPDVITYHCFF 289
V R M ++GC P+V + N ++K LC+ R +EA +L MP G C PDV++Y
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206
Query: 290 RCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
K ++ G + M++ GI P + TY ++ + + V M + G
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266
Query: 347 PDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELG 389
P+ YN++V G +P+E +G
Sbjct: 267 PNCRTYNSIVHGYCSSG-------------------QPKEAIG 290
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 109/227 (48%), Gaps = 8/227 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+S+I L K D + ++ M N +PN T+ + Y ++ EA+G K
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKN-GVMPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G++ D V+Y +L+D LC+ EA+++ F G + Y +L+G
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM-FDSMTKRGLK-----PEITTYGTLLQG 348
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + + M + G+ + + +SI + K GK +A+ ++ +M+++G+ D
Sbjct: 349 YATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPD 408
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
V Y TVI + S V+ AMR + +M + P + N++I LC
Sbjct: 409 TVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 175/355 (49%), Gaps = 18/355 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+ ++I+ K + D + L +M D+ + IPN TF +M + Y + +A +++
Sbjct: 480 TFTALINGFCKDKKMDEAARLFDKMIDS-NVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQ 538
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E GLK D +Y +L+ LC V +A E F + ++ L + T + L G
Sbjct: 539 MVEMGLKPDNYTYRSLISGLCLTSGVSKANE--FVADLENSYAVLNNFSLTAL----LYG 592
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+F+ + + W+EM RGV DL S++I + K K+ L++EMK++G+K D
Sbjct: 593 FFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPD 652
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ Y +I A+ E + A+ + +M G P+ VT +I LC++G + A +
Sbjct: 653 DIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCK 712
Query: 272 EMPKKGCVPDVITYHCFFRC------LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
EM +P+ TY+CF +EK ++ L M++ G + ++ +L++
Sbjct: 713 EMLAGNVLPNKFTYNCFLDYFATEGDMEKAKD---LHSAMLQ-GHLASIVSFNILIKGLC 768
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ G ++ + K+ E G SPD +Y+ ++ L G ++ A + EM KGL
Sbjct: 769 KAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGL 823
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 129/257 (50%), Gaps = 11/257 (4%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE 127
+F I+ + H ++ F ++ E G+K D++ Y ++DAL + +++I+A C+ +
Sbjct: 620 SFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALN-CWDQ 678
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
G+S T + +++ K + G +EM V+ + +Y+ ++D
Sbjct: 679 MVVDGYSP-----NTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYF 733
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
G KA L+ M + G +V++N +I+ + + + A+ + ++ E G P
Sbjct: 734 ATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDC 792
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR---CLEKPREILGLFDR 304
++ +T+I LC+ G + +A+ + EM KG PDV+ Y+ F R + + LG++
Sbjct: 793 ISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTN 852
Query: 305 MIESGIRPKMDTYVMLL 321
MI SG++P DTY LL
Sbjct: 853 MIRSGVQPNWDTYRALL 869
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 5/255 (1%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+Y +R + + R M+ GV Y++ M +CK+ + +AV++ M
Sbjct: 200 VYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVM 259
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
G+ D V Y T++ E ++ A+R+ +M +G PS C+ +I L + V
Sbjct: 260 VNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELV 319
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVML 320
EA+++ ++ G VP+V Y+ L E+ + LF M G+ P TY +L
Sbjct: 320 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAIL 379
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + G + ++ KM + G + YN+L++ +G LD AR M +GL
Sbjct: 380 IHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGL 439
Query: 381 SAKPREELGTKLVQG 395
+ P + L+ G
Sbjct: 440 T--PTAASYSPLIAG 452
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 169/396 (42%), Gaps = 71/396 (17%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T + ++ L K +F L+ +L +M + + + + + Y + ++ A G +
Sbjct: 165 TASQILFSLVKIRQFALARDLFDKMLQSGVHLDEY-VYTAGIRAYCESRNLDGARGLVVR 223
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYN----- 146
++ G+K V Y L+ LC+ V EA E+ N+G + +T +Y
Sbjct: 224 MESEGVKASAVPYNVLMYGLCKNMRVQEAVEV-KNVMVNIGVTADEVTYRTLVYGFCRME 282
Query: 147 ---MILRGWFKMSWWG------KCREFWEEMDKR----------------GVVKDLHSYS 181
M LR M G C +E+ K+ G+V ++ +Y+
Sbjct: 283 ELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYN 342
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+D +CK+ + A +L+KEM +G++ + V Y +I A+ ++ A+ ++ +MR+
Sbjct: 343 ALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDK 402
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF----------RC 291
G + +V N++I C+ G + A +L+ M K+G P +Y C
Sbjct: 403 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSC 462
Query: 292 LEKPREILG----------------------------LFDRMIESGIRPKMDTYVMLLRK 323
+E RE+ LFD+MI+S + P T+ +++
Sbjct: 463 MELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEG 522
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ G +R F ++ +M E+G PD + Y +L+ L
Sbjct: 523 YCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 152/357 (42%), Gaps = 45/357 (12%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+PN + + + ++A F ++ GL+ +EV+Y L+ ALC+ + +IE
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCK-RGMIEDAL 393
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
F + ++ G V YN ++ G+ K + R M K G+ SYS
Sbjct: 394 CLFDKMRDKGIKVTV-----YPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSP 448
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ +C++G ++L++EM ++GI + + +I + +D A R++ +M +
Sbjct: 449 LIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSN 508
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCLEKPR 296
P+ VT N +I+ C G +R+A+ + +M + G PD TY C + K
Sbjct: 509 VIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKAN 568
Query: 297 EILG--------------------------------LFDRMIESGIRPKMDTYVMLLRKF 324
E + L+D M G++ + ++ +++
Sbjct: 569 EFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAA 628
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ V++++M+E G PD+ Y ++DAL + + A ++M G S
Sbjct: 629 LKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYS 685
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/424 (20%), Positives = 166/424 (39%), Gaps = 81/424 (19%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
YN++ID L K FD + L M PN T+ I+ ++ +A+ F+K
Sbjct: 340 AYNALIDKLCKNERFDDADRLFKEMAGRGLE-PNEVTYAILIHALCKRGMIEDALCLFDK 398
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + G+K V Y +L++ C+ + A+ L G K GL + Y+ ++ G
Sbjct: 399 MRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVK----EGLTPTAAS--YSPLIAG 452
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS--------------------- 190
+ C E EM +RG+ + ++++ ++ CK
Sbjct: 453 LCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN 512
Query: 191 --------------GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV-------- 228
G KA +LY +M + G+K D Y ++I + ++ GV
Sbjct: 513 EVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA 572
Query: 229 ----------DFAM-----------------RVYREMREMGCQPSVVTCNTVIKLLCENG 261
+F++ ++ EM G + +V+ ++ +
Sbjct: 573 DLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 632
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYV 318
++ + EM ++G PD I Y C L K + L +D+M+ G P T+
Sbjct: 633 DKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHT 692
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+L+ + G+L ++ K+M P++F YN +D +G ++ A+ M
Sbjct: 693 VLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQG 752
Query: 379 GLSA 382
L++
Sbjct: 753 HLAS 756
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 6/168 (3%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQEL 123
+PN T+ + T + +A + + + L VS+ L+ LC+ + EA +L
Sbjct: 720 LPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDL 779
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ GFS Y+ I+ KM K E W EM +G+ D+ +Y+I+
Sbjct: 780 -MSKITESGFSP-----DCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIF 833
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFA 231
+ G+ KA+ +Y M + G++ + Y ++ + + DF+
Sbjct: 834 IRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYDFS 881
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 175/355 (49%), Gaps = 18/355 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+ ++I+ K + D + L +M D+ + IPN TF +M + Y + +A +++
Sbjct: 480 TFTALINGFCKDKKMDEAARLFDKMIDS-NVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQ 538
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E GLK D +Y +L+ LC V +A E F + ++ L + T + L G
Sbjct: 539 MVEMGLKPDNYTYRSLISGLCLTSGVSKANE--FVADLENSYAVLNNFSLTAL----LYG 592
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+F+ + + W+EM RGV DL S++I + K K+ L++EMK++G+K D
Sbjct: 593 FFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPD 652
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ Y +I A+ E + A+ + +M G P+ VT +I LC++G + A +
Sbjct: 653 DIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCK 712
Query: 272 EMPKKGCVPDVITYHCFFRC------LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
EM +P+ TY+CF +EK ++ L M++ G + ++ +L++
Sbjct: 713 EMLAGNVLPNKFTYNCFLDYFATEGDMEKAKD---LHSAMLQ-GHLASIVSFNILIKGLC 768
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ G ++ + K+ E G SPD +Y+ ++ L G ++ A + EM KGL
Sbjct: 769 KAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGL 823
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 129/257 (50%), Gaps = 11/257 (4%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE 127
+F I+ + H ++ F ++ E G+K D++ Y ++DAL + +++I+A C+ +
Sbjct: 620 SFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALN-CWDQ 678
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
G+S T + +++ K + G +EM V+ + +Y+ ++D
Sbjct: 679 MVVDGYS-----PNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYF 733
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
G KA L+ M + G +V++N +I+ + + + A+ + ++ E G P
Sbjct: 734 ATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDC 792
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR---CLEKPREILGLFDR 304
++ +T+I LC+ G + +A+ + EM KG PDV+ Y+ F R + + LG++
Sbjct: 793 ISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTN 852
Query: 305 MIESGIRPKMDTYVMLL 321
MI SG++P DTY LL
Sbjct: 853 MIRSGVQPNWDTYRALL 869
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 5/255 (1%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+Y +R + + R M+ GV Y++ M +CK+ + +AV++ M
Sbjct: 200 VYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVM 259
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
G+ D V Y T++ E ++ A+R+ +M +G PS C+ +I L + V
Sbjct: 260 VNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELV 319
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVML 320
EA+++ ++ G VP+V Y+ L E+ + LF M G+ P TY +L
Sbjct: 320 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAIL 379
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + G + ++ KM + G + YN+L++ +G LD AR M +GL
Sbjct: 380 IHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGL 439
Query: 381 SAKPREELGTKLVQG 395
+ P + L+ G
Sbjct: 440 T--PTAASYSPLIAG 452
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 171/398 (42%), Gaps = 75/398 (18%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T + ++ L K +F L+ +L +M + + + + + Y + ++ A G +
Sbjct: 165 TASQILFSLVKIRQFALARDLFDKMLQSGVHLDEY-VYTAGIRAYCESRNLDGARGLVVR 223
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENK--NVGFSGLVEMNKTKIYN--- 146
++ G+K V Y L+ LC+ V EA E+ +N N+G + +T +Y
Sbjct: 224 MESEGVKASAVPYNVLMYGLCKNMRVQEAVEV---KNVMVNIGVTADEVTYRTLVYGFCR 280
Query: 147 -----MILRGWFKMSWWG------KCREFWEEMDKR----------------GVVKDLHS 179
M LR M G C +E+ K+ G+V ++ +
Sbjct: 281 MEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFA 340
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y+ +D +CK+ + A +L+KEM +G++ + V Y +I A+ ++ A+ ++ +MR
Sbjct: 341 YNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 400
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF---------- 289
+ G + +V N++I C+ G + A +L+ M K+G P +Y
Sbjct: 401 DKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLS 460
Query: 290 RCLEKPREILG----------------------------LFDRMIESGIRPKMDTYVMLL 321
C+E RE+ LFD+MI+S + P T+ +++
Sbjct: 461 SCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMI 520
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ G +R F ++ +M E+G PD + Y +L+ L
Sbjct: 521 EGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 152/357 (42%), Gaps = 45/357 (12%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+PN + + + ++A F ++ GL+ +EV+Y L+ ALC+ + +IE
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCK-RGMIEDAL 393
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
F + ++ G V YN ++ G+ K + R M K G+ SYS
Sbjct: 394 CLFDKMRDKGIKVTV-----YPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSP 448
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ +C++G ++L++EM ++GI + + +I + +D A R++ +M +
Sbjct: 449 LIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSN 508
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCLEKPR 296
P+ VT N +I+ C G +R+A+ + +M + G PD TY C + K
Sbjct: 509 VIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKAN 568
Query: 297 EILG--------------------------------LFDRMIESGIRPKMDTYVMLLRKF 324
E + L+D M G++ + ++ +++
Sbjct: 569 EFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAA 628
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ V++++M+E G PD+ Y ++DAL + + A ++M G S
Sbjct: 629 LKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYS 685
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/424 (20%), Positives = 166/424 (39%), Gaps = 81/424 (19%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
YN++ID L K FD + L M PN T+ I+ ++ +A+ F+K
Sbjct: 340 AYNALIDKLCKNERFDDADRLFKEMAGRGLE-PNEVTYAILIHALCKRGMIEDALCLFDK 398
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + G+K V Y +L++ C+ + A+ L G K GL + Y+ ++ G
Sbjct: 399 MRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE----GLTPTAAS--YSPLIAG 452
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS--------------------- 190
+ C E EM +RG+ + ++++ ++ CK
Sbjct: 453 LCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN 512
Query: 191 --------------GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV-------- 228
G KA +LY +M + G+K D Y ++I + ++ GV
Sbjct: 513 EVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA 572
Query: 229 ----------DFAM-----------------RVYREMREMGCQPSVVTCNTVIKLLCENG 261
+F++ ++ EM G + +V+ ++ +
Sbjct: 573 DLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 632
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYV 318
++ + EM ++G PD I Y C L K + L +D+M+ G P T+
Sbjct: 633 DKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHT 692
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+L+ + G+L ++ K+M P++F YN +D +G ++ A+ M
Sbjct: 693 VLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQG 752
Query: 379 GLSA 382
L++
Sbjct: 753 HLAS 756
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 6/168 (3%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQEL 123
+PN T+ + T + +A + + + L VS+ L+ LC+ + EA +L
Sbjct: 720 LPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDL 779
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ GFS Y+ I+ KM K E W EM +G+ D+ +Y+I+
Sbjct: 780 -MSKITESGFS-----PDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIF 833
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFA 231
+ G+ KA+ +Y M + G++ + Y ++ + + DF+
Sbjct: 834 IRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYDFS 881
>gi|449435037|ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Cucumis sativus]
Length = 519
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 186/410 (45%), Gaps = 27/410 (6%)
Query: 4 LSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
L + +DWK AL F W E+ F HT D Y+ +ID LGK + ++ MK+ +
Sbjct: 111 LQRFKDDWKSALGVFRWAESLSGFKHTPDLYDILIDTLGKTKQLVKMRGMLEEMKE--AR 168
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQE 122
+ T +R+ A A+ F+ L+ +GL+ N L+D LC+ K V +A++
Sbjct: 169 LVTLDTVAKAMRRFAGAGQWENAVRIFDDLETYGLEKNTESMNVLLDTLCKEKKVEKARQ 228
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ ++ + +NM + GW K++ + EEM G + SYS
Sbjct: 229 MYLELKSHIAPNA-------NTFNMFIHGWCKVNKIDEAHWTLEEMKGYGHRPCVISYST 281
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ C K +L EM +G +V+ Y T++ ++ SE + A+++ M+ G
Sbjct: 282 IILFYCHRCNFNKVYELLDEMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAG 341
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVL-AEMPKKGCVPDVITYHCFFRCL-EKPRE--I 298
+P + N +I L G+VREA V EMP K +P+ TY+ + RE
Sbjct: 342 YEPDTLFYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYNSMIAMYCRRAREEKA 401
Query: 299 LGLFDRMIES-GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL----GCSPDEFAYN 353
+ L + M +S +P + TY LL+ R G + + + ++E+ S D Y+
Sbjct: 402 MKLLEEMQKSEHCKPDVQTYYPLLKSCFRTG--KTDYDLSNLLDEMINKHHLSLDISTYS 459
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGLSAKPR----EELGTKLVQGGLDG 399
L+ L D A + E+M ++ + KPR + L + Q +DG
Sbjct: 460 LLIHGLCRANKCDWAYQLFEKMISQDI--KPRYLTCQLLLDEFKQKNMDG 507
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 167/356 (46%), Gaps = 20/356 (5%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
++ T +SVI L K D + +L+ M P+ AT ++ A + EA
Sbjct: 373 SSGTCHSVIQELCKAGRVDSALSLLETMIKR-GYCPDMATHSMLINELCKADKIQEAQEF 431
Query: 90 FNKLDE---FGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVE----MNKT 142
+D SY +L+++LC+ K V +A + FS +V +
Sbjct: 432 LQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAI---------FSTMVSERSFVPDV 482
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
Y++++ G+ K+ G+ + +++M V ++ +Y+ +++ + + G+ A +Y+E
Sbjct: 483 VSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEE 542
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M G DV+ Y+T+I ++ D A ++ M GC+P+ VT N ++ LC+ +
Sbjct: 543 MVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESK 602
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVM 319
EA+ + +M ++GC PD +TY F + K + + +FD M+ G P + Y
Sbjct: 603 PDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNC 662
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
LL+ F R G +++ M C PD ++N ++D L LD A + E M
Sbjct: 663 LLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERM 718
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 147/315 (46%), Gaps = 20/315 (6%)
Query: 80 AHLVNEAMGTFNKL--DEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLV 137
A V++A F+ + + + D VSY L+D C+ + A++L + ++
Sbjct: 459 AKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKL---------YKQMI 509
Query: 138 EMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPW 194
++N YN L G + + +EEM G D+ +YS + + K
Sbjct: 510 DLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHD 569
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
+A +L++ M +G + + V YN ++ + D A ++R+M E GC P VT T++
Sbjct: 570 QAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLL 629
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHC----FFRCLEKPREILGLFDRMIESGI 310
C G++ +A V EM KG PDV+ Y+C FFR KP E LF M+
Sbjct: 630 YGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRA-GKPGEAKQLFQVMVSRQC 688
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE-LGCSPDEFAYNALVDALIDKGMLDMAR 369
+P ++ +++ + L V+++ME+ GCSPD YN+L+ L + L A
Sbjct: 689 KPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAM 748
Query: 370 KYDEEMFAKGLSAKP 384
K +E+ LS P
Sbjct: 749 KVFKEIDRLKLSPDP 763
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 139/319 (43%), Gaps = 9/319 (2%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL 123
P+ T + + A V+ A+ + + G D ++ L++ LC+ + EAQE
Sbjct: 372 PSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEF 431
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM-DKRGVVKDLHSYSI 182
G ++ + + YN +L K + + M +R V D+ SYSI
Sbjct: 432 LQGMDRKI----SSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSI 487
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D CK + +A KLYK+M +V YN + + + A VY EM G
Sbjct: 488 LIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAG 547
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREIL 299
C P V+T +T+I + +A+ + M +GC P+ +TY+C L KP E
Sbjct: 548 CSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAH 607
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
LF +M+E G P TY LL F G + V+ +M G PD AYN L+
Sbjct: 608 ELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGF 667
Query: 360 IDKGMLDMARKYDEEMFAK 378
G A++ + M ++
Sbjct: 668 FRAGKPGEAKQLFQVMVSR 686
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 125/271 (46%), Gaps = 12/271 (4%)
Query: 121 QELCFGENKNVGFSGLVEMNK------TKIYNMILRGWFKMSWWGKCREFWEEMDKR--G 172
QELC + S L M K ++M++ K + +EF + MD++
Sbjct: 382 QELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISS 441
Query: 173 VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM-KKKGIKMDVVAYNTVIRAVGVSEGVDFA 231
SY+ ++ +CK+ K +A ++ M ++ DVV+Y+ +I + + A
Sbjct: 442 RSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRA 501
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF--- 288
++Y++M ++ C P+V T N + L GR+ +A V EM GC PDVITY
Sbjct: 502 EKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHG 561
Query: 289 FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
F K + LF+ MI G RP TY LL + +++KM E GC PD
Sbjct: 562 FSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPD 621
Query: 349 EFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
Y L+ + G ++ A + +EM +KG
Sbjct: 622 RVTYTTLLYGFCNVGKIEQAVEVFDEMVSKG 652
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 185/460 (40%), Gaps = 74/460 (16%)
Query: 5 SCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDIL---GKFFEFD------------- 48
SCY + A+ FF + D F ++ Y V + L GK EF
Sbjct: 174 SCYERNSDEAVRFFGEM-VDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAV 232
Query: 49 ---LSWNLIHRMKDNPSSIPNHATFRIMFKR-----------YVTAHL----VNEAMGTF 90
L L+ +I FR M K V AH ++EA F
Sbjct: 233 EMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLF 292
Query: 91 NKL--DEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
++ + + V++ + LC+ + +A E C +++ S +Y+M+
Sbjct: 293 LEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSS-------QPVYDML 345
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+R + K E E+ R + + + +CK+G+ A+ L + M K+G
Sbjct: 346 IRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGY 405
Query: 209 KMDVVAYNTVI----RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
D+ ++ +I +A + E +F + R++ S + N+++ LC+ +V
Sbjct: 406 CPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSR--SSSCFSYNSLLNSLCKAKKVH 463
Query: 265 EAYAVLAEM-PKKGCVPDVITYHCFFRCLEKPREILG----LFDRMIESGIRPKMDTYVM 319
+A+A+ + M ++ VPDV++Y K E LG L+ +MI+ P + TY
Sbjct: 464 QAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDE-LGRAEKLYKQMIDLNCVPNVTTYNA 522
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L R G + V+++M GCSPD Y+ L+ D A + E M ++G
Sbjct: 523 FLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRG 582
Query: 380 L----------------SAKPRE--ELGTKLVQGGLDGEQ 401
+KP E EL K+V+ G D ++
Sbjct: 583 CRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDR 622
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 135/319 (42%), Gaps = 32/319 (10%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A +A F+ + ++ F +Y+ +ID K E + L +M D + +P
Sbjct: 457 CKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMID-LNCVP 515
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL- 123
N T+ + + +A G + ++ G D ++Y L+ + +A EL
Sbjct: 516 NVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELF 575
Query: 124 -------CFGE--NKNVGFSGLVEMNKTK-------------------IYNMILRGWFKM 155
C N GL + +K Y +L G+ +
Sbjct: 576 ETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNV 635
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
+ E ++EM +G D+ +Y+ + ++GKP +A +L++ M + K D V++
Sbjct: 636 GKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSH 695
Query: 216 NTVIRAVGVSEGVDFAMRVYREM-REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
N +I + ++ +D A+ V+ M ++ GC P +VT N++I LC R+ EA V E+
Sbjct: 696 NIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEID 755
Query: 275 KKGCVPDVITYHCFFRCLE 293
+ PD ++ ++
Sbjct: 756 RLKLSPDPHAFNVLLEAIK 774
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 95/237 (40%), Gaps = 23/237 (9%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN +L + + + +E+M +GVV + +Y++ + C +AV+ + EM
Sbjct: 132 YNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMV 191
Query: 205 KKGIKMDVVAYNTV---IRAVGVSE------GVDFAMRVYREMREMGCQPSVVTCNTVIK 255
KG K Y V ++A G G D RV EM + N VI+
Sbjct: 192 DKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMM----LKKALLVNFVIQ 247
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPD--VITYHCFFRC-LEKPREILGLFDRM-IESGIR 311
+ EA + M K GC PD + +Y C LE E LF M +ES
Sbjct: 248 -----DKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAP 302
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
+ L + G + F + M+E S + Y+ L+ LI+ G +D A
Sbjct: 303 LNNVAWTAFLSGLCKSGKIEQAFEACRTMQE-SLSSSQPVYDMLIRLLIESGRIDKA 358
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 90/238 (37%), Gaps = 44/238 (18%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+++I + D + L M PN T+ + +EA F K
Sbjct: 554 TYSTLIHGFSLARKHDQAHELFETMISRGCR-PNAVTYNCLLHGLCKESKPDEAHELFRK 612
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G D V+Y L+ C + +A E+ F E + G V YN +L+G
Sbjct: 613 MVERGCDPDRVTYTTLLYGFCNVGKIEQAVEV-FDEMVSKGHDPDVVA-----YNCLLKG 666
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM------------------------ 187
+F+ G+ ++ ++ M R D S++I +D +
Sbjct: 667 FFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSP 726
Query: 188 ------------CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMR 233
C + +A+K++KE+ + + D A+N ++ A+ F +R
Sbjct: 727 DLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAIKCGIVYQFEIR 784
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 182/396 (45%), Gaps = 21/396 (5%)
Query: 9 NDWKRALEFFNWVETDCH--FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
++ KR +F + + + F T ++N+++ LGKF + N+ ++ + P+
Sbjct: 138 DELKRVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVK-PS 196
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCF 125
TF M V EA+ FNK+ +F L D +Y +L+ C + + +A E+
Sbjct: 197 LLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEV-- 254
Query: 126 GENKNVGFSGLVE--MNKTKI-YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
F +V+ N + Y+ ++ G G+ + EEM ++G+ +++Y++
Sbjct: 255 -------FDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTV 307
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ +C G+ A+ L + M KKG V Y +I + + ++ A+ +Y +M + G
Sbjct: 308 PISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEG 367
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREIL 299
P+ VT N +I LC GR A + M G + + TY+ + L + + +
Sbjct: 368 LVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAM 427
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+F++M++ G P + TY L+ + + G+L M+E C PDE Y L+
Sbjct: 428 VVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGF 487
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
G LD A + EM G+S P + T ++ G
Sbjct: 488 CKGGKLDSATSFFYEMLKCGIS--PNQWTYTAMIDG 521
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 167/367 (45%), Gaps = 13/367 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY S+I + + D ++ + RM + + PN T+ + + EAM +
Sbjct: 234 TYTSLILGHCRNRKLDKAFEVFDRMVKDGCN-PNSVTYSTLINGLCNEGRIGEAMDMLEE 292
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G++ V +Y + +LC+ V +A L +++G G +T Y I+ G
Sbjct: 293 MTEKGIEPTVYTYTVPISSLCDIGRVDDAINLV----RSMGKKGCSPSVQT--YTAIISG 346
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
F+ + +M K G+V + +Y+ ++ +C G+ A+K++ M+ G +
Sbjct: 347 LFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLAN 406
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
YN +I+ + + ++ AM V+ +M + G P+VVT NT+I + G + A L
Sbjct: 407 AQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLY 466
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M + C PD TY K ++ F M++ GI P TY ++ + + G
Sbjct: 467 MMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEG 526
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREEL 388
+ ++++MEE GCS YNA++ L A K+ +M +GL +P
Sbjct: 527 KIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGL--QPNTIT 584
Query: 389 GTKLVQG 395
T L+ G
Sbjct: 585 YTSLING 591
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 159/354 (44%), Gaps = 17/354 (4%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T TYN++I+ L F ++ + M+ + ++ N T+ + K + +AM F
Sbjct: 372 TVTYNALINELCTEGRFGIALKIFDWMEGH-GTLANAQTYNQIIKGLFGMDDIEKAMVVF 430
Query: 91 NKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIYNM 147
NK+ + G V N + ++E + + N + E N + Y
Sbjct: 431 NKMLKDGPSPTVVTYNTL--------IVENLKRGYLNNATRFLYMMKESNCEPDERTYCE 482
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++ G+ K F+ EM K G+ + +Y+ +D CK GK A+ L++ M++ G
Sbjct: 483 LISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENG 542
Query: 208 IKMDVVAYNTVIRAVGVSEGVDF--AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+ YN +I G+S+G F A + +M E G QP+ +T ++I LC+N
Sbjct: 543 CSASIETYNAIIS--GLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNL 600
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
A+ + EM KK C+P+ TY L + ++ +R+ E+G P +DTY L+
Sbjct: 601 AFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKV-DAAERLTENGCEPTIDTYSTLVSGLC 659
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R G + + M+E G SP Y +L+ A +D A + M KG
Sbjct: 660 REGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKG 713
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 142/356 (39%), Gaps = 15/356 (4%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
+ TY ++I L + + +L+ + H+M +PN T+ + T A+
Sbjct: 336 SVQTYTAIISGLFRAGKMELAIGMYHKMLKE-GLVPNTVTYNALINELCTEGRFGIALKI 394
Query: 90 FNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
F+ ++ G L + +Y ++ L IE + F + G S V T I +
Sbjct: 395 FDWMEGHGTLANAQTYNQIIKGLFGMDD-IEKAMVVFNKMLKDGPSPTVVTYNTLIVENL 453
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
RG+ F M + D +Y + CK GK A + EM K GI
Sbjct: 454 KRGYLN-----NATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGI 508
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ Y +I +D A+ ++ M E GC S+ T N +I L + R EA
Sbjct: 509 SPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEK 568
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFG 325
A+M ++G P+ ITY L K +F M + P TY L+
Sbjct: 569 FCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLC 628
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ G + +++ E GC P Y+ LV L +G + A + E M KGLS
Sbjct: 629 QEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLS 680
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 143/332 (43%), Gaps = 26/332 (7%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A FF + C + TY ++ID K + D++ +L RM++N S
Sbjct: 488 CKGGKLDSATSFF-YEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCS-A 545
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ + + +EA K+ E GL+ + ++Y +L++ LC+
Sbjct: 546 SIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCK----------- 594
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSW-WGKCRE----FWEEMDKRGVVKDLHS 179
N+ F EM K N + S +G C+E E + + G + +
Sbjct: 595 -NTATNLAFKIFHEMEKK---NCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCEPTIDT 650
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
YS + +C+ G+ +A +L + MK+KG+ + Y +++ A S VD A+ ++ M
Sbjct: 651 YSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMA 710
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL--EKPRE 297
G QP + +I LC R EA + + KK D+I + L E +
Sbjct: 711 VKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSD 770
Query: 298 ILGLFDRMIES-GIRPKMDTYVMLLRKFGRWG 328
+ F ++ES P + TY++L R+ + G
Sbjct: 771 LCMKFLYLMESRNCTPSLHTYIILARELSKVG 802
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 153/321 (47%), Gaps = 19/321 (5%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDAL----CEYKHVIEAQEL 123
F + Y + NEA+ F + ++GLK + V+Y ++DA E+K V+E
Sbjct: 114 AFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLE---- 169
Query: 124 CFGENKNVGFSGLVEMNKTKI-YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
F E G M +I +N +L K W R EM RG+ +D+ +Y+
Sbjct: 170 IFDEMLRNG------MQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNT 223
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D +CK G+ A ++ EM K I +VV Y+T+I + +D A ++ EM+ +G
Sbjct: 224 LLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLG 283
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE---IL 299
V+ NT++ + + GR EA V EM G DV+TY+ K + +
Sbjct: 284 ISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVR 343
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+F+ M + P + TY L+ + + G R V+++ ++ G D Y+AL+DAL
Sbjct: 344 KVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDAL 403
Query: 360 IDKGMLDMARKYDEEMFAKGL 380
G+++ A +EM +G+
Sbjct: 404 CKNGLVESAVSLLDEMTKEGI 424
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 156/375 (41%), Gaps = 31/375 (8%)
Query: 33 TYNSVIDILGKF-FEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
TYN+VID GK EF + M N P+ TF + L A
Sbjct: 149 TYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQ-PDRITFNSLLAVCSKGGLWEAARSLSC 207
Query: 92 KLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI------ 144
++ G+ ++ +Y L+DA+C+ G ++ F + EM I
Sbjct: 208 EMVNRGIDQDIFTYNTLLDAVCK------------GGQLDMAFEIMSEMPAKNILPNVVT 255
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y+ ++ G+ K R + EM G+ D SY+ + I K G+ +A+ + +EM+
Sbjct: 256 YSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREME 315
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
GI+ DVV YN ++ G D +V+ EM+ P+++T +T+I + + G R
Sbjct: 316 NSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYR 375
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLL 321
EA V E K G DV+ Y L K + L D M + GIRP + TY ++
Sbjct: 376 EAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 435
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
FGR V +++ G E ++L + ++K + ++ K
Sbjct: 436 DAFGRPATTESV------VDDAG-QTSELQIDSLSSSAVEKATKSLVADREDNRIIKIFG 488
Query: 382 AKPREELGTKLVQGG 396
E+ G GG
Sbjct: 489 QLAAEKAGQAKNSGG 503
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 119/247 (48%), Gaps = 6/247 (2%)
Query: 140 NKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAV-K 198
N ++ I+ + + + + + + M G+ +L +Y+ +D K G +K V +
Sbjct: 110 NTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLE 169
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGV-DFAMRVYREMREMGCQPSVVTCNTVIKLL 257
++ EM + G++ D + +N+++ AV G+ + A + EM G + T NT++ +
Sbjct: 170 IFDEMLRNGMQPDRITFNSLL-AVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAV 228
Query: 258 CENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKM 314
C+ G++ A+ +++EMP K +P+V+TY K + LF+ M GI
Sbjct: 229 CKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDR 288
Query: 315 DTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
+Y LL + + G V ++ME G D YNAL+ + D+ RK EE
Sbjct: 289 VSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEE 348
Query: 375 MFAKGLS 381
M A+ +S
Sbjct: 349 MKARHVS 355
>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
Length = 740
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 158/342 (46%), Gaps = 21/342 (6%)
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQ 121
S P T+ I+ Y H + + +L + GL D+ SY +L+ + V +A
Sbjct: 10 SPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAH 68
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
L F E G + K I N I++ KM K ++M G+ DL +YS
Sbjct: 69 CL-FLEMMEQGV-----LPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYS 122
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+ +D +CKS KA ++ ++M + G + + + YN++I +S + ++RV+++M
Sbjct: 123 LIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSC 182
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--------CLE 293
G P+V CN+ I L ++GR EA + M KG PD+I+Y CL
Sbjct: 183 GVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLA 242
Query: 294 KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
++ +F+ M+ GI P + +L+ + R G + ++++ M+ G PD +
Sbjct: 243 ---DVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFA 299
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
++ +L G LD A M G+ P E + L+QG
Sbjct: 300 TVISSLCRIGRLDDALHKFNHMVDIGV--PPSEAVYGCLIQG 339
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 171/372 (45%), Gaps = 20/372 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+ +ID L K D + ++ +M + + PN T+ + Y + + NE++ F +
Sbjct: 120 TYSLIIDGLCKSKAMDKAERVLEQMVE-AGTRPNSITYNSLIHGYSISGMWNESVRVFKQ 178
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI--YNMIL 149
+ G+ V CN + AL ++ EA+ C + S +++ K I Y+ +L
Sbjct: 179 MSSCGVIPTVDNCNSFIHALFKHGRTNEAK--CIFD------SMVLKGPKPDIISYSTML 230
Query: 150 RGWFKM--SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
G+ S + M +G+ + H ++I ++ + G KA+ ++++M+ KG
Sbjct: 231 HGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKG 290
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ D V + TVI ++ +D A+ + M ++G PS +I+ C +G + +A
Sbjct: 291 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAK 350
Query: 268 AVLAEMPKKGCVPDVITYHCFF---RCLE-KPREILGLFDRMIESGIRPKMDTYVMLLRK 323
+++EM K P + Y C E + E + D M+++G RP + T+ L+
Sbjct: 351 ELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEG 410
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAK 383
+ G + F + M +G P+ + Y LVD G +D A +M KG+ K
Sbjct: 411 YCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGV--K 468
Query: 384 PREELGTKLVQG 395
P L + ++ G
Sbjct: 469 PTSVLYSIILHG 480
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 149/354 (42%), Gaps = 36/354 (10%)
Query: 53 LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDAL 111
LI N IP+ TF + +++A+ FN + + G+ E Y L+
Sbjct: 281 LIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGC 340
Query: 112 CEYKHVIEAQELCFGE--NKNVG------FSGLVE-----------------MNKTK--- 143
C + +++A+EL E NK++ FS ++ M +T
Sbjct: 341 CNHGELVKAKEL-ISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRP 399
Query: 144 ---IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
+N ++ G+ + + + M G+ + + Y +D CK+G+ A+ ++
Sbjct: 400 NVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVF 459
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
++M KG+K V Y+ ++ + + A +++ EM E G S+ T V+ LC N
Sbjct: 460 RDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRN 519
Query: 261 GRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTY 317
EA +L ++ D+IT++ + K +E LFD + G+ P + TY
Sbjct: 520 NCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTY 579
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
M++ + ++ +E+ G + D N +V L++K + A Y
Sbjct: 580 SMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNY 633
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 175/355 (49%), Gaps = 18/355 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+ ++I+ K + D + L +M D+ + IPN TF +M + Y + +A +++
Sbjct: 503 TFTALINGFCKDKKMDEAARLFDKMIDS-NVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQ 561
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E GLK D +Y +L+ LC V +A E F + ++ L + T + L G
Sbjct: 562 MVEMGLKPDNYTYRSLISGLCLTSGVSKANE--FVADLENSYAVLNNFSLTAL----LYG 615
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+F+ + + W+EM RGV DL S++I + K K+ L++EMK++G+K D
Sbjct: 616 FFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPD 675
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ Y +I A+ E + A+ + +M G P+ VT +I LC++G + A +
Sbjct: 676 DIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCK 735
Query: 272 EMPKKGCVPDVITYHCFFRC------LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
EM +P+ TY+CF +EK ++ L M++ G + ++ +L++
Sbjct: 736 EMLAGNVLPNKFTYNCFLDYFATEGDMEKAKD---LHSAMLQ-GHLASIVSFNILIKGLC 791
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ G ++ + K+ E G SPD +Y+ ++ L G ++ A + EM KGL
Sbjct: 792 KAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGL 846
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 129/257 (50%), Gaps = 11/257 (4%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE 127
+F I+ + H ++ F ++ E G+K D++ Y ++DAL + +++I+A C+ +
Sbjct: 643 SFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALN-CWDQ 701
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
G+S T + +++ K + G +EM V+ + +Y+ ++D
Sbjct: 702 MVVDGYSP-----NTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYF 756
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
G KA L+ M + G +V++N +I+ + + + A+ + ++ E G P
Sbjct: 757 ATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDC 815
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR---CLEKPREILGLFDR 304
++ +T+I LC+ G + +A+ + EM KG PDV+ Y+ F R + + LG++
Sbjct: 816 ISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTN 875
Query: 305 MIESGIRPKMDTYVMLL 321
MI SG++P DTY LL
Sbjct: 876 MIRSGVQPNWDTYRALL 892
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 5/255 (1%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+Y +R + + R M+ GV Y++ M +CK+ + +AV++ M
Sbjct: 223 VYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVM 282
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
G+ D V Y T++ E ++ A+R+ +M +G PS C+ +I L + V
Sbjct: 283 VNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELV 342
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVML 320
EA+++ ++ G VP+V Y+ L E+ + LF M G+ P TY +L
Sbjct: 343 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAIL 402
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + G + ++ KM + G + YN+L++ +G LD AR M +GL
Sbjct: 403 IHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGL 462
Query: 381 SAKPREELGTKLVQG 395
+ P + L+ G
Sbjct: 463 T--PTAASYSPLIAG 475
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 171/398 (42%), Gaps = 75/398 (18%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T + ++ L K +F L+ +L +M + + + + + Y + ++ A G +
Sbjct: 188 TASQILFSLVKIRQFALARDLFDKMLQSGVHLDEY-VYTAGIRAYCESRNLDGARGLVVR 246
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENK--NVGFSGLVEMNKTKIYN--- 146
++ G+K V Y L+ LC+ V EA E+ +N N+G + +T +Y
Sbjct: 247 MESEGVKASAVPYNVLMYGLCKNMRVQEAVEV---KNVMVNIGVTADEVTYRTLVYGFCR 303
Query: 147 -----MILRGWFKMSWWG------KCREFWEEMDKR----------------GVVKDLHS 179
M LR M G C +E+ K+ G+V ++ +
Sbjct: 304 MEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFA 363
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y+ +D +CK+ + A +L+KEM +G++ + V Y +I A+ ++ A+ ++ +MR
Sbjct: 364 YNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 423
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF---------- 289
+ G + +V N++I C+ G + A +L+ M K+G P +Y
Sbjct: 424 DKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLS 483
Query: 290 RCLEKPREILG----------------------------LFDRMIESGIRPKMDTYVMLL 321
C+E RE+ LFD+MI+S + P T+ +++
Sbjct: 484 SCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMI 543
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ G +R F ++ +M E+G PD + Y +L+ L
Sbjct: 544 EGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 581
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 152/357 (42%), Gaps = 45/357 (12%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+PN + + + ++A F ++ GL+ +EV+Y L+ ALC+ + +IE
Sbjct: 358 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCK-RGMIEDAL 416
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
F + ++ G V YN ++ G+ K + R M K G+ SYS
Sbjct: 417 CLFDKMRDKGIKVTV-----YPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSP 471
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ +C++G ++L++EM ++GI + + +I + +D A R++ +M +
Sbjct: 472 LIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSN 531
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCLEKPR 296
P+ VT N +I+ C G +R+A+ + +M + G PD TY C + K
Sbjct: 532 VIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKAN 591
Query: 297 EILG--------------------------------LFDRMIESGIRPKMDTYVMLLRKF 324
E + L+D M G++ + ++ +++
Sbjct: 592 EFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAA 651
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ V++++M+E G PD+ Y ++DAL + + A ++M G S
Sbjct: 652 LKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYS 708
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/424 (20%), Positives = 166/424 (39%), Gaps = 81/424 (19%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
YN++ID L K FD + L M PN T+ I+ ++ +A+ F+K
Sbjct: 363 AYNALIDKLCKNERFDDADRLFKEMAGRGLE-PNEVTYAILIHALCKRGMIEDALCLFDK 421
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + G+K V Y +L++ C+ + A+ L G K GL + Y+ ++ G
Sbjct: 422 MRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVK----EGLTPTAAS--YSPLIAG 475
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS--------------------- 190
+ C E EM +RG+ + ++++ ++ CK
Sbjct: 476 LCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN 535
Query: 191 --------------GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV-------- 228
G KA +LY +M + G+K D Y ++I + ++ GV
Sbjct: 536 EVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA 595
Query: 229 ----------DFAM-----------------RVYREMREMGCQPSVVTCNTVIKLLCENG 261
+F++ ++ EM G + +V+ ++ +
Sbjct: 596 DLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 655
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYV 318
++ + EM ++G PD I Y C L K + L +D+M+ G P T+
Sbjct: 656 DKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHT 715
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+L+ + G+L ++ K+M P++F YN +D +G ++ A+ M
Sbjct: 716 VLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQG 775
Query: 379 GLSA 382
L++
Sbjct: 776 HLAS 779
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 8/166 (4%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQEL 123
+PN T+ + T + +A + + + L VS+ L+ LC+ + EA +L
Sbjct: 743 LPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDL 802
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ GFS Y+ I+ KM K E W EM +G+ D+ +Y+I+
Sbjct: 803 -MSKITESGFSP-----DCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIF 856
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG--VSEG 227
+ G+ KA+ +Y M + G++ + Y ++ + VS+G
Sbjct: 857 IRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMVSKG 902
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 173/391 (44%), Gaps = 29/391 (7%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A +A+ F ++ + + T N +I+ + D + L H M+ N + +P
Sbjct: 49 CQAGTMDQAMAIFRGIQC----SPSVITLNILINGFCELQLLDKALELFHEMEKNFALVP 104
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCF 125
T+ + K Y +++A + D ++ ++ C+ + V EA +L
Sbjct: 105 EATTYTAIIKCYCKMDRLDQARQLLEE-SSCCSSDVIAITSVARGFCKAQRVDEAYQL-- 161
Query: 126 GENKNVGFSGLVEMNKTK----IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
+VE K +N+I+ G+ K + E E + G V + +Y+
Sbjct: 162 -------LLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYT 214
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKG--IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
+D CKSG +A++L+K + + + +VV +N +I + ++ ++ A + ++M+
Sbjct: 215 TLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMK 274
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------HCFFRCLE 293
+ T T++ LC+ GR E V EM ++GC P V+TY HC L+
Sbjct: 275 ARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQ 334
Query: 294 KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
++++ M+ GI P + TY +LL G +R ++K+ C P Y+
Sbjct: 335 DAQQVI---RSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYS 391
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
ALV ++D A KY EM + L+ P
Sbjct: 392 ALVRGCCKAALVDEAVKYYVEMLDRRLAPDP 422
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 173/379 (45%), Gaps = 21/379 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A A+E +N + + H N ++ L + D + + ++ +PS I
Sbjct: 14 CKAGRLGEAVECYNQM-LERHCVPNLRDINLLLASLCQAGTMDQAMAIFRGIQCSPSVI- 71
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDE-FGLKDE-VSYCNLVDALCEYKHVIEAQEL 123
T I+ + L+++A+ F+++++ F L E +Y ++ C+ + +A++L
Sbjct: 72 ---TLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQL 128
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM-DKRGVVKDLHSYSI 182
E + S ++ + + RG+ K + + +M +K+ D+ ++++
Sbjct: 129 L--EESSCCSSDVIAITS------VARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNV 180
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM--RE 240
+ CK+G+ +A ++ + + G + V Y T+I S + A+++++ + R+
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRD 240
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PRE 297
+P+VVT N +I LC+ R+ A+ ++ +M + D TY L K E
Sbjct: 241 HHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSE 300
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ +F+ M+ G P + TY L+ + G L+ V + M G PD Y L++
Sbjct: 301 VSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLE 360
Query: 358 ALIDKGMLDMARKYDEEMF 376
L + G + A ++ E++
Sbjct: 361 GLFENGKVRTATEFFEKIL 379
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 126/287 (43%), Gaps = 12/287 (4%)
Query: 48 DLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCN 106
D ++ L+ M + S+ P+ + ++ + A V EA L G + + V+Y
Sbjct: 156 DEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTT 215
Query: 107 LVDALCEYKHVIEAQEL--CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREF 164
L+D C+ ++ EA +L + +V +N ++ G K E
Sbjct: 216 LIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVV------TFNALISGLCKADRLEHAFEL 269
Query: 165 WEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGV 224
++M R + D +Y+ MD +CK G+ + ++++EM ++G VV Y T++ A
Sbjct: 270 VKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCK 329
Query: 225 SEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
+ + A +V R M G P V T +++ L ENG+VR A ++ ++ C P +
Sbjct: 330 AGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVV 389
Query: 285 YHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
Y R K E + + M++ + P T +L+ + G
Sbjct: 390 YSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRG 436
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 114/256 (44%), Gaps = 10/256 (3%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+++++ G K G+ E + +M +R V +L ++ + +C++G +A+ +++ ++
Sbjct: 6 FSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIFRGIQ 65
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM-REMGCQPSVVTCNTVIKLLCENGRV 263
V+ N +I + +D A+ ++ EM + P T +IK C+ R+
Sbjct: 66 ---CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRL 122
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI----LGLFDRMIESGIRPKMDTYVM 319
+A +L E C DVI R K + + L D + + +P + + +
Sbjct: 123 DQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNV 180
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++ F + G +R + + + + +GC P+ Y L+D G L A + + + ++
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRD 240
Query: 380 LSAKPREELGTKLVQG 395
A+P L+ G
Sbjct: 241 HHAEPNVVTFNALISG 256
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 99/232 (42%), Gaps = 8/232 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKD-NPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
TY ++ID K + L + + + PN TF + A + A
Sbjct: 212 TYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVK 271
Query: 92 KLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
++ L+ D +Y L+D LC+ E + F E G + V Y ++
Sbjct: 272 QMKARDLRADTFTYTTLMDGLCKQGRTSEVSRV-FEEMLREGCNPSV-----VTYTTLVH 325
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
K ++ M +G+ D+ +Y++ ++ + ++GK A + ++++ ++
Sbjct: 326 AHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPP 385
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
V Y+ ++R + VD A++ Y EM + P TC ++++LC+ GR
Sbjct: 386 CAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGR 437
>gi|297849786|ref|XP_002892774.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338616|gb|EFH69033.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 883
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 191/411 (46%), Gaps = 63/411 (15%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVID---ILGKFFEFDLSW-NLIHRMKDNPSSIPNH 67
+ ALE +E D T T+N VI+ + GK + + + +L H+ ++N +S
Sbjct: 483 QEALETLKLME-DRGVKPTYVTHNMVIEGLIVAGKLDKAEAFYESLEHKSRENDAS---- 537
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALC-EYKHVIEAQELCFG 126
M K Y A +++A F +L EF L V Y L +LC E H+ +AQ+L
Sbjct: 538 -----MVKGYCEAGCLDQAFERFIRL-EFPLPKSV-YFTLFTSLCAEKNHISKAQDL-LD 589
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
+G VE K+ +Y ++ W +++ K R+F+E + + ++ DL +Y+I ++
Sbjct: 590 RMWELG----VEPEKS-MYGKLIGAWCRVNNVRKARQFFEILVTKEIIPDLFTYTIMINT 644
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
C+ + +A L+++MK++ +K DVV Y ++ + + + V REM +P
Sbjct: 645 YCRLNELKQAYALFQDMKRRDVKPDVVTYTVLLNS-------NPELDVKREMEAFDVKPD 697
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE------------- 293
VV +I C+ V++AYA+ +M ++ VPDV+TY +
Sbjct: 698 VVLYTIMINRYCQLNDVKKAYALFKDMKRREIVPDVVTYTVLLKNNPELDLTREMKAFDV 757
Query: 294 KP------------------REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFV 335
KP +E G+FD+MIESG+ P Y L+ + G L+ +
Sbjct: 758 KPDVFYYTVLIDWQCKIGDLKEAKGIFDQMIESGVDPDAAPYTALIAGCCKMGNLKEAKM 817
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPRE 386
++ M E G PD +Y L+ G + A +EM KG+ KP +
Sbjct: 818 IFDLMIESGLKPDFVSYTTLIAGFRRNGFVRKAFTLMKEMLEKGI--KPTQ 866
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 115/285 (40%), Gaps = 43/285 (15%)
Query: 102 VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKC 161
++Y +V LC + IE E F + + G V +Y+ I+ G K K
Sbjct: 292 IAYRRVVRGLCN-EMRIEDAEKAFLDMEEHGIDPDV-----YVYSAIIEGHRKTMNIPKA 345
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
+ + +M ++G + S + C+ G A L++E ++ I +D V YN A
Sbjct: 346 FDIFNKMVEKGKRINCVIGSSILQCCCQMGNFSGAYDLFEEFRELNIPLDRVCYNVAFDA 405
Query: 222 VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
+G V+ A+ ++REM G P V+ T+I C G+ +A+ ++ EM G PD
Sbjct: 406 LGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGSGKTPD 465
Query: 282 VITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKME 341
++ Y+ +L R G + K ME
Sbjct: 466 IVIYN--------------------------------VLAGGLARNGLSQEALETLKLME 493
Query: 342 ELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPRE 386
+ G P +N +++ LI G LD A E F + L K RE
Sbjct: 494 DRGVKPTYVTHNMVIEGLIVAGKLDKA-----EAFYESLEHKSRE 533
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 115/276 (41%), Gaps = 23/276 (8%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C N+ ++A +FF + T TY +I+ + E ++ L MK P
Sbjct: 611 CRVNNVRKARQFFEILVTK-EIIPDLFTYTIMINTYCRLNELKQAYALFQDMKRRDVK-P 668
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ ++ N + +++ F +K D V Y +++ C+ V +A L
Sbjct: 669 DVVTYTVLLNS-------NPELDVKREMEAFDVKPDVVLYTIMINRYCQLNDVKKAYALF 721
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+ +V Y ++L+ ++ + EM V D+ Y++ +
Sbjct: 722 KDMKRREIVPDVV------TYTVLLKNNPEL-------DLTREMKAFDVKPDVFYYTVLI 768
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D CK G +A ++ +M + G+ D Y +I + A ++ M E G +
Sbjct: 769 DWQCKIGDLKEAKGIFDQMIESGVDPDAAPYTALIAGCCKMGNLKEAKMIFDLMIESGLK 828
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVP 280
P V+ T+I NG VR+A+ ++ EM +KG P
Sbjct: 829 PDFVSYTTLIAGFRRNGFVRKAFTLMKEMLEKGIKP 864
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 95/225 (42%), Gaps = 8/225 (3%)
Query: 164 FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
FWE +++ G+ D H+Y + + +C++ KL + + V Y I +
Sbjct: 205 FWE-IERLGLDADAHTYVLVVQALCRNDDKEGVDKLLIRLLNSETRNPCVFYLNFIEGLC 263
Query: 224 VSEGVDFAMRVYREMREMGCQPSV----VTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
+++ A + + +RE+ + + V++ LC R+ +A +M + G
Sbjct: 264 LNQMASMAYLLLQPLREVNILVDMSDLGIAYRRVVRGLCNEMRIEDAEKAFLDMEEHGID 323
Query: 280 PDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVV 336
PDV Y K I +F++M+E G R +L+ + G + +
Sbjct: 324 PDVYVYSAIIEGHRKTMNIPKAFDIFNKMVEKGKRINCVIGSSILQCCCQMGNFSGAYDL 383
Query: 337 WKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+++ EL D YN DAL G ++ A + EM KG++
Sbjct: 384 FEEFRELNIPLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIA 428
Score = 37.7 bits (86), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 92/223 (41%), Gaps = 28/223 (12%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D KR +E F+ +T + Y + D+ ++ L MK +P+ T
Sbjct: 684 DVKREMEAFDVKPDVVLYTIMINRYCQLNDV-------KKAYALFKDMKRR-EIVPDVVT 735
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGEN 128
+ ++ K N + ++ F +K +V Y L+D C+ + EA+ +
Sbjct: 736 YTVLLKN-------NPELDLTREMKAFDVKPDVFYYTVLIDWQCKIGDLKEAKGI----- 783
Query: 129 KNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
F ++E Y ++ G KM + + ++ M + G+ D SY+ +
Sbjct: 784 ----FDQMIESGVDPDAAPYTALIAGCCKMGNLKEAKMIFDLMIESGLKPDFVSYTTLIA 839
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV 228
++G KA L KEM +KGIK + + V A ++G+
Sbjct: 840 GFRRNGFVRKAFTLMKEMLEKGIKPTQASLSAVHYAKSKAKGL 882
>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 671
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 171/419 (40%), Gaps = 84/419 (20%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T TYN+V+ L +++ + L+ M N PN TF + + L++ A+
Sbjct: 212 TYTYNTVLMGLCGARQWEDAEALMAEMVRN-HCPPNEVTFATQIRAFCQNGLLDRAVQLL 270
Query: 91 NKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+++ ++G D V Y LV+ E V +A EL +G++ T YN L
Sbjct: 271 DRMPQYGCTPDVVIYSTLVNGFSEQGRVDDAIEL---------LNGMLCKPNTICYNAAL 321
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
+G W + EM ++ + + ++S+ +C++G A+++ ++M K G +
Sbjct: 322 KGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCR 381
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV--------------------- 248
D V YNT+I + VD A+++ + M C P V+
Sbjct: 382 PDAVIYNTLIYSFSEQGRVDDALKL---LNSMPCSPDVISFNAALKGLCRAERWDDAEEL 438
Query: 249 --------------TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC------- 287
T N +I LC+NGRV A V +MPK GC PD++TY
Sbjct: 439 IVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSE 498
Query: 288 ---------FFRCLEKPREILG-------------------LFDRMIESGIRPKMDTYVM 319
F+ + +I G L M P T+ +
Sbjct: 499 QGLVESAIELFQSMPCKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNI 558
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
L+ + G + V+++M + G +PD F YNAL++ ++G LD AR+ M K
Sbjct: 559 LINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTMSCK 617
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 154/338 (45%), Gaps = 34/338 (10%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+PN ATF ++ LV+ AM ++ ++G + D V Y L+ + E V +A +
Sbjct: 346 LPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALK 405
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L + + +N L+G + W E +M + +++I
Sbjct: 406 L---------LNSMPCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNI 456
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D +C++G+ A++++++M K G D+V Y+++I + V+ A+ +++ M
Sbjct: 457 LIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSM---P 513
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLF 302
C+P + N V+K LC R +A +++ M +K C P+ IT++ L + GL
Sbjct: 514 CKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQK----GLV 569
Query: 303 DRMIES-------GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
DR IE G P + TY L+ F G L + + + C PD +YN+
Sbjct: 570 DRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDA---RRLLSTMSCKPDAVSYNSA 626
Query: 356 VDALIDKGMLDMAR-KYDEEMFAKGLSAK-PREELGTK 391
+ KG+ R K EE+ A+ L K P E+ K
Sbjct: 627 L-----KGLCRAERWKEAEEVVAEMLRMKCPPNEVTFK 659
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 132/307 (42%), Gaps = 16/307 (5%)
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNV 131
I+ K+ + +A + L G D VS+ LV C + +A+ + +
Sbjct: 117 ILIKKLCAQRRLADAERVLDALKAAGAADPVSHNTLVAGYCRDGRLADAE-------RLL 169
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
+GL Y ++ G+ + G+ + + V D ++Y+ + +C +
Sbjct: 170 AAAGLSGAANVVTYTTLINGYCRS---GRLADALALIASMPVAPDTYTYNTVLMGLCGAR 226
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
+ A L EM + + V + T IRA + +D A+++ M + GC P VV +
Sbjct: 227 QWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYS 286
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPREILG-LFDRMIES 308
T++ E GRV +A +L M C P+ I Y+ + C+ + E +G L M+
Sbjct: 287 TLVNGFSEQGRVDDAIELLNGM---LCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRK 343
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
P T+ ML + G + V ++M + GC PD YN L+ + ++G +D A
Sbjct: 344 DCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDA 403
Query: 369 RKYDEEM 375
K M
Sbjct: 404 LKLLNSM 410
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 108/264 (40%), Gaps = 47/264 (17%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRM--KDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
++N+ + L + +D + LI +M +D P TF I+ VN A+ F
Sbjct: 418 SFNAALKGLCRAERWDDAEELIVQMLREDCPLI---EMTFNILIDSLCQNGRVNNAIEVF 474
Query: 91 NKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
++ ++G D V+Y +L++ L E V A EL F + YN +L
Sbjct: 475 EQMPKYGCTPDIVTYSSLINGLSEQGLVESAIEL---------FQSMPCKPDIFGYNAVL 525
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG-- 207
+G + + W E M ++ + +++I ++ +C+ G +A++++++M K G
Sbjct: 526 KGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGST 585
Query: 208 ------------------------------IKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
K D V+YN+ ++ + +E A V E
Sbjct: 586 PDIFTYNALINGFSEQGRLDDARRLLSTMSCKPDAVSYNSALKGLCRAERWKEAEEVVAE 645
Query: 238 MREMGCQPSVVTCNTVIKLLCENG 261
M M C P+ VT +L NG
Sbjct: 646 MLRMKCPPNEVTFKYANRLFVPNG 669
>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
Length = 808
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 158/342 (46%), Gaps = 21/342 (6%)
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQ 121
S P T+ I+ Y H + + +L + GL D+ SY +L+ + V +A
Sbjct: 96 SPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAH 154
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
L F E G + K I N I++ KM K ++M G+ DL +YS
Sbjct: 155 CL-FLEMMEQGV-----LPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYS 208
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+ +D +CKS KA ++ ++M + G + + + YN++I +S + ++RV+++M
Sbjct: 209 LIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSC 268
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--------CLE 293
G P+V CN+ I L ++GR EA + M KG PD+I+Y CL
Sbjct: 269 GVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLA 328
Query: 294 KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
++ +F+ M+ GI P + +L+ + R G + ++++ M+ G PD +
Sbjct: 329 ---DVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFA 385
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
++ +L G LD A M G+ P E + L+QG
Sbjct: 386 TVISSLCRIGRLDDALHKFNHMVDIGV--PPSEAVYGCLIQG 425
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 171/372 (45%), Gaps = 20/372 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+ +ID L K D + ++ +M + + PN T+ + Y + + NE++ F +
Sbjct: 206 TYSLIIDGLCKSKAMDKAERVLEQMVE-AGTRPNSITYNSLIHGYSISGMWNESVRVFKQ 264
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI--YNMIL 149
+ G+ V CN + AL ++ EA+ C + S +++ K I Y+ +L
Sbjct: 265 MSSCGVIPTVDNCNSFIHALFKHGRTNEAK--CIFD------SMVLKGPKPDIISYSTML 316
Query: 150 RGWFKM--SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
G+ S + M +G+ + H ++I ++ + G KA+ ++++M+ KG
Sbjct: 317 HGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKG 376
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ D V + TVI ++ +D A+ + M ++G PS +I+ C +G + +A
Sbjct: 377 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAK 436
Query: 268 AVLAEMPKKGCVPDVITYHCFF---RCLE-KPREILGLFDRMIESGIRPKMDTYVMLLRK 323
+++EM K P + Y C E + E + D M+++G RP + T+ L+
Sbjct: 437 ELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEG 496
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAK 383
+ G + F + M +G P+ + Y LVD G +D A +M KG+ K
Sbjct: 497 YCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGV--K 554
Query: 384 PREELGTKLVQG 395
P L + ++ G
Sbjct: 555 PTSVLYSIILHG 566
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 147/354 (41%), Gaps = 36/354 (10%)
Query: 53 LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDAL 111
LI N IP+ TF + +++A+ FN + + G+ E Y L+
Sbjct: 367 LIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGC 426
Query: 112 CEYKHVIEAQELCFGE--NKNVG------FSGLV-----------------------EMN 140
C + +++A+EL E NK++ FS ++ +
Sbjct: 427 CNHGELVKAKEL-ISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRP 485
Query: 141 KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
+N ++ G+ + + + M G+ + + Y +D CK+G+ A+ ++
Sbjct: 486 NVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVF 545
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
++M KG+K V Y+ ++ + + A +++ EM E G S+ T V+ LC N
Sbjct: 546 RDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRN 605
Query: 261 GRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTY 317
EA +L ++ D+IT++ + K +E LFD + G+ P + TY
Sbjct: 606 NCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTY 665
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
M++ + ++ +E+ G + D N +V L++K + A Y
Sbjct: 666 SMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNY 719
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 170/375 (45%), Gaps = 17/375 (4%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSIPNHATFRIMFKRYVTAHLVNE 85
F+ T TYN +I L + DL+ +++++ DN P T+ I+ + + V+E
Sbjct: 189 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQ--PTVITYTILIEATMLEGGVDE 246
Query: 86 AMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI 144
A+ +++ GLK D +Y ++ +C+ V A E+ +N+ G
Sbjct: 247 ALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMV----RNLELKGCEP--DVIS 300
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN++LR W + + +M ++ +YSI + +C+ GK +A+ L K MK
Sbjct: 301 YNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMK 360
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+KG+ D +Y+ +I A +D A+ M GC P +V NTV+ LC+NG+
Sbjct: 361 EKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKAD 420
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL----EKPREILGLFDRMIESGIRPKMDTYVML 320
+A + ++ + GC P+ +Y+ F L +K R L + M+ +GI P TY +
Sbjct: 421 QALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA-LHMILEMMSNGIDPDEITYNSM 479
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ R G + F + M P YN ++ ++ A E M G
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG- 538
Query: 381 SAKPREELGTKLVQG 395
+P E T L++G
Sbjct: 539 -CRPNETTYTVLIEG 552
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 120/238 (50%), Gaps = 3/238 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G+ KM+ + M + D +Y+I + +C GK A+K+ ++
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+ V+ Y +I A + GVD A+++ EM G +P + T NT+I+ +C+ G V
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLL 321
A+ ++ + KGC PDVI+Y+ R L K E L +M P + TY +L+
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R G + + K M+E G +PD ++Y+ L+ A +G LD+A ++ E M + G
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 98/228 (42%), Gaps = 37/228 (16%)
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVV---------------------------------- 213
C+SG +++ L + M +KG DV+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
AYN +I +D A RV MR P VT N +I LC G++ A VL ++
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 274 PKKGCVPDVITYHCFFRC--LEKP-REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
C P VITY LE E L L D M+ G++P M TY ++R + G +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
F + + +E GC PD +YN L+ AL+++G + K +MF++
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327
>gi|222631252|gb|EEE63384.1| hypothetical protein OsJ_18196 [Oryza sativa Japonica Group]
Length = 378
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 149/320 (46%), Gaps = 18/320 (5%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGE 127
F+I K + A + A+G F + G D V N L+ AL AQE G
Sbjct: 3 AFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVAL--------AQE-GLGR 53
Query: 128 NKNVGFSGLVEMNKTKI--YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
N F + + + Y ++ W + W EM + G+ D+ ++ ++
Sbjct: 54 EANQVFDRMRDRYAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIE 113
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
+ + + +AVK+++ MK KG +V Y +IR +D AMR + EM+++GCQP
Sbjct: 114 GLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQP 173
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLF 302
V T ++ R+ A+L EM +KGC PD TY+ + L P + ++
Sbjct: 174 DVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIY 233
Query: 303 DRMIESGIRPKMDTYVMLLRKF--GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+MI+ G+ P + TY M+++ + G ++ VW++M G PD +Y ++ I
Sbjct: 234 KKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGC-AVWEEMHRKGICPDVNSYTVFINGHI 292
Query: 361 DKGMLDMARKYDEEMFAKGL 380
G + A KY EEM KG+
Sbjct: 293 RHGRPEEACKYIEEMIQKGM 312
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 96/227 (42%), Gaps = 10/227 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
P+ M + + EA+ F + G V +Y L+ C+ + A
Sbjct: 103 PDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMR- 161
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
CF E ++VG V Y +L G+ + EEM ++G D +Y+
Sbjct: 162 CFEEMQDVGCQPDVA-----TYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNAL 216
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM--RVYREMREM 241
+ ++ P A ++YK+M KKG++ + YN ++++ + G ++ M V+ EM
Sbjct: 217 IKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLG-GRNYMMGCAVWEEMHRK 275
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
G P V + I +GR EA + EM +KG I Y+ F
Sbjct: 276 GICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKF 322
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 156/364 (42%), Gaps = 48/364 (13%)
Query: 61 PSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIE 119
PSS + T ++ Y + E + +++ G + D ++ +LV+ LC HV
Sbjct: 278 PSS---NVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKH 334
Query: 120 AQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
A E+ GF + YN ++ G K+ + E +M R + +
Sbjct: 335 ALEI-LDVMLQEGFDPDI-----FTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVT 388
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y+ + +CK + +A +L + + KGI DV +N++I+ + ++ AM ++ EM+
Sbjct: 389 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMK 448
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCLE 293
GC P T N +I LC GR+ EA ++L EM GC +V+TY+ C + +E
Sbjct: 449 TKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIE 508
Query: 294 KPREILG--------------------------------LFDRMIESGIRPKMDTYVMLL 321
+ EI L D+M+ G++P TY LL
Sbjct: 509 EAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLL 568
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
F R G ++ + + M GC PD Y L+ L G +++A + + KG+
Sbjct: 569 TYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMV 628
Query: 382 AKPR 385
P+
Sbjct: 629 LAPQ 632
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 169/413 (40%), Gaps = 47/413 (11%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
+D L+ +W +F ++ Y V+ LGK F ++ MK I
Sbjct: 83 SDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEI-RRG 141
Query: 69 TFRIMFKRYVTAHLVNEAMGTFN--------KLDEF------------------------ 96
TF I+ + Y L +EA+ + KLD F
Sbjct: 142 TFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSR 201
Query: 97 ----GLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
G+K +V+ N L+ ALC H I L E + G S K + +++G
Sbjct: 202 MVSRGIKPDVTTFNILIKALCR-AHQIRPAILMMEEMGSYGLSP-----DEKTFTTLMQG 255
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + E+M G + ++ + CK G+ + + EM +G + D
Sbjct: 256 FIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPD 315
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+N+++ + V A+ + M + G P + T N++I LC+ G V EA +L
Sbjct: 316 RFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILN 375
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+M + P+ +TY+ L K ++ L + GI P + T+ L++
Sbjct: 376 QMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTN 435
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
R ++++M+ GC PDEF YN L+D+L +G L+ A +EM + G S
Sbjct: 436 NHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCS 488
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 134/283 (47%), Gaps = 12/283 (4%)
Query: 6 CYANDWKRALEFFNWVETD-CHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C N+ + A+E F ++T CH T YN +ID L + + +L+ M+ + S
Sbjct: 432 CLTNNHRLAMELFEEMKTKGCHPDEFT--YNMLIDSLCSRGRLEEALSLLKEMESSGCS- 488
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
N T+ + + + EA F++++ G+ ++ V+Y L+D LC+ + V EA +L
Sbjct: 489 RNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQL 548
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ GL T YN +L + + K + + M G D +Y
Sbjct: 549 M----DQMLMEGLKPDKFT--YNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTL 602
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ + K+G+ A +L + ++ KG+ + YN VI+A+ + A+R++REM E G
Sbjct: 603 ILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGD 662
Query: 244 QPSVVTCNTVIKLLCE-NGRVREAYAVLAEMPKKGCVPDVITY 285
P VT V + LC G + EA L EM KG +PD ++
Sbjct: 663 PPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSF 705
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 175/355 (49%), Gaps = 18/355 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+ ++I+ K + D + L +M D+ + IPN TF +M + Y + +A +++
Sbjct: 480 TFTALINGFCKDKKMDEAARLFDKMIDS-NVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQ 538
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E GLK D +Y +L+ LC V +A E F + ++ L + T + L G
Sbjct: 539 MVEMGLKPDNYTYRSLISGLCLTSGVSKANE--FVADLENSYAVLNNFSLTAL----LYG 592
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
F+ + + W+EM RGV DL S++I + K K+ L++EMK++G+K D
Sbjct: 593 LFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPD 652
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ Y +I A+ E + A+ + +M G P+ VT +I LC++G + A +
Sbjct: 653 DIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCK 712
Query: 272 EMPKKGCVPDVITYHCFFRC------LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
EM +P+ TY+CF +EK ++ L M++ G + ++ +L++
Sbjct: 713 EMLAGNVLPNKFTYNCFLDYFATEGDMEKAKD---LHSAMLQ-GHLASIVSFNILIKGLC 768
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ G ++ + +K+ E G SPD +Y+ ++ L G ++ A + EM KGL
Sbjct: 769 KAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGL 823
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 130/257 (50%), Gaps = 11/257 (4%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE 127
+F I+ + H ++ F ++ E G+K D++ Y ++DAL + +++I+A C+ +
Sbjct: 620 SFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALN-CWDQ 678
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
G+S T + +++ K + G +EM V+ + +Y+ ++D
Sbjct: 679 MVIDGYSP-----NTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYF 733
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
G KA L+ M + G +V++N +I+ + + + A+ + R++ E G P
Sbjct: 734 ATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDC 792
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR---CLEKPREILGLFDR 304
++ +T+I LC+ G + +A+ + EM KG PDV+ Y+ F R + + LG++
Sbjct: 793 ISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTN 852
Query: 305 MIESGIRPKMDTYVMLL 321
MI SG++P DTY LL
Sbjct: 853 MIRSGVQPNWDTYRALL 869
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 5/255 (1%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+Y +R + + R M+ GV Y++ M +CK+ + +AV++ M
Sbjct: 200 VYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVM 259
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
G+ D V Y T++ E ++ A+R+ +M +G PS C+ +I L + V
Sbjct: 260 VNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELV 319
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVML 320
EA+++ ++ G VP+V Y+ L E+ + LF M G+ P TY +L
Sbjct: 320 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAIL 379
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + G + ++ KM + G + YN+L++ +G LD AR M +GL
Sbjct: 380 IHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGL 439
Query: 381 SAKPREELGTKLVQG 395
+ P + L+ G
Sbjct: 440 T--PTAASYSPLIAG 452
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 146/335 (43%), Gaps = 45/335 (13%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+PN + + + ++A F ++ GL+ +EV+Y L+ ALC+ + +IE
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCK-RGMIEDAL 393
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
F + ++ G V YN ++ G+ K + R M K G+ SYS
Sbjct: 394 CLFDKMRDKGIKVTV-----YPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSP 448
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ +C++G A++L++EM ++GI + + +I + +D A R++ +M +
Sbjct: 449 LIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSN 508
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCLEKPR 296
P+ VT N +I+ C G +R+A+ + +M + G PD TY C + K
Sbjct: 509 VIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKAN 568
Query: 297 EIL--------------------GLF------------DRMIESGIRPKMDTYVMLLRKF 324
E + GLF D M G++ + ++ +++
Sbjct: 569 EFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAA 628
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ V++++M+E G PD+ Y ++DAL
Sbjct: 629 LKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDAL 663
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 167/396 (42%), Gaps = 71/396 (17%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T + ++ L K +F L+ +L +M + + + + + Y + ++ A G +
Sbjct: 165 TASQILFSLVKIRQFALARDLFDKMLQSGVHLDEY-VYTAGIRAYCESRNLDGARGLVVR 223
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYN----- 146
++ G+K V Y L+ LC+ V EA E+ N+G + +T +Y
Sbjct: 224 MESEGVKASAVPYNVLMYGLCKNMRVQEAVEVK-NVMVNIGVTADEVTYRTLVYGFCRME 282
Query: 147 ---MILRGWFKMSWWG------KCREFWEEMDKR----------------GVVKDLHSYS 181
M LR M G C +E+ K+ G+V ++ +Y+
Sbjct: 283 ELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYN 342
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+D +CK+ + A +L+KEM +G++ + V Y +I A+ ++ A+ ++ +MR+
Sbjct: 343 ALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDK 402
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL--------- 292
G + +V N++I C+ G + A +L+ M K+G P +Y L
Sbjct: 403 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSA 462
Query: 293 -----------------------------EKPREILGLFDRMIESGIRPKMDTYVMLLRK 323
+K E LFD+MI+S + P T+ +++
Sbjct: 463 MELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEG 522
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ G +R F ++ +M E+G PD + Y +L+ L
Sbjct: 523 YCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/418 (19%), Positives = 168/418 (40%), Gaps = 69/418 (16%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
YN++ID L K FD + L M PN T+ I+ ++ +A+ F+K
Sbjct: 340 AYNALIDKLCKNERFDDADRLFKEMAGRGLE-PNEVTYAILIHALCKRGMIEDALCLFDK 398
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENK-------------------NVG 132
+ + G+K V Y +L++ C+ + A+ L G K N
Sbjct: 399 MRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGD 458
Query: 133 FSGLVEMNK----------TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
S +E+++ + ++ G+ K + +++M V+ + ++++
Sbjct: 459 LSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNV 518
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV-------------- 228
++ C G KA +LY +M + G+K D Y ++I + ++ GV
Sbjct: 519 MIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSY 578
Query: 229 ----DFAM-----------------RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+F++ ++ EM G + +V+ ++ + ++
Sbjct: 579 AVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSC 638
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKF 324
+ EM ++G PD I Y C L K + L +D+M+ G P T+ +L+
Sbjct: 639 VLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNL 698
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ G+L ++ K+M P++F YN +D +G ++ A+ M L++
Sbjct: 699 CKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLAS 756
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 6/168 (3%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQEL 123
+PN T+ + T + +A + + + L VS+ L+ LC+ + EA +L
Sbjct: 720 LPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDL 779
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ GFS Y+ I+ KM K E W EM +G+ D+ +Y+I+
Sbjct: 780 -MRKITESGFSP-----DCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIF 833
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFA 231
+ G+ KA+ +Y M + G++ + Y ++ + + DF+
Sbjct: 834 IRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYDFS 881
>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
Length = 439
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 173/391 (44%), Gaps = 29/391 (7%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A +A+ F ++ + + T N +I+ + D + L H M+ N + +P
Sbjct: 49 CQAGKMDQAMAIFRGIQC----SPSVITLNILINGFCELQLLDKALELFHEMEKNFALVP 104
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCF 125
T+ + K Y +++A + D ++ ++ C+ + V EA +L
Sbjct: 105 EATTYTAIIKCYCKMDRLDQARQLLEE-SSCCSSDVIAITSVARGFCKAQRVDEAYQL-- 161
Query: 126 GENKNVGFSGLVEMNKTK----IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
+VE K +N+I+ G+ K + E E + G V + +Y+
Sbjct: 162 -------LLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYT 214
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKG--IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
+D CKSG +A++L+K + + + +VV +N +I + ++ ++ A + ++M+
Sbjct: 215 TLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMK 274
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------HCFFRCLE 293
+ T T++ LC+ GR E V EM ++GC P V+TY HC L+
Sbjct: 275 ARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQ 334
Query: 294 KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
++++ M+ GI P + TY +LL G +R ++K+ C P Y+
Sbjct: 335 DAQQVI---RSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYS 391
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
ALV ++D A KY EM + L+ P
Sbjct: 392 ALVRGCCKAALVDEAVKYYVEMLDRRLAPDP 422
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 174/379 (45%), Gaps = 21/379 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A A+E +N + + H N ++ L + + D + + ++ +PS I
Sbjct: 14 CKAGRLGEAVECYNQM-LERHCVPNLRDINLLLASLCQAGKMDQAMAIFRGIQCSPSVI- 71
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDE-FGLKDE-VSYCNLVDALCEYKHVIEAQEL 123
T I+ + L+++A+ F+++++ F L E +Y ++ C+ + +A++L
Sbjct: 72 ---TLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQL 128
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM-DKRGVVKDLHSYSI 182
E + S ++ + + RG+ K + + +M +K+ D+ ++++
Sbjct: 129 L--EESSCCSSDVIAITS------VARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNV 180
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM--RE 240
+ CK+G+ +A ++ + + G + V Y T+I S + A+++++ + R+
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRD 240
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PRE 297
+P+VVT N +I LC+ R+ A+ ++ +M + D TY L K E
Sbjct: 241 HHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSE 300
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ +F+ M+ G P + TY L+ + G L+ V + M G PD Y L++
Sbjct: 301 VSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLE 360
Query: 358 ALIDKGMLDMARKYDEEMF 376
L + G + A ++ E++
Sbjct: 361 GLFENGKVRTATEFFEKIL 379
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 126/287 (43%), Gaps = 12/287 (4%)
Query: 48 DLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCN 106
D ++ L+ M + S+ P+ + ++ + A V EA L G + + V+Y
Sbjct: 156 DEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTT 215
Query: 107 LVDALCEYKHVIEAQEL--CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREF 164
L+D C+ ++ EA +L + +V +N ++ G K E
Sbjct: 216 LIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVV------TFNALISGLCKADRLEHAFEL 269
Query: 165 WEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGV 224
++M R + D +Y+ MD +CK G+ + ++++EM ++G VV Y T++ A
Sbjct: 270 VKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCK 329
Query: 225 SEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
+ + A +V R M G P V T +++ L ENG+VR A ++ ++ C P +
Sbjct: 330 AGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVV 389
Query: 285 YHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
Y R K E + + M++ + P T +L+ + G
Sbjct: 390 YSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRG 436
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 115/256 (44%), Gaps = 10/256 (3%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+++++ G K G+ E + +M +R V +L ++ + +C++GK +A+ +++ ++
Sbjct: 6 FSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIFRGIQ 65
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM-REMGCQPSVVTCNTVIKLLCENGRV 263
V+ N +I + +D A+ ++ EM + P T +IK C+ R+
Sbjct: 66 ---CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRL 122
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI----LGLFDRMIESGIRPKMDTYVM 319
+A +L E C DVI R K + + L D + + +P + + +
Sbjct: 123 DQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNV 180
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++ F + G +R + + + + +GC P+ Y L+D G L A + + + ++
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRD 240
Query: 380 LSAKPREELGTKLVQG 395
A+P L+ G
Sbjct: 241 HHAEPNVVTFNALISG 256
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 99/232 (42%), Gaps = 8/232 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKD-NPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
TY ++ID K + L + + + PN TF + A + A
Sbjct: 212 TYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVK 271
Query: 92 KLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
++ L+ D +Y L+D LC+ E + F E G + V Y ++
Sbjct: 272 QMKARDLRADTFTYTTLMDGLCKQGRTSEVSRV-FEEMLREGCNPSV-----VTYTTLVH 325
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
K ++ M +G+ D+ +Y++ ++ + ++GK A + ++++ ++
Sbjct: 326 AHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPP 385
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
V Y+ ++R + VD A++ Y EM + P TC ++++LC+ GR
Sbjct: 386 CAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGR 437
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 120/238 (50%), Gaps = 3/238 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G+ KM+ + M + D +Y+I + +C GK A+K+ ++
Sbjct: 157 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLL 216
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+ V+ Y +I A + GVD A+++ EM G +P + T NT+I+ +C+ G V
Sbjct: 217 SDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 276
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLL 321
A+ ++ + KGC PDVI+Y+ R L K E L +M P + TY +L+
Sbjct: 277 RAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 336
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R G + + K M+E G +PD ++Y+ L+ A +G LD+A ++ E M + G
Sbjct: 337 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 394
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 169/375 (45%), Gaps = 17/375 (4%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSIPNHATFRIMFKRYVTAHLVNE 85
F+ T TYN +I L + DL+ ++ ++ DN P T+ I+ + + V+E
Sbjct: 185 FSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQ--PTVITYTILIEATMLEGGVDE 242
Query: 86 AMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI 144
A+ +++ GLK D +Y ++ +C+ V A E+ +N+ G
Sbjct: 243 ALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMI----RNLELKGCEP--DVIS 296
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN++LR W + + +M ++ +YSI + +C+ GK +A+ L K MK
Sbjct: 297 YNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMK 356
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+KG+ D +Y+ +I A +D A+ M GC P +V NTV+ LC+NG+
Sbjct: 357 EKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKAD 416
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL----EKPREILGLFDRMIESGIRPKMDTYVML 320
+A + ++ + GC P+ +Y+ F L +K R L + M+ +GI P TY +
Sbjct: 417 QALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA-LHMILEMVSNGIDPDEITYNSM 475
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ R G + F + M P YN ++ ++ A + M G
Sbjct: 476 ISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNG- 534
Query: 381 SAKPREELGTKLVQG 395
+P E T L++G
Sbjct: 535 -CRPNETTYTVLIEG 548
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 98/228 (42%), Gaps = 37/228 (16%)
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVV---------------------------------- 213
C+SG +++ L + M +KG DV+
Sbjct: 96 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQPDVF 155
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
AYN +I +D A RV MR P VT N +I LC G++ A VL ++
Sbjct: 156 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQL 215
Query: 274 PKKGCVPDVITYHCFFRC--LEKP-REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
C P VITY LE E L L D M+ G++P M TY ++R + G +
Sbjct: 216 LSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMV 275
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
F + + +E GC PD +YN L+ AL+++G + K +MF++
Sbjct: 276 DRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 323
>gi|449494995|ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Cucumis sativus]
Length = 488
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 186/410 (45%), Gaps = 27/410 (6%)
Query: 4 LSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
L + +DWK AL F W E+ F HT D Y+ +ID LGK + ++ MK+ +
Sbjct: 80 LQRFKDDWKSALGVFRWAESLSGFKHTPDLYDILIDTLGKTKQLVKMRGMLEEMKE--AR 137
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQE 122
+ T +R+ A A+ F+ L+ +GL+ N L+D LC+ K V +A++
Sbjct: 138 LVTLDTVAKAMRRFAGAGQWENAVRIFDDLETYGLEKNTESMNVLLDTLCKEKKVEKARQ 197
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ ++ + +NM + GW K++ + EEM G + SYS
Sbjct: 198 MYLELKSHIAPNA-------NTFNMFIHGWCKVNKIDEAHWTLEEMKGYGHRPCVISYST 250
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ C K +L EM +G +V+ Y T++ ++ SE + A+++ M+ G
Sbjct: 251 IILFYCHRCNFNKVYELLDEMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAG 310
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVL-AEMPKKGCVPDVITYHCFFRCL-EKPRE--I 298
+P + N +I L G+VREA V EMP K +P+ TY+ + RE
Sbjct: 311 YEPDTLFYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYNSMIAMYCRRAREEKA 370
Query: 299 LGLFDRMIES-GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL----GCSPDEFAYN 353
+ L + M +S +P + TY LL+ R G + + + ++E+ S D Y+
Sbjct: 371 MKLLEEMQKSEHCKPDVQTYYPLLKSCFRTG--KTDYDLSNLLDEMINKHHLSLDISTYS 428
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGLSAKPR----EELGTKLVQGGLDG 399
L+ L D A + E+M ++ + KPR + L + Q +DG
Sbjct: 429 LLIHGLCRANKCDWAYQLFEKMISQDI--KPRYLTCQLLLDEFKQKNMDG 476
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 194/442 (43%), Gaps = 61/442 (13%)
Query: 7 YANDWKRALEFFNWVETDCHFTH--TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
++N AL F+WV T+ T+ ++ +I ILGK + +L+ ++++ I
Sbjct: 132 FSNKCDLALAVFHWVRTNNSNTNLFSSSAIPVIIKILGKAGRVSSAASLLLALQNDGVHI 191
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELC 124
+A + + Y ++ +A+ FNK+ + G CN L Y V+
Sbjct: 192 DVYA-YTCLINAYSSSGRYRDAVNLFNKMQQDG-------CN--PTLITYNVVLNVYGKM 241
Query: 125 FGENKNVGFSGLVEMNKTK-------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
NV + LVE +++ YN ++ + S + + +++M G D
Sbjct: 242 GMPWSNV--TALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDK 299
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG-------------- 223
+Y+ +D+ KS +P +A+K+ +EM+ G V YN++I A
Sbjct: 300 VTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQ 359
Query: 224 -VSEGV--------------------DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
V +G+ DFA++V+ EMR +GC+P++ T N +IK+ G+
Sbjct: 360 MVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGK 419
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVM 319
E V ++ C PD++T++ + ++ G+F M +G + DT+
Sbjct: 420 FAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNT 479
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L+ + R G V+K M E G PD YNA++ AL G+ + + K EM +
Sbjct: 480 LISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEM--ED 537
Query: 380 LSAKPREELGTKLVQGGLDGEQ 401
KP E + L+ +G++
Sbjct: 538 GRCKPNELSYSSLLHAYANGKE 559
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 178/376 (47%), Gaps = 21/376 (5%)
Query: 11 WKRALEFFNWVETD-CHFTHTTDTYNSVIDILGKFFEFDLSWN----LIHRMKDNPSSIP 65
++ A+ FN ++ D C+ T TYN V+++ GK + W+ L+ M+ + P
Sbjct: 209 YRDAVNLFNKMQQDGCN--PTLITYNVVLNVYGKM---GMPWSNVTALVEAMRSRGVA-P 262
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ + L EA+ F ++ G D+V+Y L+D + + EA ++
Sbjct: 263 DLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKV- 321
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
E + GFS + YN ++ + K + + +M +G+ D+ +Y+ +
Sbjct: 322 LQEMEANGFSP-----TSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLL 376
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
K+GK A++++ EM+ G K ++ +N +I+ G M+V+ +++ C
Sbjct: 377 SGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCS 436
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGL 301
P +VT NT++ + +NG + + EM + G V + T++ + + + +
Sbjct: 437 PDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAV 496
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
+ M+E+G+ P + TY +L R G V +ME+ C P+E +Y++L+ A +
Sbjct: 497 YKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYAN 556
Query: 362 KGMLDMARKYDEEMFA 377
++ + EE+++
Sbjct: 557 GKEIERMNAFAEEIYS 572
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 131/295 (44%), Gaps = 11/295 (3%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F DT+N++I + FD + + M + +P+ +T+ + L ++
Sbjct: 470 FVAERDTFNTLISAYSRCGSFDQAMAVYKSMLE-AGVVPDLSTYNAVLAALARGGLWEQS 528
Query: 87 MGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
++++ K +E+SY +L+ A K + F E +SG VE + +
Sbjct: 529 EKVLAEMEDGRCKPNELSYSSLLHAYANGKEIERMN--AFAEEI---YSGSVETHAVLLK 583
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
++L K + + E+ +RG+ D+ + + + I + KA ++ M +
Sbjct: 584 TLVLVNS-KSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHE 642
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+ YN+++ SE + + RE+ E G +P ++ NTVI C NGR++E
Sbjct: 643 TRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKE 702
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTY 317
A + +EM VPDV+TY+ F E + + MI+ G +P +TY
Sbjct: 703 ASRIFSEMKDSALVPDVVTYNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQNTY 757
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 163/374 (43%), Gaps = 32/374 (8%)
Query: 11 WKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
++ A+ F ++ + FT TYN+++D+ GK + ++ M+ N S P T+
Sbjct: 280 YEEAVHLFQQMKLEG-FTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFS-PTSVTY 337
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENK 129
+ Y L+ EA+ ++ G+K +V +Y L+ + A ++ F E +
Sbjct: 338 NSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQV-FLEMR 396
Query: 130 NVG-------FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
VG F+ L++M+ RG F + + ++++ D+ +++
Sbjct: 397 AVGCKPNICTFNALIKMHGN-------RGKF-----AEMMKVFDDIKLCNCSPDIVTWNT 444
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ + ++G + ++KEMK+ G + +NT+I A D AM VY+ M E G
Sbjct: 445 LLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAG 504
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI--LG 300
P + T N V+ L G ++ VLAEM C P+ ++Y +EI +
Sbjct: 505 VVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYANGKEIERMN 564
Query: 301 LFDRMIESGIRPKMDTYVMLLRKF----GRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
F I SG ++T+ +LL+ + L + ++ G SPD NA++
Sbjct: 565 AFAEEIYSG---SVETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNAML 621
Query: 357 DALIDKGMLDMARK 370
K M+ A +
Sbjct: 622 SIYGRKQMVAKAHE 635
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ + + + K E E+ ++G+ D SY+ + C++G+ +A +++ EMK
Sbjct: 652 YNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMK 711
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+ DVV YNT I A+ V R M + GC+P T N+++ C+ +
Sbjct: 712 DSALVPDVVTYNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDWYCKLDQRH 771
Query: 265 EA 266
EA
Sbjct: 772 EA 773
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 164/352 (46%), Gaps = 10/352 (2%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+N +I L + S L++++ S PN T I + + ++NEA+ +
Sbjct: 218 AFNKLIHTLCRKGHVQESERLLNKVLKRGVS-PNLFTVNIFIQGFCQRAMLNEAIRLLDG 276
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ D ++Y L+ LC+ V+EA+ + N G+ YN I+ G+
Sbjct: 277 VGRGLTPDVITYNTLICGLCKNFKVVEAEHY-LRKMVNEGYEP-----DGFTYNSIIDGY 330
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K+ + + +G V D +Y ++ +C+ G +A+ ++ E +KG+K ++
Sbjct: 331 CKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNL 390
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V NT+++ + + A+++ EM E GC P + T N VI LC+ G V +A ++ +
Sbjct: 391 VLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVID 450
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
KG +PDV T++ K ++ + + DRM G+ P + TY +L + G
Sbjct: 451 AIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGK 510
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
V +K M E GC P+ YN L ++ ++ A EEM KGL+
Sbjct: 511 YEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLT 562
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 169/398 (42%), Gaps = 58/398 (14%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
Y + +ALE FN V+ + F HT TY +I+ LG EF+ ++ + N +
Sbjct: 16 YQKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLL 75
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCF 125
+ + Y + EA+ F ++D F + V SY +++ L EY++ +A ++
Sbjct: 76 EGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKV-- 133
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
+ M +G+V D+++++I M
Sbjct: 134 ---------------------------------------YMRMRDKGIVPDVYTFTIRMK 154
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
C++ +P A +L M +G + VAY TVI A ++ EM +G P
Sbjct: 155 SFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICP 214
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRM 305
++ N +I LC G V+E+ +L ++ K+G P++ T + F + + R +L R+
Sbjct: 215 DIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQ-RAMLNEAIRL 273
Query: 306 IES---GIRPKMDTYVMLLRKFGRWGFLRPVFVV-----WKKMEELGCSPDEFAYNALVD 357
++ G+ P + TY L+ G + VV +KM G PD F YN+++D
Sbjct: 274 LDGVGRGLTPDVITYNTLI-----CGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIID 328
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
GM+ A + + KG P E L+ G
Sbjct: 329 GYCKLGMMQNADQILRDGAFKGFV--PDESTYCSLING 364
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 159/355 (44%), Gaps = 16/355 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNP--SSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
TYNS+ID + + + N ++D +P+ +T+ + ++ A+ F
Sbjct: 322 TYNSIID---GYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVF 378
Query: 91 NKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
N+ E GLK + CN LV L + +++A +L E G S + YN+++
Sbjct: 379 NEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKL-MNEMSENGCSPDIW-----TYNLVI 432
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G K+ + +G + D+ +++ +D CK K A+++ M G+
Sbjct: 433 NGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVS 492
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
DV+ YN+++ + + + M ++ M E GC P+++T N + + C+ +V EA +
Sbjct: 493 PDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNL 552
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIES-GIRPKMDTYVMLLRKFG 325
+ EM KG PDV+ + + ++ G LF R+ E + TY +++ F
Sbjct: 553 IEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFA 612
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ ++ KM E G SPD + Y ++D G ++ + KGL
Sbjct: 613 GKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGL 667
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 140/337 (41%), Gaps = 52/337 (15%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N++ID K + D + ++ RM ++ S P+ T+ + A + MGTF
Sbjct: 462 TFNTLIDGYCKKLKLDNAIEIVDRMWNHGVS-PDVITYNSILNGLCKAGKYEDVMGTFKL 520
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G + + ++Y L ++ C+ + V EA N+I
Sbjct: 521 MMEKGCVPNIITYNILTESFCKARKVEEA------------------------LNLI--- 553
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK-GIKM 210
EEM +G+ D+ ++ M C +G A +L+K + ++
Sbjct: 554 --------------EEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSH 599
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
+ YN +I A ++ A +++ +M E G P T +I C+ G + Y+ L
Sbjct: 600 TIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFL 659
Query: 271 AEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
+KG +P + T+ CL + E +G+ M+ GI P++ V + + +
Sbjct: 660 LVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEV---VNTIFEADKK 716
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
P VV M++ + FAY L D + DK +
Sbjct: 717 EVAAPKIVVENLMKKGHIT--YFAYEILHDGIRDKKL 751
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 140/325 (43%), Gaps = 16/325 (4%)
Query: 60 NPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLD-EFGLKDEV-SYCNLVDALCEYKHV 117
+P+ +P H + +++ +A+ FN + E G K + +Y +++ L +
Sbjct: 2 SPALLPKHVAAVVKYQKNPL-----KALEIFNSVKKEDGFKHTLLTYKGMIEKL-GFHGE 55
Query: 118 IEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
EA E E + +GL+E +Y +R + + + + +E MD +
Sbjct: 56 FEAMEEVLAETRMNIDNGLLE----GVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSV 111
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
SY+ M+I+ + +A K+Y M+ KGI DV + +++ + A R+
Sbjct: 112 QSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNN 171
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP-- 295
M GC+ S V TVI E EA+ + EM G PD++ ++ L +
Sbjct: 172 MPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGH 231
Query: 296 -REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
+E L +++++ G+ P + T + ++ F + L + + G +PD YN
Sbjct: 232 VQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGR-GLTPDVITYNT 290
Query: 355 LVDALIDKGMLDMARKYDEEMFAKG 379
L+ L + A Y +M +G
Sbjct: 291 LICGLCKNFKVVEAEHYLRKMVNEG 315
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C D A + F V+ F+HT TYN +I+ +++ L ++M +N S P
Sbjct: 576 CDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFS-P 634
Query: 66 NHATFRIMFKRYVTAHLVNEAMG-TFNKLDEFGLKDEVSYCNLVDALCEYKHVIEA 120
+ T+R+M + +N K+++ + ++ +++ LC + V EA
Sbjct: 635 DSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEA 690
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 147/305 (48%), Gaps = 22/305 (7%)
Query: 91 NKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI----- 144
N++D FG+ N L+++LC H+ + S L +M K I
Sbjct: 110 NQMDLFGVAHNDYTLNILINSLCRLSHI------------HFAVSVLSKMFKLGIQPDSV 157
Query: 145 -YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+ ++ G + E + EM R + + +++I +D++CK G +A +++ M
Sbjct: 158 TFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETM 217
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
+KG++ ++ YN ++ + ++ A +V+ M GC PSV + + +I C++ R+
Sbjct: 218 TEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRI 277
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVML 320
EA A+L +M +K +P+ +TY+ + L +L LF +M SG+ P + TY +L
Sbjct: 278 DEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSIL 337
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
L + G L + M+E PD YN L+ + G L++A++ ++FA G+
Sbjct: 338 LDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGI 397
Query: 381 SAKPR 385
R
Sbjct: 398 RPSVR 402
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 171/362 (47%), Gaps = 17/362 (4%)
Query: 28 THTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAM 87
H T N +I+ L + + +++ +M P+ TF + + EA+
Sbjct: 118 AHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQ-PDSVTFTTLINGLCNEGRIKEAV 176
Query: 88 GTFNKL-DEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYN 146
FN++ + + V++ LVD LC+ V EA+ C E VE N YN
Sbjct: 177 ELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEAR--CVFETMT---EKGVEPN-IYTYN 230
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++ G+ + +E M +G +HSYSI ++ CKS + +A L +M +K
Sbjct: 231 ALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEK 290
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
+ + V YNT+++ + + + A ++++M G P++ T + ++ LC++G + EA
Sbjct: 291 ELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEA 350
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRC------LEKPREILGLFDRMIESGIRPKMDTYVML 320
+L M ++ PD++ Y+ + LE +E LF ++ +GIRP + TY ++
Sbjct: 351 LKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKE---LFSKLFANGIRPSVRTYNIM 407
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
++ + G + +++KME+ G PD +YN ++ + A + +EM +
Sbjct: 408 IKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRF 467
Query: 381 SA 382
SA
Sbjct: 468 SA 469
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 152/326 (46%), Gaps = 24/326 (7%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C K A+E FN + +T T+ ++D+L K + + M + P
Sbjct: 167 CNEGRIKEAVELFNEMAGRDAMPNTV-TFTILVDVLCKKGMVSEARCVFETMTEKGVE-P 224
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELC 124
N T+ + Y +N+A F + G V SY L++ C+ + + EA+ L
Sbjct: 225 NIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKAL- 283
Query: 125 FGENKNVGFSGLVEMNK------TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
L +M++ T YN +++G S + +E +++M G++ +L
Sbjct: 284 -----------LTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLR 332
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+YSI +D +CK G +A+KL M+++ ++ D+V YN +I+ + ++ ++ A ++ ++
Sbjct: 333 TYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKL 392
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKP 295
G +PSV T N +IK L + G EAY + +M G +PD +Y+ + + P
Sbjct: 393 FANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDP 452
Query: 296 REILGLFDRMIESGIRPKMDTYVMLL 321
+ L D M+ T+ MLL
Sbjct: 453 STAIQLIDEMVGRRFSADSSTFKMLL 478
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 5/216 (2%)
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ + K + V L +M G+ + N +I ++ + FA+ V +M ++G
Sbjct: 92 FLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLG 151
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REIL 299
QP VT T+I LC GR++EA + EM + +P+ +T+ L K E
Sbjct: 152 IQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEAR 211
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+F+ M E G+ P + TY L+ + + V++ M GC+P +Y+ L++
Sbjct: 212 CVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGY 271
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+D A+ +M K L P L+QG
Sbjct: 272 CKSRRIDEAKALLTQMSEKELI--PNTVTYNTLMQG 305
>gi|15221377|ref|NP_177613.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207514|sp|Q9SSF9.1|PP123_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74750
gi|5882748|gb|AAD55301.1|AC008263_32 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332197508|gb|AEE35629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 855
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 176/398 (44%), Gaps = 51/398 (12%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
+++ AL FF W++ F H TY +++ LG+ +F L+ M + PN
Sbjct: 337 DNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRD-GCKPNTV 395
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE 127
T+ + Y A+ + EAM FN++ E G + D V+YC L+D I A+
Sbjct: 396 TYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLID--------IHAK------ 441
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
+G +++ + ++ M + G+ D +YS+ ++ +
Sbjct: 442 ------AGFLDI---------------------AMDMYQRMQEAGLSPDTFTYSVIINCL 474
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
K+G A +L+ EM +G ++V +N +I + + A+++YR+M+ G QP
Sbjct: 475 GKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDK 534
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGL---FDR 304
VT + V+++L G + EA V AEM +K VPD Y K + +
Sbjct: 535 VTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQA 594
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID-KG 363
M+++G+RP + T LL F R + + + + M LG P Y L+ D +
Sbjct: 595 MLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARS 654
Query: 364 MLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
DM + ++ A +S P K+ G DG++
Sbjct: 655 NFDMG--FCGQLMA--VSGHPAHMFLLKMPPAGPDGQK 688
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 144/308 (46%), Gaps = 28/308 (9%)
Query: 102 VSYCNLVDALCEYKHVIEAQEL------------------CFGENKNVGFSGLVEMNKTK 143
V+Y L+ LC + EA + C E K + L EM +K
Sbjct: 286 VTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSK 345
Query: 144 -------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKA 196
YN+++ G K+ G +EM+++G ++ +YS + C++G A
Sbjct: 346 GCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDA 405
Query: 197 VKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKL 256
+ +M KG M+ YN +I A+G +D AMR+ +EM+ GC+P + T NT+I
Sbjct: 406 RAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYH 465
Query: 257 LCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPK 313
LC N ++ EA + + ++G V + ITY+ L +E L L + M+ G
Sbjct: 466 LCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLD 525
Query: 314 MDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDE 373
+ +Y L++ + G + ++ ++M G P+ F+YN L++ L G + A + +
Sbjct: 526 VVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSK 585
Query: 374 EMFAKGLS 381
EM +GL+
Sbjct: 586 EMLNQGLT 593
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 113/273 (41%), Gaps = 34/273 (12%)
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
+ YN +L + + M + V ++ + +C+ G+ A+ L +
Sbjct: 146 RSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALALLRG 205
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M + G D V Y TVI A+ GV A + EM MGC V T N V+ LC G
Sbjct: 206 MARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGH 265
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE------ILG---------------- 300
VREA ++ M GC P V+TY R L + R+ +LG
Sbjct: 266 VREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNTVIRG 325
Query: 301 ------------LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
L++ M G P + TY +L+ + G + +MEE GC+P+
Sbjct: 326 CLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPN 385
Query: 349 EFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
Y+ L+ + GM D AR ++M AKG S
Sbjct: 386 IVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFS 418
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 122/251 (48%), Gaps = 16/251 (6%)
Query: 83 VNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
++EAM ++ G K ++ +Y ++ LC + EA+ + FG N+ G+V
Sbjct: 437 LDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHI-FG---NLLEEGVVANGI 492
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
T YN ++ W + EM G D+ SY+ + +CK G +++ L +
Sbjct: 493 T--YNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLE 550
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
EM KGIK + +YN +I + + V A+ + +EM G P +VT NT+I LC+ G
Sbjct: 551 EMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVG 610
Query: 262 RVREAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPKMD 315
A +L ++P + PD++TY HC R L+ +L D+ + GI P
Sbjct: 611 WTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLL---DKAVSGGIVPNER 667
Query: 316 TYVMLLRKFGR 326
T+ M+++ F R
Sbjct: 668 TWGMMVQNFVR 678
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 150/375 (40%), Gaps = 15/375 (4%)
Query: 13 RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
RAL + + T + +YN+V+ L + + L++R P TF +
Sbjct: 127 RALHLLDQMPRRFAVTPSFRSYNAVLSTLARA-DCHADALLLYRRMLRDRVPPTTFTFGV 185
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNV 131
+ +A+ + G + D V Y ++ AL V EA L E +
Sbjct: 186 AARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATL-LDEMLLM 244
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
G + V +N ++ G + + + M G + +Y + +C++
Sbjct: 245 GCAADV-----NTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTR 299
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
+ +A + + + ++VV NTVIR + A +Y M GC P V T N
Sbjct: 300 QADEAYAMLGRVPE----VNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYN 355
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIES 308
++ LC+ GR A +L EM +KGC P+++TY + + + D+M
Sbjct: 356 ILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAK 415
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G Y ++ G+ G L + ++M+ GC PD YN ++ L + +D A
Sbjct: 416 GFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEA 475
Query: 369 RKYDEEMFAKGLSAK 383
+ +G+ A
Sbjct: 476 EHIFGNLLEEGVVAN 490
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 147/336 (43%), Gaps = 10/336 (2%)
Query: 54 IHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALC 112
++ M + P+ T+ I+ A+ ++++E G V+Y L+ + C
Sbjct: 338 LYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFC 397
Query: 113 EYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRG 172
+A+ + + GFS MN ++ YN I+ K + +EM +G
Sbjct: 398 RNGMWDDARAM-LDQMSAKGFS----MN-SQGYNGIIYALGKDGKLDEAMRLVQEMKSQG 451
Query: 173 VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM 232
D+ +Y+ + +C + + +A ++ + ++G+ + + YNT+I A+ S +
Sbjct: 452 CKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGL 511
Query: 233 RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
R+ EM GC VV+ N +IK LC+ G V + +L EM KG P+ +Y+ L
Sbjct: 512 RLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINEL 571
Query: 293 ---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE 349
K R+ L L M+ G+ P + TY L+ + G+ + +K+ PD
Sbjct: 572 CKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDI 631
Query: 350 FAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
YN L+ +LD A ++ + G+ R
Sbjct: 632 VTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNER 667
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 119/231 (51%), Gaps = 3/231 (1%)
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
K S + + + +EM +G D+ +Y++ ++ +C+ G+ A++ K + G + + V
Sbjct: 4 KRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTV 63
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
+YN V++ + +E + A + EM + GC P+VVT N +I LC G V A VL ++
Sbjct: 64 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 123
Query: 274 PKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
PK GC P+ ++Y+ K +++ + D M+ G P + +Y LL R G +
Sbjct: 124 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEV 183
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ ++++ GC+P +YN ++D L G A + EM +KGL
Sbjct: 184 DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQ 234
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 160/338 (47%), Gaps = 11/338 (3%)
Query: 50 SWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLV 108
+ L+ M+D + P+ T+ ++ V++A+ L +G + + VSY ++
Sbjct: 11 AMKLLDEMRDKGCT-PDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 69
Query: 109 DALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM 168
LC + +A+EL GE G V +NM++ + E E++
Sbjct: 70 KGLCTAERWEDAEEL-MGEMGQKGCPPNV-----VTFNMLISFLCRKGLVEPALEVLEQI 123
Query: 169 DKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV 228
K G + SY+ + CK K KA+ M +G D+V+YNT++ A+ S V
Sbjct: 124 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEV 183
Query: 229 DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
D A+ + ++++ GC P +++ NTVI L + G+ +EA +L EM KG PD+ITY
Sbjct: 184 DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 243
Query: 289 FRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
L ++ + + F ++ + GIRP Y ++ + ++ M GC
Sbjct: 244 AAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGC 303
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAK 383
P+E Y L++ L +G++ AR +E+ ++G+ K
Sbjct: 304 MPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRK 341
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 3/197 (1%)
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
CK +A+KL EM+ KG D+V YN V+ + VD A+ + + GC+P+
Sbjct: 3 CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF--FRCLEKPRE-ILGLFDR 304
V+ N V+K LC R +A ++ EM +KGC P+V+T++ F C + E L + ++
Sbjct: 63 VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
+ + G P +Y LL F + + M GC PD +YN L+ AL G
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182
Query: 365 LDMARKYDEEMFAKGLS 381
+D+A + ++ KG +
Sbjct: 183 VDVAVELLHQLKDKGCA 199
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 90/204 (44%), Gaps = 9/204 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C +A+ F + + + + +YN+++ L + E D++ L+H++KD + P
Sbjct: 143 CKQKKMDKAMAFLDLMVSRGCYPDIV-SYNTLLTALCRSGEVDVAVELLHQLKDKGCA-P 200
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
++ + A EA+ N++ GL+ D ++Y + LC + +A
Sbjct: 201 VLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR-A 259
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
FG+ +++G T +YN I+ G K + + M G + + +Y+I +
Sbjct: 260 FGKVQDMGIR-----PNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 314
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGI 208
+ + G +A L E+ +G+
Sbjct: 315 EGLAYEGLIKEARDLLDELCSRGV 338
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 125/230 (54%), Gaps = 10/230 (4%)
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
F +S GK M K G+ D +++ ++ +C GK +AV+L+ EM K+G + +V
Sbjct: 146 FSVSVLGK-------MFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNV 198
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
++Y TVI + + A+ V+++M + GC+P+VVT +T+I LC++ V +A L+E
Sbjct: 199 ISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSE 258
Query: 273 MPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M ++G P+V TY+ F L + E LF M+ + P T+ +L+ + G
Sbjct: 259 MVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGM 318
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ +V++ M E G PD YNAL+D + +++ A+K E M KG
Sbjct: 319 VSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKG 368
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 148/315 (46%), Gaps = 24/315 (7%)
Query: 91 NKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI----- 144
N++D F + V N L++ LC HV + S L +M K I
Sbjct: 117 NQMDLFRVTHNVYSLNILINCLCRLNHV------------DFSVSVLGKMFKLGIHPDAI 164
Query: 145 -YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+N ++ G + E + EM KRG ++ SY+ ++ +CK+G AV ++K+M
Sbjct: 165 TFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKM 224
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
++ G K +VV Y+T+I ++ V+ AM EM E G P+V T N+++ C G++
Sbjct: 225 EQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQL 284
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVML 320
EA + EM + +P+ +T+ L K E +F+ M E G+ P + TY L
Sbjct: 285 NEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNAL 344
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + + V++ M GC+P +YN L++ +D A+ EM+ K L
Sbjct: 345 MDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKAL 404
Query: 381 SAKPREELGTKLVQG 395
+ P + L+QG
Sbjct: 405 N--PDTVTYSTLMQG 417
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 177/416 (42%), Gaps = 47/416 (11%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C K A+E FN + H + +Y +VI+ L K ++ ++ +M+ N P
Sbjct: 174 CNEGKIKEAVELFNEMVKRGHEPNVI-SYTTVINGLCKTGNTSMAVDVFKKMEQNGCK-P 231
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELC 124
N T+ + LVN+AM +++ E G+ V +Y ++V C + EA L
Sbjct: 232 NVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRL- 290
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F E G M T + +++ G K + R +E M ++GV D+ +Y+ M
Sbjct: 291 FKE-----MVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALM 345
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D C +A K+++ M +KG +YN +I S +D A + EM
Sbjct: 346 DGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALN 405
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREI 298
P VT +T+++ LC+ GR +EA + EM G P+++TY C L++ ++
Sbjct: 406 PDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKL 465
Query: 299 LG--------------------------------LFDRMIESGIRPKMDTYVMLLRKFGR 326
L LF ++ G RP + TY ++++ +
Sbjct: 466 LKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLK 525
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
G + +++KME+ G P+ +YN ++ + A + +EM K S
Sbjct: 526 EGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSV 581
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 5/203 (2%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
V L +M + +V + N +I + VDF++ V +M ++G P +T N +I
Sbjct: 112 VVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALIN 171
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRP 312
LC G+++EA + EM K+G P+VI+Y L K + +F +M ++G +P
Sbjct: 172 GLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKP 231
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
+ TY ++ + + +M E G P+ F YN++V + G L+ A +
Sbjct: 232 NVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLF 291
Query: 373 EEMFAKGLSAKPREELGTKLVQG 395
+EM G P T LV G
Sbjct: 292 KEMV--GRDVMPNTVTFTILVDG 312
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 168/380 (44%), Gaps = 12/380 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C K+A EF +ET TYN++I +F + + MKD P
Sbjct: 227 CKEGKLKKAKEFIGHMET-LGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLE-P 284
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ + EA G K+ E GL + V+Y L+D C + +A
Sbjct: 285 DCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKA---- 340
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+ + G+ M YN+ + F G +EM ++G++ D +++I +
Sbjct: 341 YAYRDEMISKGI--MASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILI 398
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ C+ G +A L EM KGI+ +V Y ++I +G + A ++ ++++ G
Sbjct: 399 NGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLL 458
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGL 301
P ++ N +I C NG + A+ +L EM +PD ITY+ + C E K E L
Sbjct: 459 PDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQL 518
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
D M GI+P +Y L+ + + G ++ F V +M G P YNAL+ L
Sbjct: 519 LDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCK 578
Query: 362 KGMLDMARKYDEEMFAKGLS 381
+ A + +EM +KG++
Sbjct: 579 NQEGEHAEELLKEMVSKGIT 598
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 157/358 (43%), Gaps = 28/358 (7%)
Query: 29 HTTD--TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
H+ D T + I +L + S NLI R+ +P+ T R +F A
Sbjct: 89 HSLDLATSSLAICVLYRLPSPKPSINLIQRLILSPT-----CTNRTIFDELALAR----- 138
Query: 87 MGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYN 146
D K + + LV A CE K EA E CF K GF +E N
Sbjct: 139 -------DRVDAKTTLIFDLLVRAYCELKKPNEALE-CFYLIKEKGFVPNIE-----TCN 185
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
+L + K++ + EM + + L++++I ++++CK GK KA + M+
Sbjct: 186 QMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETL 245
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
G+K +VV YNT+I + A +++ M++ G +P T N+ I LC+ GR+ EA
Sbjct: 246 GVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEA 305
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLF---DRMIESGIRPKMDTYVMLLRK 323
++ +M + G VP+ +TY+ ++ + D MI GI + TY + +
Sbjct: 306 SGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHA 365
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G + + K+M E G PD +N L++ G A +EM KG+
Sbjct: 366 LFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQ 423
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 167/395 (42%), Gaps = 16/395 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSI 64
C ALE F ++ + F +T N ++ + K ++W L M + N S
Sbjct: 157 CELKKPNEALECFYLIK-EKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRS- 214
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
+ TF IM + +A ++ G+K + V+Y ++ C + + +
Sbjct: 215 -SLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHC-LRGKFQRARV 272
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F K+ G YN + G K + +M + G+V + +Y+
Sbjct: 273 IFQTMKDKGLEP-----DCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNAL 327
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D C G KA EM KGI +V YN I A+ + + A + +EMRE G
Sbjct: 328 IDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGM 387
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILG 300
P VT N +I C G + A+ +L EM KG P ++TY L K +E
Sbjct: 388 MPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADA 447
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
LF ++ + G+ P + + L+ G + F + K+M+ + PDE YN L+
Sbjct: 448 LFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYC 507
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+G ++ AR+ +EM +G+ KP L+ G
Sbjct: 508 REGKVEEARQLLDEMKRRGI--KPDHISYNTLISG 540
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 128/276 (46%), Gaps = 14/276 (5%)
Query: 33 TYNSVIDIL---GKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
TYN I L G+ + D N+I M++ +P+ T I+ Y A G
Sbjct: 358 TYNLFIHALFMEGRMGDAD---NMIKEMREK-GMMPDAVTHNILINGYCRCGDAKRAFGL 413
Query: 90 FNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
+++ G++ V+Y +L+ L + + EA L F + + G + ++N +
Sbjct: 414 LDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADAL-FSKIQQEGL-----LPDIIVFNAL 467
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G + + +EMD V+ D +Y+ M C+ GK +A +L EMK++GI
Sbjct: 468 IDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGI 527
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
K D ++YNT+I + A RV EM G P+++T N +I+ LC+N A
Sbjct: 528 KPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEE 587
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDR 304
+L EM KG PD TY +E ++ G D+
Sbjct: 588 LLKEMVSKGITPDDSTYLSIIEAMETVDDLEGNDDK 623
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 150/317 (47%), Gaps = 16/317 (5%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PN TF + K +++A+ +KL G + +++SY L+D LC+ A +L
Sbjct: 155 PNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDL 214
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ LV+ N +Y+ I+ G K + + EM +G+ ++ +YS
Sbjct: 215 LRRVD-----GKLVQPNVV-MYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSAL 268
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ GK AV L+ +M + IK DV +N ++ S + +A+++ EM + G
Sbjct: 269 ISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQ 328
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCLEKPRE 297
P++VT ++++ LC+ RV +A A+L ++ +G P++ TY C LE R
Sbjct: 329 PPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARN 388
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
I F+ ++ G + TY+++ F + G + KMEE GC PD Y +
Sbjct: 389 I---FEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKL 445
Query: 358 ALIDKGMLDMARKYDEE 374
+L KG DMA K E
Sbjct: 446 SLFKKGENDMAEKLHRE 462
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 116/253 (45%), Gaps = 6/253 (2%)
Query: 133 FSGLVEMNKTKI---YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
F+ L+ N T +N IL K + ++M+ RG+ +L + +I ++ C+
Sbjct: 75 FNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQ 134
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
G A ++ ++ K G + + + T+I+ + + + A+ + ++ +G Q + ++
Sbjct: 135 LGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQIS 194
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFD---RMI 306
T+I LC+ G R A +L + K P+V+ Y + K + + FD M+
Sbjct: 195 YGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMV 254
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
GI P + TY L+ F G L+ ++ KM PD + +N LVD G +
Sbjct: 255 SKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKIS 314
Query: 367 MARKYDEEMFAKG 379
A K +EM +G
Sbjct: 315 YALKLVDEMHDRG 327
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 97/203 (47%), Gaps = 5/203 (2%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
AV L+ + ++ + +N ++ ++ S+ + + ++M G +P++V CN +I
Sbjct: 71 AVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILIN 130
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRP 312
C+ G + A++V A++ K G P+ IT+ + CL+ + + L D+++ G +
Sbjct: 131 CFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQF 190
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
+Y L+ + G R + ++++ P+ Y+ ++D + ++ A
Sbjct: 191 NQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLY 250
Query: 373 EEMFAKGLSAKPREELGTKLVQG 395
EM +KG+S P + L+ G
Sbjct: 251 SEMVSKGIS--PNVVTYSALISG 271
>gi|15222950|ref|NP_172835.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174769|sp|Q9LMH5.1|PPR42_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g13800
gi|8778410|gb|AAF79418.1|AC068197_28 F16A14.3 [Arabidopsis thaliana]
gi|332190949|gb|AEE29070.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 883
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 172/385 (44%), Gaps = 62/385 (16%)
Query: 33 TYNSVIDILGKFFEFDLSW----NLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
T+N VI+ L E D + +L H+ ++N +S M K + A ++ A
Sbjct: 503 THNMVIEGLIDAGELDKAEAFYESLEHKSRENDAS---------MVKGFCAAGCLDHAFE 553
Query: 89 TFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
F +L EF L V Y L +LC K I + +G VE K+ +Y +
Sbjct: 554 RFIRL-EFPLPKSV-YFTLFTSLCAEKDYISKAQDLLDRMWKLG----VEPEKS-MYGKL 606
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ W +++ K REF+E + + +V DL +Y+I ++ C+ +P +A L+++MK++ +
Sbjct: 607 IGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDV 666
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
K DVV Y+ ++ + D + + REM P VV +I C +++ YA
Sbjct: 667 KPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYA 719
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREILG---------------------------- 300
+ +M ++ VPDV+TY + KP L
Sbjct: 720 LFKDMKRREIVPDVVTYTVLLK--NKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDL 777
Query: 301 -----LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
+FD+MIESG+ P Y L+ + G+L+ +++ +M E G PD Y AL
Sbjct: 778 GEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTAL 837
Query: 356 VDALIDKGMLDMARKYDEEMFAKGL 380
+ G + A K +EM KG+
Sbjct: 838 IAGCCRNGFVLKAVKLVKEMLEKGI 862
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 153/390 (39%), Gaps = 51/390 (13%)
Query: 47 FDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYC 105
FD + ++ R + P+ + R + + + +G F +++ GL D +Y
Sbjct: 162 FDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYV 221
Query: 106 NLVDAL-------------------------CEYKHVIEAQELCFGENKNVGFSGLVEMN 140
+V AL Y + IE LC + ++ + L +
Sbjct: 222 LVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEG--LCLNQMTDIAYFLLQPLR 279
Query: 141 KTKI----------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS 190
I Y ++RG +M+K G+ D++ YS ++ K+
Sbjct: 280 DANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKN 339
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTC 250
KAV ++ +M KK +++ V +++++ A +++E RE V
Sbjct: 340 MNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCY 399
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPREILGLFDRMIE- 307
N L + G+V EA + EM KG PDVI Y CL+ + FD MIE
Sbjct: 400 NVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQG--KCSDAFDLMIEM 457
Query: 308 --SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
+G P + Y +L G + F K ME G P +N +++ LID G L
Sbjct: 458 DGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGEL 517
Query: 366 DMARKYDEEMFAKGLSAKPREELGTKLVQG 395
D A E F + L K RE +V+G
Sbjct: 518 DKA-----EAFYESLEHKSREN-DASMVKG 541
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 111/269 (41%), Gaps = 32/269 (11%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
I + IL+ + +M + + + ++E + + D Y++ D + K GK +A++L++EM
Sbjct: 363 IVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREM 422
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
KGI DV+ Y T+I + A + EM G P +V N + L NG
Sbjct: 423 TGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLA 482
Query: 264 REAYAVLAEMPKKGCVPDVITYH----------------CFFRCLE-KPRE--------- 297
+EA+ L M +G P +T++ F+ LE K RE
Sbjct: 483 QEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGF 542
Query: 298 -ILGLFDRMIESGIR-----PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFA 351
G D E IR PK + + ++ + +M +LG P++
Sbjct: 543 CAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSM 602
Query: 352 YNALVDALIDKGMLDMARKYDEEMFAKGL 380
Y L+ A + AR++ E + K +
Sbjct: 603 YGKLIGAWCRVNNVRKAREFFEILVTKKI 631
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 28/204 (13%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D KR +E F+ + ++T + Y + D+ + L MK +P+ T
Sbjct: 684 DMKREMEAFDVIPDVVYYTIMINRYCHLNDL-------KKVYALFKDMKRR-EIVPDVVT 735
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGEN 128
+ ++ K +L E + F +K +V Y L+D C+ + EA+ +
Sbjct: 736 YTVLLKNKPERNLSRE-------MKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRI----- 783
Query: 129 KNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
F ++E Y ++ KM + + + ++ M + GV D+ Y+ +
Sbjct: 784 ----FDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIA 839
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIK 209
C++G KAVKL KEM +KGIK
Sbjct: 840 GCCRNGFVLKAVKLVKEMLEKGIK 863
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 142/285 (49%), Gaps = 10/285 (3%)
Query: 83 VNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
++ A+ K+++ ++ D V Y ++D LC+YKH+ +A L F + + G V
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFAL-FNKMETKGIRPDVF--- 291
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
YN ++ W M +R + ++ ++S +D K GK +A KLY
Sbjct: 292 --TYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
EM K+ I D+ Y+++I + + +D A ++ M C P+VVT NT+IK C+
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE---ILGLFDRMIESGIRPKMDTYV 318
RV E + EM ++G V + +TY+ + L + + +F +M+ G+ P + TY
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
+LL ++G L VV++ +++ PD + YN +++ + G
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 165/354 (46%), Gaps = 17/354 (4%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
+N ++ + K +FDL +L RM++ S + ++ I+ + + A+ K+
Sbjct: 83 FNKLLSAIAKMKKFDLVISLGERMQNLRISYDLY-SYNILINCFCRRSQLPLALAVLGKM 141
Query: 94 DEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIYNMIL 149
+ G + D V+ +L++ C K + +A L +VEM T +N ++
Sbjct: 142 MKLGYEPDIVTLSSLLNGYCHSKRISDAVAL---------VDQMVEMGYKPDTVTFNTLI 192
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G F + + ++M +RG DL +Y ++ +CK G A+ L K+M+K I+
Sbjct: 193 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIE 252
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
DVV YNT+I + + +D A ++ +M G +P V T N++I LC GR +A +
Sbjct: 253 ADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRL 312
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGR 326
L+ M ++ P+V+T+ K +++ L+D MI+ I P + TY L+ F
Sbjct: 313 LSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
L +++ M C P+ YN L+ ++ + EM +GL
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 169/364 (46%), Gaps = 34/364 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +V++ L K + DL+ +L+ +M+ + + + +++A FNK
Sbjct: 222 TYGAVVNGLCKRGDIDLALSLLKKMEKGKIE-ADVVIYNTIIDGLCKYKHIDDAFALFNK 280
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGE-----NKNV-GFSGLV-------- 137
++ G++ +V +Y +L+ LC Y +A L N NV FS L+
Sbjct: 281 METKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGK 340
Query: 138 ---------EMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
EM K I Y+ ++ G+ + + +E M + ++ +Y+
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ CK+ + + ++L++EM ++G+ + V YNT+I+ + + D A +++++M G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG-- 300
P ++T + ++ LC+ G++ +A V + K PD+ TY+ + K ++
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGW 520
Query: 301 -LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
LF + G++P + Y ++ F R G ++++M+E G PD YN L+ A
Sbjct: 521 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRAR 580
Query: 360 IDKG 363
+ G
Sbjct: 581 LRDG 584
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 14/268 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+S+I+ D + ++ M + PN T+ + K + A V E M F +
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMI-SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + GL + V+Y L+ L + AQ++ F + + G + Y+++L G
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI-FKKMVSDGVPPDI-----ITYSILLDG 474
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K K +E + K + D+++Y+I ++ MCK+GK L+ + KG+K +
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534
Query: 212 VVAYNTVIRAV---GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
V+ Y T+I G+ E D ++REM+E G P NT+I+ +G +
Sbjct: 535 VIIYTTMISGFCRKGLKEEAD---ALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAE 591
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPR 296
++ EM G V D T L R
Sbjct: 592 LIKEMRSCGFVGDASTISMVINMLHDGR 619
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 3/176 (1%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A+ L+ EM + +V +N ++ A+ + D + + M+ + + + N +I
Sbjct: 64 AIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKP-REILGLFDRMIESGIRP 312
C ++ A AVL +M K G PD++T C K + + L D+M+E G +P
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 183
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
T+ L+ + +M + GC PD Y A+V+ L +G +D+A
Sbjct: 184 DTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLA 239
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 181/437 (41%), Gaps = 51/437 (11%)
Query: 7 YANDWKRALEFFNWVET--DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
+ N + AL F+++ T D ++ ILGK + +L+H ++ + +
Sbjct: 118 FNNKFDLALSLFDFIRTRNDRVSLLNGSVIAVIVSILGKTGRVSRAASLLHNLEADGFEV 177
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN------------------ 106
+ + + Y +A+ F K+ E G + + N
Sbjct: 178 DVYG-YTSLITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAILNVYGKMGMPWAKIIA 236
Query: 107 ---------LVDALCEYKHVI----------EAQELCFGENKNVGFSGLVEMNKTKIYNM 147
L LC Y +I EA +L F E K GF YN
Sbjct: 237 LVQDMKCHGLAPDLCTYNTLISCCRAGSLYEEALDL-FEEIKVAGFRP-----DAVTYNA 290
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
+L + K + E ++M+ + +Y+ + + G A+ L ++M KG
Sbjct: 291 LLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKG 350
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
IK DV Y T++ + + AM V+ EMR++GC+P++ T N +IK+ + G+ E
Sbjct: 351 IKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMV 410
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKF 324
V E+ C PD++T++ + E+ G+F+ M S P+ DT+ L+ +
Sbjct: 411 KVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAY 470
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
GR G +K+M E G SPD YNA++ L G+ + + K EM G KP
Sbjct: 471 GRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGG--CKP 528
Query: 385 REELGTKLVQGGLDGEQ 401
E + L+ +G +
Sbjct: 529 NEVTYSSLLHAYANGRE 545
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 167/387 (43%), Gaps = 36/387 (9%)
Query: 11 WKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
++ AL+ F ++ F TYN+++D+ GK + ++ +M+ N S P+ T+
Sbjct: 266 YEEALDLFEEIKV-AGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESN-SFRPSVVTY 323
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENK 129
+ YV L+ +A+ K+ + G+K +V +Y L+ A E+ F E +
Sbjct: 324 NSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEV-FEEMR 382
Query: 130 NVG-------FSGLVEM--NKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
VG F+ L++M ++ K M+ FK KC D+ ++
Sbjct: 383 KVGCKPNICTFNALIKMYGDRGKFEEMV--KVFKEIKVCKCS------------PDIVTW 428
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ + + ++G + +++EMK+ + +NT+I A G D AM Y+ M E
Sbjct: 429 NTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLE 488
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI-- 298
G P + T N V+ L G ++ VLAEM GC P+ +TY RE+
Sbjct: 489 AGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVER 548
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKF----GRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
+ I SG + T+ +LL+ + L + + + G SPD NA
Sbjct: 549 MNALAEEIYSGT---IKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRGISPDVTTSNA 605
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLS 381
++ K M+ A + M+ GL+
Sbjct: 606 MLSIYGRKKMVPKANEILNFMYESGLT 632
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 134/295 (45%), Gaps = 11/295 (3%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F DT+N++I G+ FD + RM + S P+ +T+ + L ++
Sbjct: 456 FAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVS-PDLSTYNAVLATLARGGLWEQS 514
Query: 87 MGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
++ + G K +EV+Y +L+ A + V L +SG ++ + +
Sbjct: 515 EKVLAEMKDGGCKPNEVTYSSLLHAYANGREVERMNALA-----EEIYSGTIKTHAVLLK 569
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
++L K+ + + E KRG+ D+ + + + I + KA ++ M +
Sbjct: 570 TLVLVNS-KVDLLVETERAFLEFRKRGISPDVTTSNAMLSIYGRKKMVPKANEILNFMYE 628
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G+ + + +YN+++ +E + +++RE+ + G +P V++ N VI C N + E
Sbjct: 629 SGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMMDE 688
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTY 317
A ++ EM VPDV+TY+ F E + + MI+ G +P +TY
Sbjct: 689 AKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFVEAIDVIRYMIKQGCKPNHNTY 743
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 113/263 (42%), Gaps = 20/263 (7%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAH-------LVNE 85
TYN+V+ L + ++ S ++ MKD PN T+ + Y L E
Sbjct: 497 TYNAVLATLARGGLWEQSEKVLAEMKDGGCK-PNEVTYSSLLHAYANGREVERMNALAEE 555
Query: 86 AMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
K LK V + VD L E E F E + G S V +
Sbjct: 556 IYSGTIKTHAVLLKTLVLVNSKVDLLVE-------TERAFLEFRKRGISPDVTTS----- 603
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N +L + + K E M + G+ L SY+ M + ++ K+ ++++E+
Sbjct: 604 NAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILD 663
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
KGI+ DV++YN VI A ++ +D A R+ EM+ P VVT NT I + E
Sbjct: 664 KGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFVE 723
Query: 266 AYAVLAEMPKKGCVPDVITYHCF 288
A V+ M K+GC P+ TY+
Sbjct: 724 AIDVIRYMIKQGCKPNHNTYNSI 746
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 164/350 (46%), Gaps = 10/350 (2%)
Query: 15 LEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
++FF W +F H + ++ ++I L + + W I M + + + + +
Sbjct: 111 IQFFKWAGKRRNFEHDSSSFMALIHSLDEAGFYGEMWKTIQDMVRSSTCVISSVYLSEIV 170
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGF 133
K A +VN+A+ F ++ K +Y +++ L + H+ + E+ + E N G
Sbjct: 171 KLLGKAKMVNKALSVFYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEI-YNEMCNDGN 229
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
T Y+ ++ + K+ + ++EM + G+ Y+ + I K K
Sbjct: 230 C----FPDTVTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKV 285
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
KA+ + KEMK KG + V Y I+ +G + VD A RV+ +M + GC+P VV N++
Sbjct: 286 EKALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSL 345
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYH----CFFRCLEKPREILGLFDRMIESG 309
I +L + GR+ + +M C P+V+TY+ F C E F++M G
Sbjct: 346 INILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCG 405
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
I P TY +L+ F + + ++ ++M+E G P AY +L+++L
Sbjct: 406 IAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSL 455
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 163/399 (40%), Gaps = 35/399 (8%)
Query: 16 EFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFK 75
E +N + D + T TY+++I GK +D + L MK+N P + +
Sbjct: 219 EIYNEMCNDGNCFPDTVTYSALISAFGKLGHYDSAIRLFDEMKEN-GLYPTAKIYTTLLG 277
Query: 76 RYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKN---- 130
Y V +A+ ++ + G V +Y + L + V +A + K+
Sbjct: 278 IYFKLDKVEKALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKP 337
Query: 131 -----------VGFSGLVEMN--------------KTKIYNMILRGWFKMSWWGKCREFW 165
+G G +E+ YN +++ F+ W
Sbjct: 338 DVVLINSLINILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASW 397
Query: 166 -EEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGV 224
E+M G+ +YSI +D CK+ + KA+ L +EM +KG AY ++I ++G
Sbjct: 398 FEKMKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGK 457
Query: 225 SEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
+ + A ++ E++E S +IK + GR+ EA + EM K G PDV
Sbjct: 458 VKRYEAANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYA 517
Query: 285 YHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKME 341
Y+ + + E L M E+G P ++++ ++L R G ++ KM+
Sbjct: 518 YNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMK 577
Query: 342 ELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
PD +YN ++ L G+ + A K EM KG
Sbjct: 578 SSIIKPDAVSYNTVLGCLSHAGLFEEAAKLMREMNLKGF 616
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 124/299 (41%), Gaps = 16/299 (5%)
Query: 35 NSVIDILGKFFEFDLSWNLIHRMKD---NPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
NS+I+ILGK +++ L +M+ P+ + + + +F+ A +EA F
Sbjct: 343 NSLINILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPA---SEAASWFE 399
Query: 92 KLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
K+ G+ +Y L+D C+ IE L E GF Y ++
Sbjct: 400 KMKGCGIAPSSFTYSILIDGFCKTNR-IEKALLLLEEMDEKGFPPC-----PAAYCSLIN 453
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
K+ + E + E+ + Y++ + K G+ +AV L+ EM+K G K
Sbjct: 454 SLGKVKRYEAANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKP 513
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
DV AYN ++ + + +D A + R M E GC P + + N ++ L G A +
Sbjct: 514 DVYAYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMF 573
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
A+M PD ++Y+ CL E L M G TY +L G+
Sbjct: 574 AKMKSSIIKPDAVSYNTVLGCLSHAGLFEEAAKLMREMNLKGFEYNNITYTSILEAVGK 632
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 173/376 (46%), Gaps = 11/376 (2%)
Query: 10 DWKRALEFFNW-VETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
+W +A+ F + V + +++I ILG+ + +L+ N+ + +A
Sbjct: 163 EWAKAIRCFEFAVRREQRRNEQGKLASAMISILGRLGQVELAKNVFETALNEGYGNTVYA 222
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGE 127
F + Y + +EA+ F + GLK V+Y ++DA + F E
Sbjct: 223 -FSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDE 281
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
G V+ ++ +N +L + W R + EM RG+ +D+ +Y+ +D +
Sbjct: 282 MLRNG----VQPDRI-TFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAV 336
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
CK G+ A ++ EM +K I +VV Y+TVI + +D A+ ++ EM+
Sbjct: 337 CKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDR 396
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDR 304
V+ NT++ + + GR EA V EM G D +TY+ K E+ +F+
Sbjct: 397 VSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEE 456
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
M I P + TY L+ + + G + V+++ ++ G D Y+AL+DAL G+
Sbjct: 457 MKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGL 516
Query: 365 LDMARKYDEEMFAKGL 380
++ A + +EM +G+
Sbjct: 517 VESAVSFLDEMTKEGI 532
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 138/307 (44%), Gaps = 24/307 (7%)
Query: 33 TYNSVIDILGKF-FEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
TYN+VID GK +F+ + + M N P+ TF + L A F+
Sbjct: 257 TYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQ-PDRITFNSLLAVCGRGGLWEAARNLFS 315
Query: 92 KLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI------ 144
++ G++ ++ +Y L+DA+C+ G ++ F + EM + I
Sbjct: 316 EMLYRGIEQDIFTYNTLLDAVCK------------GGQMDLAFQIMSEMPRKHIMPNVVT 363
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y+ ++ G+ K + + EM + D SY+ + I K G+ +A+ + KEM+
Sbjct: 364 YSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEME 423
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
GIK D V YN ++ G + RV+ EM+ P+++T +T+I + + G +
Sbjct: 424 SSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQ 483
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLL 321
EA V E K G DV+ Y L K + D M + GIRP + TY ++
Sbjct: 484 EAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSII 543
Query: 322 RKFGRWG 328
FGR G
Sbjct: 544 DAFGRSG 550
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 169/419 (40%), Gaps = 60/419 (14%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
W++ALE + + YNS I+ G +++++ +L+ M D +P+
Sbjct: 158 GQWEKALELLREIPEQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLREMADR-EVVPDEI 216
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGE 127
++ K +G ++ GL D ++Y +++ + EA
Sbjct: 217 SYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEA------- 269
Query: 128 NKNVGFSGLVEMN------KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
S L EM+ +T YNM +R + W + E +M+ +GV D+ SY
Sbjct: 270 -----LSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYD 324
Query: 182 IYMDIMCKSGKPWK-AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ C G W+ +V L EM +G+ + + +N+ I A G + A+ + RE+
Sbjct: 325 AAIK-ACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTA 383
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR---------- 290
+G P + N+ I ++GR +EA +L EMP K PD I+Y+
Sbjct: 384 LGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEM 443
Query: 291 --------------------------CLEKPR--EILGLFDRMIESGIRPKMDTYVMLLR 322
C E+ R E L L +M G+ P + TY ++
Sbjct: 444 ALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIK 503
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G+ G + KM+EL +PD YN+ + A +G A EM +GL+
Sbjct: 504 TCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLT 562
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 165/381 (43%), Gaps = 18/381 (4%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
W+R + + + T TYNSVI GK ++ + +++ M P
Sbjct: 228 GGQWERVIGLLREMPS-VGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAK-GLTPET 285
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFG 126
++ + + + EA+ +++ G+ D +SY + A C E
Sbjct: 286 ISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKA-CGGGGQWETSVDLLD 344
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
E G + T +N + K W K E E+ G+ D S++ +
Sbjct: 345 EMAGRGVA-----PNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAA 399
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
KSG+ +A++L KEM K +K D ++YN+ I A G + A+ + R+M G P+
Sbjct: 400 CTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPN 459
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE---ILGLFD 303
V++ N I+ E GR +E +L +MP +G P+VITY+ + K + L L
Sbjct: 460 VISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLA 519
Query: 304 RMIESGIRPKMDTY---VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+M E + P TY + K GRW + + ++M G +PD +Y A +DA
Sbjct: 520 KMKELAMTPDSITYNSAIAACSKRGRW---KEAVALLREMPGQGLTPDVISYTAAIDAYG 576
Query: 361 DKGMLDMARKYDEEMFAKGLS 381
G + A + +M KGL+
Sbjct: 577 KNGQWERAVELLRQMPTKGLT 597
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 151/354 (42%), Gaps = 10/354 (2%)
Query: 11 WKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
WK ALE + +YNS I+ GK +++++ L +M PN +
Sbjct: 406 WKEALELLKEMPAK-RLKPDAISYNSAIEACGKGGQWEMALELRRQMPTK-GLTPNVISS 463
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKN 130
I + E + ++ GL V N C E + K
Sbjct: 464 NIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKE 523
Query: 131 VGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS 190
+ + + YN + K W + EM +G+ D+ SY+ +D K+
Sbjct: 524 LAMT-----PDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKN 578
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTC 250
G+ +AV+L ++M KG+ +V+ YN+VI+A G + A+ + +E++E P +++
Sbjct: 579 GQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSY 638
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE---ILGLFDRMIE 307
N I + GR EA +L EMP +G PDVI+Y R E LGL + M
Sbjct: 639 NLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGA 698
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
G+ P +Y + + G+ G + ++M + G S + + +V+AL D
Sbjct: 699 HGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGLSHRNISNSLIVEALGD 752
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 166/381 (43%), Gaps = 24/381 (6%)
Query: 11 WKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
WK A+E +E+ T +Y++ I G +++ S +L+ M PN F
Sbjct: 301 WKEAVEVLRQMESQ-GVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGR-GVAPNTIHF 358
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENK 129
+A+ ++ GL D S+ + + A + EA EL
Sbjct: 359 NSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALEL------ 412
Query: 130 NVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
L EM ++ YN + K W E +M +G+ ++ S +I
Sbjct: 413 ------LKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIA 466
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ + G+ + ++L ++M +G+ +V+ YN+ I+ G + A+ + +M+E+
Sbjct: 467 IRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAM 526
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE---ILG 300
P +T N+ I + GR +EA A+L EMP +G PDVI+Y K + +
Sbjct: 527 TPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVE 586
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L +M G+ P + TY +++ GR G + K+++E +PD +YN + A
Sbjct: 587 LLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACG 646
Query: 361 DKGMLDMARKYDEEMFAKGLS 381
+G + A EM A+GL+
Sbjct: 647 KRGRWEEALDLLREMPAEGLT 667
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 125/314 (39%), Gaps = 8/314 (2%)
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENK 129
+ + T EA+G +++ E G+ SY + +A EL +
Sbjct: 113 LQAALREAATTGKWREALGILDEMKEGGVVCAHSYTTAITTCGRQGQWEKALELLREIPE 172
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
G S V YN + W EM R VV D SY+ + +
Sbjct: 173 QEGVSPNV-----FCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGR 227
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
G+ + + L +EM G+ D + YN+VI G A+ V EM G P ++
Sbjct: 228 GGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETIS 287
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE---ILGLFDRMI 306
N I+ +GR +EA VL +M +G PDVI+Y + + + L D M
Sbjct: 288 YNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMA 347
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
G+ P + + G+ G + +++ LG +PD ++N+ + A G
Sbjct: 348 GRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWK 407
Query: 367 MARKYDEEMFAKGL 380
A + +EM AK L
Sbjct: 408 EALELLKEMPAKRL 421
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 112/285 (39%), Gaps = 38/285 (13%)
Query: 11 WKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKD---NPSSIPNH 67
W+ LE + T TYNS I GK +++ + +L+ +MK+ P SI +
Sbjct: 476 WQEGLELLRQMPAQ-GLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYN 534
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL--- 123
+ KR EA+ ++ GL D +SY +DA + A EL
Sbjct: 535 SAIAACSKR----GRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQ 590
Query: 124 --CFGENKNV----------GFSG--------LVEMNKTKI------YNMILRGWFKMSW 157
G NV G G L E+ +T + YN+ + K
Sbjct: 591 MPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGR 650
Query: 158 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
W + + EM G+ D+ SY+ + G+ KA+ L M G+ +Y+
Sbjct: 651 WEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSL 710
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
I A G + A+ + REM + G ++ + +++ L ++ +
Sbjct: 711 AIEACGKGGRREEAVCLVREMAQRGLSHRNISNSLIVEALGDDAK 755
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 83/193 (43%), Gaps = 34/193 (17%)
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM-GCQPSVV 248
+GK +A+ + EMK+ G+ + +Y T I G + A+ + RE+ E G P+V
Sbjct: 123 TGKWREALGILDEMKEGGV-VCAHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVF 181
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIES 308
N+ I+ + A ++L EM + VPD I+Y+ + + G ++R+I
Sbjct: 182 CYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRG----GQWERVI-- 235
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G LR +M +G +PD YN+++ +G A
Sbjct: 236 -------------------GLLR-------EMPSVGLTPDAITYNSVITGCGKEGQWKEA 269
Query: 369 RKYDEEMFAKGLS 381
EM AKGL+
Sbjct: 270 LSVLTEMSAKGLT 282
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 122/239 (51%), Gaps = 3/239 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y ++L K S + + + +EM +G D+ +Y++ ++ +C+ G+ A++ K +
Sbjct: 194 YTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLP 253
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
G + + V+YN V++ + +E + A ++ EM + G P+VVT N +I LC G V
Sbjct: 254 SHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVE 313
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
A VL ++PK GC P+ ++Y+ K +++ + + M+ G P + +Y LL
Sbjct: 314 PAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLL 373
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
R G + + ++++ GC+P +YN ++D L G A + EM KGL
Sbjct: 374 TALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGL 432
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 141/324 (43%), Gaps = 18/324 (5%)
Query: 60 NPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVI 118
+P+++P+ A + V + EA+ + C L+ LC
Sbjct: 52 SPNAVPHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTA 111
Query: 119 EAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
EA+ + +V YN ++ G+ R +M D +
Sbjct: 112 EARRVLAACEPDV-----------MAYNAMVAGYCVTGQLDAARRLVADMPME---PDSY 157
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+Y+ + +C G+ A+ + +M ++G DVV Y ++ A G AM++ EM
Sbjct: 158 TYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 217
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKP 295
R GC P ++T N V+ +C+ GRV +A L +P GC P+ ++Y+ + L E+
Sbjct: 218 RAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERW 277
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
+ L M + G P + T+ ML+ R G + P V ++ + GC+P+ +YN +
Sbjct: 278 EDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPI 337
Query: 356 VDALIDKGMLDMARKYDEEMFAKG 379
+ A + +D A + E M ++G
Sbjct: 338 LHAFCKQKKMDRAMAFVELMVSRG 361
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 122/243 (50%), Gaps = 9/243 (3%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++RG G ++M +RG V D+ +Y+I ++ CK +A+KL EM+
Sbjct: 159 YNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 218
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
KG D++ YN V+ + VD A+ + + GC+P+ V+ N V+K LC R
Sbjct: 219 AKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWE 278
Query: 265 EAYAVLAEMPKKGCVPDVITYHCF--FRC----LEKPREILGLFDRMIESGIRPKMDTYV 318
+A ++AEM +KG P+V+T++ F C +E E+L D++ + G P +Y
Sbjct: 279 DAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVL---DQIPKYGCTPNSLSYN 335
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+L F + + + M GC PD +YN L+ AL G +D A + ++ K
Sbjct: 336 PILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDK 395
Query: 379 GLS 381
G +
Sbjct: 396 GCT 398
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 164/359 (45%), Gaps = 45/359 (12%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQE 122
+P+ T+ I+ + +AM +++ G D ++Y +V+ +C+ V +A E
Sbjct: 188 VPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIE 247
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
K++ G E N T YN++L+G W + EM ++G ++ ++++
Sbjct: 248 FL----KSLPSHG-CEPN-TVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNM 301
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ +C+ G A+++ ++ K G + ++YN ++ A + +D AM M G
Sbjct: 302 LISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRG 361
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REIL 299
C P +V+ NT++ LC G V A +L ++ KGC P +I+Y+ L K +E L
Sbjct: 362 CYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEAL 421
Query: 300 GLFDRMIESGIRPKMDTYVML-------------LRKFGRWG--FLRPVFVVWKK----- 339
L + M+ G++P + TY + +R F + +RP V++
Sbjct: 422 ELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGL 481
Query: 340 ---------------MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAK 383
M GC P+E Y L++ L +G++ AR+ E+ ++G+ +K
Sbjct: 482 CKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVVSK 540
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 145/333 (43%), Gaps = 16/333 (4%)
Query: 5 SCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPS-- 62
+C + +K+A++ + + TYN V++ + + D + I +K PS
Sbjct: 201 TCKRSGYKQAMKLLDEMRAK-GCAPDIITYNVVVNGICQEGRVD---DAIEFLKSLPSHG 256
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQ 121
PN ++ I+ K TA +A ++ + G V N L+ LC V A
Sbjct: 257 CEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAM 316
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
E+ + G + + YN IL + K + F E M RG D+ SY+
Sbjct: 317 EV-LDQIPKYGCT-----PNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYN 370
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+ +C+ G+ AV+L ++K KG +++YNTVI + + A+ + EM
Sbjct: 371 TLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTK 430
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI--- 298
G QP ++T +T+ LC R+ EA ++ G P+ + Y+ L K RE
Sbjct: 431 GLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNA 490
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
+ LF MI +G P TY +L+ G ++
Sbjct: 491 IDLFIYMISNGCMPNESTYTILIEGLTYEGLVK 523
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 123/289 (42%), Gaps = 9/289 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A W+ A + + + T+N +I L + + + ++ ++ P
Sbjct: 272 CTAERWEDAEKLMAEMSQK-GYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKY-GCTP 329
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELC 124
N ++ + + ++ AM + G D VSY L+ ALC V A EL
Sbjct: 330 NSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVEL- 388
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+ K+ G + ++ YN ++ G K + E EM +G+ D+ +YS
Sbjct: 389 LHQLKDKGCTPVLIS-----YNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTIS 443
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+C+ + +A++ + +++ GI+ + V YN ++ + A+ ++ M GC
Sbjct: 444 SGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCM 503
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE 293
P+ T +I+ L G V+EA +L E+ +G V + R L+
Sbjct: 504 PNESTYTILIEGLTYEGLVKEARELLGELCSRGVVSKGLINKAAIRLLD 552
>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
Length = 628
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 159/332 (47%), Gaps = 20/332 (6%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
IP+ T+ A +++ + ++D G+ D V++C+++ LC+ + +A +
Sbjct: 184 IPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQ 243
Query: 123 LCFGENKNVGFSGLVE---MNKTKIYNMILRGWFKMSWWGKCREFWEEMD--KRGVVKDL 177
+ F G++E + + Y+++L + + E E M K G V ++
Sbjct: 244 V---------FKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEV 294
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
++++ ++ +C+SGK A + M + G ++++YN VI + S VD A ++ R+
Sbjct: 295 YTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRK 354
Query: 238 MREMGC-QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG-CVPDVITYHCFFRCLEK- 294
M + GC +P V+ NT+I C+ GR+ +A+ +L EM K CVPDV+TY+ K
Sbjct: 355 MLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKF 414
Query: 295 --PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
++ L M G +P + TY L+ + + G ++ +M GC PD Y
Sbjct: 415 GSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITY 474
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
N ++ A GM+ A +++ K P
Sbjct: 475 NTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSP 506
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 179/388 (46%), Gaps = 43/388 (11%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY ++ID L K + D + L+ +M D PN T+ + A ++A+ T +
Sbjct: 12 TYTTLIDGLCKSGDLDAAQALLQKMAD-AGCAPNVVTYTALIDGLCKARRPHDAIQTVKR 70
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEA----QELC---FGENKNVGFSGLV------- 137
+ G + D V+Y +L+ LC + +A QEL F N ++ +S LV
Sbjct: 71 MLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPN-HITYSTLVIWNCRRR 129
Query: 138 --EMNKTKIYNMILRGWFK-----------------MSWWGKCREFWEEMDKRGVVKDLH 178
+ + I MILRG S +CR+ +EM + G + D+
Sbjct: 130 RLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRD-GDEMIESGRIPDVV 188
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+Y+ ++ +CK+GK K +++ +EM + GI DVV + ++I + + +D A +V++ M
Sbjct: 189 TYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGM 248
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP--KKGCVPDVITYHCFFRCLEKPR 296
E GC P +T + ++ L R+ VL M K GCV +V T++ F L +
Sbjct: 249 LERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSG 308
Query: 297 EIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG-CSPDEFAY 352
+ + MIESG P + +Y ++ + G + + + +KM + G C PD +
Sbjct: 309 KFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFF 368
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKGL 380
N L+ G L A + EM AK +
Sbjct: 369 NTLISGFCKAGRLSQAHQLLIEMKAKNI 396
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 149/339 (43%), Gaps = 17/339 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAH---LVNEAMGT 89
T+ S+I L K D ++ + M + +P+ T+ IM A+ V+E +
Sbjct: 224 TFCSIISGLCKANRIDDAFQVFKGMLER-GCVPDSLTYSIMLDNLSRANRLDTVDEVLEH 282
Query: 90 FNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+ + + ++ + ALC A+ + G ++ L+ YN ++
Sbjct: 283 MQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLS------YNFVI 336
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVK-DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
G K + +M G K D+ ++ + CK+G+ +A +L EMK K I
Sbjct: 337 DGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNI 396
Query: 209 KM-DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ DVV YNT+I + A + +EM+ +GC+P+VVT +I ++G EA
Sbjct: 397 CVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAE 456
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIE--SGIRPKMDTYVMLLR 322
++ EM KGC PD+ITY+ K + G++ ++ S P TY +L+
Sbjct: 457 SLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILID 516
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
+ R + ++M G S D + YN L+ L +
Sbjct: 517 GYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAE 555
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 125/316 (39%), Gaps = 81/316 (25%)
Query: 102 VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKC 161
V+Y L+D LC+ + AQ L
Sbjct: 11 VTYTTLIDGLCKSGDLDAAQAL-------------------------------------- 32
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
++M G ++ +Y+ +D +CK+ +P A++ K M + G + D+V YN++I
Sbjct: 33 ---LQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHG 89
Query: 222 VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV-- 279
+ ++ +D A V +E+ G P+ +T +T++ C R+ +A ++ EM +G V
Sbjct: 90 LCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRLDQARGLIREMILRGSVCN 149
Query: 280 -----------------------------------PDVITYHCFFRCLEKPREI---LGL 301
PDV+TY+ F L K ++ L +
Sbjct: 150 LVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEM 209
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
+ M GI P + T+ ++ + + F V+K M E GC PD Y+ ++D L
Sbjct: 210 LEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSR 269
Query: 362 KGMLDMARKYDEEMFA 377
LD + E M A
Sbjct: 270 ANRLDTVDEVLEHMQA 285
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 98/221 (44%), Gaps = 11/221 (4%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M G + +Y+ +D +CKSG A L ++M G +VV Y +I + +
Sbjct: 1 MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY-- 285
A++ + M GC+P +VT N++I LC R+ +A VL E+ + G P+ ITY
Sbjct: 61 PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120
Query: 286 ----HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKF--GRWGFLRPVFVVWKK 339
+C R L++ R GL MI G + Y+ + F R R +
Sbjct: 121 LVIWNCRRRRLDQAR---GLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDE 177
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
M E G PD YN + L G LD + EEM G+
Sbjct: 178 MIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGI 218
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 121/285 (42%), Gaps = 36/285 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF-- 90
+YN VID L K D +W L +M D+ P+ F + + A +++A
Sbjct: 331 SYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIE 390
Query: 91 NKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG-------FSGLV------ 137
K + D V+Y L+D ++ + +A+ L E + VG ++ L+
Sbjct: 391 MKAKNICVPDVVTYNTLIDGQSKFGSLKQAK-LLLQEMQAVGCKPNVVTYAALINGYAKH 449
Query: 138 -----------EMNKTK------IYNMILRGWFKMSWWGKCREFWEEMDKRG--VVKDLH 178
EM+ YN +L + K K ++++ + D
Sbjct: 450 GMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAI 509
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF-AMRVYRE 237
+Y I +D C++ + + L +EM +G D YN +I + +E V A+ VY++
Sbjct: 510 TYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQ 569
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
M + C PS N++++L G V A +++ EM +KG + D
Sbjct: 570 MLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKGHLVDA 614
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 179/398 (44%), Gaps = 36/398 (9%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + AL F + T F T T+N+++ L + +L H+M P
Sbjct: 26 CSCSKLPFALSTFGKL-TKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK-----P 79
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N TF + V EA+ +++ E GL+ ++++Y +VD +C+ + A L
Sbjct: 80 NVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNL- 138
Query: 125 FGENKNVGFSGLVEMNKTK----IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+ E++ K IY+ I+ G +K + + EM +G+ D+ +Y
Sbjct: 139 --------LRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTY 190
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG-VDFAMRVYREMR 239
S ++ C SGK +A +L +EM + I DVV ++ +I A+ V EG ++ A + +EM
Sbjct: 191 SCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINAL-VKEGDLNSAQDLLQEMI 249
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK-----------GCVPDVITYHCF 288
G P+VVTCNT++ LC++G++++A + M K G PDV TY+
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309
Query: 289 FRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
L + L L++ M GI P TY ++ + L ++ M
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAK 383
SP+ +N L+ GM+D + EM +G+ A
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVAN 407
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 144/337 (42%), Gaps = 24/337 (7%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C D AL +E H Y+++ID L K + NL M+D P
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDK-GIFP 185
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ M + ++ +EA ++ + D V++ L++AL + + AQ+L
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLL 245
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDK-----------RGV 173
+ + SG+ N +L G E ++ M K GV
Sbjct: 246 ----QEMISSGVCP--NVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGV 299
Query: 174 VKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMR 233
D+ +Y+I + + GK +A +LY+EM +GI D V Y+++I + +D A +
Sbjct: 300 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQ 359
Query: 234 VYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE 293
++ M P++VT NT+I C+ G V + + EM ++G V + ITY R
Sbjct: 360 MFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFR 419
Query: 294 KPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
K I L +F MI SG+ P DT + G W
Sbjct: 420 KVGNINGSLDIFQEMISSGVYP--DTITIRNMLTGLW 454
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 89/177 (50%), Gaps = 8/177 (4%)
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
I D+ ++N +I+ + FA+ + ++ ++G P++VT NT++ LC RV EA
Sbjct: 11 IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL 70
Query: 268 AVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
+ +M C P+V+T+ C E + E + L DRM+E G++P TY ++
Sbjct: 71 DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126
Query: 325 GRWGFLRPVFVVWKKMEELG-CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ G + +KMEEL PD Y+A++D L G A+ EM KG+
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGI 183
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 107/252 (42%), Gaps = 45/252 (17%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQEL 123
P+ TF + V +N A ++ G+ V CN L+D LC+ + +A E+
Sbjct: 220 PDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEM 279
Query: 124 CFGENKNV-------GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
K++ F+G VE + + YN+++ G + + E +EEM RG+V D
Sbjct: 280 FKAMQKSMMDIDATHAFNG-VEPD-VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 337
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYK----------------------------------- 201
+YS ++ +CK + +A +++
Sbjct: 338 TVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFC 397
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
EM ++GI + + Y T+IR ++ ++ +++EM G P +T ++ L
Sbjct: 398 EMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKE 457
Query: 262 RVREAYAVLAEM 273
+++A A+L E+
Sbjct: 458 ELKKALAMLEEL 469
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 78/176 (44%), Gaps = 7/176 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ I+ + EA + ++ G+ D V+Y ++++ LC+ + EA ++
Sbjct: 301 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQM 360
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + FS +N ++ G+ K E + EM +RG+V + +Y
Sbjct: 361 -FDSMGSKSFS-----PNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITL 414
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
+ K G ++ +++EM G+ D + ++ + E + A+ + E++
Sbjct: 415 IRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQ 470
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 179/398 (44%), Gaps = 36/398 (9%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + AL F + T F T T+N+++ L + +L H+M P
Sbjct: 26 CSCSKLPFALSTFGKL-TKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK-----P 79
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N TF + V EA+ +++ E GL+ ++++Y +VD +C+ + A L
Sbjct: 80 NVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNL- 138
Query: 125 FGENKNVGFSGLVEMNKTK----IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+ E++ K IY+ I+ G +K + + EM +G+ D+ +Y
Sbjct: 139 --------LRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTY 190
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG-VDFAMRVYREMR 239
S ++ C SGK +A +L +EM + I DVV ++ +I A+ V EG ++ A + +EM
Sbjct: 191 SCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINAL-VKEGDLNSAQDLLQEMI 249
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK-----------GCVPDVITYHCF 288
G P+VVTCNT++ LC++G++++A + M K G PDV TY+
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309
Query: 289 FRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
L + L L++ M GI P TY ++ + L ++ M
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAK 383
SP+ +N L+ GM+D + EM +G+ A
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVAN 407
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 144/337 (42%), Gaps = 24/337 (7%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C D AL +E H Y+++ID L K + NL M+D P
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDK-GIFP 185
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ M + ++ +EA ++ + D V++ L++AL + + AQ+L
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLL 245
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDK-----------RGV 173
+ + SG+ N +L G E ++ M K GV
Sbjct: 246 ----QEMISSGVCP--NVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGV 299
Query: 174 VKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMR 233
D+ +Y+I + + GK +A +LY+EM +GI D V Y+++I + +D A +
Sbjct: 300 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQ 359
Query: 234 VYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE 293
++ M P++VT NT+I C+ G V + + EM ++G V + ITY R
Sbjct: 360 MFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFR 419
Query: 294 KPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
K I L +F MI SG+ P DT + G W
Sbjct: 420 KVGNINGSLDIFQEMISSGVYP--DTITIRNMLTGLW 454
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 89/177 (50%), Gaps = 8/177 (4%)
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
I D+ ++N +I+ + FA+ + ++ ++G P++VT NT++ LC RV EA
Sbjct: 11 IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL 70
Query: 268 AVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
+ +M C P+V+T+ C E + E + L DRM+E G++P TY ++
Sbjct: 71 DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126
Query: 325 GRWGFLRPVFVVWKKMEELG-CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ G + +KMEEL PD Y+A++D L G A+ EM KG+
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGI 183
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 106/252 (42%), Gaps = 45/252 (17%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQEL 123
P+ TF + V +N A ++ G+ V CN L+D LC+ + +A E+
Sbjct: 220 PDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEM 279
Query: 124 CFGENKNV-------GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
K++ F+G VE + + YN+++ G + + E +EEM RG+V D
Sbjct: 280 FKAMQKSMMDIDATHAFNG-VEPD-VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 337
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYK----------------------------------- 201
+YS ++ +CK + +A +++
Sbjct: 338 TVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFC 397
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
EM ++GI + + Y T+IR ++ ++ +++EM G P +T ++ L
Sbjct: 398 EMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKE 457
Query: 262 RVREAYAVLAEM 273
++ A A+L E+
Sbjct: 458 ELKRALAMLEEL 469
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 78/176 (44%), Gaps = 7/176 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ I+ + EA + ++ G+ D V+Y ++++ LC+ + EA ++
Sbjct: 301 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQM 360
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + FS +N ++ G+ K E + EM +RG+V + +Y
Sbjct: 361 -FDSMGSKSFS-----PNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITL 414
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
+ K G ++ +++EM G+ D + ++ + E + A+ + E++
Sbjct: 415 IRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 195/402 (48%), Gaps = 19/402 (4%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D +F++ +E D H T+ ++D L K F ++ + M+D +PN T
Sbjct: 345 DLDSVNQFWSEMEKDGHVPDVV-TFTILVDALCKAGNFGEAFAKLDVMRDQ-GILPNLHT 402
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGEN 128
+ + + H +++A+ F+ ++ G+K +Y +D + + A E F +
Sbjct: 403 YNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE-TFEKM 461
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
K G + + +Y++ G + + ++ + + G+V D +Y++ M
Sbjct: 462 KTKGIAPNIVACNASLYSLAKAGRDR-----EAKQIFYGLKDIGLVPDSVTYNMMMKCYS 516
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
K G+ +A+KL EM + + DV+ N++I + ++ VD A +++ M+EM +P+VV
Sbjct: 517 KVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 576
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRM 305
T NT++ L +NG+++EA + M +KGC P+ IT++ F CL K E+ L + +M
Sbjct: 577 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 636
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
++ G P + TY ++ + G ++ + +M++L PD L+ ++ G++
Sbjct: 637 MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKAGLI 695
Query: 366 DMARKYDEEMFAKGLSAKP-----REELGTKLVQGGLDGEQS 402
+ A K F + +P + +G+ L + G+D S
Sbjct: 696 EDAYKIIAN-FLYSCADQPANLFWEDLMGSILAEAGIDNAVS 736
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 172/407 (42%), Gaps = 40/407 (9%)
Query: 12 KRALEFF-NWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
+ A+E F V+ C T T+N++ D L K E L+ ++ +M D +P+ T+
Sbjct: 592 QEAIELFEGMVQKGC--PPNTITFNTLFDCLCKNDEVTLALKMLFKMMDM-GCVPDVFTY 648
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCE-------YKHVIEAQEL 123
+ V V EAM F+++ + D V+ C L+ + + YK +
Sbjct: 649 NTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYS 708
Query: 124 CFGENKNV-------------GFSGLVEMNKTKIYN-----------MILRGWFKMSWWG 159
C + N+ G V ++ + N I+R FK +
Sbjct: 709 CADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNAS 768
Query: 160 KCREFWEEMDKR-GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTV 218
R +E+ K GV L +Y++ + + ++ A ++ ++K G DV YN +
Sbjct: 769 GARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFL 828
Query: 219 IRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE-MPKKG 277
+ A G S +D +Y+EM C+P+ +T N VI L + G V +A + + M +
Sbjct: 829 LDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRD 888
Query: 278 CVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
P TY L K E LF+ M + G RP Y +L+ FG+ G
Sbjct: 889 FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAAC 948
Query: 335 VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
++K+M + G PD Y+ LVD L G +D Y E+ GL+
Sbjct: 949 ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLN 995
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 167/383 (43%), Gaps = 25/383 (6%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDIL---GKFFE----FDLSWNLIHRMKDNPS 62
D + +F V + + HTT+T N +++ L GK E FDL I + N
Sbjct: 99 DTDSSFSYFKSVAGNSNLVHTTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTN-- 156
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQ 121
T+ +FK + +A K+ EFG + + SY L+ L + + EA
Sbjct: 157 ------TYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAM 210
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
E+ + + G +T Y+ ++ G K +EM+ G+ ++++++
Sbjct: 211 EV----YRRMILDGFRPSLQT--YSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFT 264
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
I + ++ ++GK +A ++ K M +G DVV Y +I A+ + +D A V+ +M+
Sbjct: 265 ICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTG 324
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REI 298
+P VT T++ +N + +EM K G VPDV+T+ L K E
Sbjct: 325 RHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEA 384
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
D M + GI P + TY L+ R L ++ ME LG P + Y +D
Sbjct: 385 FAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDY 444
Query: 359 LIDKGMLDMARKYDEEMFAKGLS 381
G A + E+M KG++
Sbjct: 445 YGKSGDSVSALETFEKMKTKGIA 467
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 143/323 (44%), Gaps = 12/323 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL 123
P T+ ++ + A ++ A F ++ G + D +Y L+DA + + E E+
Sbjct: 785 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEI 844
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCRE-FWEEMDKRGVVKDLHSYSI 182
+ E S T +N+++ G K + +++ M R +Y
Sbjct: 845 -YKE-----MSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGP 898
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D + KSG+ ++A +L++ M G + + YN +I G + D A +++ M + G
Sbjct: 899 LIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 958
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREIL 299
+P + T + ++ LC GRV E E+ + G PDV+ Y+ L K E L
Sbjct: 959 VRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEAL 1018
Query: 300 GLFDRMIES-GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
LF+ M +S GI P + TY L+ G G + ++ +++ G P+ F +NAL+
Sbjct: 1019 VLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1078
Query: 359 LIDKGMLDMARKYDEEMFAKGLS 381
G + A + M G S
Sbjct: 1079 YSLSGKPEHAYAVYQTMVTGGFS 1101
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 158/352 (44%), Gaps = 11/352 (3%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
N+ A F D TYN +I L + +++ ++ ++K N IP+ A
Sbjct: 765 NNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVK-NTGCIPDVA 823
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE 127
T+ + Y + ++E + ++ + + +++ ++ L + +V +A +L +
Sbjct: 824 TYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDL 883
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
+ FS Y ++ G K + ++ +E M G + Y+I ++
Sbjct: 884 MSDRDFS-----PTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGF 938
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
K+G+ A L+K M K+G++ D+ Y+ ++ + + VD + +RE++E G P V
Sbjct: 939 GKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDV 998
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPK-KGCVPDVITYHCFFRCLEKP---REILGLFD 303
V N +I L + R+ EA + EM K +G PD+ TY+ L E +++
Sbjct: 999 VCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYN 1058
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
+ +G+ P + T+ L+R + G + V++ M G SP+ Y L
Sbjct: 1059 EIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110
>gi|359495626|ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic [Vitis vinifera]
Length = 701
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 155/328 (47%), Gaps = 26/328 (7%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN + + K D + L M + P++ TF + + L N+A+ F K+
Sbjct: 179 YNVTLKVFRKCRNLDRAEKLFDEMLER-GVKPDNITFSTIISCARVSSLPNKAVEWFEKM 237
Query: 94 DEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKN-------VGFSGLVEMNKTKIY 145
EFG D+V+Y ++DA +V A +L + + V FS L+ +IY
Sbjct: 238 PEFGCHPDDVTYSAMIDAYGRAGNVDMALKL-YDRARTEKWRIDPVTFSTLI-----RIY 291
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
M G F C +EEM GV +L Y+ +D M ++ +PW+A +YKEM
Sbjct: 292 GM--SGNFD-----GCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTN 344
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G++ Y ++RA G + + A+ VY+EM+E G + SVV NT++ + + G E
Sbjct: 345 NGLQPSWGTYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEE 404
Query: 266 AYAVLAEMPKKG-CVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLL 321
A A+ +M G C+PD T+ + C K E + + M+E+G P + L+
Sbjct: 405 AAAIFEDMKSSGNCMPDSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLI 464
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDE 349
+ +G+ V + ++ EL +PD+
Sbjct: 465 QCYGKANRTDEVVRTFDRLLELDITPDD 492
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 117/239 (48%), Gaps = 3/239 (1%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+YN+ L+ + K + + ++EM +RGV D ++S + S P KAV+ +++M
Sbjct: 178 LYNVTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEKM 237
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
+ G D V Y+ +I A G + VD A+++Y R + VT +T+I++ +G
Sbjct: 238 PEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNF 297
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVML 320
V EM G P+++ Y+ + ++P + ++ M +G++P TY L
Sbjct: 298 DGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAAL 357
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
LR +GR + +V+K+M+E G YN L+ D G + A E+M + G
Sbjct: 358 LRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSG 416
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 131/307 (42%), Gaps = 52/307 (16%)
Query: 13 RALEFFNWV-ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
+A+E+F + E CH T Y+++ID G+ D++ L R + I + TF
Sbjct: 229 KAVEWFEKMPEFGCHPDDVT--YSAMIDAYGRAGNVDMALKLYDRARTEKWRI-DPVTFS 285
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNV 131
+ + Y + + + + ++ G+K NLV
Sbjct: 286 TLIRIYGMSGNFDGCLNVYEEMKALGVKP-----NLV----------------------- 317
Query: 132 GFSGLVEMNKTKIYNMILR--GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
IYN +L G K W K ++EM G+ +Y+ + +
Sbjct: 318 ------------IYNTLLDAMGRAKRPWQAK--NIYKEMTNNGLQPSWGTYAALLRAYGR 363
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG-CQPSVV 248
+ A+ +YKEMK+KG+++ VV YNT++ + A ++ +M+ G C P
Sbjct: 364 ARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMPDSW 423
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRM 305
T +++I + +G+V EA A+L M + G P++ +C K E++ FDR+
Sbjct: 424 TFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTFDRL 483
Query: 306 IESGIRP 312
+E I P
Sbjct: 484 LELDITP 490
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 3/173 (1%)
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
+V+ YN ++ +D A +++ EM E G +P +T +T+I + +A
Sbjct: 175 EVILYNVTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWF 234
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
+MP+ GC PD +TY + + L L+DR R T+ L+R +G
Sbjct: 235 EKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMS 294
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G V+++M+ LG P+ YN L+DA+ A+ +EM GL
Sbjct: 295 GNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGL 347
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 141/326 (43%), Gaps = 50/326 (15%)
Query: 100 DEVSYCNLVDALCE---YKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMS 156
D+ ++ LV+ LC+ KH IE ++ E G+ V YN ++ G K+
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE----GYDPDV-----YTYNSVISGLCKLG 344
Query: 157 WWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
+ EF ++M R + +Y+ + +CK + +A +L + + KGI DV +N
Sbjct: 345 EVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 404
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
++I+ + ++ AM ++ EMR GC+P T N +I LC G++ EA +L +M
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 277 GCVPDVITYH------CFFRCLEKPREILG------------------------------ 300
GC VITY+ C + + EI
Sbjct: 465 GCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 301 --LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
L D+MI G +P TY LL F R G ++ + + M GC PD Y L+
Sbjct: 525 SQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAKP 384
L G +++A K + KG++ P
Sbjct: 585 LCKAGRVEVASKLLRSIQMKGIALTP 610
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 189/452 (41%), Gaps = 76/452 (16%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
++L A+D AL FN +F+ Y ++ LG+ FD ++ MK++
Sbjct: 55 DSLRSQADD-SAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSG 113
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFN-KLDEFGLKDEVSYCN-----LVDA----L 111
+ + F I+ + Y L +E +G + +D+FGLK + + N LVD L
Sbjct: 114 CEM-GTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKL 172
Query: 112 CEYKHV---------------IEAQELCFGEN--------KNVGFSGLVEMNKTKIYNMI 148
E H + + LC +++ GLV KT + I
Sbjct: 173 VEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKT--FTTI 230
Query: 149 LRGW------------------FKMSW---------WGKCRE--------FWEEM-DKRG 172
++G+ F SW G C+E F +EM ++ G
Sbjct: 231 MQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDG 290
Query: 173 VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM 232
D ++++ ++ +CK+G A+++ M ++G DV YN+VI + V A+
Sbjct: 291 FFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 350
Query: 233 RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR-- 290
+M C P+ VT NT+I LC+ +V EA + + KG +PDV T++ +
Sbjct: 351 EFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Query: 291 CLEKPREI-LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE 349
CL + + + LF+ M G P TY ML+ G L + K+ME GC+
Sbjct: 411 CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV 470
Query: 350 FAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
YN L+D + A + +EM G+S
Sbjct: 471 ITYNTLIDGFCKANKIREAEEIFDEMEVHGVS 502
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 177/396 (44%), Gaps = 37/396 (9%)
Query: 6 CYANDWKRALEFFNWVET-DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C + K A+EF + + T DC + T TYN++I L K + + + L R+ + +
Sbjct: 341 CKLGEVKEAVEFLDQMITRDC--SPNTVTYNTLISTLCKENQVEEATEL-ARVLTSKGIL 397
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ TF + + AM F ++ G + DE +Y L+D+LC + EA +
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
K + SG T YN ++ G+ K + + E ++EM+ GV ++ +Y+
Sbjct: 458 L----KQMELSGCARSVIT--YNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D +CKS + A +L +M +G K D YN+++ + A + + M GC
Sbjct: 512 IDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILG 300
+P +VT T+I LC+ GRV A +L + KG Y+ + L + R E +
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAIN 631
Query: 301 LFDRMIESG-IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
LF M+E P +Y ++ R G P A + LV+ L
Sbjct: 632 LFREMLEQNEAAPDAVSYRIVFRGLCNGG-----------------GPIREAVDFLVE-L 673
Query: 360 IDKGML-DMARKYDEEMFAKGLSAKPREELGTKLVQ 394
++KG + + + Y M A+GL EE KLV
Sbjct: 674 LEKGFVPEFSSLY---MLAEGLLTLSMEETLVKLVN 706
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 152/368 (41%), Gaps = 23/368 (6%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A K A+E + + + + TYNSVI L K E + + +M S P
Sbjct: 306 CKAGHVKHAIEIMDVMLQE-GYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCS-P 363
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCF 125
N T+ + + V EA L G+ +V C + +I Q LC
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDV---------CTFNSLI--QGLCL 412
Query: 126 GENKNVGFSGLVEMNKTK------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
N V EM YNM++ + ++M+ G + + +
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y+ +D CK+ K +A +++ EM+ G+ + V YNT+I + S V+ A ++ +M
Sbjct: 473 YNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMI 532
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR--E 297
G +P T N+++ C G +++A ++ M GC PD++TY L K E
Sbjct: 533 MEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592
Query: 298 ILGLFDRMIE-SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM-EELGCSPDEFAYNAL 355
+ R I+ GI Y +++ R ++++M E+ +PD +Y +
Sbjct: 593 VASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIV 652
Query: 356 VDALIDKG 363
L + G
Sbjct: 653 FRGLCNGG 660
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 181/382 (47%), Gaps = 16/382 (4%)
Query: 13 RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
+A FF+ + H ++N ++ L K + ++L + M+ S P+ T I
Sbjct: 74 QAFHFFDLMMRS-HPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLS-PDLFTLSI 131
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNV 131
+ + V+EA+ + G + + V+Y L+ LC + EA L F + +
Sbjct: 132 LANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRL-FLRMQKL 190
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGV--VKDLHSYSIYMDIMCK 189
G + T I + G ++ +E + + GV + +YSI +D +CK
Sbjct: 191 GCTPNAVTYGTLIKGLCQTGNVNIALKLH-KEMLNDASQYGVNCKPGVITYSIIIDGLCK 249
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
G+ +A +L++EMK +G+ DV++Y+T+I + D + ++ EM + G QP +VT
Sbjct: 250 VGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVT 309
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCLEKPREILGLFD 303
+ +I LC+ G+V EA +L M ++G VP++ITY+ C L RE LF
Sbjct: 310 FSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARE---LFL 366
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
M G+ P +Y L+ + + ++ ++ +M ++G SP+ Y L+ L KG
Sbjct: 367 SMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKG 426
Query: 364 MLDMARKYDEEMFAKGLSAKPR 385
+ A+K M G+SA +
Sbjct: 427 KVGDAKKLFGVMKTYGVSANSQ 448
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 162/343 (47%), Gaps = 18/343 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A W ++ F+ + D T++ +ID L K + + L+ M +P
Sbjct: 283 CCAGKWDQSKHLFDEM-VDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQR-GIVP 340
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N T+ + + +N A F + GL+ DE+SY L++ C+ V EA L
Sbjct: 341 NLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNL- 399
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+ E VG S V Y +L+G F+ G ++ + M GV + Y I++
Sbjct: 400 YNEMLQVGKSPNV-----TTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFL 454
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D +CK+ ++A++L+ E+K K+++ Y+ +I + + ++ A ++ ++ + G Q
Sbjct: 455 DGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQ 514
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH---CFFRCLEKPREILGL 301
P VVT N +I C+ G+V A + +M + GC PD+I Y+ C F K E++ L
Sbjct: 515 PDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKL 574
Query: 302 FDRMIESGIRPKMDTYVMLL------RKFGRWGFLRPVFVVWK 338
+M++ + P + +++ K+ ++ L P F V +
Sbjct: 575 LHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPKFPVQR 617
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 167/353 (47%), Gaps = 11/353 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+ +ID L K D + L MK IP+ ++ + + A +++ F++
Sbjct: 239 TYSIIIDGLCKVGREDEAKELFEEMKAQ-GMIPDVISYSTLIHGFCCAGKWDQSKHLFDE 297
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + G++ D V++ L+D LC+ V EA++L + L+ YN ++ G
Sbjct: 298 MVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLIT------YNSLIDG 351
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + RE + M +G+ D SY+ ++ CK+ K +A+ LY EM + G +
Sbjct: 352 FCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPN 411
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V Y T+++ + V A +++ M+ G + + LC+N + EA +
Sbjct: 412 VTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFN 471
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWG 328
E+ ++ Y C L K ++ LF+++ + G++P + TY +++ F + G
Sbjct: 472 ELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVG 531
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ ++++KMEE GC+PD AYN L+ + L+ K +M K +S
Sbjct: 532 QVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVS 584
>gi|356573388|ref|XP_003554843.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like [Glycine max]
Length = 491
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 174/387 (44%), Gaps = 25/387 (6%)
Query: 5 SCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
+ ++N K ALEFFN+ HF + + N + IL + FD +W L+ + S+
Sbjct: 63 ASHSNGLK-ALEFFNYSLVHSHFPLSPASLNMTLHILTRMRYFDKAWVLLRDIARTHPSL 121
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLD-------EFGLKDEVSYCNLVDALCEYKHV 117
+ I+ + + + F +++ EFG DE + L+ A C + +
Sbjct: 122 LTLKSMSIVLSKIAKFQSFEDTLDGFRRMEDEVFVGREFG-TDEFNV--LLKAFCTQRQM 178
Query: 118 IEAQELCFGENKNVGFSGLVE--MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVK 175
EA+ + F+ LV TK N++L G+ + F+ EM +RG
Sbjct: 179 KEARSV---------FAKLVPRFSPNTKSMNILLLGFKESGNVTSVELFYHEMVRRGFSP 229
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
D +++I +D CK G A++L +EM+++ + + T+I G+ D A +++
Sbjct: 230 DGVTFNIRIDAYCKKGCFGDALRLLEEMERRNVVPTIETITTLIHGAGLVRNKDKAWQLF 289
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP 295
+E+ N +I L + A +++ EM +K D +TYH F +
Sbjct: 290 KEIPSRNMVADAGAYNALITALVRTRDIESASSLMDEMVEKCIELDSVTYHTMFLGFMRS 349
Query: 296 REILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
R I G L+ +M +S PK T VML++ F + L +WK + E G P A
Sbjct: 350 RGIEGVSKLYQKMTQSNFVPKTRTVVMLMKYFCQNYRLDLSVCLWKYLVEKGYCPHAHAL 409
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKG 379
+ LV L +G++ A + ++M +G
Sbjct: 410 DLLVTGLCARGLVHDAFECSKQMLERG 436
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 179/386 (46%), Gaps = 28/386 (7%)
Query: 13 RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMK--DNPSSIPNHATF 70
+AL+FFNW + FTH +Y +++ILG+ +++ N + +K N + F
Sbjct: 101 KALQFFNWA-PELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFF 159
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENK 129
+ + Y A L E++ FN + G+ V++ +L+ L + AQ + F E
Sbjct: 160 NSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSV-FDEM- 217
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
S T +N+++RG+ K S + F++EM + DL +Y+ +D +C+
Sbjct: 218 ---LSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCR 274
Query: 190 SGKPWKAVKLYKEMKKKGIKM--DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
+GK A + M KK + DVV Y T++R + +D A+ V+ EM G +P+
Sbjct: 275 AGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNE 334
Query: 248 VTCNTVIKLLCENGRVREAYAVL-AEMPKKGCVPDVITY------HCFFRCLEKPREILG 300
+T NT+IK LCE ++ + + + G +PD T HC L E+
Sbjct: 335 ITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEV-- 392
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL-------GCSPDEFAYN 353
F++M+ +RP TY +L+R + G ++ ++ E GC+P AY
Sbjct: 393 -FEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYK 451
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKG 379
++ + L G A + ++ +G
Sbjct: 452 SMFEFLCRNGKTAKAERVFRQLMKRG 477
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 148/338 (43%), Gaps = 46/338 (13%)
Query: 84 NEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKT 142
++A+ FN E G ++ SY +++ L +++ A+ F + +G V++ +
Sbjct: 100 SKALQFFNWAPELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRS--NGTVKL-ED 156
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
+ +N ++R + K + + + + M GV + +++ + I+ K G+ A ++ E
Sbjct: 157 RFFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDE 216
Query: 203 M-KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
M G+ D +N +IR + VD R ++EM C P +VT NT++ LC G
Sbjct: 217 MLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAG 276
Query: 262 RVREAYAVLAEMPKKGC--VPDVITYHCFFR--CLEKP-REILGLFDRMIESGIRPKMDT 316
+V A+ V+ M KK PDV+TY R C++ E L +F+ M+ G++P T
Sbjct: 277 KVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEIT 336
Query: 317 YVMLLR-----------------KFGRWGF-------------------LRPVFVVWKKM 340
Y L++ G GF L V++KM
Sbjct: 337 YNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKM 396
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
L PD Y+ L+ L +G + A + +E+ K
Sbjct: 397 MVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEK 434
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 151/339 (44%), Gaps = 45/339 (13%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI-PNHATFRIMFKRYVTAHLVNEAMGTFN 91
TYN+++D L + + +++ N+++ M +++ P+ T+ + + Y H ++EA+ F
Sbjct: 264 TYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFE 323
Query: 92 KLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
++ GLK +E++Y L+ LCE + + + +++ G GF + T N ++
Sbjct: 324 EMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGF-----IPDTCTLNTLMN 378
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
E +E+M V D +YS+ + +C+ G +A +L+ E+ +K I +
Sbjct: 379 AHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILL 438
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
R+ GC P V ++ + LC NG+ +A V
Sbjct: 439 ----------------------------RDDGCTPLVAAYKSMFEFLCRNGKTAKAERVF 470
Query: 271 AEMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
++ K+G D +++ HC E E+L L M+ P ++TY L+
Sbjct: 471 RQLMKRG-TQDPLSFKILIKGHCREGTFEAGYELLVL---MLRRDFVPDLETYQSLIDGL 526
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
+ G + +KM + P+ +++++ L+ KG
Sbjct: 527 LQKGEPLVAYQTLEKMIKSSHVPETSTFHSILARLLAKG 565
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 170/382 (44%), Gaps = 20/382 (5%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A ++ +++ FN +++ + + T+NS++ IL K +++ ++ M P+
Sbjct: 169 AGLFQESVQVFNSMKS-VGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDT 227
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFG 126
TF I+ + + +V+E F ++ F D V+Y LVD LC V A + G
Sbjct: 228 YTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNG 287
Query: 127 ENKNVGFSGLVEMNKTKI-YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
K +N + Y ++RG+ + +EEM +G+ + +Y+ +
Sbjct: 288 MVKKS-----TNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIK 342
Query: 186 IMCKSGKPWKAVKLYK-EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+C+ K K ++++ + G D NT++ A + ++ A+ V+ +M + +
Sbjct: 343 GLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVR 402
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKK-------GCVPDVITYHCFFRCL---EK 294
P T + +I+ LC+ G A + E+ +K GC P V Y F L K
Sbjct: 403 PDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGK 462
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
+ +F ++++ G + + ++ +L++ R G + + M PD Y +
Sbjct: 463 TAKAERVFRQLMKRGTQDPL-SFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQS 521
Query: 355 LVDALIDKGMLDMARKYDEEMF 376
L+D L+ KG +A + E+M
Sbjct: 522 LIDGLLQKGEPLVAYQTLEKMI 543
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 105/240 (43%), Gaps = 34/240 (14%)
Query: 159 GKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG---IKMDVVAY 215
K +F+ + G + SY + ++I+ ++ A +K++ +K++ +
Sbjct: 100 SKALQFFNWAPELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFF 159
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
N++IR+ G + +++V+ M+ +G PSVVT N+++ +L + GR A +V EM
Sbjct: 160 NSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEM-- 217
Query: 276 KGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFV 335
+ TY G+ P T+ +L+R F + + F
Sbjct: 218 ------LSTY-----------------------GVTPDTYTFNILIRGFCKNSMVDEGFR 248
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+K+M C PD YN LVD L G +++A M K + P T LV+G
Sbjct: 249 FFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRG 308
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 151/328 (46%), Gaps = 16/328 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQ-- 121
PNH F I+ Y V++AM F+K+ + GL D V+Y ++ LC+ V +A
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431
Query: 122 -ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
E E + G +YN ++ W K +E EM RG+ D +
Sbjct: 432 FEQMIDERLSPG---------NIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFF 482
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ +D CK G+ ++ KL+ M + G+K +++ Y+T+I ++ +D A ++ M
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVS 542
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG 300
+G +P VT NT+I C+ R+ +A + EM G PD+ITY+ + L + R
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602
Query: 301 ---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
L+ + ESG + ++ TY ++L + +++ + + +N ++
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPR 385
AL+ G D A+ + A GL R
Sbjct: 663 ALLKVGRNDEAKDLFAALSANGLVPDVR 690
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 155/353 (43%), Gaps = 36/353 (10%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PN T+ I+ A ++ + + G + D +++ L+ LC K +A ++
Sbjct: 89 PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148
Query: 124 CFGENKNVG-----------FSGLVEMNKTK---------------------IYNMILRG 151
+G GL + N+++ Y ++ G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+FK K + EM RG++ ++ +Y+ + +CK+ KA+++ M K G+ +
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
YN+++ S A+ ++M G +P VVT N+++ LC+NGR EA +
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M K+G P++ TY + E+ GL D M+ +GI P + +L+ + + G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ +V+ KM + G +PD Y ++ L G ++ A +Y E+M + LS
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLS 441
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 172/407 (42%), Gaps = 81/407 (19%)
Query: 50 SWNLIHRMKDNPSSIP-NHATFRIMFKRYVTAHLVNEAMGTFNK-LDEFGLKDEVSYCNL 107
+ L+ M D+ P + ++ + + +++A GT+++ LD L + V+Y ++
Sbjct: 181 ALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSI 240
Query: 108 VDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEE 167
+ ALC+ + + +A E+ KN G+ M + YN I+ G+ + F ++
Sbjct: 241 IAALCKAQAMDKAMEVLTSMVKN----GV--MPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG---- 223
M GV D+ +Y+ MD +CK+G+ +A K++ M K+G+K ++ Y T+++
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 224 -----------VSEG--------------------VDFAMRVYREMREMGCQPSVVTCNT 252
V G VD AM V+ +MR+ G P VT T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCLEKPREIL------- 299
VI +LC++GRV +A +M + P I Y+ C F +K +E++
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 300 -------------------------GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
LFD M+ G++P + TY L+ + G +
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEAT 534
Query: 335 VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ M +G PD YN L++ ++ A EM + G+S
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVS 581
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 28/234 (11%)
Query: 165 WEEMDKRG---VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
+ M + G V +L +Y I + C +G+ + KKG ++D +A+ +++
Sbjct: 76 YNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 135
Query: 222 VGVSEGVDFAMR-VYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG--C 278
+ + AM V R M ++GC P+V + N ++K LC+ R +EA +L MP G C
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDC 195
Query: 279 VPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFV 335
PDV++Y K ++ G + M++ GI P + TY ++ + +
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAME 255
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELG 389
V M + G P+ YN++V G +P+E +G
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSG-------------------QPKEAIG 290
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 180/403 (44%), Gaps = 37/403 (9%)
Query: 14 ALEFFNWVETD-CHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
ALE F +E + CH TY S+I L + + + LI +M+++ + P T+
Sbjct: 477 ALEVFKLMEHEGCH--PNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGIT-PGVITYTT 533
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNV 131
+ + H + A F +++ GL DE +Y L DALC+ EA F K V
Sbjct: 534 LIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYS--FLVRKGV 591
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
+ + Y ++ G+ K E+M G DL++YS+ + +CK
Sbjct: 592 VLTKVT-------YTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQK 644
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV-DFAMRVYREMREMGCQPSVVTC 250
K +A+ + +M G+K ++VAY +I + + EG D A ++ EM G +PS T
Sbjct: 645 KLNEALSILDQMTVSGVKCNIVAYTIIISEM-IKEGKHDHAKSLFNEMISSGHKPSATTY 703
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIE 307
I C+ GR+ EA ++ EM + G PDV+TY+ F I RM++
Sbjct: 704 TVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVD 763
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFV-------------VWKKMEEL---GCSPDEFA 351
+ P TY +LL+ F + + +V VW+ +E + G +P
Sbjct: 764 ASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVT 823
Query: 352 YNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQ 394
Y++++ L+ A + M K +S P EE+ T L++
Sbjct: 824 YSSIIAGFCKATRLEEACVLLDHMLGKDIS--PNEEIYTMLIK 864
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 135/306 (44%), Gaps = 24/306 (7%)
Query: 99 KDEVSYCNLVDALCEYKHVIEAQELCF-----GENKNVGFSGLVEMNKTKIYNMILRGWF 153
++E SY L+ LCE + V EA L F G + N+ Y ++++G
Sbjct: 247 RNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNL-----------HTYTLLIKGLC 295
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
K R +EM RGVV + +Y+ +D CKSG+ A+ + M++ G D
Sbjct: 296 KEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDW 355
Query: 214 AYNTVIRAVGVSEG-VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
YN++I G+ G +D A + G P+V+T +I C+ R+ +A V +
Sbjct: 356 TYNSLI--YGLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSN 413
Query: 273 MPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M C D+ Y L K +E + M +G+ P + TY ++ + + G
Sbjct: 414 MISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGM 473
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELG 389
+ V+K ME GC P+ + Y +L+ LI L A +M G++ P
Sbjct: 474 VGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGIT--PGVITY 531
Query: 390 TKLVQG 395
T L+QG
Sbjct: 532 TTLIQG 537
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 120/262 (45%), Gaps = 6/262 (2%)
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
K YN+ LR + + + + + G++ D +Y+ + CK G A + +
Sbjct: 145 KCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCL 204
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
+++ G++MD N ++ + + A + M MGC+ + + +I+ LCE
Sbjct: 205 LRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARC 264
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVM 319
VREA ++ M GC ++ TY + L K I GL D M G+ P + TY
Sbjct: 265 VREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNA 324
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++ + + G ++ + ME+ GC+PD++ YN+L+ L G LD A + A+G
Sbjct: 325 MIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARG 383
Query: 380 LSAKPREELGTKLVQGGLDGEQ 401
+ P T L+ G E+
Sbjct: 384 FT--PTVITFTNLINGYCKAER 403
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 152/349 (43%), Gaps = 9/349 (2%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++ID K + + M+ N + P+ T+ + L +EA N
Sbjct: 321 TYNAMIDGYCKSGRMKDALGIKALMEQNGCN-PDDWTYNSLIYGLCGGKL-DEAEELLNG 378
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
G V ++ NL++ C+ + + +A + K+ S +++ + Y +++
Sbjct: 379 AIARGFTPTVITFTNLINGYCKAERIDDALRV-----KSNMISSNCKLD-LQAYGVLINV 432
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + +E EM G+ ++ +Y+ +D CK G A++++K M+ +G +
Sbjct: 433 LIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPN 492
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
Y ++I + + + AM + +M+E G P V+T T+I+ C+ A+ +
Sbjct: 493 AWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFE 552
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
M + G PD Y+ L K + ++ G+ TY L+ F + G
Sbjct: 553 MMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTD 612
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
V+ +KM GC D + Y+ L+ AL + L+ A ++M G+
Sbjct: 613 FAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGV 661
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 147/385 (38%), Gaps = 31/385 (8%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C +++ A F +E + T YN + D L K + +++ + R +
Sbjct: 539 CKKHEFDNAFRLFEMMEQN-GLTPDEQAYNVLTDALCKSGRAEEAYSFLVR----KGVVL 593
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
T+ + + A + A K+ G K D +Y L+ ALC+ K + EA +
Sbjct: 594 TKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSIL 653
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+ SG V+ N Y +I+ K + + EM G +Y++++
Sbjct: 654 ----DQMTVSG-VKCNIVA-YTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFI 707
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
CK G+ +A L EM++ G+ DVV YN I G +D A + M + C+
Sbjct: 708 SSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCE 767
Query: 245 PSVVTCNTVIKLLCENGRVREAYA----------------VLAEMPKKGCVPDVITYHCF 288
P+ T ++K + + Y +L M K G P V+TY
Sbjct: 768 PNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSI 827
Query: 289 FRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
K E L D M+ I P + Y ML++ M E G
Sbjct: 828 IAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGF 887
Query: 346 SPDEFAYNALVDALIDKGMLDMARK 370
P +Y+ L+ L D+G D A+
Sbjct: 888 QPQLESYHYLIVGLCDEGDYDRAKS 912
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 119/303 (39%), Gaps = 42/303 (13%)
Query: 133 FSGLVE---MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
+S LV+ + T YN ++ + K ++ + + G+ D ++ + + C+
Sbjct: 167 YSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCR 226
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
+ KA L M G + + +Y +I+ + + V A+ + M GC ++ T
Sbjct: 227 TSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHT 286
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR------------------- 290
+IK LC+ GR+ +A +L EMP +G VP V TY+
Sbjct: 287 YTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALME 346
Query: 291 ------------------CLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
C K E L + I G P + T+ L+ + + +
Sbjct: 347 QNGCNPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDD 406
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKL 392
V M C D AY L++ LI K L A++ EMFA GL+ P T +
Sbjct: 407 ALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLA--PNVVTYTSI 464
Query: 393 VQG 395
+ G
Sbjct: 465 IDG 467
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 80/190 (42%), Gaps = 7/190 (3%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A++ + + K + + YN +R++ + ++ ++Y + + G P VT NT+I
Sbjct: 128 AIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIM 187
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL-----EKPREILGLFDRMIESGI 310
C+ G + A+ + + G D TY C L R+ L M G
Sbjct: 188 AYCKKGSLAIAHRYFCLLRESGMQMD--TYTCNALLLGYCRTSDLRKACWLLMMMPLMGC 245
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
R +Y +L++ +R V+ M GCS + Y L+ L +G + AR
Sbjct: 246 RRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARG 305
Query: 371 YDEEMFAKGL 380
+EM +G+
Sbjct: 306 LLDEMPLRGV 315
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 98/229 (42%), Gaps = 24/229 (10%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVN----EAMG 88
TYN I+ G D +++ + RM D S PN T+ ++ K ++ L+N + G
Sbjct: 737 TYNIFINGCGHMGYIDRAFSTLKRMVD-ASCEPNCWTYWLLLKHFLKMSLINAHYVDTSG 795
Query: 89 TFN------------KLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSG 135
+N ++ + GL V +Y +++ C+ + EA C + +G
Sbjct: 796 MWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEA---CVLLDHMLGKD- 851
Query: 136 LVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK 195
+ N+ +IY M+++ + +GK F +M + G L SY + +C G +
Sbjct: 852 -ISPNE-EIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDR 909
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
A L+ ++ + VA+ + + + VDF ++ M C+
Sbjct: 910 AKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCR 958
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 183/407 (44%), Gaps = 42/407 (10%)
Query: 11 WKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
+++A++ + + D + TY ++D L K F + + RM N + + T+
Sbjct: 244 FEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMAN-NHQADTVTY 302
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENK 129
I+ + V+ A ++ + + GL +VS Y +L+ CE EA +
Sbjct: 303 GILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFW----D 358
Query: 130 NVGFSGLVEMNKTKI---------------------------------YNMILRGWFKMS 156
+ GFSG+ ++ I + ++ G +
Sbjct: 359 STGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENG 418
Query: 157 WWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
+ + E E+ G D+ SYS ++ CK G+ A ++YK M K G K + YN
Sbjct: 419 YANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYN 478
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
+I ++ A+++Y EM GC P+++T NT+I LC+ + +EA ++ EM ++
Sbjct: 479 ALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLER 538
Query: 277 GCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
G PD+ TY R L + +++ L ++D ++++G++ + + +L+ G +
Sbjct: 539 GFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEA 598
Query: 334 FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
F ++ +M+E CSP+ YN L+D + G +D A + GL
Sbjct: 599 FCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGL 645
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 158/341 (46%), Gaps = 36/341 (10%)
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL--DEFGLKDEVSYCNLVDALCEYKHVIE 119
S I T+ IM K + + +V+EA +L D D+V++ L+ LCE +
Sbjct: 363 SGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANR 422
Query: 120 AQELCFGENKNVG-----FSGLVEMNK-------------------------TKIYNMIL 149
A E+ + +N G FS +N+ + +YN ++
Sbjct: 423 AFEI-LEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALI 481
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G+ ++S + + EM G + +Y+ +D +CK+ K +A L KEM ++G K
Sbjct: 482 NGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFK 541
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
D+ Y ++IR + + VD A+R++ E+ + G Q V+ N +I LC G+V EA+ +
Sbjct: 542 PDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCI 601
Query: 270 LAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
EM +K C P+++TY+ F + + L+ ++++G++P + TY ++
Sbjct: 602 YLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCS 661
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
++ ++ G P ++ LV A+I G + +
Sbjct: 662 CNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQI 702
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 152/406 (37%), Gaps = 83/406 (20%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PN T+ I+ + V+ A+ F+ L G+ D V+Y L+ L ++ + A +L
Sbjct: 156 PNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDL 215
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDK-RGVVKDLHSYSI 182
E N G YN +L G F+ + K + WE++ + G +L +Y +
Sbjct: 216 -LDEMPNYGVQA-----DAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKV 269
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D +CK G+ +A +++ M + D V Y +I + S VD A RVY +M + G
Sbjct: 270 MLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAG 329
Query: 243 CQPSVVTCNTVIKLLCENGR----------------------------------VREAYA 268
V N++IK CE GR V EA
Sbjct: 330 LVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATE 389
Query: 269 VLAEMPKKG-CVPDVITYHCF-------------FRCLEKPR---EILGLFD-------- 303
+L ++ C PD +T+ F LE R E L +F
Sbjct: 390 LLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRF 449
Query: 304 --------------RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE 349
M++ G +P Y L+ F R + ++ +M GC P
Sbjct: 450 CKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTI 509
Query: 350 FAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
YN L+D L A +EM +G KP L++G
Sbjct: 510 ITYNTLIDGLCKAEKYQEASSLTKEMLERGF--KPDIRTYASLIRG 553
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 116/269 (43%), Gaps = 9/269 (3%)
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDK----RGVVKDLHSYSIYMDIMCKSGKPWKAVK 198
+ +N +L + + + F+ + R + +L +Y+I + +C G +AV
Sbjct: 120 RSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVS 179
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
L+ ++++G+ D V Y+T++ + + +D A+ + EM G Q V N ++
Sbjct: 180 LFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCF 239
Query: 259 ENGRVREAYAVLAEMPK-KGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKM 314
G +A V ++ + G P++ TY L K +E ++ RM+ + +
Sbjct: 240 RTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADT 299
Query: 315 DTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
TY +L+ R G + V+ M + G D YN+L+ + G A K+ +
Sbjct: 300 VTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDS 359
Query: 375 MFAKGLSAKPREELGTK-LVQGGLDGEQS 402
G+ + TK L+ G+ E +
Sbjct: 360 TGFSGIRQITTYNIMTKGLLDSGMVSEAT 388
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 8/155 (5%)
Query: 229 DFAMRVYREMREM-GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK----KGCVPDVI 283
D A+ +R++ + GC P V + NT++ R +A A A + + P++
Sbjct: 100 DAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQ 159
Query: 284 TYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
TY+ R L ++ + LF + G+ P TY L+ + L + +M
Sbjct: 160 TYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEM 219
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
G D YNAL+ GM + A K E++
Sbjct: 220 PNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQL 254
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 165/387 (42%), Gaps = 35/387 (9%)
Query: 11 WKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
W +ALE FNW+ +F T ++ ILG+ + L +++ + +A +
Sbjct: 62 WNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREEGYPLDVYA-Y 120
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV---------------SYCNLVDALCEYK 115
+ EA+G F ++ E G + + S+ N+++ E K
Sbjct: 121 TSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMK 180
Query: 116 -HVIEAQELCFGENKNVGFSGLVEMNKTKI---------------YNMILRGWFKMSWWG 159
I+ E + SG + T++ YN +L + K W+
Sbjct: 181 AQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYN 240
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+ +EM+ G + ++ +Y+ + ++G A ++ M KGI+ DV Y +++
Sbjct: 241 EAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLL 300
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
A + V+ AM +Y +MR C P+ T N +I + +N E + +M G
Sbjct: 301 SAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVE 360
Query: 280 PDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVV 336
PD++T++ K E+L +F M ++G P T+ +L+ +GR G +
Sbjct: 361 PDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSI 420
Query: 337 WKKMEELGCSPDEFAYNALVDALIDKG 363
+ M + GC+PD +N L+ AL +G
Sbjct: 421 YDGMLQAGCTPDLATFNTLLAALAREG 447
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 113/238 (47%), Gaps = 5/238 (2%)
Query: 148 ILRGWFKMSWWGKCREFWEEMDKR-GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
I++G + W K E + M + D + ++ + I+ + + +L+K ++++
Sbjct: 52 IMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREE 111
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE- 265
G +DV AY ++I A+ + A+ + +M+E G QPS+VT N +I L + GR E
Sbjct: 112 GYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWEN 171
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLR 322
+ EM +G PD TY+ E LF +M S P TY LL
Sbjct: 172 ILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLD 231
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+G+ G+ V K+ME GC P+ YN L+ A G+ + A + + M +KG+
Sbjct: 232 VYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGI 289
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 163/367 (44%), Gaps = 24/367 (6%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
+ A E F +++ + T TYN+++D+ GK ++ + N++ M ++ +PN T+
Sbjct: 205 EEATELFTQMKSS-NCTPDRVTYNALLDVYGKAGWYNEAANVLKEM-ESAGCLPNIVTYN 262
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKN 130
+ + A L N A + + G++ +V +Y +L+ A V +A E+
Sbjct: 263 ELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEI------- 315
Query: 131 VGFSGLVEMNKTK---IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
++ + N T +N ++ K + + +E+M GV D+ +++ +
Sbjct: 316 --YNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAF 373
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
K+G + +K+++ MKK G + D +N +I A G D A+ +Y M + GC P +
Sbjct: 374 GKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDL 433
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC------LEKPREILGL 301
T NT++ L GR A +L E+ + P+ I Y LEK +E++
Sbjct: 434 ATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDT 493
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
+ + + T+V++ K F+ M G D +NA++
Sbjct: 494 LHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLA---MRHHGYLSDTSTFNAMISMYGK 550
Query: 362 KGMLDMA 368
KGM+D A
Sbjct: 551 KGMMDKA 557
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 133/335 (39%), Gaps = 21/335 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+NS++ GK + + MK P+ ATF I+ + Y ++A+ ++
Sbjct: 365 TWNSLLGAFGKNGMYSEVLKVFRGMK-KAGFEPDKATFNILIEAYGRCGSSDQALSIYDG 423
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK------IYN 146
+ + G +++ N + A + E EL L E+N++ Y
Sbjct: 424 MLQAGCTPDLATFNTLLAALAREGRWEHAELI-----------LDELNRSSYKPNDIAYA 472
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
+L + K +E + + V ++ + K +A + M+
Sbjct: 473 SMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHH 532
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
G D +N +I G +D A + +R G +P VVT N ++ + G R+
Sbjct: 533 GYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKC 592
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRK 323
A L E G PD+++Y+ K ++ +F M+ +GI+P TY +
Sbjct: 593 EATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGC 652
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+ G V K M + GC PDE Y LVDA
Sbjct: 653 YVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDA 687
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/392 (19%), Positives = 154/392 (39%), Gaps = 22/392 (5%)
Query: 4 LSCYANDWK--RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
LS Y+ K +A+E +N + T + T + T+N++I + GK F + M+
Sbjct: 300 LSAYSRAGKVEQAMEIYNQMRTS-NCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACG 358
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQ 121
P+ T+ + + + +E + F + + G + + + N++ IEA
Sbjct: 359 VE-PDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNIL---------IEAY 408
Query: 122 ELCFGENKNVG-FSGLVEMNKT---KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
C ++ + + G+++ T +N +L + W +E+++ +
Sbjct: 409 GRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPND 468
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
+Y+ + G+ K ++ + + + T + VD A +
Sbjct: 469 IAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLA 528
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP-- 295
MR G T N +I + + G + +A A + G PDV+TY+C +
Sbjct: 529 MRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGM 588
Query: 296 -REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
R+ + +G P + +Y ++ + + G L ++ +M G PD F YN
Sbjct: 589 YRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNT 648
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLSAKPRE 386
V ++ GM A + M G KP E
Sbjct: 649 FVGCYVNGGMFPEALSVVKHMHKTG--CKPDE 678
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+YN+VI K + + + H M N P+ T+ YV + EA+
Sbjct: 610 SYNTVIFSYSKHGQLSSATRIFHEMVSNGIQ-PDSFTYNTFVGCYVNGGMFPEALSVVKH 668
Query: 93 LDEFGLK-DEVSYCNLVDALCE 113
+ + G K DEV+Y LVDA C+
Sbjct: 669 MHKTGCKPDEVTYRTLVDAYCK 690
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 152/320 (47%), Gaps = 10/320 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+H F I F Y ++++AM FNK+ + GL + V+Y L+DALC+ V +A E+
Sbjct: 372 PDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDA-EV 430
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + N G + ++N ++ G + W + E EM +G+ + ++
Sbjct: 431 KFNQMINEGVTP-----NIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTL 485
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ +C G+ + +L M+ G++ D +Y +I ++ D A +V+ M +G
Sbjct: 486 ICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGL 545
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILG 300
P+ VT NT++ C R+ +AY + EM +KG P V+TY+ L + + E
Sbjct: 546 SPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKE 605
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L+ MI SG + + TY ++L + + F +++ + G + + ++ AL+
Sbjct: 606 LYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALL 665
Query: 361 DKGMLDMARKYDEEMFAKGL 380
G + A + A GL
Sbjct: 666 KGGRKEDAMDLFAAIPANGL 685
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 141/324 (43%), Gaps = 12/324 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PN T+ I+ R+ + F + + G + D ++ L+ LC K V EA ++
Sbjct: 88 PNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDV 147
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM---DKRGVVKDLHSY 180
+G M T Y ++L+G + E M R ++ SY
Sbjct: 148 LLQRMPELGC-----MPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSY 202
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
SI ++ G+ K L+ EM +GI DVV Y TVI + ++ D A V+++M +
Sbjct: 203 SIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMID 262
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---RE 297
G +P+ T N +I G+ +E +L EM +G PD TY L K RE
Sbjct: 263 NGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCRE 322
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
FD MI GI+PK+ TY +L+ + G L + M E G SPD +N
Sbjct: 323 ARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFS 382
Query: 358 ALIDKGMLDMARKYDEEMFAKGLS 381
A GM+D A +M GLS
Sbjct: 383 AYAKCGMIDKAMDIFNKMRQHGLS 406
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 157/360 (43%), Gaps = 25/360 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +VID L K FD + + +M DN PN+ T+ + Y++ E + +
Sbjct: 236 TYTTVIDGLCKAQLFDRAEGVFQQMIDNGFK-PNNYTYNCLIHGYLSIGKWKEVVQMLEE 294
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIYNMI 148
+ GLK D +Y +L++ LC+ EA+ F ++ K Y ++
Sbjct: 295 MSARGLKPDCYTYGSLLNYLCKNGRCREARFF---------FDSMIRKGIKPKVSTYGIL 345
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G+ + F + M + G+ D H ++I+ K G KA+ ++ +M++ G+
Sbjct: 346 IHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGL 405
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+VV Y +I A+ VD A + +M G P++V N+++ LC + A
Sbjct: 406 SPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEE 465
Query: 269 VLAEMPKKGCVPDVITYHCFF-------RCLEKPREILGLFDRMIESGIRPKMDTYVMLL 321
++ EM +G P+ + ++ R +E R L D M G+RP +Y L+
Sbjct: 466 LVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRR----LIDLMEHVGVRPDAFSYTPLI 521
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ G V+ M +G SP E YN L+ +D A EM KG++
Sbjct: 522 SGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVT 581
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 153/353 (43%), Gaps = 50/353 (14%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+NS++ L +++ + L++ M D PN F + V E +
Sbjct: 446 VFNSLVYGLCTVDKWERAEELVYEMLDQ-GICPNAVFFNTLICNLCNVGRVMEGRRLIDL 504
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVE--MNKTKI-YNMI 148
++ G++ D SY L+ C EA+++ F G+V ++ T++ YN +
Sbjct: 505 MEHVGVRPDAFSYTPLISGYCLTGRTDEAEKV---------FDGMVSIGLSPTEVTYNTL 555
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
L G+ S + EM ++GV + +Y+ + + ++ + +A +LY M G
Sbjct: 556 LHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGT 615
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
K D+ YN ++ + S VD A ++++ + G Q +++T +I L + GR +A
Sbjct: 616 KCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMD 675
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+ A +P G VP+V+TY + + +IE G + D+
Sbjct: 676 LFAAIPANGLVPNVVTYRL-------------VAENLIEEGSLEEFDS------------ 710
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY----DEEMFA 377
++ ME+ G +P+ NALV L+ +G + A Y DE F+
Sbjct: 711 -------LFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFS 756
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 13/218 (5%)
Query: 173 VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM 232
V +L +YSI + C+ G + + K G +MD +A N +++ + + V AM
Sbjct: 86 VAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAM 145
Query: 233 RV-YREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK---KGCVPDVITY--- 285
V + M E+GC P V+ ++K LC R EA +L M + C P+V++Y
Sbjct: 146 DVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIV 205
Query: 286 -HCFFR--CLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE 342
+ FF ++KP LF MI+ GI P + TY ++ + V+++M +
Sbjct: 206 INGFFTEGQVDKP---YNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMID 262
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G P+ + YN L+ + G + EEM A+GL
Sbjct: 263 NGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGL 300
>gi|168012346|ref|XP_001758863.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690000|gb|EDQ76369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 367
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 160/330 (48%), Gaps = 10/330 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY V+ +LG+ + L M + + H +F M Y L +A +
Sbjct: 12 TYTLVLGVLGRAGLTIQARELFDEMLSSGVEVGLH-SFNSMIGAYARKGLFKKAWRMYED 70
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G++ DE++ L+ + + + +E E F + K G + + + YN +L
Sbjct: 71 MVESGIQADEITLSTLLSGVGKTQLPVETAEKIFSKIKENGI-----LPRVETYNTLLSV 125
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ +C+E EM + VV ++ +++ + + + G+ +A ++Y+ + G+K
Sbjct: 126 LSRGGHTERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDAGLKPT 185
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
VV Y +++ + A+ V+ EMR +GC+P ++ + +I + + G EA V
Sbjct: 186 VVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAEEAALVFR 245
Query: 272 EMPKKGCVPDVITYHCFFRCLE---KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
++ G +P+V+T+ C + K +EI F+ M+ SG P + Y +++ +GR+G
Sbjct: 246 QLQNDGYIPNVVTWCCLIQAFGWQGKMQEIGAFFNEMLASGCLPDLTLYNVMMGAYGRYG 305
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+++++M+ G SP+ +Y+ ++ A
Sbjct: 306 HSVQAAILFRRMQAQGISPNAVSYDTMIQA 335
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 184/399 (46%), Gaps = 25/399 (6%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
AN A+E F E+ T YN+++ + + F+ + + M++ P+
Sbjct: 243 ANQEGIAVEIFAKAES--VIADTVQVYNAMMGVYARNGNFEKVNEMFNLMRERGCE-PDI 299
Query: 68 ATFRIMFKRYVT--AHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
+F + V A + A+ +++ +FGL+ D ++Y L+ A ++ EA
Sbjct: 300 VSFNTLINAKVKSCATVSGLAIELLDEVGKFGLRPDIITYNTLISACSRESNLKEA---- 355
Query: 125 FGENKNVGFSGLVEMNKTK----IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+G +E N+ + YN ++ + + + K +E++ G D +Y
Sbjct: 356 ------IGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTY 409
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ + K G K + +EM K G D + YNT+I G D A+R+YR+M+
Sbjct: 410 NSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKS 469
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH---CFFRCLEKPRE 297
G P VT +I LL + ++ EA V++EM G P + TY C + + + E
Sbjct: 470 SGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTYSALICAYAKVGRRVE 529
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
F+RM ESGI+ Y ++L F R+ ++ ++++M E G +PD Y ++
Sbjct: 530 AEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAAALYQEMIEAGFTPDTGLYEVMLP 589
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGG 396
AL+ + M D+ + ++ K L + ++ + LV+GG
Sbjct: 590 ALVRENMGDVIERVVQD--TKELGSMNPHDISSVLVKGG 626
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 108/240 (45%), Gaps = 3/240 (1%)
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
K++N ++ + + + R + M + G + S + + + G+ + + +E
Sbjct: 825 KVWNALIHAYAFSGCYERARAIFNTMMREGPSPTVESVNGLLQALIVDGRLSELYVVIQE 884
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
++ +K+ + ++ A + + +VY M+ G P++ +I LLC R
Sbjct: 885 LQDMDLKISKSSILLMLEAFAQAGNLFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCRFKR 944
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI--LGLFDRMIE-SGIRPKMDTYVM 319
VR+ +L+EM + G PD+ ++ + E +G+ +MI+ +G+ P +TY
Sbjct: 945 VRDVRVMLSEMGEAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNT 1004
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L+ + R + KM+ LG P Y +++ A + + D A + EE+ + G
Sbjct: 1005 LITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNG 1064
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/265 (18%), Positives = 105/265 (39%), Gaps = 39/265 (14%)
Query: 137 VEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKA 196
++++K+ I ++L + + + ++ + M G +H Y + + ++C+ +
Sbjct: 890 LKISKSSIL-LMLEAFAQAGNLFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCRFKRVRDV 948
Query: 197 VKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKL 256
+ EM + G K D+ +N+V++ E +Y+ +++ G P T NT+I +
Sbjct: 949 RVMLSEMGEAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITM 1008
Query: 257 LCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP--------------------- 295
C + R E +++ +M G P TY K
Sbjct: 1009 YCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLD 1068
Query: 296 -----------------REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWK 338
++ L + M E+GI P T +L+ +G+ G + K
Sbjct: 1069 RSFYHLMMKMYRTSGDHQKAENLLEIMKEAGIEPNTATMHLLMVSYGKSGQPEEADRILK 1128
Query: 339 KMEELGCSPDEFAYNALVDALIDKG 363
+ +G D Y++++DA + KG
Sbjct: 1129 NLRTMGAVLDTLPYSSVIDAYLKKG 1153
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/346 (19%), Positives = 124/346 (35%), Gaps = 69/346 (19%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F +NSV+ + EF + +I++M + P+ T+ + Y H E
Sbjct: 960 FKPDLQIFNSVLKLYSSIEEFQ-NMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEG 1018
Query: 87 MGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYN 146
+ +K+ GL+ K Y
Sbjct: 1019 LSLMHKMKSLGLEP----------------------------------------KRDTYR 1038
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++ + K + + E +EE+ G D Y + M + SG KA L + MK+
Sbjct: 1039 SMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEA 1098
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
GI+ + + ++ + G S + A R+ + +R MG + ++VI + G +
Sbjct: 1099 GIEPNTATMHLLMVSYGKSGQPEEADRILKNLRTMGAVLDTLPYSSVIDAYLKKGDAKAG 1158
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
L EM + PD + CF R + + +++ LL
Sbjct: 1159 IEKLTEMKEAAIEPDHRIWTCFIRA----------------ASLSGEVNDANNLLNALQA 1202
Query: 327 WGFLRPVFVVWKKMEELGCSPDE-----------FAYNALVDALID 361
GF P+ ++ +K E L D+ A+N V+AL+D
Sbjct: 1203 VGFDLPIRLLGEKSESLVSEVDQCLGRLEHVEDNAAFN-FVNALVD 1247
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/254 (18%), Positives = 107/254 (42%), Gaps = 42/254 (16%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP--WKAVK-LY 200
+Y ++ + ++ + + +K ++ D + I +DI+ GK W++ + +
Sbjct: 754 LYQSMVSVYCRIGFPETAQHLLYHAEKNDIILDNVTVHI-IDIIETYGKLKMWQSAESIV 812
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
+ ++++ KMD +N +I A S + A ++ M G P+V + N +++ L +
Sbjct: 813 ENLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMREGPSPTVESVNGLLQALIVD 872
Query: 261 GRVREAYAVLAE-----------------------------------MPKKGCVPDVITY 285
GR+ E Y V+ E M G P + Y
Sbjct: 873 GRLSELYVVIQELQDMDLKISKSSILLMLEAFAQAGNLFEVQKVYNGMKAAGYFPTMHLY 932
Query: 286 HCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE 342
L ++ R++ + M E+G +P + + +L+ + + + V+++ +++
Sbjct: 933 RLMIGLLCRFKRVRDVRVMLSEMGEAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQD 992
Query: 343 LGCSPDEFAYNALV 356
G +PDE YN L+
Sbjct: 993 AGLAPDEETYNTLI 1006
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 78/193 (40%), Gaps = 21/193 (10%)
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
I+CK+GK A++ Y+ G Y ++I SE D A +++ +MR G +P
Sbjct: 691 ILCKAGKLDAALEEYRSRGGLGTFRSCTMYESLIHECTKSEQFDIASQLFSDMRFNGVEP 750
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRM 305
S +++ + C G A +L K + D +T H +I+ + ++
Sbjct: 751 SECLYQSMVSVYCRIGFPETAQHLLYHAEKNDIILDNVTVHII--------DIIETYGKL 802
Query: 306 --------IESGIR---PKMDTYV--MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
I +R KMD V L+ + G ++ M G SP +
Sbjct: 803 KMWQSAESIVENLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMREGPSPTVESV 862
Query: 353 NALVDALIDKGML 365
N L+ ALI G L
Sbjct: 863 NGLLQALIVDGRL 875
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 179/401 (44%), Gaps = 28/401 (6%)
Query: 6 CYANDWKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C A W R + V C T+N++I L + F+ ++ +M D+ +
Sbjct: 236 CMAKRWGRVQDLMEEMVRVGC--PPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCT- 292
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ + + + A +++ +GLK + V Y ++ LC + +A+EL
Sbjct: 293 PDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEEL 352
Query: 124 CFGENKNVGFSGLVEM--NKTKI----YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
L EM N + +N+++ + + + E E+M + G V D+
Sbjct: 353 ------------LAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDV 400
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
+Y+ ++ CK G +AV L K M G + + ++Y V++ + +E A + +
Sbjct: 401 ITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQ 460
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP-- 295
M E GC P+ VT NTVI LC+ G V +A +L +M GC PD+I+Y L K
Sbjct: 461 MIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGK 520
Query: 296 -REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
E L L + M+ G+ P Y + + G + V ++ ++++ D YNA
Sbjct: 521 TDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNA 580
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
++ +L +G D A ++ M + G P E T L++G
Sbjct: 581 VISSLCKRGGTDRAIEFLAYMVSSG--CMPNESTYTILIRG 619
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 141/340 (41%), Gaps = 51/340 (15%)
Query: 85 EAMGTFNKLDEFGLKDEVSYCNLV-DALCEYK-HVIEAQELCFGENKNVGFSGLVEMNKT 142
A+ L G +V CNLV +A+C+ V EA L + G V
Sbjct: 171 SAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVS--- 227
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDK-------------------------------- 170
YN +L+G WG+ ++ EEM +
Sbjct: 228 --YNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQ 285
Query: 171 ---RGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
G D+ Y+ +D +CK G A ++ M G+K +VV YNTV++ + +E
Sbjct: 286 MVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAER 345
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
+ A + EM + C VT N ++ C+NG V +L +M + GCVPDVITY
Sbjct: 346 WEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTT 405
Query: 288 FFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFG---RWGFLRPVFVVWKKME 341
K E + L M G RP +Y ++L+ RW + +M
Sbjct: 406 VINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLM---SQMI 462
Query: 342 ELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
E GCSP+ +N +++ L KG+++ A + ++M G S
Sbjct: 463 EQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCS 502
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 139/323 (43%), Gaps = 55/323 (17%)
Query: 103 SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCR 162
+Y +V ALC + +A + E + G + + M Y++IL G R
Sbjct: 117 TYFPVVRALCARGRIADALSV-LDEMRRRGCAPIPPM-----YHVILEAACSRGGGGGFR 170
Query: 163 E---FWEEMDKRGVVKDLHSYSIYMDIMC-KSGKPWKAVKLYKEMKKK-GIKMDVVAYNT 217
+++ RG D+ + ++ ++ +C + G +A++L +++ G DVV+YN
Sbjct: 171 SAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNA 230
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
V++ + +++ + EM +GC P+VVT NT+I LC NG + VLA+M G
Sbjct: 231 VLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHG 290
Query: 278 CVPDVITYH------CFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG---RW- 327
C PD+ Y C LE EIL DRM G++P + Y +L+ RW
Sbjct: 291 CTPDIRMYATVLDGVCKEGHLEVAHEIL---DRMPSYGLKPNVVCYNTVLKGLCSAERWE 347
Query: 328 -------------------------------GFLRPVFVVWKKMEELGCSPDEFAYNALV 356
G + V + ++M E GC PD Y ++
Sbjct: 348 QAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVI 407
Query: 357 DALIDKGMLDMARKYDEEMFAKG 379
+ +G++D A + M A G
Sbjct: 408 NGFCKEGLIDEAVMLLKSMAACG 430
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 132/294 (44%), Gaps = 21/294 (7%)
Query: 6 CYANDWKRALEFF-NWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKD--NPS 62
C A W++A E + DC T +N ++D F + L + +I ++
Sbjct: 341 CSAERWEQAEELLAEMFDNDCPLDDVT--FNILVDF---FCQNGLVYRVIELLEQMLEHG 395
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQ 121
+P+ T+ + + L++EA+ + G + + +SY ++ LC + ++A+
Sbjct: 396 CVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAE 455
Query: 122 ELCFGENKNVGFSGLVEMNKTK---IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
+L S ++E + +N ++ K + E ++M G DL
Sbjct: 456 DL---------MSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLI 506
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
SYS +D + K+GK +A++L M KG+ + + Y+++ A+ ++ ++++ +
Sbjct: 507 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNI 566
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
+++ + V N VI LC+ G A LA M GC+P+ TY R L
Sbjct: 567 QDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGL 620
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 69/187 (36%), Gaps = 49/187 (26%)
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF--------------- 289
P+ T V++ LC GR+ +A +VL EM ++GC P YH
Sbjct: 113 PNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSA 172
Query: 290 -RCLEKPR--------------------------EILGLFDRMIES-GIRPKMDTYVMLL 321
R L+ E L L + S G P + +Y +L
Sbjct: 173 VRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVL 232
Query: 322 RKF---GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+ RWG ++ + ++M +GC P+ +N L+ L G+ + + +M
Sbjct: 233 KGLCMAKRWGRVQDLM---EEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDH 289
Query: 379 GLSAKPR 385
G + R
Sbjct: 290 GCTPDIR 296
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 168/372 (45%), Gaps = 19/372 (5%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
AL FF + F HT T+ +I L + D L+ +MK + F +
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHC-SEDLFISV 117
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGF 133
Y L A+ F ++ EFG V N V ++ I+ + + + K GF
Sbjct: 118 ISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGF 177
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
V YN++L+ K + ++ EM +G D SY+ + MC+ G
Sbjct: 178 EPNV-----FTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVG-- 230
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
VK +E+ ++ + V YN +I + A + REM E G P+V++ +T+
Sbjct: 231 --LVKEGRELAER-FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTL 287
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYH-----CFFRCLEKPREILGLFDRMIES 308
I +LC +G++ A++ L +M K+GC P++ T CF R + L L+++MI
Sbjct: 288 INVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLR--GTTFDALDLWNQMIRG 345
Query: 309 -GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
G++P + Y L++ F G + V+ MEE+GCSP+ Y +L++ +G LD
Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDG 405
Query: 368 ARKYDEEMFAKG 379
A +M G
Sbjct: 406 AVYIWNKMLTSG 417
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 170/370 (45%), Gaps = 20/370 (5%)
Query: 12 KRALEFFNWV-ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
+RA+E F + E C + YN V+D L + + + MK + PN T+
Sbjct: 128 ERAVEMFYRIKEFGCD--PSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE-PNVFTY 184
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENK 129
++ K + V+ A ++ G D VSY ++ ++CE V E +EL
Sbjct: 185 NVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELA----- 239
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
F +V +YN ++ G K + E EM ++G+ ++ SYS ++++C
Sbjct: 240 -ERFEPVVS-----VYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCN 293
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM-REMGCQPSVV 248
SG+ A +M K+G ++ +++++ + A+ ++ +M R G QP+VV
Sbjct: 294 SGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVV 353
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRM 305
NT+++ C +G + +A +V + M + GC P++ TY K + G ++++M
Sbjct: 354 AYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKM 413
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
+ SG P + Y ++ R + + + M + C+P +NA + L D G L
Sbjct: 414 LTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRL 473
Query: 366 DMARKYDEEM 375
D A K +M
Sbjct: 474 DWAEKVFRQM 483
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 123/287 (42%), Gaps = 52/287 (18%)
Query: 102 VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK----TKIYNM--ILRGWFKM 155
+SY L++ LC + + FS L +M K IY + +++G F
Sbjct: 282 ISYSTLINVLCNSGQI------------ELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLR 329
Query: 156 SWWGKCREFWEEMDKR-GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVA 214
+ W +M + G+ ++ +Y+ + C G KAV ++ M++ G ++
Sbjct: 330 GTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRT 389
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
Y ++I +D A+ ++ +M GC P+VV +++ LC + + +EA +++ M
Sbjct: 390 YGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS 449
Query: 275 KKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
K+ C P V T++ F + GL D GR + VF
Sbjct: 450 KENCAPSVPTFNAFIK---------GLCDA--------------------GRLDWAEKVF 480
Query: 335 VVWKKMEELG-CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
++ME+ C P+ YN L+D L ++ A E+F +G+
Sbjct: 481 ---RQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGV 524
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 106/236 (44%), Gaps = 9/236 (3%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
E + + + G + Y+ +D + + +Y++MK+ G + +V YN +++A+
Sbjct: 132 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 191
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
+ VD A ++ EM GC P V+ TVI +CE G V+E LAE + P V
Sbjct: 192 CKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE-LAERFE----PVV 246
Query: 283 ITYHCFFRCLEKPREILGLFD---RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
Y+ L K + G F+ M+E GI P + +Y L+ G + F +
Sbjct: 247 SVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ 306
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
M + GC P+ + ++LV +G A +M +G +P LVQG
Sbjct: 307 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI-RGFGLQPNVVAYNTLVQG 361
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/406 (19%), Positives = 168/406 (41%), Gaps = 44/406 (10%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C +D+K A E + + + +Y+++I++L + +L+++ + +M P
Sbjct: 257 CKEHDYKGAFELMREM-VEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCH-P 314
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDE-FGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
N T + K +A+ +N++ FGL+ + V+Y LV C + ++++A +
Sbjct: 315 NIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSV 374
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRG--------WFKMSWWGKC-------------- 161
F + +G S + + I RG W KM G C
Sbjct: 375 -FSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALC 433
Query: 162 --------REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG-IKMDV 212
E M K + +++ ++ +C +G+ A K++++M+++ ++
Sbjct: 434 RHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNI 493
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V YN ++ + + ++ A + RE+ G + S T NT++ C G A ++ +
Sbjct: 494 VTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGK 553
Query: 273 MPKKGCVPDVITYHCFFR--CLEKPREILGLFDRMIESGI---RPKMDTYVMLLRKFGRW 327
M G PD IT + C + E ++ G RP + +Y ++ R
Sbjct: 554 MMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRS 613
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDE 373
++ ++M G P ++ L++ I + D+ R +D+
Sbjct: 614 NCREDGVILLERMISAGIVPSIATWSVLINCFI---LDDIVRAHDQ 656
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 187/426 (43%), Gaps = 81/426 (19%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T T+N++I+ L + + L+ RM +N P+ T+ + + + A
Sbjct: 158 TTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQ-PDMVTYNSIVNGICRSGDTSLAFDML 216
Query: 91 NKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
K++E +K +V +Y ++D+LC I+A F E + G V YN ++
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCR-DGCIDAAISLFKEMETKGIKSSVV-----TYNSLV 270
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
RG K W ++M R +V ++ ++++ +D+ K GK +A +LYKEM +GI
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 210 MDVVAYNT-----------------------------------VIRAVGVSEGVDFAMRV 234
+++ YNT +I+ + + VD M+V
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390
Query: 235 YREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF------ 288
+R + + G + VT + +++ C++G+++ A + EM G +PDV+TY
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD 450
Query: 289 ----------FRCLEKPREILG--LFDRMIES--------------------GIRPKMDT 316
F L+K + LG ++ +IE G++P + T
Sbjct: 451 NGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 510
Query: 317 YVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
Y +++ + G L ++ +KMEE G +P++ YN L+ A + G L + K EEM
Sbjct: 511 YTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Query: 377 AKGLSA 382
+ G SA
Sbjct: 571 SCGFSA 576
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 168/362 (46%), Gaps = 16/362 (4%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A+ F +ET + TYNS++ L K +++ L+ M +PN TF ++
Sbjct: 247 AISLFKEMETK-GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-EIVPNVITFNVL 304
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVG 132
+V + EA + ++ G+ + +Y L+D C + EA + +N
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
+V + +++G+ + + + + KRG+V + +YSI + C+SGK
Sbjct: 365 SPDIVT------FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 418
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
A +L++EM G+ DV+ Y ++ + + ++ A+ ++ ++++ +V T
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESG 309
+I+ +C+ G+V +A+ + +P KG P+V+TY L K E L +M E G
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL----IDKGML 365
P TY L+R R G L + ++M+ G S D + ++D L +DK L
Sbjct: 539 NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSFL 598
Query: 366 DM 367
DM
Sbjct: 599 DM 600
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 132/276 (47%), Gaps = 19/276 (6%)
Query: 109 DALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM 168
DA+ ++ +I ++ L + + FS + +TK +N++L +F +++
Sbjct: 71 DAIALFQEMIRSRPLPGLVDFSRFFSAIA---RTKQFNLVL-------------DFCKQL 114
Query: 169 DKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV 228
+ G+ ++++ +I ++ C+ K A + ++ K G + D +NT+I + + V
Sbjct: 115 ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKV 174
Query: 229 DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
A+ + M E GCQP +VT N+++ +C +G A+ +L +M ++ DV TY
Sbjct: 175 SKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTI 234
Query: 289 FRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
L + I + LF M GI+ + TY L+R + G ++ K M
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
P+ +N L+D + +G L A + +EM +G+S
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
Query: 170 KRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVD 229
K G D +++ ++ +C GK KAV L M + G + D+V YN+++ + S
Sbjct: 151 KLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTS 210
Query: 230 FAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF 289
A + R+M E + V T +T+I LC +G + A ++ EM KG V+TY+
Sbjct: 211 LAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 290 RCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
R L K + L M+ I P + T+ +LL F + G L+ ++K+M G S
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 347 PDEFAYNALVDA 358
P+ YN L+D
Sbjct: 331 PNIITYNTLMDG 342
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 120/238 (50%), Gaps = 6/238 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G+ + R M V D ++Y+ + ++C G+ A+ L +M
Sbjct: 114 YNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDML 170
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
++G + +VV Y ++ A+ + G + AM V EMR GC P++VT N +I +C GRV
Sbjct: 171 RRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 230
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLL 321
+A +L +P G PD ++Y + L + ++ LF M+E P T+ ML+
Sbjct: 231 DARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLI 290
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R F R G + V ++M E GC+ + N +++++ +G +D A K +M + G
Sbjct: 291 RFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYG 348
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 170/388 (43%), Gaps = 49/388 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +++ + + F+ + ++ M+ PN T+ ++ V++A N+
Sbjct: 180 TYTVLLEAMCRNSGFEQAMAVLDEMRAK-GCTPNIVTYNVIINGMCREGRVDDARELLNR 238
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIYNMI 148
L +G + D VSY L+ LC K + +EL F+ ++E N ++M+
Sbjct: 239 LPSYGFQPDTVSYTTLLKGLCASKRWDDVEEL---------FAEMMEKNCMPNEVTFDML 289
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+R + + + + E+M + G + +I ++ +CK G+ A KL +M G
Sbjct: 290 IRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGC 349
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
D ++Y TV++ + +E D A + EM C P+ VT NT I +LC+ G + +A
Sbjct: 350 NPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIM 409
Query: 269 VLAEMPKKGCVPDVITYHC----------------FFRCLE-KPREIL------------ 299
++ +M + GC V+TY+ FR + KP I
Sbjct: 410 LIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAE 469
Query: 300 ------GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
L M+ P + T+ +L+ F + GFL + ++M E GC+P+ YN
Sbjct: 470 RLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYN 529
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGLS 381
L+D + + A + + +KG+S
Sbjct: 530 TLLDGITKDCSSEDALELLHGLVSKGVS 557
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/405 (20%), Positives = 173/405 (42%), Gaps = 45/405 (11%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F T +Y +++ L +D L M + + +PN TF ++ + + +V A
Sbjct: 244 FQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEK-NCMPNEVTFDMLIRFFCRGGMVERA 302
Query: 87 MGTFNKLDEFGLKDEVSYCNLV-DALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
+ ++ E G + CN+V +++C+ V +A +L ++G G T Y
Sbjct: 303 IQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLL----NDMGSYGCNP--DTISY 356
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
+L+G + W +E EM + + +++ ++ I+C+ G +A+ L ++M +
Sbjct: 357 TTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSE 416
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR----------------------------- 236
G + VV YN ++ V +D A+ ++R
Sbjct: 417 HGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDGAAE 476
Query: 237 ---EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE 293
EM C P+VVT N ++ C+ G + EA ++ +M + GC P++ITY+ +
Sbjct: 477 LVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGIT 536
Query: 294 K---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF 350
K + L L ++ G+ P + T+ ++ + + ++ ++++G P
Sbjct: 537 KDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAV 596
Query: 351 AYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
YN ++ L + +D A + M + G P E L++G
Sbjct: 597 VYNKILLGLCKRCEIDNAIDFFAYMVSNG--CMPNESTYIILIEG 639
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 108/250 (43%), Gaps = 41/250 (16%)
Query: 172 GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT-------------- 217
G D++ + + +C+ G+ A ++ + + G +DV AYNT
Sbjct: 71 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 130
Query: 218 ------------------VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCE 259
+IR + V A+ + +M GCQP+VVT +++ +C
Sbjct: 131 RRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCR 190
Query: 260 NGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDT 316
N +A AVL EM KGC P+++TY+ C E + + L +R+ G +P +
Sbjct: 191 NSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVS 250
Query: 317 YVMLLRKF---GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDE 373
Y LL+ RW + +F +M E C P+E ++ L+ GM++ A + E
Sbjct: 251 YTTLLKGLCASKRWDDVEELFA---EMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLE 307
Query: 374 EMFAKGLSAK 383
+M G +
Sbjct: 308 QMTEHGCATN 317
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 121/302 (40%), Gaps = 35/302 (11%)
Query: 6 CYANDWKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C A W A E N V +C T +N+ I IL + + + LI +M ++ ++
Sbjct: 364 CRAERWDDAKELLNEMVRNNCPPNEVT--FNTFICILCQKGLIEQAIMLIEQMSEHGCTV 421
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELC 124
T+ + + ++ A+ F + + ++Y L+ LC + + A EL
Sbjct: 422 -GVVTYNALVNGFCVQGHIDSALELFRSMP--CKPNTITYTTLLTGLCNAERLDGAAELV 478
Query: 125 FGENKN------VGFSGLVEMNKTK-----------------------IYNMILRGWFKM 155
+ V F+ LV K YN +L G K
Sbjct: 479 AEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKD 538
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
E + +GV D+ ++S + I+ K + +AV+L+ ++ G++ V Y
Sbjct: 539 CSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVY 598
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
N ++ + +D A+ + M GC P+ T +I+ L G ++EA +L+ +
Sbjct: 599 NKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCS 658
Query: 276 KG 277
+G
Sbjct: 659 RG 660
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 167/382 (43%), Gaps = 13/382 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A ALE ++ T T TYN +ID L K + + + M + P
Sbjct: 172 CKARKMDCALEMLAQMK-KAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCK-P 229
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG--LKDEVSYCNLVDALCEYKHVIEAQEL 123
+ T+ I+ + A + A + + D +Y +VD L + K + EA L
Sbjct: 230 DVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVAL 289
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ + +G T YN +L G KM + + ++ G D+ +Y+
Sbjct: 290 ----MEKITANGCTPTIAT--YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 343
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D + K + ++A KL+KEM +G+ +D V Y +IR + + + A VY+ M GC
Sbjct: 344 IDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGC 403
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LG 300
P VVT +T+I L + GR+ A + M +G P+ + Y L K R++ L
Sbjct: 404 VPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALE 463
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+ +M ++ P TY +L+ + G + + +M E GC PD + YN L+
Sbjct: 464 MLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFC 523
Query: 361 DKGMLDMARKYDEEMFAKGLSA 382
G D A ++M + SA
Sbjct: 524 KAGNTDAACGVFDDMSSSRCSA 545
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 155/357 (43%), Gaps = 46/357 (12%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P AT+ + + EA+ K+ + G D V+Y +L+D L + K EA +L
Sbjct: 19 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 78
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
K + GL T Y ++R + + ++ M G V D+ + S
Sbjct: 79 ----FKEMALRGLAL--DTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTM 132
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D + K+G+ AV+++K M+ +G+ + V Y+ +I + + +D A+ + +M++ C
Sbjct: 133 IDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 192
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR------------- 290
P +T N +I LC++G V A A EM + GC PDV TY+
Sbjct: 193 TPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASH 252
Query: 291 ----------CL----------------EKPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
C +K E + L +++ +G P + TY LL
Sbjct: 253 SLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGL 312
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ G L + +K+ + GC+PD Y +L+D L + A K +EM +GL+
Sbjct: 313 CKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLA 369
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 103/219 (47%), Gaps = 3/219 (1%)
Query: 164 FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
E++ G + +Y+ ++ +CK G+ +A+ L +++ G DVV Y ++I +G
Sbjct: 8 LMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLG 67
Query: 224 VSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVI 283
+ A ++++EM G V +I+ L + G++ +A +V M GCVPDV+
Sbjct: 68 KEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVV 127
Query: 284 TYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
T L K I + +F M G+ P Y L+ + + + +M
Sbjct: 128 TLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 187
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++ C+PD YN L+D L G ++ AR + +EM G
Sbjct: 188 KKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAG 226
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 127/302 (42%), Gaps = 43/302 (14%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +++D L K + + + L+ ++ N + P AT+ + + EA+ K
Sbjct: 269 TYTAIVDWLAKNKKIEEAVALMEKITANGCT-PTIATYNALLNGLCKMGRLEEAIDLLRK 327
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + G D V+Y +L+D L + K EA +L K + GL T Y ++R
Sbjct: 328 IVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL----FKEMALRGLAL--DTVCYTALIRE 381
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI--- 208
+ + ++ M G V D+ + S +D + K+G+ AV+++K M+ +G+
Sbjct: 382 LLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPN 441
Query: 209 ---------------KMD-----------------VVAYNTVIRAVGVSEGVDFAMRVYR 236
KMD + YN +I + S V+ A +
Sbjct: 442 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFD 501
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR 296
EM E GC+P V T N +I C+ G A V +M C +V+TY L K R
Sbjct: 502 EMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRR 561
Query: 297 EI 298
++
Sbjct: 562 QL 563
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
++ A+ + ++ GC P++ T N ++ LC+ GR+ EA +L ++ GC PDV+TY
Sbjct: 2 IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61
Query: 288 FFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
L K + E LF M G+ Y L+R+ + G + V+K M G
Sbjct: 62 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
C PD + ++D L G + A + + M A+GL+ P E + + L+ G
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLA--PNEVVYSALIHG 170
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 104/246 (42%), Gaps = 8/246 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY S+ID LGK ++ L M ++ + + + + + + +A +
Sbjct: 339 TYTSLIDGLGKEKRSFEAYKLFKEMALRGLAL-DTVCYTALIRELLQTGKIPQASSVYKT 397
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G + D V+ ++D L + + A + K++ GL +Y+ ++ G
Sbjct: 398 MTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRI----FKSMEARGLAP--NEVVYSALIHG 451
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K E +M K D +Y+I +D +CKSG A + EM + G K D
Sbjct: 452 LCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPD 511
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V YN +I + D A V+ +M C +VVT +I LC+ ++ +A
Sbjct: 512 VYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQ 571
Query: 272 EMPKKG 277
M ++G
Sbjct: 572 HMKERG 577
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYV 318
++ EA A++ ++ GC P + TY+ L K E + L +++++G P + TY
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
L+ G+ + ++K+M G + D Y AL+ L+ G + A + M +
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 379 G 379
G
Sbjct: 121 G 121
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%)
Query: 294 KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
K E + L +++ +G P + TY LL + G L + +K+ + GC+PD Y
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGLS 381
+L+D L + A K +EM +GL+
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLA 88
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 155/365 (42%), Gaps = 38/365 (10%)
Query: 25 CHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVN 84
CH TH T F F + N++ R PN T + K +
Sbjct: 107 CHLTHIT-------------FAFSVFANILKR-----GYHPNAITLNTLIKGLCFCGEIK 148
Query: 85 EAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVG-----FSGLVE 138
A+ +K+ G + D+VSY L++ LC+ GE K V G
Sbjct: 149 RALHFHDKVVAQGFQLDQVSYGTLINGLCKA-----------GETKAVARLLRKLEGHSV 197
Query: 139 MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK 198
+Y I+ K G + + EM +G+ ++ +Y+ + C G +A
Sbjct: 198 KPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFS 257
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
L EMK K I DV +N +I A+ +D AM ++ EM+ P++VT ++I LC
Sbjct: 258 LLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLC 317
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMD 315
+N + A A+ +M ++G P+V +Y L K + F ++ G +
Sbjct: 318 KNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVR 377
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
TY +++ + G V + KME GC P+ + ++ AL++K D A K+ EM
Sbjct: 378 TYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREM 437
Query: 376 FAKGL 380
A+GL
Sbjct: 438 IARGL 442
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 118/258 (45%), Gaps = 7/258 (2%)
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
T ++N IL K + +++ + G+ DL + SI ++ C A ++
Sbjct: 61 TFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFA 120
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
+ K+G + + NT+I+ + + A+ + ++ G Q V+ T+I LC+ G
Sbjct: 121 NILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAG 180
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG----LFDRMIESGIRPKMDTY 317
+ +L ++ PD++ Y CL K ++LG L+ MI GI P + TY
Sbjct: 181 ETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCK-NKLLGDACDLYSEMIVKGISPNVFTY 239
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
L+ F G L+ F + +M+ +PD + +N L+DAL +G +D A EEM
Sbjct: 240 TTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKH 299
Query: 378 KGLSAKPREELGTKLVQG 395
K + P T L+ G
Sbjct: 300 KNMF--PNIVTYTSLIDG 315
>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
Length = 472
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 161/375 (42%), Gaps = 54/375 (14%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P T+ I+ AH A+ F +L GL+ D + +L+ CE K EA ++
Sbjct: 75 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 134
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVV--KDLHSYS 181
+G + YN++L+ G+ M + G V D+ +Y+
Sbjct: 135 LLHRTPELGC-----VPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYN 189
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF----------- 230
+D K G KA L+KEM ++GI D+V YN+V+ A+ + +D
Sbjct: 190 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK 249
Query: 231 ------------------------AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
A+RV++EMR P VVT + ++ LC+ G+++EA
Sbjct: 250 RVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 309
Query: 267 YAVLAEMPKKGCVPDVITYHCFFR------CLEKPREILGLFDRMIESGIRPKMDTYVML 320
V M KG PDV +Y+ CL ++ LFD M+ GI P T+ +
Sbjct: 310 RDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLV---DMTDLFDLMLGDGIAPDFYTFNVQ 366
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
++ + G L +++ +M + G PD Y ++ AL G +D A + +M +G+
Sbjct: 367 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 426
Query: 381 SAKPREELGTKLVQG 395
+ P + L+QG
Sbjct: 427 A--PDKYAYNCLIQG 439
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 111/235 (47%), Gaps = 18/235 (7%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNSV+ L K D + + +M N +PN+ T+ + Y + EA+ F +
Sbjct: 222 TYNSVVHALCKARAMDKAEAFLRQMV-NKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKE 280
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL-----CFGENKNVGFSGLVEMNKTKIYN 146
+ L D V+ L+ +LC+Y + EA+++ G+N +V FS YN
Sbjct: 281 MRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDV-FS----------YN 329
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++L G+ + ++ M G+ D +++++ + G KA+ ++ EM+
Sbjct: 330 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDH 389
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
G+K DVV Y TVI A+ +D AM + +M + G P N +I+ C +G
Sbjct: 390 GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHG 444
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 188/417 (45%), Gaps = 42/417 (10%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
AL F ++ D TYN +ID+L + + D ++ L M+ PN T IM
Sbjct: 362 ALRVFEEMKKDA--APNLSTYNILIDMLCRAGKLDCAFELRDSMQ-KAGLFPNVRTVNIM 418
Query: 74 FKRYVTAHLVNEAMGTFNKLD-EFGLKDEVSYCNLVDALCEYKHVIEAQEL--------C 124
R + ++EA F ++D + DE+++C+L+D L + V +A ++ C
Sbjct: 419 VDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDC 478
Query: 125 FGENKNVGFSGLVEM--------NKTKIY---------------NMILRGWFKMSWWGKC 161
++ ++ L++ + KIY N + FK K
Sbjct: 479 --RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKG 536
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
R +EE+ R V D SYSI + + K+G + +L+ MK++G +D AYN VI
Sbjct: 537 RAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDG 596
Query: 222 VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
V+ A ++ EM+ G +P+VVT +VI L + R+ EAY + E K +
Sbjct: 597 FCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELN 656
Query: 282 VITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWK 338
V+ Y F + + E + + +++ G+ P + T+ LL + + V ++
Sbjct: 657 VVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQ 716
Query: 339 KMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
M+EL C+P++ Y L++ L + A + +EM +G+ KP T ++ G
Sbjct: 717 SMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGM--KPSTISYTTMISG 771
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 160/370 (43%), Gaps = 12/370 (3%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D RA+E+F W E H ++YNS++ ++ + FD ++ M P+ T
Sbjct: 77 DVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFG-PSVNT 135
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGEN 128
M V A+ + E + +F + S Y L+ A H L F +
Sbjct: 136 CIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTL-FQQM 194
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
+ +G+ V + + ++RG+ K +EM + D+ Y++ +D
Sbjct: 195 QELGYEPTVHL-----FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFG 249
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
K GK A K + E++ G+K D V Y ++I + + +D A+ ++ + + P
Sbjct: 250 KVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY 309
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE---KPREILGLFDRM 305
NT+I G+ EAY++L KG +P VI Y+C CL K E L +F+ M
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM 369
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
+ P + TY +L+ R G L F + M++ G P+ N +VD L L
Sbjct: 370 KKDAA-PNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 366 DMARKYDEEM 375
D A E+M
Sbjct: 429 DEACAIFEQM 438
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 127/264 (48%), Gaps = 5/264 (1%)
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
+ Y++++ G K + + E + M ++G V D +Y+I +D CK GK KA +L +
Sbjct: 552 ARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLE 611
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
EMK KG + VV Y +VI + + +D A ++ E + + +VV +++I + G
Sbjct: 612 EMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVG 671
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYV 318
R+ EAY +L E+ +KG P+V T++ L K EI L F M E P TY
Sbjct: 672 RIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYG 731
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+L+ + FV W++M++ G P +Y ++ L G + A + A
Sbjct: 732 ILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKAN 791
Query: 379 GLSAKPREELGTKLVQGGLDGEQS 402
G P +++G +G ++
Sbjct: 792 G--GVPDSACYNAMIEGLSNGNRA 813
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 162/378 (42%), Gaps = 46/378 (12%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C AN A+E F +E + T YN++I G +FD +++L+ R + SIP
Sbjct: 284 CKANRLDEAVEMFEHLEKN-RRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK-GSIP 341
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCF 125
+ + + V+EA+ F ++ + + +Y L+D LC + A EL
Sbjct: 342 SVIAYNCILTCLRKMGKVDEALRVFEEMKKDAAPNLSTYNILIDMLCRAGKLDCAFEL-- 399
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
+ M K G+ ++ + +I +D
Sbjct: 400 ---------------------------------------RDSMQKAGLFPNVRTVNIMVD 420
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
+CKS K +A ++++M K D + + ++I +G VD A ++Y +M + C+
Sbjct: 421 RLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRT 480
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLF 302
+ + ++IK +GR + + + +M + C PD+ + + C+ K P + +F
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMF 540
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
+ + P +Y +L+ + GF + ++ M+E GC D AYN ++D
Sbjct: 541 EEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC 600
Query: 363 GMLDMARKYDEEMFAKGL 380
G ++ A + EEM KG
Sbjct: 601 GKVNKAYQLLEEMKTKGF 618
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 145/322 (45%), Gaps = 11/322 (3%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F +Y+ +I L K + ++ L + MK+ + A + I+ + VN+A
Sbjct: 548 FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRA-YNIVIDGFCKCGKVNKA 606
Query: 87 MGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
++ G + V +Y +++D L + + EA L F E K S +E+N IY
Sbjct: 607 YQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYML-FEEAK----SKRIELNVV-IY 660
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
+ ++ G+ K+ + EE+ ++G+ ++++++ +D + K+ + +A+ ++ MK+
Sbjct: 661 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKE 720
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+ V Y +I + + A ++EM++ G +PS ++ T+I L + G + E
Sbjct: 721 LKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAE 780
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLE---KPREILGLFDRMIESGIRPKMDTYVMLLR 322
A A+ G VPD Y+ L + + LF+ G+ T V+LL
Sbjct: 781 AGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLD 840
Query: 323 KFGRWGFLRPVFVVWKKMEELG 344
+ L +V + E G
Sbjct: 841 TLHKNDCLEQAAIVGAVLRETG 862
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 80/183 (43%), Gaps = 5/183 (2%)
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
+YN+++ + D ++ EM G PSV TC ++ + ++RE + V+ M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNM 159
Query: 274 PKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
K P Y F + +L LF +M E G P + + L+R F + G +
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGT 390
+ +M+ D YN +D+ G +DMA K+ E+ A GL KP E T
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGL--KPDEVTYT 277
Query: 391 KLV 393
++
Sbjct: 278 SMI 280
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 100/231 (43%), Gaps = 11/231 (4%)
Query: 159 GKCREF------WEEMDKRGVVKDLHSYSIYMDIMC-KSGKPWKAVKLYKEMKKKGIKMD 211
+CR F EM G +++ I M + C K+ K + + + M+K +
Sbjct: 109 ARCRNFDALDQILGEMSVAGFGPSVNT-CIEMVLSCVKANKLREGFDVVQNMRKFKFRPA 167
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
AY T+I A D + ++++M+E+G +P+V T+I+ + GRV A ++L
Sbjct: 168 FSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLD 227
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM D++ Y+ K ++ F + +G++P TY ++ +
Sbjct: 228 EMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKAN 287
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L +++ +E+ P +AYN ++ G D A E AKG
Sbjct: 288 RLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 163/344 (47%), Gaps = 12/344 (3%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
++T+N+++ +L K F+ +W + + K N + +F IM K +++
Sbjct: 117 SNTFNNLLILLIKSNFFEKAWRVFNETKGNVK--LDVYSFGIMIKGCCEVGYLDKGFEVL 174
Query: 91 NKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+++E GL + V Y L+D C+ + ++L + +G +V T Y +++
Sbjct: 175 GQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFY----KMGELDVVANQYT--YTVLI 228
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G+FKM E +E+M G+V ++++Y+ + C GK A +L+ EM+++G+
Sbjct: 229 NGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVA 288
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
+VV YNT+I + V A R+ M+ G P++++ NT+I C G + +A ++
Sbjct: 289 CNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSL 348
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREILGLFD---RMIESGIRPKMDTYVMLLRKFGR 326
+M G P + TY+ + + G+ D M G+ P TY +L+ R
Sbjct: 349 FNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVR 408
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
+ F ++ ME+ G D + Y L+ L G + A K
Sbjct: 409 SDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASK 452
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 134/290 (46%), Gaps = 33/290 (11%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+PN T+ M R +N A F+++ E G+ + V+Y L+ LC+ + V+EA+
Sbjct: 253 VPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAER 312
Query: 123 LCF-----GENKNV--------GFSGLVEMNKTK----------------IYNMILRGWF 153
L G + N+ G+ + ++K YN+++ G+
Sbjct: 313 LMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFS 372
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
+ + EM+ RG+ +Y+I MD + +S KA ++Y M+K G+ D+
Sbjct: 373 EAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIY 432
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
Y +I + V + A ++++ + EM +P+ V NT+I C+ G A +L EM
Sbjct: 433 IYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEM 492
Query: 274 PKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVML 320
+ G VP+V +Y+ L EK E L MIE G++P + + M+
Sbjct: 493 GENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 542
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 111/229 (48%), Gaps = 8/229 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+YN++ID D + +L ++MK + S P+ AT+ I+ + A +
Sbjct: 328 SYNTLIDGYCSIGNLDKASSLFNQMKSSGQS-PSLATYNILIAGFSEAKNSAGVTDMVRE 386
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
++ GL +V+Y L+DAL ++ +A ++ K +GLV IY +++ G
Sbjct: 387 MEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEK----AGLVA--DIYIYGVLIHG 440
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + + ++ +D+ + + Y+ + CK G ++A++L KEM + G+ +
Sbjct: 441 LCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPN 500
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
V +YN+ I + E A + ++M E+G +PS+ N + K +N
Sbjct: 501 VASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKARFDN 549
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 109/218 (50%), Gaps = 5/218 (2%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M RG D+ SYS ++ C G+ K +KL +EM+ KG+K ++ YN++I + S
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
VD A RV REM G P V T+I C+ G ++ AY + EM K+ VPD I Y
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 288 FF----RCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
RC K E +F++M G+ P TY L+ + + G + F + +M +
Sbjct: 121 VICGLCRC-GKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQS 179
Query: 344 GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G +P+ Y AL D L G +D A + EM KGL
Sbjct: 180 GLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQ 217
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 170/356 (47%), Gaps = 11/356 (3%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T Y ++ID K ++ L M + +P+ + + + EA F
Sbjct: 80 TVVYTTLIDGFCKLGNIQAAYKLFDEM-EKQRIVPDFIAYTAVICGLCRCGKMMEADKVF 138
Query: 91 NKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
NK+ G++ DEV+Y L+D C+ + +A F + + SGL Y +
Sbjct: 139 NKMFSRGVEPDEVTYTTLIDGYCKSGEMEKA----FSLHNQMVQSGLTP--NVVTYTALA 192
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G K+ E EM +G+ ++ +Y+ ++ +CKSG +AVKL +EM+ G+
Sbjct: 193 DGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMY 252
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
D + + T++ A + + A + REM + G QP+V+T N ++ C +G + + +
Sbjct: 253 PDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERL 312
Query: 270 LAEMPKKGCVPDVITYHCFFR--CLEKP-REILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
LA M +KG +P+ TY+ + C+ R ++ M G+ P +TY +L++ +
Sbjct: 313 LAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCK 372
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
++ + + K+M E G + +YN+++ K + AR+ EEM +G++A
Sbjct: 373 ARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAA 428
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 153/320 (47%), Gaps = 10/320 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
P+ ++ + Y + + + ++ GLK + +Y +++ LC+ V +A+ +
Sbjct: 8 PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
E N G + T +Y ++ G+ K+ + ++EM+K+ +V D +Y+
Sbjct: 68 -LREMINQGI-----VPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAV 121
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ +C+ GK +A K++ +M +G++ D V Y T+I S ++ A ++ +M + G
Sbjct: 122 ICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGL 181
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILG 300
P+VVT + LC+ G+V A +L EM KG ++ TY+ L K R+ +
Sbjct: 182 TPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVK 241
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L + M +G+ P T+ L+ + + G + + ++M + G P +N L++
Sbjct: 242 LMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFC 301
Query: 361 DKGMLDMARKYDEEMFAKGL 380
GML+ + M KG+
Sbjct: 302 MSGMLEDGERLLAWMLEKGI 321
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 123/284 (43%), Gaps = 9/284 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + + ++A N + T TY ++ D L K + D + L+H M +
Sbjct: 161 CKSGEMEKAFSLHNQM-VQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQL- 218
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELC 124
N T+ + + + +A+ +++ G+ D +++ L+DA C+ +++A EL
Sbjct: 219 NICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHEL- 277
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
E + G V +N+++ G+ M ++G++ + +Y+ M
Sbjct: 278 LREMLDRGLQPTV-----ITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLM 332
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
C ++YK M +G+ D YN +I+ + + A +++EM E G
Sbjct: 333 KQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFN 392
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
+ + N++IK + ++ EA + EM ++G D Y+ F
Sbjct: 393 LTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLF 436
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 167/362 (46%), Gaps = 34/362 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWN----LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
TYN V+ + K + W L+ MK++ + + T+ + L EA
Sbjct: 222 TYNVVLHVYSKM---SVPWKEVVVLVDSMKEDGIELDRY-TYNTLISCCRRRGLYREAAQ 277
Query: 89 TFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
F+++ G + D+V++ +L+D + + E G K + +G T YN
Sbjct: 278 MFDEMKAAGFEPDKVTFNSLLDVYGKARR----HEEAIGVLKKMENAGCTPSVVT--YNS 331
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++ + K + E +EM+ RG+ D+ +Y+ + + + GK A+ Y EM + G
Sbjct: 332 LISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNG 391
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
++ YN +I+ GV M V+ ++R G P VVT NT++ + +NG E
Sbjct: 392 CSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVS 451
Query: 268 AVLAEMPKKGCVPDVITY----HCFFRCLEKPREILGLFD-------RMIESGIRPKMDT 316
V EM K G +P+ TY + RC GLFD RMIE+GI P + T
Sbjct: 452 GVFKEMKKAGYIPERDTYVSLISSYSRC--------GLFDQAMEIYKRMIEAGIYPDIST 503
Query: 317 YVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
Y +L R G ++ +ME+ C PDE +Y++L+ A + LD + E+++
Sbjct: 504 YNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIY 563
Query: 377 AK 378
A+
Sbjct: 564 AQ 565
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 91/189 (48%), Gaps = 4/189 (2%)
Query: 172 GVVKDLHSYSIYMDIMCKSGKPWK-AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF 230
GV L +Y++ + + K PWK V L MK+ GI++D YNT+I
Sbjct: 215 GVQPALVTYNVVLHVYSKMSVPWKEVVVLVDSMKEDGIELDRYTYNTLISCCRRRGLYRE 274
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR 290
A +++ EM+ G +P VT N+++ + + R EA VL +M GC P V+TY+
Sbjct: 275 AAQMFDEMKAAGFEPDKVTFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLIS 334
Query: 291 CLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
K E L L M G++P + TY L+ R G + + +M GCSP
Sbjct: 335 AYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSP 394
Query: 348 DEFAYNALV 356
+ YNAL+
Sbjct: 395 NLCTYNALI 403
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/401 (19%), Positives = 161/401 (40%), Gaps = 46/401 (11%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY ++I L + + D + M N S PN T+ + K + E M F+
Sbjct: 363 TYTTLISGLDRIGKIDAALATYSEMVRNGCS-PNLCTYNALIKMHGVRGKFTEMMIVFDD 421
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
L G +V N + A+ + F E K G+ + + Y ++ +
Sbjct: 422 LRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGY-----IPERDTYVSLISSY 476
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
+ + + E ++ M + G+ D+ +Y+ + + + G+ +A KL+ EM+ + K D
Sbjct: 477 SRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDE 536
Query: 213 VAYNTVIRAVGVSEGVD---------FAMRV--------------------------YRE 237
++Y++++ A ++ +D +A R+ ++E
Sbjct: 537 LSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQE 596
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEK 294
+R C + N ++ + +N V++ VL M + TY+ + L
Sbjct: 597 LRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGD 656
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
+ + + SG+RP +Y ++ +GR G ++ ++ +M+ G PD YN
Sbjct: 657 CEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNI 716
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+ + + M + A + A+G KP E +++G
Sbjct: 717 FIKSYVANLMFEEAIDLVRYLVAQG--CKPNERTYNSILEG 755
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 4/210 (1%)
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG-VSEGVDFAMRV 234
D +Y+ + ++G+ AV +++ M G++ +V YN V+ +S + +
Sbjct: 184 DASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVVL 243
Query: 235 YREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
M+E G + T NT+I G REA + EM G PD +T++ K
Sbjct: 244 VDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGK 303
Query: 295 PR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFA 351
R E +G+ +M +G P + TY L+ + + G L + ++ME G PD
Sbjct: 304 ARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVT 363
Query: 352 YNALVDALIDKGMLDMARKYDEEMFAKGLS 381
Y L+ L G +D A EM G S
Sbjct: 364 YTTLISGLDRIGKIDAALATYSEMVRNGCS 393
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 72/131 (54%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ + ++ KC E+ G+ D +SY+ + + G+ +A +L+ EMK
Sbjct: 644 YNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMK 703
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
G+K D+V YN I++ + + A+ + R + GC+P+ T N++++ C +GR+
Sbjct: 704 CSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRHGRMV 763
Query: 265 EAYAVLAEMPK 275
EA + L+ +PK
Sbjct: 764 EAKSFLSNLPK 774
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 153/391 (39%), Gaps = 72/391 (18%)
Query: 33 TYNSVID---ILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
TYN++I + GKF E + ++ + + +P+ T+ + + L +E G
Sbjct: 398 TYNALIKMHGVRGKFTEMMIVFDDLR----SAGYVPDVVTWNTLLAVFGQNGLDSEVSGV 453
Query: 90 FNKLDEFG----------LKDEVSYCNLVDALCE-YKHVIEAQELCFGENKNVGFSGLVE 138
F ++ + G L S C L D E YK +IEA G+
Sbjct: 454 FKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEA--------------GIYP 499
Query: 139 MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD-------LHSYS---------- 181
T YN +L + W + + + EM+ R D LH+Y+
Sbjct: 500 DIST--YNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKA 557
Query: 182 IYMDIMCKSGKP--W----------------KAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
+ DI + +P W + K ++E++++ +D+ N ++ G
Sbjct: 558 LSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYG 617
Query: 224 VSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVI 283
++ V V M+E S T N+++ + G + A+L E+ G PD
Sbjct: 618 KNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRY 677
Query: 284 TYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
+Y+ + +E LF M SG++P + TY + ++ + + + +
Sbjct: 678 SYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYL 737
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMARKY 371
GC P+E YN++++ G + A+ +
Sbjct: 738 VAQGCKPNERTYNSILEGYCRHGRMVEAKSF 768
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 134/301 (44%), Gaps = 11/301 (3%)
Query: 32 DTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
DTY S+I + FD + + RM + P+ +T+ + +A F
Sbjct: 467 DTYVSLISSYSRCGLFDQAMEIYKRMIE-AGIYPDISTYNAVLSALARGGRWVQAEKLFA 525
Query: 92 KLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
++++ K DE+SY +L+ A K + + + L ++++ ++ +E + + ++L
Sbjct: 526 EMEDRDCKPDELSYSSLLHAYANAKKLDKMKAL----SEDI-YAQRIEPHNWLVKTLVLV 580
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
K++ + + ++E+ +R D++ + + I K+ K ++ MK+ I
Sbjct: 581 NN-KVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINH 639
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
YN+++ + + E++ G +P + NTVI G+++EA +
Sbjct: 640 SAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLF 699
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
+EM G PD++TY+ F + E + L ++ G +P TY +L + R
Sbjct: 700 SEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRH 759
Query: 328 G 328
G
Sbjct: 760 G 760
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 70/190 (36%), Gaps = 41/190 (21%)
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---P------ 295
P ++ GR R+A AV M G P ++TY+ K P
Sbjct: 183 PDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVV 242
Query: 296 ------------------------------REILGLFDRMIESGIRPKMDTYVMLLRKFG 325
RE +FD M +G P T+ LL +G
Sbjct: 243 LVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYG 302
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
+ V KKME GC+P YN+L+ A + G+L+ A + +EM +G+ KP
Sbjct: 303 KARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGM--KPD 360
Query: 386 EELGTKLVQG 395
T L+ G
Sbjct: 361 VVTYTTLISG 370
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 154/343 (44%), Gaps = 16/343 (4%)
Query: 50 SWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLV 108
+ I M P+ TF ++ V A+ + + G ++ +Y +L+
Sbjct: 284 ALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLI 343
Query: 109 DALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFW 165
LC+ V EA ++ + ++E + T YN I+ K + + +
Sbjct: 344 SGLCKLGEVDEAVKV---------LNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLA 394
Query: 166 EEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVS 225
+ +G++ D+ +Y+ + +C S A++LYKEMK KG D YN +I ++
Sbjct: 395 LVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFR 454
Query: 226 EGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
+ A+ + +EM GC +V+T NT+I C+N R+ EA + +M +G + +TY
Sbjct: 455 GKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTY 514
Query: 286 HCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE 342
+ L E+ E L D+MI G+RP TY LL F + G ++ + + M
Sbjct: 515 NTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMAS 574
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
GC PD Y L+ L G ++ A K + KG++ P
Sbjct: 575 DGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPH 617
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 157/375 (41%), Gaps = 44/375 (11%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D + F W +F ++ + V+ LGK EFD +++ MK + S I N +
Sbjct: 68 DSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSL 127
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENK 129
+ + Y + FGL +E+ ++A E+ FG
Sbjct: 128 L-VFIESYAS----------------FGLYNEI------------LQFVDAMEVEFGVVA 158
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
N F YN +L + M RG+ D+ +++I + +C+
Sbjct: 159 NTHF-----------YNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCR 207
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
+ + A+ L +EM+ G+ D + T+++ +D AMRV +M E GC + VT
Sbjct: 208 AHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVT 267
Query: 250 CNTVIKLLCENGRVREAYAVLAEMP-KKGCVPDVITYHCFFRCLEKP---REILGLFDRM 305
N ++ C+ GR+ EA + EM ++G PD T++ L K + L + D M
Sbjct: 268 VNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMM 327
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
+ G P + TY L+ + G + V +M E CSP+ YN ++ L + +
Sbjct: 328 LREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQV 387
Query: 366 DMARKYDEEMFAKGL 380
+ A K + KG+
Sbjct: 388 EEATKLALVLTGKGI 402
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 154/344 (44%), Gaps = 29/344 (8%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS+I L K E D + ++++M + S PN T+ + + V EA
Sbjct: 338 TYNSLISGLCKLGEVDEAVKVLNQMIERDCS-PNTVTYNTIISTLCKENQVEEATKLALV 396
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK-------IY 145
L G+ +V C Y +I Q LC N V EM KTK Y
Sbjct: 397 LTGKGILPDV---------CTYNSLI--QGLCLSRNHTVAMELYKEM-KTKGCHPDEFTY 444
Query: 146 NMILRGWFKMSWWGKCRE---FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
NM++ + + GK +E +EM+ G +++ +Y+ +D CK+ + +A +++ +
Sbjct: 445 NMLIDS---LCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQ 501
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M+ +G+ + V YNT+I + SE V+ A ++ +M G +P T N+++ C+ G
Sbjct: 502 MELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGD 561
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVM 319
+++A ++ M GC PD++TY L K + L + GI Y
Sbjct: 562 IKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNP 621
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
+++ R + ++++M E +PD Y + L G
Sbjct: 622 VIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGG 665
>gi|449453031|ref|XP_004144262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g26500-like [Cucumis sativus]
Length = 505
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 177/390 (45%), Gaps = 33/390 (8%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+ + + W+ FF + ET +FTHT ++N +ID++GK DL W LI M
Sbjct: 83 QVCNTFPLSWRPVYRFFQFTETHPNFTHTAVSFNKLIDVVGKSRNIDLLWGLIQEM--GR 140
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEA 120
+ N TF + + TA + + + F+ ++ +G V+ +V+ LC K V EA
Sbjct: 141 RRLVNDKTFVVALRTLATARELKKCVEFFHLMNGYGFCYSLVTLNRVVEKLCGCKLVDEA 200
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+ L N+ + G+ Y ++++G+ + + + W M G ++ +
Sbjct: 201 KFLVMKLNEWIKADGVT-------YKLLIKGFCNVGDLIEASKMWNLMVDEGFEPEMEAV 253
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV--AYNTVIRAVGVSEGVDFAMRVYREM 238
M+++ K+ K +A+KL++ ++ + D++ Y+ VIR + V A V+ EM
Sbjct: 254 EEMMNVLFKTNKLDEALKLFQALRSDRMN-DLIPSTYSLVIRWLCNKGKVGQAFIVFDEM 312
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC---LEKP 295
+ G + +++I L GR REAY ++ + PD+ YH F + L++
Sbjct: 313 HKRGLEVDNSVHSSLIYGLLARGRRREAYNIMRRIEN----PDLDVYHAFIKGLLKLKRA 368
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
E +F MIE G P M TY+MLL+ G G K G P +
Sbjct: 369 NEATQVFREMIERGCEPIMHTYIMLLQ--GHLG----------KRGRKGSDPLVNFDSIF 416
Query: 356 VDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
V L+ G A KY E + +GL PR
Sbjct: 417 VGGLVKNGKSLEATKYVERLMKRGLEV-PR 445
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 49/261 (18%), Positives = 105/261 (40%), Gaps = 35/261 (13%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C D A + +N + D F + ++++L K + D + L ++ + +
Sbjct: 226 CNVGDLIEASKMWNLM-VDEGFEPEMEAVEEMMNVLFKTNKLDEALKLFQALRSDRMNDL 284
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
+T+ ++ + V +A F+++ + GL+ D + +L+ L EA +
Sbjct: 285 IPSTYSLVIRWLCNKGKVGQAFIVFDEMHKRGLEVDNSVHSSLIYGLLARGRRREAYNIM 344
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY---- 180
+E +Y+ ++G K+ + + + EM +RG +H+Y
Sbjct: 345 ----------RRIENPDLDVYHAFIKGLLKLKRANEATQVFREMIERGCEPIMHTYIMLL 394
Query: 181 -------------------SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
SI++ + K+GK +A K + + K+G+++ YN +
Sbjct: 395 QGHLGKRGRKGSDPLVNFDSIFVGGLVKNGKSLEATKYVERLMKRGLEVPRFDYNKFLHY 454
Query: 222 VGVSEGVDFAMRVYREMREMG 242
EGV V ++RE+G
Sbjct: 455 YSNEEGVVMFREVGNKLREVG 475
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 171/363 (47%), Gaps = 13/363 (3%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
++AL +FN + ++T+N+++ +L K F+ +W + + K N + +F
Sbjct: 112 EQALFYFNQM-IGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGNVK--LDVYSFG 168
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKN 130
IM K +++ +++E GL + V Y L+D C+ + ++L +
Sbjct: 169 IMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFY----K 224
Query: 131 VGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS 190
+G +V T Y +++ G+FKM E +E+M G+V ++++Y+ + C
Sbjct: 225 MGELDVVANQYT--YTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCND 282
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTC 250
GK A +L+ EM+++G+ +VV YNT+I + V A R+ M+ G P++++
Sbjct: 283 GKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISY 342
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFD---RMIE 307
NT+I C G + +A ++ +M G P + TY+ + + G+ D M
Sbjct: 343 NTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEA 402
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
G+ P TY +L+ R + F ++ ME+ G D + Y L+ L G +
Sbjct: 403 RGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKE 462
Query: 368 ARK 370
A K
Sbjct: 463 ASK 465
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 135/290 (46%), Gaps = 33/290 (11%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+PN T+ M R +N A F+++ E G+ + V+Y L+ LC+ + V+EA+
Sbjct: 266 VPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAER 325
Query: 123 LCF-----GENKNV--------GFSGLVEMNKTK----------------IYNMILRGWF 153
L G + N+ G+ + ++K YN+++ G+
Sbjct: 326 LMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFS 385
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
+ + EM+ RG+ +Y+I MD + +S KA ++Y M+K G+ D+
Sbjct: 386 EAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIY 445
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
Y +I + V + A ++++ + EM +P+ V NT+I C+ G A +L EM
Sbjct: 446 IYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEM 505
Query: 274 PKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVML 320
+ G VP+V +Y+ + L EK E L MIE G++P + + M+
Sbjct: 506 GENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 555
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 112/229 (48%), Gaps = 8/229 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+YN++ID D + +L ++MK + S P+ AT+ I+ + A +
Sbjct: 341 SYNTLIDGYCSIGNLDKASSLFNQMKSSGQS-PSLATYNILIAGFSEAKNSAGVTDMVRE 399
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
++ GL +V+Y L+DAL ++ +A ++ K +GLV IY +++ G
Sbjct: 400 MEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEK----AGLVA--DIYIYGVLIHG 453
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + + ++ +D+ + + Y+ + CK G ++A++L KEM + G+ +
Sbjct: 454 LCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPN 513
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
V +YN+ I+ + E A + ++M E+G +PS+ N + K +N
Sbjct: 514 VASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKARFDN 562
>gi|357159149|ref|XP_003578355.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Brachypodium distachyon]
Length = 857
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 149/328 (45%), Gaps = 42/328 (12%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
+D AL FF+W++ F H TY ++I ILG+ +F + NL+H M + P
Sbjct: 342 HDHTMALGFFHWLKRQPGFKHDGHTYTTMIGILGQARQFGIMRNLLHEMNRD-RCKPTVV 400
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE 127
T+ + Y A+ + EA+ F +++E G + D V+YC L+D + ++ A +L +G
Sbjct: 401 TYNRIIHAYGRANYLREAVKVFEEMEEAGYEPDRVTYCTLIDIHAKAGYLEVAMDL-YGR 459
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
+ VG S T Y+ ++ K + + EM + G +L +Y+I + +
Sbjct: 460 MQEVGLS-----PDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIIIALQ 514
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR-------- 239
K+ VKLY++M+ G + D + Y+ V+ +G +D A V+ EMR
Sbjct: 515 AKARNYDNVVKLYRDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRRDWAPDEP 574
Query: 240 --------------------------EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
+ G QP+V TCN+++ + R ++AY+VL M
Sbjct: 575 VYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNM 634
Query: 274 PKKGCVPDVITYHCFFRCLEKPREILGL 301
+G VP + TY C +GL
Sbjct: 635 LAQGLVPSLQTYTLLLSCCTDAHAQMGL 662
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 120/278 (43%), Gaps = 26/278 (9%)
Query: 118 IEAQELCFGENKNVGFSGLVEMNKTK------IYNMILRGWFKMSWWGKCREFWEEMDKR 171
I Q FG +N+ L EMN+ + YN I+ + + ++ + + +EEM++
Sbjct: 373 ILGQARQFGIMRNL----LHEMNRDRCKPTVVTYNRIIHAYGRANYLREAVKVFEEMEEA 428
Query: 172 GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFA 231
G D +Y +DI K+G A+ LY M++ G+ D Y+ ++ +G + A
Sbjct: 429 GYEPDRVTYCTLIDIHAKAGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAA 488
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC 291
+++ EM E GC P++VT N +I L + + +M G PD ITY
Sbjct: 489 YKLFCEMIENGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQVAGFRPDKITYSIVM-- 546
Query: 292 LEKPREILGLFDRMIESGI---------RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE 342
E+LG + E+ P Y +L+ +G+ G + + M +
Sbjct: 547 -----EVLGHCGHLDEAEAVFIEMRRDWAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQ 601
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G P+ N+L+ A + A + M A+GL
Sbjct: 602 DGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGL 639
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 5/147 (3%)
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
+ + C+ N V+KLL ++ + L P G D TY L + R+
Sbjct: 322 LDSLHCKIDAFQANQVLKLLHDHTMALGFFHWLKRQP--GFKHDGHTYTTMIGILGQARQ 379
Query: 298 ---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
+ L M +P + TY ++ +GR +LR V+++MEE G PD Y
Sbjct: 380 FGIMRNLLHEMNRDRCKPTVVTYNRIIHAYGRANYLREAVKVFEEMEEAGYEPDRVTYCT 439
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLS 381
L+D G L++A M GLS
Sbjct: 440 LIDIHAKAGYLEVAMDLYGRMQEVGLS 466
>gi|302809819|ref|XP_002986602.1| hypothetical protein SELMODRAFT_124189 [Selaginella moellendorffii]
gi|300145785|gb|EFJ12459.1| hypothetical protein SELMODRAFT_124189 [Selaginella moellendorffii]
Length = 445
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 171/378 (45%), Gaps = 24/378 (6%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKD---NPSSIPNHATFRIMFKRYVTAHLV 83
F H+ TY +++ EFD + L+ KD +P S+ +M K + A V
Sbjct: 10 FVHSEFTYGTLVHGHCLAGEFDEAKRLVEEFKDTGMSPGSLV--VLHNLMLKGFSEAGFV 67
Query: 84 NEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK 143
+EA +++D + VSY L+DALC + EA+E E + + G+ T
Sbjct: 68 DEAKSHLHRMD--CKPNSVSYNTLIDALCSSGRIQEARE----ELQAMAKRGVAPNRVT- 120
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
YN + G K + E M+ G +++ ++ +CKSG+P +A K+ + M
Sbjct: 121 -YNAMATGLGKAGLLDEAFELMGVMESAGFALTAVTFNPVVEFLCKSGRPDEACKVMETM 179
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
+ I+ +++ N ++ A + + A+ + M EMG P++VT N +++L C ++
Sbjct: 180 LLRNIEPNILTLNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQM 239
Query: 264 REAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKM---DTY 317
A +L M C P+ +TY F + + E ++++ G P + + Y
Sbjct: 240 DSAAKLLETMAHSKCKPNFVTYSIMVQKFAEMGRMVEARAFLEQLVVCGYAPNLLVCNAY 299
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
V L K G V M E GC + YN+LV+ G +D A + EEM A
Sbjct: 300 VAGLCKTGEMDLASRFLTV---MAEEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIA 356
Query: 378 KGLSAKPREELGTKLVQG 395
+G + P + L+QG
Sbjct: 357 EG--SLPDSTTYSVLIQG 372
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 136/346 (39%), Gaps = 63/346 (18%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A A E +E+ F T T+N V++ L K D + ++ M PN
Sbjct: 131 AGLLDEAFELMGVMES-AGFALTAVTFNPVVEFLCKSGRPDEACKVMETMLLRNIE-PNI 188
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFG 126
T ++ + A EA+G + + E G V++ L++ C + A +L
Sbjct: 189 LTLNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAKL--- 245
Query: 127 ENKNVGFSGLVEMNKTK------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
L M +K Y+++++ + +M + R F E++ G +L
Sbjct: 246 ---------LETMAHSKCKPNFVTYSIMVQKFAEMGRMVEARAFLEQLVVCGYAPNLLVC 296
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ Y+ +CK+G+ +D A R M E
Sbjct: 297 NAYVAGLCKTGE-----------------------------------MDLASRFLTVMAE 321
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG 300
GC+ + T N++++ C+ GR+ EA VL EM +G +PD TY + L +I
Sbjct: 322 EGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDSTTYSVLIQGLCSAGQIEH 381
Query: 301 LF------DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
F R +ES RP T+V L+ K G + +V ++M
Sbjct: 382 AFMVMLQVTRAVESA-RPDPATFVKLIEKLCELGEMDRAALVLERM 426
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 177/388 (45%), Gaps = 44/388 (11%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+S+I L + + + LI +M+++ + P T+ + + H + A F
Sbjct: 499 TYSSLIYGLIQDQKLHKAMALITKMQEDGIT-PGVITYTTLIQGQCKKHEFDNAFRLFEM 557
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+++ GL DE +Y L DALC+ EA F K V + + Y ++ G
Sbjct: 558 MEQNGLTPDEQAYNVLTDALCKSGRAEEAYS--FLVKKGVVLTKVT-------YTSLVDG 608
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K E+M G D H+YS+ + +CK K +A+ + +M +G+K +
Sbjct: 609 FSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGN 668
Query: 212 VVAYNTVIRAVGVSEGV-DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
+VAY +I + + EG D A ++ EM G +PS +T I C+ GR+ EA ++
Sbjct: 669 IVAYTIIISEM-IKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLI 727
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPREILGLFD-------RMIESGIRPKMDTYVMLLRK 323
EM + G PDV+TY+ F +G D RMI++ P TY +LL+
Sbjct: 728 GEMERNGVAPDVVTYNVFINGCGH----MGYMDCAFSTLKRMIDASCEPNYWTYWLLLKH 783
Query: 324 F--------------GRWGFLRPVFVVWKKMEEL---GCSPDEFAYNALVDALIDKGMLD 366
F G W +++ + VW+ +E + G +P Y++++ L+
Sbjct: 784 FLKMSLANAHYVDTSGMWNWIK-LDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLE 842
Query: 367 MARKYDEEMFAKGLSAKPREELGTKLVQ 394
A + M K +S P EE+ T L++
Sbjct: 843 EACVLLDHMLGKDIS--PNEEIYTMLIK 868
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 6/262 (2%)
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
K YN+ LR + + + ++ + G++ D +Y+ + CK G A + ++
Sbjct: 149 KCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRL 208
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
+++ G++MD N ++ + + A + M MGC+ + + +I+ LCE
Sbjct: 209 LRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRC 268
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVM 319
VREA +L M + GC P++ TY R L K I L D M G+ P + TY
Sbjct: 269 VREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNA 328
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++ + + G L+ + ME GC+PD++ YN+L+ L G D A + A+G
Sbjct: 329 MIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCG-GKPDEAEELLNGAIARG 387
Query: 380 LSAKPREELGTKLVQGGLDGEQ 401
S P T ++ G E+
Sbjct: 388 FS--PTVITFTNIINGYCKAEK 407
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 131/345 (37%), Gaps = 78/345 (22%)
Query: 99 KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWW 158
++E SY L+ LCE + V EA L ++ L Y +++RG K
Sbjct: 251 RNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNL------HTYTLLIRGLCKEGRI 304
Query: 159 GKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG--------------------------- 191
R +EM +RGVV + +Y+ +D CKSG
Sbjct: 305 HDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSL 364
Query: 192 -------KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRV---------- 234
KP +A +L +G V+ + +I +E +D A+RV
Sbjct: 365 IHGLCGGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCK 424
Query: 235 -------------------------YREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
E+ G P+VV ++I C+ G+V A V
Sbjct: 425 LDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEV 484
Query: 270 LAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
+GC P+ TY L +K + + L +M E GI P + TY L++ +
Sbjct: 485 FKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCK 544
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
F +++ ME+ G +PDE AYN L DAL G + A +
Sbjct: 545 KHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF 589
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 166/399 (41%), Gaps = 35/399 (8%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKF---FEFD-LSWNLI------HRMKD 59
D AL FF WV F HT ++ +++ +L + +D L ++I M++
Sbjct: 69 DPATALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANYDKLVVSMISCSGTAEDMRE 128
Query: 60 NPSSIPNHATFRIMFKRYVTA----HLVNEAMGTFNKLDEFG-----------LKDEVSY 104
+I A R KR + +L ++ F+ + G L D V+Y
Sbjct: 129 AVDAI--QAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTY 186
Query: 105 CNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREF 164
++ A C+ + A F + G +EM+ T N +L G+ + K
Sbjct: 187 NTMIMAYCKEGSLAIAHRY-FRLLRESG----MEMD-TYTCNALLLGYCRTGDLRKACWL 240
Query: 165 WEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGV 224
M G ++ +SY+I + +C++ +A+ L M + G ++ Y +IR +
Sbjct: 241 LMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCK 300
Query: 225 SEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
+ A + EM G PSV T N +I C++GR+++A + M GC PD T
Sbjct: 301 EGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWT 360
Query: 285 YHCFFR--CLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE 342
Y+ C KP E L + I G P + T+ ++ + + + V M
Sbjct: 361 YNSLIHGLCGGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMIS 420
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
C D AY L+ LI K L A+ E+FA GLS
Sbjct: 421 SKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLS 459
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 129/279 (46%), Gaps = 6/279 (2%)
Query: 102 VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKC 161
+++ N+++ C+ + + +A + K++ S +++ + Y +++ K +
Sbjct: 393 ITFTNIINGYCKAEKIDDALRV-----KSIMISSKCKLD-LQAYGVLISVLIKKHRLKEA 446
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
++ E+ G+ ++ Y+ +D CK GK A++++K + +G + + Y+++I
Sbjct: 447 KDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYG 506
Query: 222 VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
+ + + AM + +M+E G P V+T T+I+ C+ A+ + M + G PD
Sbjct: 507 LIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPD 566
Query: 282 VITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKME 341
Y+ L K + +++ G+ TY L+ F + G + +KM
Sbjct: 567 EQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMV 626
Query: 342 ELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
GC D Y+ L+ AL + L+ A ++M +G+
Sbjct: 627 NEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGV 665
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 146/371 (39%), Gaps = 48/371 (12%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQEL 123
+P+ T+ M Y + A F L E G++ + CN + L Y + ++
Sbjct: 180 LPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNAL--LLGYCRTGDLRKA 237
Query: 124 CFGENKNVGFSGLVEMNKTKI-YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
C+ + L+ + + Y ++++G + + M + G +LH+Y++
Sbjct: 238 CW----LLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTL 293
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ +CK G+ A L EM ++G+ V YN +I S + A+ + M G
Sbjct: 294 LIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNG 353
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--C-LEKPREIL 299
C P T N++I LC G+ EA +L +G P VIT+ C EK + L
Sbjct: 354 CNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDAL 412
Query: 300 GLFDRMIES-----------------------------------GIRPKMDTYVMLLRKF 324
+ MI S G+ P + Y ++ +
Sbjct: 413 RVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAY 472
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
+ G + V+K E GC P+ + Y++L+ LI L A +M G++ P
Sbjct: 473 CKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGIT--P 530
Query: 385 REELGTKLVQG 395
T L+QG
Sbjct: 531 GVITYTTLIQG 541
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 106/252 (42%), Gaps = 24/252 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVN----EAMG 88
TYN I+ G D +++ + RM D S PN+ T+ ++ K ++ L N + G
Sbjct: 741 TYNVFINGCGHMGYMDCAFSTLKRMID-ASCEPNYWTYWLLLKHFLKMSLANAHYVDTSG 799
Query: 89 TFN--KLD----------EFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSG 135
+N KLD + GL V+Y +++ C+ + EA C + +G
Sbjct: 800 MWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEA---CVLLDHMLGKD- 855
Query: 136 LVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK 195
+ N+ +IY M+++ + + K F M + G L SY + +C G K
Sbjct: 856 -ISPNE-EIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDK 913
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A L+ ++ + + VA+ + + + VD ++ M C+ T + V
Sbjct: 914 AKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDSETYSMVTN 973
Query: 256 LLCENGRVREAY 267
+ E + E+Y
Sbjct: 974 NIHEASGMYESY 985
>gi|449483905|ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 636
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 175/413 (42%), Gaps = 64/413 (15%)
Query: 4 LSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWN----LIHRMKD 59
L C +N + AL FFNWV+ D ++ Y +I IL +F L+ LI KD
Sbjct: 110 LRCQSN-FVSALAFFNWVKYDLDIRLSSHNYCLIIHILAWSRQFPLAMKFLSELIELSKD 168
Query: 60 NPSSIP--------------NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYC 105
SS N F ++ K YV L++E+ +F K+ + G V C
Sbjct: 169 VSSSEDVFQNLVLCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIAC 228
Query: 106 NLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFW 165
N IL G KM +C E +
Sbjct: 229 NC----------------------------------------ILNGLAKMKSDAQCWELY 248
Query: 166 EEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVS 225
EEM + GV + ++++I ++C+ G K ++M+++G DVV YNT+I +
Sbjct: 249 EEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRR 308
Query: 226 EGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
++ A +Y+ M G P +V+ ++++ LC GRVREA+ + M +G PDV+ Y
Sbjct: 309 GRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLY 368
Query: 286 HCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE 342
+ K +E L MI GI P T +L+ +GR G L + ++++
Sbjct: 369 NTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQK 428
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
LG + Y L+ +L + A+ E + S +P ++ KL++
Sbjct: 429 LGVTVAHDIYKYLIISLCREDRPFAAKSLLERILED--SFQPDSDIYNKLIES 479
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 100/249 (40%), Gaps = 34/249 (13%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ + YV + +A + + G + D VSY +L+ LC V EA +L
Sbjct: 293 PDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQL 352
Query: 124 CF-----GENKNVGF----------SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE-- 166
G + +V G+++ ++ ++ MI G S+ CR E
Sbjct: 353 FHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSF--TCRILVEGY 410
Query: 167 --------------EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
E+ K GV Y + +C+ +P+ A L + + + + D
Sbjct: 411 GREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDS 470
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
YN +I + S V A+ + EM +P+ T ++I +CE R + ++ E
Sbjct: 471 DIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVE 530
Query: 273 MPKKGCVPD 281
M + +PD
Sbjct: 531 MVESEVIPD 539
>gi|449450197|ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 632
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 175/413 (42%), Gaps = 64/413 (15%)
Query: 4 LSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWN----LIHRMKD 59
L C +N + AL FFNWV+ D ++ Y +I IL +F L+ LI KD
Sbjct: 106 LRCQSN-FVSALAFFNWVKYDLDIRLSSHNYCLIIHILAWSRQFPLAMKFLSELIELSKD 164
Query: 60 NPSSIP--------------NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYC 105
SS N F ++ K YV L++E+ +F K+ + G V C
Sbjct: 165 VSSSEDVFQNLVLCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIAC 224
Query: 106 NLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFW 165
N IL G KM +C E +
Sbjct: 225 NC----------------------------------------ILNGLAKMKSDAQCWELY 244
Query: 166 EEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVS 225
EEM + GV + ++++I ++C+ G K ++M+++G DVV YNT+I +
Sbjct: 245 EEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRR 304
Query: 226 EGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
++ A +Y+ M G P +V+ ++++ LC GRVREA+ + M +G PDV+ Y
Sbjct: 305 GRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLY 364
Query: 286 HCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE 342
+ K +E L MI GI P T +L+ +GR G L + ++++
Sbjct: 365 NTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQK 424
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
LG + Y L+ +L + A+ E + S +P ++ KL++
Sbjct: 425 LGVTVAHDIYKYLIISLCREDRPFAAKSLLERILED--SFQPDSDIYNKLIES 475
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 100/249 (40%), Gaps = 34/249 (13%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ + YV + +A + + G + D VSY +L+ LC V EA +L
Sbjct: 289 PDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQL 348
Query: 124 CF-----GENKNVGF----------SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE-- 166
G + +V G+++ ++ ++ MI G S+ CR E
Sbjct: 349 FHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSF--TCRILVEGY 406
Query: 167 --------------EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
E+ K GV Y + +C+ +P+ A L + + + + D
Sbjct: 407 GREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDS 466
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
YN +I + S V A+ + EM +P+ T ++I +CE R + ++ E
Sbjct: 467 DIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVE 526
Query: 273 MPKKGCVPD 281
M + +PD
Sbjct: 527 MVESEVIPD 535
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 152/324 (46%), Gaps = 16/324 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALC---EYKHVIEA 120
PN T+ + VNEA+ F+++ G+ VS Y +++ LC E+KHV
Sbjct: 212 PNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATL 271
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
N+ V M I+ ++ K + + M +RGV D+ +Y
Sbjct: 272 M------NEMVDSK---IMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTY 322
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ MD C + +A K++ M +KG +V++Y+T+I + +D AM ++ EM +
Sbjct: 323 TALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQ 382
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI-- 298
P++VT NT+I LC GR+R+A A+ EM G +PD++TY L K R +
Sbjct: 383 RELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQ 442
Query: 299 -LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ + + S + P + +Y +++ R G L ++ + G PD + Y +++
Sbjct: 443 AMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMIN 502
Query: 358 ALIDKGMLDMARKYDEEMFAKGLS 381
L +G+L A K EM G S
Sbjct: 503 GLCLQGLLAEATKLFREMNTDGCS 526
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 121/251 (48%), Gaps = 5/251 (1%)
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
IL M + ++MD G+ D+++ +I ++ C + + ++ K G
Sbjct: 80 ILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLG 139
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ D + T+IR + V + A+ ++ +M G QP+ VT T+I LC+ G R A
Sbjct: 140 HQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAI 199
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKF 324
+L M +K C P+VITY+ CL K R++ L +F MI GI P + TY ++
Sbjct: 200 RLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGL 259
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
++ + V + +M + P+ + LVDAL +GM+ +A + M +G+ +P
Sbjct: 260 CKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGV--EP 317
Query: 385 REELGTKLVQG 395
T L+ G
Sbjct: 318 DVVTYTALMDG 328
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 140/340 (41%), Gaps = 24/340 (7%)
Query: 50 SWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVD 109
S+N + M+ PS + F + + + ++D G+ +V
Sbjct: 61 SFNRMLHMQPPPSVVD----FAKILTSIANMKHYSTVLSLSKQMDSLGIPSDV------- 109
Query: 110 ALCEYKHVIEAQELCFGENKNVGFSGLVEMNK------TKIYNMILRGWFKMSWWGKCRE 163
Y I C + GFS L ++ K T + ++RG G+
Sbjct: 110 ----YTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALH 165
Query: 164 FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
+++M G + +Y + +CK G A++L + M +K + +V+ YNT+I +
Sbjct: 166 LFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLF 225
Query: 224 VSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVI 283
V+ A+ ++ EM G P+V T N++I LC+ + ++ EM +P+V+
Sbjct: 226 KDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVV 285
Query: 284 TYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
+ L K + + D MI+ G+ P + TY L+ + V+ M
Sbjct: 286 IFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTM 345
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
GC+P+ +Y+ L++ +D A EEM + L
Sbjct: 346 VRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQREL 385
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 138/335 (41%), Gaps = 36/335 (10%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS+I L KF E+ L++ M D+ +PN F + +V A +
Sbjct: 251 TYNSIIHGLCKFSEWKHVATLMNEMVDS-KIMPNVVIFTTLVDALCKEGMVTIAHDVVDV 309
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCF------GENKNV-GFSGLV------- 137
+ + G++ D V+Y L+D C + EA ++ F G NV +S L+
Sbjct: 310 MIQRGVEPDVVTYTALMDGHCLRSEMDEADKV-FDTMVRKGCAPNVISYSTLINGYCKIQ 368
Query: 138 ----------EMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
EM + ++ YN ++ G + + EM G + DL +Y
Sbjct: 369 RIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYR 428
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
I +D +CK+ +A+ + K ++ + D+ +YN VI + ++ A ++ +
Sbjct: 429 ILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSK 488
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG- 300
G P V T +I LC G + EA + EM GC PD TY+ R + E L
Sbjct: 489 GLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSA 548
Query: 301 --LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
L M+ G T +++ G + V
Sbjct: 549 IQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSV 583
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 5/204 (2%)
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
+A+ + M VV + ++ ++ + + + ++M +G V T VI
Sbjct: 57 EALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVI 116
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIR 311
C RV ++VLA++ K G PD T+ R C+E K E L LFD+M+ G +
Sbjct: 117 NSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQ 176
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
P TY L+ + G R + + M + C P+ YN ++D L ++ A
Sbjct: 177 PNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNI 236
Query: 372 DEEMFAKGLSAKPREELGTKLVQG 395
EM AKG+S P ++ G
Sbjct: 237 FSEMIAKGIS--PNVSTYNSIIHG 258
>gi|298204410|emb|CBI16890.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 181/387 (46%), Gaps = 31/387 (8%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIH------------------RMK 58
FF WVE++ + H+ + ++I L K +F + NL+ R+
Sbjct: 86 FFKWVESNLNHKHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIH 145
Query: 59 DNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHV 117
D+P S ++ ++F Y + + +A+ F + G K + C L+++L + +
Sbjct: 146 DDPDSNSQILSWLVIF--YANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKAR-- 201
Query: 118 IEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
+ + K + G+V I+N+++ K K + EM+ R + DL
Sbjct: 202 --LTNMVWKVYKKMVRVGVVP--NIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDL 257
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVS-EGVDFAMRVYR 236
+Y+ + + CK G ++A+ + M++ G+ D+V YN++I ++ A+R+
Sbjct: 258 FTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREVNDLEEALRLRE 317
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR 296
M G P VVT N++++ LCE G++++A +L EM ++ PD +T + K
Sbjct: 318 VMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIG 377
Query: 297 EI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
++ + + +M+E+G++P T+ L+ F + + +M + G SP Y+
Sbjct: 378 DMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYS 437
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGL 380
LVD+ D+ + + +E+ KGL
Sbjct: 438 WLVDSYYDQDNKEAVIRLPDELSRKGL 464
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 110/237 (46%), Gaps = 6/237 (2%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+ +E M G LH+ ++ ++ + K+ K+YK+M + G+ ++ +N +I A
Sbjct: 173 QVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHAC 232
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
S V+ A ++ EM P + T NT+I L C+ G EA + M + G PD+
Sbjct: 233 CKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDI 292
Query: 283 ITYHC----FFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWK 338
+TY+ F R + E L L + M G+ P + TY +LRK G ++ +
Sbjct: 293 VTYNSLIYGFCREVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLN 352
Query: 339 KMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+M E PD N L++A G + A K ++M GL KP + L+ G
Sbjct: 353 EMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGL--KPDQFTFKALIHG 407
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 121/279 (43%), Gaps = 16/279 (5%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQEL 123
P T+ + ++ + +A N++ E ++ + CN L++A C+ + A ++
Sbjct: 326 PGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKV 385
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
K + +GL T + ++ G+ K+ +EF EM G +YS
Sbjct: 386 ----KKKMLEAGLKPDQFT--FKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWL 439
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D ++L E+ +KG+ +D+ Y +IR + + ++ A R++ M+ G
Sbjct: 440 VDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGM 499
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLF- 302
+ V ++ + G+ A +L EM K+ + + Y CF ILGLF
Sbjct: 500 KGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSILGLFW 559
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLR---PVFVVWK 338
D +IE + K +L+ + ++R P FV +K
Sbjct: 560 DHVIERRLISK-----NILKYIQQLDYMRISHPSFVHFK 593
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 149/320 (46%), Gaps = 10/320 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ ATF + + + EA+ F+K+ G + + V+Y L++ LC+ + + EA L
Sbjct: 124 PDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNL 183
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F E G S YN ++ + W EM K ++ ++ S +I
Sbjct: 184 -FSEMIAKGISP-----DIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIV 237
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D +CK GK +A + M + G++ DVV Y ++ + +D A++V+ M GC
Sbjct: 238 VDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGC 297
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILG 300
+VV+ NT+I C+ R+ +A + EM ++ +P+ +TY L + ++ +
Sbjct: 298 VCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIA 357
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
LF+ M+ G P + TY +LL + L + K +E PD YN +D +
Sbjct: 358 LFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMC 417
Query: 361 DKGMLDMARKYDEEMFAKGL 380
G L+ AR + +GL
Sbjct: 418 RAGDLEAARDLFSNLAPRGL 437
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 131/297 (44%), Gaps = 20/297 (6%)
Query: 92 KLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK------TKIY 145
K+D FG+ +V Y I C + S L ++ K T +
Sbjct: 81 KMDSFGIPPDV-----------YTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATF 129
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
++RG + G+ + +++M G ++ +Y M+ +CK + +A+ L+ EM
Sbjct: 130 TTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIA 189
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
KGI D+ YN++I A+ + EM + P+VV+ N V+ LC+ G+V E
Sbjct: 190 KGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTE 249
Query: 266 AYAVLAEMPKKGCVPDVITYHCFF--RCLEKPR-EILGLFDRMIESGIRPKMDTYVMLLR 322
A+ V+ M + G PDV+TY CL E + +FD M+ +G + +Y L+
Sbjct: 250 AHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLIN 309
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ + + ++++M P+ Y+ L+ L G L A EM A G
Sbjct: 310 GYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACG 366
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 112/235 (47%), Gaps = 3/235 (1%)
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
+L KM + ++MD G+ D+++ +I ++ C + A+ + ++ K G
Sbjct: 62 LLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLG 121
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ D + T++R + V + A+ V+ +M G QP+VVT T++ LC++ ++ EA
Sbjct: 122 HQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEAL 181
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKF 324
+ +EM KG PD+ TY+ L + + L + M++S I P + + +++
Sbjct: 182 NLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDAL 241
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ G + V M + G PD Y AL+D + +D A K + M G
Sbjct: 242 CKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNG 296
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 145/336 (43%), Gaps = 20/336 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C +WK N + + N V+D L K + + +++ M P
Sbjct: 207 CNLCEWKHVTTLLNEM-VKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVE-P 264
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEA---- 120
+ T+ + + ++EA+ F+ + G + + VSY L++ C+ + + +A
Sbjct: 265 DVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLF 324
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+E+C E + T Y+ ++ G + + EM G + +L +Y
Sbjct: 325 EEMCRQE----------LIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTY 374
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
SI +D +CK+ + +A+ L K ++ + DV YN I + + ++ A ++ +
Sbjct: 375 SILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAP 434
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPRE 297
G QP V T N +I+ LC+ G + EA + EM + GC+ + TY+ + L K
Sbjct: 435 RGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSR 494
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
+ L + M+ G + T +L++ G + V
Sbjct: 495 AIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQSV 530
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 111/241 (46%), Gaps = 8/241 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+YN++I+ K D + L M IPN T+ + + +A+ FN+
Sbjct: 303 SYNTLINGYCKIQRIDKAMYLFEEMCRQ-ELIPNTMTYSTLIHGLCHVGRLQDAIALFNE 361
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G + + V+Y L+D LC+ + EA L K + S L ++YN+ + G
Sbjct: 362 MVACGQIPNLVTYSILLDYLCKNHRLAEAMALL----KAIEGSNLDP--DVQVYNIAIDG 415
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ R+ + + RG+ D+ +++I + +CK G +A KL++EM + G +
Sbjct: 416 MCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRN 475
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
YNT+ + + + A+++ EM G V T ++K+L ++G + +L
Sbjct: 476 GCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQSVKQILC 535
Query: 272 E 272
E
Sbjct: 536 E 536
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 131/281 (46%), Gaps = 9/281 (3%)
Query: 102 VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKC 161
V Y ++DALC+Y+ V EA L F E G S V T IY + G K +
Sbjct: 200 VMYSTIIDALCKYQLVSEAYGL-FSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIG--- 255
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
EM + + ++++Y+I +D +CK GK +A + M K +K DV+ Y+T++
Sbjct: 256 --LLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDG 313
Query: 222 VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
+ V A V+ M MG P V T +I C+N V EA + EM +K VP
Sbjct: 314 YFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPG 373
Query: 282 VITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWK 338
++TY L K I L D M + G + TY L+ + G L ++
Sbjct: 374 IVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFN 433
Query: 339 KMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
KM++ G P+ F + L+D L G L A++ +++ KG
Sbjct: 434 KMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKG 474
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 158/333 (47%), Gaps = 11/333 (3%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
Y+++ID L K+ ++ L M S + T+ + + + EA+G N++
Sbjct: 202 YSTIIDALCKYQLVSEAYGLFSEMTVKGIS-ADVVTYSTLIYGFCIEGKLKEAIGLLNEM 260
Query: 94 DEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ V +Y LVDALC+ V EA+ + V V+ + Y+ ++ G+
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGKVKEAKSVLA-----VMLKACVKPD-VITYSTLMDGY 314
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
F + K + + M GV D+H+Y+I ++ CK+ +A+ L+KEM +K + +
Sbjct: 315 FLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGI 374
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V Y+++I + S + + + EM + G +V+T +++I LC+NG + A A+ +
Sbjct: 375 VTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNK 434
Query: 273 MPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M +G P+ T+ L K ++ +F ++ G + TY +++ + G
Sbjct: 435 MKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGL 494
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
L + KME+ GC PD + ++ AL K
Sbjct: 495 LEEALTMLSKMEDNGCIPDAVTFEIIIIALFKK 527
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 159/356 (44%), Gaps = 17/356 (4%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
+N ++D K + + +L HR++ P+ T I+ + + K+
Sbjct: 62 FNKILDSFAKMKHYSTAVSLSHRLELKGIQ-PDLITLNILINCFCHMGQITFGFSVLAKI 120
Query: 94 DEFGLK-DEVSYCNLVDALC---EYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+ G D V+ L+ LC + K + + + GF ++N+ Y ++
Sbjct: 121 LKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ----GF----QLNQVS-YGTLI 171
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G K+ + +++D R ++ YS +D +CK +A L+ EM KGI
Sbjct: 172 NGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGIS 231
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
DVV Y+T+I + + A+ + EM P+V T N ++ LC+ G+V+EA +V
Sbjct: 232 ADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSV 291
Query: 270 LAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
LA M K PDVITY + + + ++ +F+ M G+ P + TY +L+ F +
Sbjct: 292 LAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCK 351
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ ++K+M + P Y++L+D L G + +EM +G A
Sbjct: 352 NKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPA 407
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 111/216 (51%), Gaps = 5/216 (2%)
Query: 170 KRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVD 229
KRG D +++ ++ +C G+ KA+ + ++ +G +++ V+Y T+I V
Sbjct: 989 KRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTR 1048
Query: 230 FAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF- 288
A+++ R++ +P VV NT+I LC++ V +AY + EM KG DV+TY+
Sbjct: 1049 AAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLI 1108
Query: 289 --FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG--FLRPVFVVWKKMEELG 344
F + K +E +GL ++M+ I P + TY +L+ + G L + KME+ G
Sbjct: 1109 YGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNG 1168
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
C + + ++ AL +K D K EM A+GL
Sbjct: 1169 CKANAVTFEIIISALFEKDENDKVEKLLHEMIARGL 1204
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 111/234 (47%), Gaps = 7/234 (2%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
P+ T+ + Y + V +A FN + G+ +V +Y L++ C+ K V EA L
Sbjct: 302 PDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNL 361
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
++ G+V Y+ ++ G K + +EM RG ++ +YS
Sbjct: 362 FKEMHQKNMVPGIVT------YSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSL 415
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D +CK+G +A+ L+ +MK +GI+ + + ++ + + A V++++ G
Sbjct: 416 IDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGY 475
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
+V T N +I C+ G + EA +L++M GC+PD +T+ L K E
Sbjct: 476 HLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKDE 529
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 85/174 (48%), Gaps = 3/174 (1%)
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
++ +N ++ + + A+ + + G QP ++T N +I C G++ ++VLA
Sbjct: 59 IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118
Query: 272 EMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
++ K+G PD +T + + CL+ + ++ L D+++ G + +Y L+ + G
Sbjct: 119 KILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIG 178
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
R + +K++ P+ Y+ ++DAL ++ A EM KG+SA
Sbjct: 179 DTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISA 232
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 3/155 (1%)
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR 290
A+ + + G QP + T N +I C G++ +++LA++ K+G PD IT+
Sbjct: 945 AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004
Query: 291 --CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
CL+ + + L D+++ G + +Y L+ + G R + +K++ P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
D YN ++DAL ++ A EM KG+SA
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISA 1099
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 103/256 (40%), Gaps = 45/256 (17%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWK-AVKLYKEMKKKGIKMDV-------------- 212
M +RGV S Y+ I K + AV L ++ KGI+ D+
Sbjct: 920 MAERGVT----SVGAYIRIPHNPMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMG 975
Query: 213 ---------------------VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
+ + T+I + + V+ A+ + ++ G Q + V+
Sbjct: 976 QITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYG 1035
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIES 308
T+I +C+ G R A +L ++ + PDV+ Y+ L K + + GLF M
Sbjct: 1036 TLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVK 1095
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG--MLD 366
GI + TY L+ F G L+ + KM +P+ YN LVDAL +G +LD
Sbjct: 1096 GISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLD 1155
Query: 367 MARKYDEEMFAKGLSA 382
+ +M G A
Sbjct: 1156 ESLSMLSKMEDNGCKA 1171
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWG 159
D V Y ++DALC+++ V +A L F N G S V T IY + G K +
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVK-GISADVVTYNTLIYGFCIVGKLKEAIG- 1122
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPW--KAVKLYKEMKKKGIKMDVVAYNT 217
+M + + ++ +Y+I +D +CK GK +++ + +M+ G K + V +
Sbjct: 1123 ----LLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEI 1178
Query: 218 VIRAVGVSEGVDFAMRVYREMREMG 242
+I A+ + D ++ EM G
Sbjct: 1179 IISALFEKDENDKVEKLLHEMIARG 1203
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 162/350 (46%), Gaps = 11/350 (3%)
Query: 15 LEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
++FF W HF H + TY ++I L + D W I M +P S+ A + +
Sbjct: 108 IQFFKWAGKRQHFQHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSV-GPAEWSEIL 166
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNVGF 133
K A +VN+A+ F ++ + Y L+ L H + EL + E + G
Sbjct: 167 KILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHEL-YNEICSEGN 225
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
T Y+ ++ + K+ + ++EM + G+ Y+ + + K K
Sbjct: 226 CS----PDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKV 281
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
A++L +EMK KG V Y +I+ +G VD A ++ M + GC+P VV N +
Sbjct: 282 EAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNL 341
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGL-FDRMIESG 309
I +L GR+ +A + +M C P+V+TY+ + + + P L F++M +G
Sbjct: 342 INILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANG 401
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
I P TY +L+ F + + ++ ++M+E G P AY +L+D+L
Sbjct: 402 IAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSL 451
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 175/399 (43%), Gaps = 35/399 (8%)
Query: 16 EFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFK 75
E +N + ++ + + T TY+++I GK +D ++ L MK+N P + +
Sbjct: 215 ELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLH-PTEKIYTTILA 273
Query: 76 RYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKN---- 130
Y + V A+ ++ G V +Y L+ L + V +A L F K+
Sbjct: 274 MYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKP 333
Query: 131 -----------VGFSGLVE--------MNKTK------IYNMILRGWFKMSWWGKCREFW 165
+G +G +E M+ + YN +++ F+ W
Sbjct: 334 DVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALW 393
Query: 166 -EEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGV 224
E+M G+ +Y+I +D CK+ + KA+ L +EM +KG AY ++I ++G
Sbjct: 394 FEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGR 453
Query: 225 SEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
++ + A +++E++E + S +IK GR+ +A + E K GC PDV T
Sbjct: 454 AKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYT 513
Query: 285 YHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKME 341
Y+ + + E L M E+G P + ++ ++L + G + ++ KM+
Sbjct: 514 YNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMK 573
Query: 342 ELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
E PD +YN ++ L GM +MA K EM KG
Sbjct: 574 ESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGF 612
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 123/270 (45%), Gaps = 15/270 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNL----IHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
TYN+VI + FE + +MK N + P+ T+ I+ + + V +A+
Sbjct: 372 TYNTVIKAI---FESKAPASEAALWFEKMKANGIA-PSSFTYAILIDGFCKTNRVEKALL 427
Query: 89 TFNKLDEFGLKD-EVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
++DE G +YC+L+D+L K A EL +N G S ++Y +
Sbjct: 428 LLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSS------ARVYAV 481
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
+++ + + + E +K G D+++Y+ M M ++G +A L + M++ G
Sbjct: 482 MIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENG 541
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
D+ ++N ++ + + G A+ ++ +M+E P V+ NT++ L G A
Sbjct: 542 CTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAA 601
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
++ EM KG D ITY + K E
Sbjct: 602 KLMREMKLKGFEYDSITYSSILEAVGKVDE 631
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 98/216 (45%), Gaps = 13/216 (6%)
Query: 157 WWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
W GK + F D +Y + + +SG + + ++M + + ++
Sbjct: 113 WAGKRQHFQH---------DSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWS 163
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
+++ +G ++ V+ A+ V+ +++ C P+ NT+I +L G + + + E+ +
Sbjct: 164 EILKILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSE 223
Query: 277 G-CVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
G C PD ITY F LE+ LFD M E+G+ P Y +L + + +
Sbjct: 224 GNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEA 283
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
+ ++M+ GC+P F Y L+ L G +D A
Sbjct: 284 ALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDA 319
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 6/196 (3%)
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
K++ + D Y +IR + S VD R ++M C + ++K+L + V
Sbjct: 116 KRQHFQHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMV 175
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESG-IRPKMDTYVM 319
+A +V ++ + C P Y+ L +I L++ + G P TY
Sbjct: 176 NKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSA 235
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L+ FG+ F ++ +M+E G P E Y ++ ++ A + EEM KG
Sbjct: 236 LISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKG 295
Query: 380 LSAKPREELGTKLVQG 395
+ P T+L++G
Sbjct: 296 CA--PTVFTYTELIKG 309
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 168/369 (45%), Gaps = 19/369 (5%)
Query: 22 ETDCHFTHTTDT--YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVT 79
+ D F DT YN ++++L + + L + M + P+ TF + K
Sbjct: 139 QLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIK-PDVVTFNTLMKALCR 197
Query: 80 AHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVE 138
AH V A+ ++ G+ DE ++ L+ E + A + + ++E
Sbjct: 198 AHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRV---------KARMLE 248
Query: 139 M--NKTKI-YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK 195
M + TK+ N+++ G+ K+ + ++ G D +Y+ +++ +C++G
Sbjct: 249 MGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGH 308
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A+K+ M ++G DV YN V+ + + ++ A + +M E GC P + T NT+I
Sbjct: 309 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIV 368
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRP 312
LC R+ EA + ++ KG PDV T++ L K P+ L LF+ M SG P
Sbjct: 369 ALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTP 428
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
TY L+ G L + K+ME GC YN ++D L K ++ A +
Sbjct: 429 DEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVF 488
Query: 373 EEMFAKGLS 381
++M +G+S
Sbjct: 489 DQMDLQGIS 497
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 152/365 (41%), Gaps = 55/365 (15%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P T ++ Y V +A+G + G + D+++Y V+ LC+ HV A ++
Sbjct: 253 PTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKV 312
Query: 124 C-----FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
G + +V F+ YN+++ K + + +M +RG + D+
Sbjct: 313 MDVMVQEGHDPDV-FT----------YNIVVNCLCKNGQLEEAKGILNQMVERGCLPDIT 361
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+++ + +C + +A+ L +++ KG+ DV +N +I A+ A+R++ EM
Sbjct: 362 TFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEM 421
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL------ 292
+ GC P VT NT+I LC G++ +A +L EM GC +TY+ L
Sbjct: 422 KSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRI 481
Query: 293 EKPREILG--------------------------------LFDRMIESGIRPKMDTYVML 320
E+ E+ L +MI G++P TY +
Sbjct: 482 EEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSI 541
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
L + + G ++ + + M G D Y L++ L G +A K M KG+
Sbjct: 542 LTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGM 601
Query: 381 SAKPR 385
A P+
Sbjct: 602 RATPK 606
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 156/335 (46%), Gaps = 11/335 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN V++ L K + + + ++++M + +P+ TF + + + + EA+ +
Sbjct: 327 TYNIVVNCLCKNGQLEEAKGILNQMVER-GCLPDITTFNTLIVALCSGNRLEEALDLARQ 385
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ GL +V N L++ALC+ A L F E K+ G + YN ++
Sbjct: 386 VTLKGLSPDVYTFNILINALCKVGDPQLALRL-FEEMKSSGCT-----PDEVTYNTLIDN 439
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ GK + +EM+ G + +Y+ +D +CK + +A +++ +M +GI +
Sbjct: 440 LCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 499
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ +NT+I + + +D A ++ +M G QP+ +T N+++ C+ G +++A +L
Sbjct: 500 AITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQ 559
Query: 272 EMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M G DV+TY L K + L L M G+R Y +++ R
Sbjct: 560 TMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRN 619
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
R ++++M E+G PD F Y + L G
Sbjct: 620 NTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGG 654
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 145/307 (47%), Gaps = 18/307 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDN--PSS 63
C D + AL F +++ T TYN++ID L + + +L+ M+ P S
Sbjct: 406 CKVGDPQLALRLFEEMKSS-GCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRS 464
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQE 122
T+ + + EA F+++D G+ ++ +++ L+D LC+ K + +A +
Sbjct: 465 T---VTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQ 521
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L + GL N T YN IL + K K + + M G D+ +Y
Sbjct: 522 LI----SQMISEGLQPNNIT--YNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGT 575
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ +CK+G+ A+KL + M+ KG++ AYN VI+++ AM ++REM E+G
Sbjct: 576 LINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVG 635
Query: 243 CQPSVVTCNTVIKLLCENG-RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGL 301
P T V + LC G +REA+ L EM KG +P+ + FR L + LG+
Sbjct: 636 EPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSS----FRMLAEGLLNLGM 691
Query: 302 FDRMIES 308
D I +
Sbjct: 692 DDYFIRA 698
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 152/306 (49%), Gaps = 16/306 (5%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQEL 123
P+H F IMF Y +++EAM F+K+ + L V+Y L+DALC+ V +A
Sbjct: 340 PDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAV-- 397
Query: 124 CFGENKNVGFSGLVEMNKTK---IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+ F+ +++ T +++ ++ G + W K E + E+ +G+ D +
Sbjct: 398 -------LKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFF 450
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ M +C+ G+ +A +L M + G++ DV++YNT++ ++ +D A ++ +
Sbjct: 451 NTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVS 510
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---RE 297
+G +P VT NT++ C+ R+ +AY++ EM KG PDV+TY+ L + E
Sbjct: 511 IGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSE 570
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
L+ MI S + + TY +++ + F+ F ++ + D F N ++
Sbjct: 571 AKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIG 630
Query: 358 ALIDKG 363
AL+ G
Sbjct: 631 ALLKGG 636
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 161/376 (42%), Gaps = 56/376 (14%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG----LKDEVSYCNLVDALCEYKHVIEA 120
P+ ++ I+ K + EA+ + + + G + V+Y ++D LC+ + V A
Sbjct: 162 PDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRA 221
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+ G +++ G+ N T Y ++ G+ + W + + +EM G+ D + Y
Sbjct: 222 K----GVFQHMIDKGVRPNNHT--YTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIY 275
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV------------------ 222
++ +D +CK+G+ +A ++ + +KGIK +V Y ++
Sbjct: 276 AVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVG 335
Query: 223 -GVSEG----------------VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
GVS +D AM ++ +MR+ P++VT +I LC+ GRV +
Sbjct: 336 NGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDD 395
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCL------EKPREILGLFDRMIESGIRPKMDTYVM 319
A +M +G PD+ + L EK E LF +++ GIR +
Sbjct: 396 AVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEE---LFFEVLDQGIRLDTVFFNT 452
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L+ R G + + M +G PD +YN LVD G +D A K + + + G
Sbjct: 453 LMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIG 512
Query: 380 LSAKPREELGTKLVQG 395
L KP + L+ G
Sbjct: 513 L--KPDKVTYNTLLHG 526
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 109/250 (43%), Gaps = 7/250 (2%)
Query: 139 MNKTKIYNMILRGWFKMSWWGKCRE-FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAV 197
+N T I++ +L+G + + M + G D+ SYSI + C + +A+
Sbjct: 125 VNDTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEAL 184
Query: 198 KLYKEMKKKG---IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
+L M G +VV Y TVI + ++ VD A V++ M + G +P+ T +I
Sbjct: 185 ELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLI 244
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIR 311
G+ +E +L EM G PD Y L K E +FD +I GI+
Sbjct: 245 HGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIK 304
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
P + Y +LL + G L + M G SPD +N + A K M+D A
Sbjct: 305 PNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHI 364
Query: 372 DEEMFAKGLS 381
++M + LS
Sbjct: 365 FDKMRQQRLS 374
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 135/325 (41%), Gaps = 13/325 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG--LKDEVSYCNLVDALCEYKHVIEAQE 122
P+ T+ I+ + + F + + G + D V + L+ LC+ K V EA +
Sbjct: 90 PSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATD 149
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRG---VVKDLHS 179
+ G + V Y+++L+G+ + E M G ++ +
Sbjct: 150 ILLRRMPEFGCTPDVFS-----YSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVT 204
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y+ +D +CK+ +A +++ M KG++ + Y +I +++ +EM
Sbjct: 205 YTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMS 264
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---R 296
G QP ++ LC+NGR EA + + +KG P+V Y
Sbjct: 265 THGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLS 324
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
E+ D M+ +G+ P + ++ + + + ++ KM + SP+ Y AL+
Sbjct: 325 EMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALI 384
Query: 357 DALIDKGMLDMARKYDEEMFAKGLS 381
DAL G +D A +M +G++
Sbjct: 385 DALCKLGRVDDAVLKFNQMIDEGMT 409
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 133/300 (44%), Gaps = 39/300 (13%)
Query: 83 VNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
V EA + + G++ D +SY LVD C + EA +L +V S ++ +K
Sbjct: 463 VMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLL-----DVIVSIGLKPDK 517
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
YN +L G+ K + EM +G+ D+ +Y+ + + ++G+ +A +LY
Sbjct: 518 VT-YNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYL 576
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
M +M++ YN +I + + VD A +++ + Q + T N +I L + G
Sbjct: 577 SMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGG 636
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLL 321
R +A + A + G VPDV TY CL + + +I+ G ++D
Sbjct: 637 RKEDAMDLFATISAYGLVPDVETY-----CL--------IAENLIKEGSLEELDE----- 678
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
++ MEE G +P+ NALV L+ +G ++ A Y ++ K S
Sbjct: 679 --------------LFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFS 724
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 100/284 (35%), Gaps = 86/284 (30%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVG---VSEGVDFAMRVYREM-RE--MGCQPSVVT 249
A+KL+ EM V A+N ++ AV S + + ++ M RE + PS T
Sbjct: 35 ALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPSSFT 94
Query: 250 CNTVIKLLCENGRVREAYA-------------------------------------VLAE 272
+I C GR++ +A +L
Sbjct: 95 YTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILLRR 154
Query: 273 MPKKGCVPDVITYHCFFR--CLEK----PREIL--------------------------- 299
MP+ GC PDV +Y + C EK E+L
Sbjct: 155 MPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCK 214
Query: 300 --------GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFA 351
G+F MI+ G+RP TY L+ + G + V + ++M G PD +
Sbjct: 215 AQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYI 274
Query: 352 YNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
Y L+D L G AR + + KG+ KP + L+ G
Sbjct: 275 YAVLLDYLCKNGRCTEARNIFDSVIRKGI--KPNVTIYGILLHG 316
>gi|225460540|ref|XP_002272860.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61360
[Vitis vinifera]
gi|296081020|emb|CBI18524.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 169/386 (43%), Gaps = 21/386 (5%)
Query: 4 LSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
+ ++N +K A EFF + F ++D + + IL + FD +W L+ ++ S
Sbjct: 86 FAAHSNGFK-AFEFFKFSLQHSEFCPSSDAFEKTLHILTRMRYFDKAWELMEEIQQTHPS 144
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLD-------EFGLKDEVSYCNLVDALCEYKH 116
+ + IM R + + F +++ EFG + + L+ A C +
Sbjct: 145 LLTLKSMSIMLSRIAKFQSYEDTLEAFGRMEKNVFFGREFGANE---FNVLLRAFCTQRQ 201
Query: 117 VIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
+ EA+ + + FS TK N++L G+ + F+ EM +RG +
Sbjct: 202 MKEARSVF--HKMHSRFSP-----NTKTMNILLLGFKESGDVTAVELFYHEMIRRGFKPN 254
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
+Y+I +D CK G ++L +EM+K + T+I GV++ + A ++
Sbjct: 255 SVTYNIRIDAYCKKGCFGDGLRLLEEMEKANCPPTLETITTLIHGAGVAQNISRARELFN 314
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR 296
E+ QP + N + L + V+ A ++ EM ++G D +TYH FR L +
Sbjct: 315 EISIRNLQPDIGVYNAFMSSLIRSREVQSALMLMDEMEEEGIGHDSMTYHTMFRGLMRSN 374
Query: 297 EILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
I G L+ +MI PK T VML++ F + L +W + + G P A +
Sbjct: 375 GIEGVSELYHKMIRRNFVPKTRTIVMLMKWFCQNQQLDLSLDLWGYLIDRGYCPHGHALD 434
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKG 379
LV L G + A + ++ +G
Sbjct: 435 LLVTGLCSHGKVKEAVECAKQTLERG 460
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 169/358 (47%), Gaps = 12/358 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRY-VTAHLVNEAMGTFN 91
+ +++ + +++ + + +M+ S P T+ +M Y N+ +G +
Sbjct: 211 AWTTILHAYSRIGKYERAITMFEKMRKTGLS-PTLVTYNVMLDVYGKMGRSWNKILGLLD 269
Query: 92 KLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
++ GL+ + C+ V + C + +++ F K+ G+ + T YN +L+
Sbjct: 270 EMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGY-----VAGTFTYNSLLQV 324
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K + + +EM+K DL +Y+ + ++G + M +KGI +
Sbjct: 325 FGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPN 384
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ Y TVI A G + D A+ +R+M+E GC P+V T N ++ +L + R+ E +L
Sbjct: 385 AITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLC 444
Query: 272 EMPKKGCVPDVITYHCFFR-CLEKP--REILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+M GC P+ +T++ C K + + +F M G P DT+ L+ +GR G
Sbjct: 445 DMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCG 504
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPRE 386
V ++++M + G +P YNAL++AL +G + A +M +KG KP E
Sbjct: 505 SQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGF--KPNE 560
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 112/228 (49%), Gaps = 4/228 (1%)
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPW-KAVKLYK 201
+ + IL + ++ + + +E+M K G+ L +Y++ +D+ K G+ W K + L
Sbjct: 210 RAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLD 269
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
EM+ G++ D +TVI A G +D A + + ++ G T N+++++ + G
Sbjct: 270 EMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAG 329
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYV 318
EA ++L EM K C PD++TY+ + E D MI GI P TY
Sbjct: 330 IYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYT 389
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
++ +G+ G +++M+E GC P+ YNA++ L K L+
Sbjct: 390 TVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLE 437
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 158/408 (38%), Gaps = 55/408 (13%)
Query: 8 ANDWKRALEFFNWV-ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
A +AL FF + E+ C TYN+++ +LGK + +++ M+ N + PN
Sbjct: 398 AGKEDKALSFFRQMKESGC--VPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCA-PN 454
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCF 125
T+ M + F ++ G + + ++ L+ A I+ ++ +
Sbjct: 455 SVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKM-Y 513
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
E GF+ V YN +L + W +M +G + SYS+ ++
Sbjct: 514 EEMIKAGFTPCV-----TTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLN 568
Query: 186 IMCKSGKPWKAVKL-----------------------------------YKEMKKKGIKM 210
K G K+ ++E K G K
Sbjct: 569 CYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKP 628
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
D+V +N+++ ++ D A + R +RE G QP +VT N+++ + G + +L
Sbjct: 629 DLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEIL 688
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
+ K G PD+++Y+ + + +E + M SGIRP + TY + +
Sbjct: 689 KGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGK 748
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
G V V M + C P+E Y +VD +KY E M
Sbjct: 749 GMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCK------GKKYKEAM 790
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 150/358 (41%), Gaps = 23/358 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +VI+ GK + D + + +MK++ +PN T+ + + E +
Sbjct: 387 TYTTVINAYGKAGKEDKALSFFRQMKES-GCVPNVCTYNAILGMLGKKSRLEEMIDMLCD 445
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ G N + A+C K + + F E K+ GF E N+ +N ++ +
Sbjct: 446 MRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGF----EPNR-DTFNALIGAY 500
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
+ + +EEM K G + +Y+ ++ + + G A + +MK KG K +
Sbjct: 501 GRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNE 560
Query: 213 VAYNTVIRAV---GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
+Y+ ++ G G++ ++ E+ PS + T++ + +
Sbjct: 561 TSYSLMLNCYAKGGNGRGIE---KIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERA 617
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDR-------MIESGIRPKMDTYVMLLR 322
E K G PD++ ++ K + ++DR + ESG++P + TY L+
Sbjct: 618 FQEFCKHGYKPDLVLFNSMLSIFAKNK----MYDRAHEMLRLIRESGLQPDLVTYNSLMD 673
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ R G + K +++ G PD +YN ++ +G++ A + EM G+
Sbjct: 674 MYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGI 731
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 4/199 (2%)
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
I+ + + A++L E+ + +DV A+ T++ A + A+ ++ +MR+ G P
Sbjct: 183 ILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSP 242
Query: 246 SVVTCNTVIKLLCENGRV-REAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGL 301
++VT N ++ + + GR + +L EM G D T + E
Sbjct: 243 TLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKF 302
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
F R+ G TY LL+ FG+ G + K+ME+ C PD YN LV A +
Sbjct: 303 FARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVR 362
Query: 362 KGMLDMARKYDEEMFAKGL 380
G + + + M KG+
Sbjct: 363 AGFHEEGADFIDTMIRKGI 381
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 153/383 (39%), Gaps = 47/383 (12%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A +FF ++++ + T TYNS++ + GK + + +++ M+ N + P+ T+ +
Sbjct: 299 ARKFFARLKSEGYVAGTF-TYNSLLQVFGKAGIYSEALSILKEMEKN-NCPPDLVTYNEL 356
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
YV A E + + G + + ++Y +++A K E + L F + +
Sbjct: 357 VAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYG--KAGKEDKALSFF--RQMK 412
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
SG V T YN IL K S + + +M G + +++ + + G
Sbjct: 413 ESGCVPNVCT--YNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGM 470
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
++++EMK G + + +N +I A G +++Y EM + G P V T N
Sbjct: 471 HKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNA 530
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP----------------- 295
++ L G A +V+ +M KG P+ +Y C K
Sbjct: 531 LLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGH 590
Query: 296 ------------------REILGL---FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
R ++G+ F + G +P + + +L F +
Sbjct: 591 IFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAH 650
Query: 335 VVWKKMEELGCSPDEFAYNALVD 357
+ + + E G PD YN+L+D
Sbjct: 651 EMLRLIRESGLQPDLVTYNSLMD 673
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 158/344 (45%), Gaps = 17/344 (4%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
+ T T+N++I L + + LI RM P+ T+ ++ + A
Sbjct: 796 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQ-PDLVTYGVVVNGLCKRGDTDLA 854
Query: 87 MGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
NK+++ L+ V Y ++D LC+YKH+ +A L F E + G V Y
Sbjct: 855 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL-FKEMETKGIRPNV-----VTY 908
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
+ ++ W +M +R + D+ ++S +D K GK +A KLY EM K
Sbjct: 909 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 968
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+ I +V Y+++I + + +D A +++ M C P VVT NT+IK C+ RV E
Sbjct: 969 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEE 1028
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCL------EKPREILGLFDRMIESGIRPKMDTYVM 319
V EM ++G V + +TY+ + L + +EI F M+ G+ P + TY
Sbjct: 1029 GMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI---FKEMVSDGVPPNIMTYNT 1085
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
LL + G L VV++ ++ P + YN +++ + G
Sbjct: 1086 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 1129
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 177/370 (47%), Gaps = 19/370 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N VI+ F+ L+ +++ +M P+ T + + + V++A+ +K
Sbjct: 225 TFNIVINCFCCCFQVSLALSILGKML-KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 283
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G K D V+Y ++D+LC+ K V +A + F E + G V Y ++ G
Sbjct: 284 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF-FKEIERKGIRPNV-----VTYTALVNG 337
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
S W +M K+ + ++ +YS +D K+GK +A +L++EM + I D
Sbjct: 338 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 397
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+V Y+++I + + + +D A +++ M GC VV+ NT+I C+ RV + +
Sbjct: 398 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 457
Query: 272 EMPKKGCVPDVITYHC----FFRC--LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
EM ++G V + +TY+ FF+ ++K +E F +M GI P + TY +LL
Sbjct: 458 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE---FFSQMDFFGISPDIWTYNILLGGLC 514
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
G L V+++ M++ D Y ++ + G ++ A + KGL KP
Sbjct: 515 DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL--KPD 572
Query: 386 EELGTKLVQG 395
T ++ G
Sbjct: 573 IVTYTTMMSG 582
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 175/387 (45%), Gaps = 48/387 (12%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP-NHATFRIMFKRYVTAHLVNEAMGTFNK 92
++ ++ + K +FD+ +L +M++ IP NH T+ I+ + + A+ K
Sbjct: 698 FSKLLSAIAKMNKFDVVISLGEQMQN--LGIPHNHYTYSILINCFCRRSQLPLALAVLGK 755
Query: 93 LDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + G + V+ +L++ C K + EA L + F + N T +N ++ G
Sbjct: 756 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV-----DQMFVTGYQPN-TVTFNTLIHG 809
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
F + + + M +G DL +Y + ++ +CK G A L +M++ ++
Sbjct: 810 LFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPG 869
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V+ YNT+I + + +D A+ +++EM G +P+VVT +++I LC GR +A +L+
Sbjct: 870 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 929
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYV---------- 318
+M ++ PDV T+ K +++ L+D M++ I P + TY
Sbjct: 930 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 989
Query: 319 -------------------------MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
L++ F ++ + V+++M + G + YN
Sbjct: 990 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 1049
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGL 380
L+ L G DMA++ +EM + G+
Sbjct: 1050 ILIQGLFQAGDCDMAQEIFKEMVSDGV 1076
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY V++ L K + DL++NL+++M+ P + + +++A+ F +
Sbjct: 837 TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE-PGVLIYNTIIDGLCKYKHMDDALNLFKE 895
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE-----NKNV-GFSGLV-------- 137
++ G++ + V+Y +L+ LC Y +A L N +V FS L+
Sbjct: 896 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 955
Query: 138 ---------EMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
EM K I Y+ ++ G+ + ++ +E M + D+ +Y+
Sbjct: 956 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 1015
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ CK + + +++++EM ++G+ + V YN +I+ + + D A +++EM G
Sbjct: 1016 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 1075
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG-- 300
P+++T NT++ LC+NG++ +A V + + P + TY+ + K ++
Sbjct: 1076 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 1135
Query: 301 -LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
LF + G++P + Y ++ F R G ++K+M+E G P+ YN L+ A
Sbjct: 1136 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRAR 1195
Query: 360 IDKGMLDMARKYDEEMFAKGLSA 382
+ G + + + +EM + G +
Sbjct: 1196 LRDGDREASAELIKEMRSCGFAG 1218
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 173/363 (47%), Gaps = 18/363 (4%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
AL F +ET TY+S+I L + + + L+ M + + P+ TF +
Sbjct: 889 ALNLFKEMETK-GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN-PDVFTFSAL 946
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELC-FGENKNV 131
+V + EA ++++ + + V+Y +L++ C + + EA+++ F +K+
Sbjct: 947 IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 1006
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
F +V YN +++G+ K + E + EM +RG+V + +Y+I + + ++G
Sbjct: 1007 -FPDVV------TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 1059
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
A +++KEM G+ +++ YNT++ + + ++ AM V+ ++ +P++ T N
Sbjct: 1060 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 1119
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPR-EILGLFDRMIES 308
+I+ +C+ G+V + + + + KG PDV+ Y+ C + + E LF M E
Sbjct: 1120 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 1179
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE----FAYNALVDALIDKGM 364
G P Y L+R R G + K+M G + D N L D +DK
Sbjct: 1180 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSF 1239
Query: 365 LDM 367
LDM
Sbjct: 1240 LDM 1242
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 138/276 (50%), Gaps = 15/276 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDIL---GKFFEFDLSWNLIHRMKDNPS 62
C ++ W A + + T TY++++D GK E + + RM +P
Sbjct: 339 CNSSRWSDAARLLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 397
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQ 121
+ T+ + ++EA F+ + G L D VSY L++ C+ K V +
Sbjct: 398 IV----TYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 453
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
+L F E G ++ T YN +++G+F+ K +EF+ +MD G+ D+ +Y+
Sbjct: 454 KL-FREMSQRGL-----VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 507
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
I + +C +G+ KA+ ++++M+K+ + +D+V Y TVIR + + V+ A ++ +
Sbjct: 508 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 567
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
G +P +VT T++ LC G + E A+ +M ++G
Sbjct: 568 GLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 603
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 118/257 (45%), Gaps = 11/257 (4%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y++++ + + S +M K G ++ + S ++ C S + +AV L +M
Sbjct: 733 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 792
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
G + + V +NT+I + + AM + M GCQP +VT V+ LC+ G
Sbjct: 793 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 852
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
A+ +L +M + P V+ Y+ L K + + L LF M GIRP + TY L+
Sbjct: 853 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 912
Query: 322 R---KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+GRW + M E +PD F ++AL+DA + +G L A K +EM +
Sbjct: 913 SCLCNYGRWS---DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 969
Query: 379 GLSAKPREELGTKLVQG 395
S P + L+ G
Sbjct: 970 --SIDPSIVTYSSLING 984
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 115/241 (47%), Gaps = 3/241 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+N +L K+ + ++M+ G+ DL++++I ++ C + A+ + +M
Sbjct: 191 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 250
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K G + D V +++ V A+ + +M E+G +P +V N +I LC+ RV
Sbjct: 251 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 310
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLL 321
+A+ E+ +KG P+V+TY L + + L MI+ I P + TY LL
Sbjct: 311 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 370
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
F + G + ++++M + PD Y++L++ L +D A + + M +KG
Sbjct: 371 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 430
Query: 382 A 382
A
Sbjct: 431 A 431
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 174/430 (40%), Gaps = 66/430 (15%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTD--TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
A D +A EFF+ ++ F + D TYN ++ L E + + + M+ +
Sbjct: 481 AGDVDKAQEFFSQMD---FFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL- 536
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ + + V EA F L GLK D V+Y ++ LC K ++ E
Sbjct: 537 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT-KGLLHEVEAL 595
Query: 125 FGENKNVGF--------SGLVEMNKTKIYNMILRGW----FKMSWWGKCREFWEEMDKRG 172
+ + K G G + ++ I M+ G+ K G C++ +
Sbjct: 596 YTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLR--- 652
Query: 173 VVKDLHSYSIYMDIMCKSG----KPWKAVKLYKEMKK------------------KGIKM 210
SY Y + + ++G K AV L+ EM K K K
Sbjct: 653 AFSGKTSYD-YREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKF 711
Query: 211 DVV-----------------AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
DVV Y+ +I + A+ V +M ++G +P++VT +++
Sbjct: 712 DVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSL 771
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGI 310
+ C + R+ EA A++ +M G P+ +T++ L K E + L DRM+ G
Sbjct: 772 LNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGC 831
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
+P + TY +++ + G F + KME+ P YN ++D L +D A
Sbjct: 832 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 891
Query: 371 YDEEMFAKGL 380
+EM KG+
Sbjct: 892 LFKEMETKGI 901
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 106/236 (44%), Gaps = 5/236 (2%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+ + +M K + ++ + + K K + L K+M+ GI+ D+ +N VI
Sbjct: 174 DLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCF 233
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
V A+ + +M ++G +P VT +++ C RV +A +++ +M + G PD+
Sbjct: 234 CCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDI 293
Query: 283 ITYHCFFRCLEKPREILGLFDRMIE---SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
+ Y+ L K + + FD E GIRP + TY L+ +
Sbjct: 294 VAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSD 353
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
M + +P+ Y+AL+DA + G + A++ EEM +S P + L+ G
Sbjct: 354 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR--MSIDPDIVTYSSLING 407
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 169/371 (45%), Gaps = 18/371 (4%)
Query: 3 TLSCYANDW---KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLS--WNLIHRM 57
TLS N + KR + V+ + DT+ I G F S L+ +M
Sbjct: 155 TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM 214
Query: 58 KDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKH 116
P+ T+ + ++ A+ K+++ ++ D V Y ++D LC+YKH
Sbjct: 215 VQRGCQ-PDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 273
Query: 117 VIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
+ +A L F E N G V Y+ ++ W +M +R + +
Sbjct: 274 MDDALNL-FTEMDNKGIRPDV-----FTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 327
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
+ ++S +D K GK +A KLY EM K+ I D+ Y+++I + + +D A ++
Sbjct: 328 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 387
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY----HCFFRCL 292
M C P+VVT +T+IK C+ RV E + EM ++G V + +TY H FF+
Sbjct: 388 LMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 447
Query: 293 EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
+ + +F +M+ G+ P + TY +LL + G L VV++ ++ PD + Y
Sbjct: 448 DCDNAQM-VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 506
Query: 353 NALVDALIDKG 363
N +++ + G
Sbjct: 507 NIMIEGMCKAG 517
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 165/354 (46%), Gaps = 17/354 (4%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
+N ++ + K +F+L +L +M+ S + T+ I + ++ A+ K+
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGIS-HDLYTYSIFINCFCRRSQLSLALAVLAKM 144
Query: 94 DEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIYNMIL 149
+ G + D V+ +L++ C K + +A L +VEM T + ++
Sbjct: 145 MKLGYEPDIVTLSSLLNGYCHSKRISDAVAL---------VDQMVEMGYKPDTFTFTTLI 195
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G F + + ++M +RG DL +Y ++ +CK G A+ L K+M+K I+
Sbjct: 196 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 255
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
DVV YNT+I + + +D A+ ++ EM G +P V T +++I LC GR +A +
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGR 326
L++M ++ P+V+T+ K +++ L+D MI+ I P + TY L+ F
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
L +++ M C P+ Y+ L+ ++ + EM +GL
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL 429
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 175/383 (45%), Gaps = 34/383 (8%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +V++ L K + DL+ +L+ +M+ + + + +++A+ F +
Sbjct: 225 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIE-ADVVIYNTIIDGLCKYKHMDDALNLFTE 283
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGE-----NKNV-GFSGLV-------- 137
+D G++ +V +Y +L+ LC Y +A L N NV FS L+
Sbjct: 284 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 343
Query: 138 ---------EMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
EM K I Y+ ++ G+ + + +E M + ++ +YS
Sbjct: 344 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYST 403
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ CK+ + + ++L++EM ++G+ + V Y T+I + D A V+++M +G
Sbjct: 404 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 463
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG-- 300
P+++T N ++ LC+NG++ +A V + + PD+ TY+ + K ++
Sbjct: 464 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGW 523
Query: 301 -LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
LF + G+ P + Y ++ F R G + KKM+E G P+ YN L+ A
Sbjct: 524 ELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRAR 583
Query: 360 IDKGMLDMARKYDEEMFAKGLSA 382
+ G + + + +EM + G +
Sbjct: 584 LRDGDREASAELIKEMRSCGFAG 606
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 102/221 (46%), Gaps = 3/221 (1%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+ + +M K + ++ + + K K + L ++M+ GI D+ Y+ I
Sbjct: 69 DLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF 128
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
+ A+ V +M ++G +P +VT ++++ C + R+ +A A++ +M + G PD
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 283 ITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
T+ L K E + L D+M++ G +P + TY ++ + G + + KK
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK 248
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
ME+ D YN ++D L +D A EM KG+
Sbjct: 249 MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 119/253 (47%), Gaps = 8/253 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+S+I+ D + ++ M + PN T+ + K + A V E M F +
Sbjct: 365 TYSSLINGFCMHDRLDEAKHMFELMI-SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + GL + V+Y L+ + + AQ + F + +VG V N YN++L G
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQ-MVFKQMVSVG----VHPN-ILTYNILLDG 477
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K K +E + + + D+++Y+I ++ MCK+GK +L+ + KG+ +
Sbjct: 478 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPN 537
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V+AYNT+I + A + ++M+E G P+ T NT+I+ +G + ++
Sbjct: 538 VIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIK 597
Query: 272 EMPKKGCVPDVIT 284
EM G D T
Sbjct: 598 EMRSCGFAGDAST 610
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 3/176 (1%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
AV L+ +M K +V +N ++ AV + + + +M+ +G + T + I
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKP-REILGLFDRMIESGIRP 312
C ++ A AVLA+M K G PD++T C K + + L D+M+E G +P
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
T+ L+ + +M + GC PD Y +V+ L +G +D+A
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 66/155 (42%), Gaps = 3/155 (1%)
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
VD A+ ++ +M + PS+V N ++ + + + ++ +M G D+ TY
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 288 FFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
F C + ++ L + +M++ G P + T LL + + + +M E+G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
PD F + L+ L A ++M +G
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 167/399 (41%), Gaps = 52/399 (13%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
Y D +AL FN V+ + F HT TY +I+ LG EFD ++ M+ N +
Sbjct: 16 YQKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLL 75
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFG 126
+ + Y V EA+ F ++D + + +
Sbjct: 76 EGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSI------------------------ 111
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
FS YN I+ + ++ + + + M G+ D+ +++I +
Sbjct: 112 ------FS----------YNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKS 155
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
C++ +P A++L M +G +++ V Y TVI A ++ +M +G P
Sbjct: 156 FCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPH 215
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL----------EKPR 296
+ T N ++ +LC+ G ++E +L ++ K G P++ T++ F + L K
Sbjct: 216 IATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVV 275
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
E +M+ G+ P TY ++ + + G ++ + K + G PDEF Y +L+
Sbjct: 276 EAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLI 335
Query: 357 DALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+ G +D A EE KGL KP L L++G
Sbjct: 336 IGVCQDGDIDHALALFEEALGKGL--KPSIVLYNTLIKG 372
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 151/333 (45%), Gaps = 12/333 (3%)
Query: 52 NLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDA 110
N +H+M N P+ T+ + Y + +A G + DE +YC+L+
Sbjct: 279 NYLHKMV-NKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIG 337
Query: 111 LCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDK 170
+C+ + A L F E G + + YN +++G + K + +M K
Sbjct: 338 VCQDGDIDHALAL-FEEALGKGLKPSIVL-----YNTLIKGLSQQGLVLKALQLMNDMSK 391
Query: 171 RGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF 230
G+ D+ +Y++ ++ +CK G A L KG D+ +NT+I +D
Sbjct: 392 EGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDN 451
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR 290
A+ + M G P V+T N+++ LC+ + + + +KGC+P++ITY+
Sbjct: 452 AIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIE 511
Query: 291 CLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
L K R E L L + + G+ P ++ ++ F G L + ++++ME+
Sbjct: 512 SLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRIC 571
Query: 348 DEFA-YNALVDALIDKGMLDMARKYDEEMFAKG 379
A YN +++A +K +DMA+K EM KG
Sbjct: 572 HTVATYNIMINAFSEKLDMDMAQKLFHEMGDKG 604
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 176/427 (41%), Gaps = 76/427 (17%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRY-------VTAHLVN- 84
+YN++++IL ++ F+ + + RMK + P+ TF I K + L+N
Sbjct: 113 SYNAIMNILVEYGYFNQAHKVYLRMK-HEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNN 171
Query: 85 ---------------------------EAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKH 116
EA FNK+ G+ ++ N L+ LC+ H
Sbjct: 172 MPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGH 231
Query: 117 VIEAQELCFGENKN---------------VGFSGLVEMNKTKI----------------- 144
+ E ++L KN + G++E +K+
Sbjct: 232 LQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEP 291
Query: 145 ----YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
YN I+ G+ K+ ++ +G V D +Y + +C+ G A+ L+
Sbjct: 292 DDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALF 351
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
+E KG+K +V YNT+I+ + V A+++ +M + G P + T N VI LC+
Sbjct: 352 EEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKM 411
Query: 261 GRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTY 317
G V +A +L KG +PD+ T++ K ++ +G+ D M G+ P + TY
Sbjct: 412 GCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITY 471
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
+L + V +K + E GC P+ YN L+++L + A EE+
Sbjct: 472 NSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRN 531
Query: 378 KGLSAKP 384
+GL P
Sbjct: 532 RGLIPDP 538
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 153/366 (41%), Gaps = 19/366 (5%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A E FN + F H T+N ++ IL K L++++ N PN TF I
Sbjct: 200 AYELFNKMLRLGIFPHIA-TFNKLMHILCKKGHLQEGEKLLNKVLKN-GVCPNLFTFNIF 257
Query: 74 FKRYVTAHL-------VNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCF 125
+ + V EA +K+ GL+ D+ +Y ++ + + +A +
Sbjct: 258 IQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRIL- 316
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
K+ F G V T Y ++ G + +EE +G+ + Y+ +
Sbjct: 317 ---KDAKFKGFVPDEFT--YCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIK 371
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
+ + G KA++L +M K+G+ D+ YN VI + V A + G P
Sbjct: 372 GLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLP 431
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLF 302
+ T NT+I C+ ++ A +L M G PDVITY+ L KP +++ F
Sbjct: 432 DIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETF 491
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
++E G P + TY +L+ + + + +++ G PD ++ ++ +
Sbjct: 492 KMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNN 551
Query: 363 GMLDMA 368
G LD A
Sbjct: 552 GDLDEA 557
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 129/289 (44%), Gaps = 18/289 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN VI+ L K + NL++ +P+ TF + Y ++ A+G +
Sbjct: 400 TYNLVINGLCKMGCVSDANNLLNAAIAK-GYLPDIFTFNTLIDGYCKRLKMDNAIGILDS 458
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVE---MNKTKIYNMI 148
+ G+ D ++Y ++++ LC+ + E F ++E + YN++
Sbjct: 459 MWSHGVTPDVITYNSILNGLCKAAKPEDVMET---------FKMIMEKGCLPNIITYNIL 509
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK-G 207
+ K + + EE+ RG++ D S+ + C +G +A +L++ M+++
Sbjct: 510 IESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYR 569
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
I V YN +I A +D A +++ EM + GC P T +I C+ G V Y
Sbjct: 570 ICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGY 629
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPK 313
L + + G VP + T+ CL + E +G+ M+ +G+ P+
Sbjct: 630 DFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPE 678
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 117/258 (45%), Gaps = 17/258 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N++ID K + D + ++ M + + P+ T+ + A + M TF
Sbjct: 435 TFNTLIDGYCKRLKMDNAIGILDSMWSHGVT-PDVITYNSILNGLCKAAKPEDVMETFKM 493
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G L + ++Y L+++LC+ + V EA +L E +N G + + ++ G
Sbjct: 494 IMEKGCLPNIITYNILIESLCKARKVTEALDL-LEEIRNRGL-----IPDPVSFGTVISG 547
Query: 152 WFKMSWWGKCREFWEEMDKR-GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
+ + + + M+++ + + +Y+I ++ + A KL+ EM KG
Sbjct: 548 FCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDP 607
Query: 211 DVVAYNTVI----RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
D Y +I + V+ G DF ++ E+G PS+ T VI LC RV EA
Sbjct: 608 DSYTYRVMIDGFCKVGNVNSGYDFLLKEI----EIGFVPSLTTFGRVINCLCVQHRVHEA 663
Query: 267 YAVLAEMPKKGCVPDVIT 284
++ M + G VP+ +
Sbjct: 664 VGIVHLMVRTGVVPEAVV 681
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 2/116 (1%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C D A + F +E HT TYN +I+ + + D++ L H M D P
Sbjct: 549 CNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCD-P 607
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEA 120
+ T+R+M + VN K E G + ++ +++ LC V EA
Sbjct: 608 DSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEA 663
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 155/319 (48%), Gaps = 10/319 (3%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+PN TF I+ Y + +A+ N + ++ D V+Y ++DALC+ + +A++
Sbjct: 205 VPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARD 264
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L ++ GL+ T YN+++ G+ KM W + E M + ++ D+ +Y++
Sbjct: 265 LLM----DMKSRGLLPNRNT--YNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNM 318
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ +C G+ +A KL EM+ + DVV+YNT+I + A ++ EM E G
Sbjct: 319 LINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKG 378
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLF 302
+P+ VT N ++K C+ G++ +A + +M + G PD +TY+ K + F
Sbjct: 379 VKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAF 438
Query: 303 DRMIESGIRP-KMDTYVM--LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
M E G + KMD+ + +LR R L + + + G DE +Y L+
Sbjct: 439 RTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGY 498
Query: 360 IDKGMLDMARKYDEEMFAK 378
G +D A K +EM K
Sbjct: 499 FKDGNVDRALKLWDEMKEK 517
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 157/357 (43%), Gaps = 23/357 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+YN++I+ ++ + ++ L+ M + PN T IM K Y +++A T K
Sbjct: 350 SYNTLINGCLEWSKISEAFKLLEEMSEKGVK-PNAVTHNIMVKWYCKEGKMDDASNTITK 408
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI------Y 145
++E G D V+Y L++ C+ ++ EA F + EM + +
Sbjct: 409 MEESGFSPDCVTYNTLINGYCKAGNMGEA------------FRTMDEMGRKNMKMDSVTL 456
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N ILR + + + KRG D SY + K G +A+KL+ EMK+
Sbjct: 457 NTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKE 516
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
K I V YN +I + + A+ E+ E G P T NT++ C G V +
Sbjct: 517 KEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEK 576
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFR--CLEKPRE-ILGLFDRMIESGIRPKMDTYVMLLR 322
A+ +M + PDV T + R C+E E L LF+ + G TY L+
Sbjct: 577 AFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLIT 636
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ G L F + +MEE PD + YNA++ AL D G + A ++ +M KG
Sbjct: 637 SLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKG 693
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 101/193 (52%), Gaps = 6/193 (3%)
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV---GVSEGVDFAMRVYREMREMGCQP 245
+SG+P A +++K+MK+ ++ +++ NT++ ++ S V F+ + + ++G P
Sbjct: 147 QSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVP 206
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRM 305
+V T N VI C + ++A L M K C PD +TY+ L K + D +
Sbjct: 207 NVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLL 266
Query: 306 IE---SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
++ G+ P +TY +L+ + + G+L+ V + M + PD + YN L++ L ++
Sbjct: 267 MDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNE 326
Query: 363 GMLDMARKYDEEM 375
G ++ A K +EM
Sbjct: 327 GRIEEAFKLRDEM 339
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 136/355 (38%), Gaps = 77/355 (21%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQEL 123
P+ A YV + + A F K+ L+ + CN L+++L Y
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYP-------- 184
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ +V FS RE + + K G+V ++++++I
Sbjct: 185 ---SSHSVSFS---------------------------REAFNDAIKLGIVPNVNTFNIV 214
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV----GVSEGVDFAM------- 232
+ C K AV+ M K D V YNT++ A+ + + D M
Sbjct: 215 IYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGL 274
Query: 233 ------------------------RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
V M + P V T N +I LC GR+ EA+
Sbjct: 275 LPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFK 334
Query: 269 VLAEMPKKGCVPDVITYHCFFR-CLE--KPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ EM +PDV++Y+ CLE K E L + M E G++P T+ ++++ +
Sbjct: 335 LRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYC 394
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ G + KMEE G SPD YN L++ G + A + +EM K +
Sbjct: 395 KEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNM 449
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 75/147 (51%), Gaps = 2/147 (1%)
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
SGL+ T YN IL G+ + K +F +M + D+ + +I + +C G
Sbjct: 552 SGLLPDETT--YNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGML 609
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
KA+KL+ KG +D V YNT+I ++ +D A + EM E P T N +
Sbjct: 610 EKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAI 669
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVP 280
I L ++GR+REA +++M +KG +P
Sbjct: 670 ITALTDSGRIREAEEFMSKMLEKGXLP 696
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 160/347 (46%), Gaps = 17/347 (4%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
+ T T+N++I L + + LI RM P+ T+ ++ + A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQ-PDLVTYGVVVNGLCKRGDTDLA 240
Query: 87 MGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
NK+++ L+ V Y ++D LC+YKH+ +A L F E + G V Y
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL-FKEMETKGIRPNV-----VTY 294
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
+ ++ W +M +R + D+ ++S +D K GK +A KLY EM K
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+ I +V Y+++I + + +D A +++ M C P VVT NT+IK C+ RV E
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEE 414
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCL------EKPREILGLFDRMIESGIRPKMDTYVM 319
V EM ++G V + +TY+ + L + +EI F M+ G+ P + TY
Sbjct: 415 GMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI---FKEMVSDGVPPNIMTYNT 471
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
LL + G L VV++ ++ P + YN +++ + G ++
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 175/387 (45%), Gaps = 48/387 (12%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP-NHATFRIMFKRYVTAHLVNEAMGTFNK 92
++ ++ + K +FD+ +L +M++ IP NH T+ I+ + + A+ K
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQN--LGIPHNHYTYSILINCFCRRSQLPLALAVLGK 141
Query: 93 LDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + G + V+ +L++ C K + EA L + F + N T +N ++ G
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV-----DQMFVTGYQPN-TVTFNTLIHG 195
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
F + + + M +G DL +Y + ++ +CK G A L +M++ ++
Sbjct: 196 LFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPG 255
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V+ YNT+I + + +D A+ +++EM G +P+VVT +++I LC GR +A +L+
Sbjct: 256 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYV---------- 318
+M ++ PDV T+ K +++ L+D M++ I P + TY
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 319 -------------------------MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
L++ F ++ + V+++M + G + YN
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGL 380
L+ L G DMA++ +EM + G+
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY V++ L K + DL++NL+++M+ P + + +++A+ F +
Sbjct: 223 TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE-PGVLIYNTIIDGLCKYKHMDDALNLFKE 281
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE-----NKNV-GFSGLV-------- 137
++ G++ + V+Y +L+ LC Y +A L N +V FS L+
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 138 ---------EMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
EM K I Y+ ++ G+ + ++ +E M + D+ +Y+
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ CK + + +++++EM ++G+ + V YN +I+ + + D A +++EM G
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG-- 300
P+++T NT++ LC+NG++ +A V + + P + TY+ + K ++
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521
Query: 301 -LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
LF + G++P + Y ++ F R G ++K+M+E G P+ YN L+ A
Sbjct: 522 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRAR 581
Query: 360 IDKGMLDMARKYDEEMFAKGLSA 382
+ G + + + +EM + G +
Sbjct: 582 LRDGDREASAELIKEMRSCGFAG 604
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 174/371 (46%), Gaps = 18/371 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C AL F +ET TY+S+I L + + + L+ M + + P
Sbjct: 267 CKYKHMDDALNLFKEMETK-GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN-P 324
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELC 124
+ TF + +V + EA ++++ + + V+Y +L++ C + + EA+++
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 125 -FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F +K+ F +V YN +++G+ K + E + EM +RG+V + +Y+I
Sbjct: 385 EFMVSKHC-FPDVV------TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ + ++G A +++KEM G+ +++ YNT++ + + ++ AM V+ ++
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPR-EILG 300
+P++ T N +I+ +C+ G+V + + + + KG PDV+ Y+ C + + E
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE----FAYNALV 356
LF M E G P Y L+R R G + K+M G + D N L
Sbjct: 558 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLH 617
Query: 357 DALIDKGMLDM 367
D +DK LDM
Sbjct: 618 DGRLDKSFLDM 628
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 118/257 (45%), Gaps = 11/257 (4%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y++++ + + S +M K G ++ + S ++ C S + +AV L +M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
G + + V +NT+I + + AM + M GCQP +VT V+ LC+ G
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
A+ +L +M + P V+ Y+ L K + + L LF M GIRP + TY L+
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 322 R---KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+GRW + M E +PD F ++AL+DA + +G L A K +EM +
Sbjct: 299 SCLCNYGRWS---DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 379 GLSAKPREELGTKLVQG 395
S P + L+ G
Sbjct: 356 --SIDPSIVTYSSLING 370
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 38/223 (17%)
Query: 196 AVKLYKEMKK------------------KGIKMDVV-----------------AYNTVIR 220
AV L+ EM K K K DVV Y+ +I
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 221 AVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVP 280
+ A+ V +M ++G +P++VT ++++ C + R+ EA A++ +M G P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 281 DVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVW 337
+ +T++ L K E + L DRM+ G +P + TY +++ + G F +
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 338 KKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
KME+ P YN ++D L +D A +EM KG+
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 160/346 (46%), Gaps = 30/346 (8%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+P+ TF + +NEA N++ G D+++Y L++ LC+ V A++
Sbjct: 278 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKD 337
Query: 123 LCFGENK--NVGFSGLVE-------MNKTK-----------------IYNMILRGWFKMS 156
L + K +V F+ L+ ++ K YN ++ G++K
Sbjct: 338 LFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKG 397
Query: 157 WWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
G E +M +G +++SY+I +D CK GK +A L EM G+K + V +N
Sbjct: 398 LVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFN 457
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
+I A + A+ ++REM GC+P V T N++I LCE ++ A +L +M +
Sbjct: 458 CLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 517
Query: 277 GCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
G V + +TY+ + EI L + M+ G TY L++ R G +
Sbjct: 518 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKA 577
Query: 334 FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+++KM G P + N L++ L GM++ A ++ +EM +G
Sbjct: 578 RSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRG 623
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 160/344 (46%), Gaps = 11/344 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS+I K L+ ++ M+ N PN ++ I+ + ++EA N+
Sbjct: 385 TYNSLIYGYWKKGLVGLALEVLRDMR-NKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNE 443
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ GLK + V + L+ A C+ + EA E+ F E G V + I +
Sbjct: 444 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEI-FREMPRKGCKPDVYTFNSLISGLCEVD 502
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + W +M GVV + +Y+ ++ + G+ +A KL EM +G +D
Sbjct: 503 EIKHALW-----LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLD 557
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ YN++I+ + + VD A ++ +M G PS ++CN +I LC +G V EA
Sbjct: 558 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQK 617
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM +G PD++T++ L + I L +F ++ GI P TY L+ + G
Sbjct: 618 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGG 677
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
F+ ++ + E G P++ ++ L+ +L+ + LD Y+
Sbjct: 678 FVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDRRTFYN 721
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 158/407 (38%), Gaps = 77/407 (18%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D ++E F+W + + H+ D Y +I LG EF L+ +MKD
Sbjct: 84 DVSTSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEG-------- 135
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENK 129
I+FK + ++ + D+ G + + L E ++V +
Sbjct: 136 --IVFKESLFISIMRD-------YDKAGFPGQTTRLML-----EMRNVYSCEP------- 174
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
K YN++L + + +M R + L ++ + M +C
Sbjct: 175 -----------TFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCA 223
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
+ A+ + ++M K G + V Y T+I ++ V+ A+++ EM MGC P T
Sbjct: 224 VNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAET 283
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY-----------------HCFFRCL 292
N VI LC+ R+ EA ++ M +G PD ITY F+R +
Sbjct: 284 FNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYR-I 342
Query: 293 EKPREIL-------------------GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
KP ++ L D + GI P + TY L+ + + G +
Sbjct: 343 PKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLA 402
Query: 334 FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
V + M GC P+ ++Y LVD G +D A EM A GL
Sbjct: 403 LEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGL 449
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 154/359 (42%), Gaps = 16/359 (4%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T +YN V++IL ++ N+ + M P TF ++ K + V+ A+
Sbjct: 175 TFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIP-PTLFTFGVVMKALCAVNEVDSALSV 233
Query: 90 FNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
+ + G + + V Y L+ +L + V EA +L + + G V +T +N +
Sbjct: 234 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLL----EEMFLMGCVPDAET--FNDV 287
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G K + + M RG D +Y M+ +CK G+ A L+ + K
Sbjct: 288 ILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKP-- 345
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREM-REMGCQPSVVTCNTVIKLLCENGRVREAY 267
V +NT+I +D A V +M G P V T N++I + G V A
Sbjct: 346 --TSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLAL 403
Query: 268 AVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
VL +M KGC P+V +Y F L K E L + M G++P + L+ F
Sbjct: 404 EVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAF 463
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAK 383
+ + ++++M GC PD + +N+L+ L + + A +M ++G+ A
Sbjct: 464 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 522
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 169/358 (47%), Gaps = 12/358 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRY-VTAHLVNEAMGTFN 91
+ +++ + +++ + + +M+ S P T+ +M Y N+ +G +
Sbjct: 211 AWTTILHAYSRIGKYERAITMFEKMRKTGLS-PTLVTYNVMLDVYGKMGRSWNKILGLLD 269
Query: 92 KLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
++ GL+ + C+ V + C + +++ F K+ G+ + T YN +L+
Sbjct: 270 EMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGY-----VAGTFTYNSLLQV 324
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K + + +EM+K DL +Y+ + ++G + M +KGI +
Sbjct: 325 FGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPN 384
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ Y TVI A G + D A+ +R+M+E GC P+V T N ++ +L + R+ E +L
Sbjct: 385 AITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLC 444
Query: 272 EMPKKGCVPDVITYHCFFR-CLEKP--REILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+M GC P+ +T++ C K + + +F M G P DT+ L+ +GR G
Sbjct: 445 DMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCG 504
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPRE 386
V ++++M + G +P YNAL++AL +G + A +M +KG KP E
Sbjct: 505 SQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGF--KPNE 560
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 112/228 (49%), Gaps = 4/228 (1%)
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPW-KAVKLYK 201
+ + IL + ++ + + +E+M K G+ L +Y++ +D+ K G+ W K + L
Sbjct: 210 RAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLD 269
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
EM+ G++ D +TVI A G +D A + + ++ G T N+++++ + G
Sbjct: 270 EMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAG 329
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYV 318
EA ++L EM K C PD++TY+ + E D MI GI P TY
Sbjct: 330 IYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYT 389
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
++ +G+ G +++M+E GC P+ YNA++ L K L+
Sbjct: 390 TVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLE 437
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 158/408 (38%), Gaps = 55/408 (13%)
Query: 8 ANDWKRALEFFNWV-ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
A +AL FF + E+ C TYN+++ +LGK + +++ M+ N + PN
Sbjct: 398 AGKEDKALSFFRQMKESGC--VPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCA-PN 454
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCF 125
T+ M + F ++ G + + ++ L+ A I+ ++ +
Sbjct: 455 SVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKM-Y 513
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
E GF+ V YN +L + W +M +G + SYS+ ++
Sbjct: 514 EEMIKAGFTPCV-----TTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLN 568
Query: 186 IMCKSGKPWKAVKL-----------------------------------YKEMKKKGIKM 210
K G K+ ++E K G K
Sbjct: 569 CYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKP 628
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
D+V +N+++ ++ D A + R +RE G QP +VT N+++ + G + +L
Sbjct: 629 DLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEIL 688
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
+ K G PD+++Y+ + + +E + M SGIRP + TY + +
Sbjct: 689 KGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGK 748
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
G V V M + C P+E Y +VD +KY E M
Sbjct: 749 GMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCK------GKKYKEAM 790
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 150/358 (41%), Gaps = 23/358 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +VI+ GK + D + + +MK++ +PN T+ + + E +
Sbjct: 387 TYTTVINAYGKAGKEDKALSFFRQMKES-GCVPNVCTYNAILGMLGKKSRLEEMIDMLCD 445
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ G N + A+C K + + F E K+ GF E N+ +N ++ +
Sbjct: 446 MRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGF----EPNR-DTFNALIGAY 500
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
+ + +EEM K G + +Y+ ++ + + G A + +MK KG K +
Sbjct: 501 GRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNE 560
Query: 213 VAYNTVIRAV---GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
+Y+ ++ G G++ ++ E+ PS + T++ + +
Sbjct: 561 TSYSLMLNCYAKGGNGRGIE---KIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERA 617
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDR-------MIESGIRPKMDTYVMLLR 322
E K G PD++ ++ K + ++DR + ESG++P + TY L+
Sbjct: 618 FQEFCKHGYKPDLVLFNSMLSIFAKNK----MYDRAHEMLRLIRESGLQPDLVTYNSLMD 673
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ R G + K +++ G PD +YN ++ +G++ A + EM G+
Sbjct: 674 MYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGI 731
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 4/199 (2%)
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
I+ + + A++L E+ + +DV A+ T++ A + A+ ++ +MR+ G P
Sbjct: 183 ILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSP 242
Query: 246 SVVTCNTVIKLLCENGRV-REAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGL 301
++VT N ++ + + GR + +L EM G D T + E
Sbjct: 243 TLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKF 302
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
F R+ G TY LL+ FG+ G + K+ME+ C PD YN LV A +
Sbjct: 303 FARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVR 362
Query: 362 KGMLDMARKYDEEMFAKGL 380
G + + + M KG+
Sbjct: 363 AGFHEEGADFIDTMIRKGI 381
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 153/383 (39%), Gaps = 47/383 (12%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A +FF ++++ + T TYNS++ + GK + + +++ M+ N + P+ T+ +
Sbjct: 299 ARKFFARLKSEGYVAGTF-TYNSLLQVFGKAGIYSEALSILKEMEKN-NCPPDLVTYNEL 356
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
YV A E + + G + + ++Y +++A K E + L F + +
Sbjct: 357 VAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYG--KAGKEDKALSFF--RQMK 412
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
SG V T YN IL K S + + +M G + +++ + + G
Sbjct: 413 ESGCVPNVCT--YNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGM 470
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
++++EMK G + + +N +I A G +++Y EM + G P V T N
Sbjct: 471 HKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNA 530
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP----------------- 295
++ L G A +V+ +M KG P+ +Y C K
Sbjct: 531 LLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGH 590
Query: 296 ------------------REILGL---FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
R ++G+ F + G +P + + +L F +
Sbjct: 591 IFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAH 650
Query: 335 VVWKKMEELGCSPDEFAYNALVD 357
+ + + E G PD YN+L+D
Sbjct: 651 EMLRLIRESGLQPDLVTYNSLMD 673
>gi|255562047|ref|XP_002522032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538836|gb|EEF40436.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 451
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 172/365 (47%), Gaps = 13/365 (3%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKD-NPSSIPNHATFRI 72
+L FFNW + ++T T+ Y +I IL K + W LI +MKD NP + T R
Sbjct: 87 SLRFFNW--SRAYYTPTSIEYEELIKILAKSKRYSSMWKLITQMKDQNPQFSISSETVRS 144
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNV 131
+ + Y + L+++A+ FN+ + + V Y +L+ ALCE K A L + +
Sbjct: 145 IIEEYGRSGLIDQAVEVFNQCNSLNCEQNVDIYNSLLFALCEVKLFHGAYALV----RRL 200
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
GL NKT Y++++ GW + + + F EEM K+G + + ++ + +G
Sbjct: 201 IRKGLAP-NKT-TYSVLVNGWCSNGKFKEAQLFLEEMSKKGFNPPVRGRDLLIEGLLNAG 258
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
A ++ +M K+G DV +N +I A+ S VDF + +Y +R++G P + +
Sbjct: 259 YFESAKEMVFKMSKEGFVPDVNTFNCLIEAICNSGEVDFCVDMYYSLRKLGFCPDINSYK 318
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIES 308
+I + + G++ EA+ +L + G P Y + + + + F M
Sbjct: 319 ILIPAVSKVGKIDEAFKLLNNSIEDGHKPFPGLYAPIIKGMCRRGQFDDAFCFFGEMKVK 378
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G P Y ML+ GR G +M E+G +P ++ + D L + G D+A
Sbjct: 379 GHPPNRPVYTMLITMCGRGGKYVEAANYLVEMTEMGLTPISRCFDMVTDGLKNCGKHDLA 438
Query: 369 RKYDE 373
++ ++
Sbjct: 439 KRIEQ 443
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 176/391 (45%), Gaps = 54/391 (13%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
Y +V++ L K +++L+ R+ + S+ PN T+ I+ + +++ A N++
Sbjct: 181 YGTVMNGLCKKGHTQKAFDLL-RLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEM 239
Query: 94 DEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIYNMIL 149
+ + ++ +Y L+DALC+ L EN F ++ +N +N ++
Sbjct: 240 KQKSIPPDIFTYSTLIDALCK---------LSQWENVRTLFLEMIHLNIYPNVCTFNSVI 290
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G K E M ++GV D+ +Y++ +D G+ +A +++ M K I+
Sbjct: 291 DGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIE 350
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
D+++YN +I + +D AM+V RE+ + G +PS+VTCN ++ L E GR + A
Sbjct: 351 PDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNF 410
Query: 270 LAEMPKKGCVPDVITYHC-----------------FFRCLEKPRE----------ILGL- 301
EM G +PD+ T HC F LE+ RE I GL
Sbjct: 411 FDEMLSAGHIPDLYT-HCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLC 469
Query: 302 -----------FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF 350
F+++ G+ P + TY ++ + + G L + +KME+ GC D
Sbjct: 470 KNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNR 529
Query: 351 AYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
YN +V + + + + EE+ K S
Sbjct: 530 TYNVIVRGFLRSNKVSEMKAFLEEIAGKSFS 560
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 133/286 (46%), Gaps = 14/286 (4%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWG 159
+EV++ L+ L V +A L K + + E N+ +Y ++ G K
Sbjct: 141 NEVTFTTLIRGLFAENKVKDAVHLF----KKLVRENICEPNEV-MYGTVMNGLCKKGHTQ 195
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
K + M++ + +Y+I +D CK G A L EMK+K I D+ Y+T+I
Sbjct: 196 KAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLI 255
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
A+ + ++ EM + P+V T N+VI LC+ G+V +A ++ M +KG
Sbjct: 256 DALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVD 315
Query: 280 PDVITYHCFFRC------LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
PDVITY+ +++ REI FD MI I P + +Y +L+ + R +
Sbjct: 316 PDVITYNMIIDGYGLRGQVDRAREI---FDSMINKSIEPDIISYNILINGYARQKKIDEA 372
Query: 334 FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
V +++ + G P N L+ L + G A+ + +EM + G
Sbjct: 373 MQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAG 418
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 124/261 (47%), Gaps = 12/261 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+NSVID L K + + + ++ M + P+ T+ ++ Y V+ A F+
Sbjct: 285 TFNSVIDGLCKEGKVEDAEEIMRYMIEKGVD-PDVITYNMIIDGYGLRGQVDRAREIFDS 343
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY--NMIL 149
+ ++ D +SY L++ K + EA ++C + + GL K I N++L
Sbjct: 344 MINKSIEPDIISYNILINGYARQKKIDEAMQVC----REISQKGL----KPSIVTCNVLL 395
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G F++ + F++EM G + DL+++ + K+G +A+ + +++++
Sbjct: 396 HGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRRED 455
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
++ Y VI + + +D A + ++ +G P V+T +I C+ G + EA +
Sbjct: 456 TNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDM 515
Query: 270 LAEMPKKGCVPDVITYHCFFR 290
L +M GC+ D TY+ R
Sbjct: 516 LRKMEDNGCLADNRTYNVIVR 536
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 8/246 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN +ID G + D + + M N S P+ ++ I+ Y ++EAM +
Sbjct: 320 TYNMIIDGYGLRGQVDRAREIFDSMI-NKSIEPDIISYNILINGYARQKKIDEAMQVCRE 378
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + GLK + CN L+ L E AQ F E + G + + +L G
Sbjct: 379 ISQKGLKPSIVTCNVLLHGLFELGRTKSAQNF-FDEMLSAG-----HIPDLYTHCTLLGG 432
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+FK + + ++++R ++ Y+ +D +CK+GK KA ++++ G+ D
Sbjct: 433 YFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPD 492
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V+ Y +I +D A + R+M + GC T N +++ + +V E A L
Sbjct: 493 VITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLE 552
Query: 272 EMPKKG 277
E+ K
Sbjct: 553 EIAGKS 558
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 83/189 (43%), Gaps = 4/189 (2%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A L+++M + V +++ +++A+ + + ++RE+ ++ + V+
Sbjct: 56 AFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVN 115
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGI-R 311
C R ++VLA KKG + +T+ R L K ++ + LF +++ I
Sbjct: 116 SCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICE 175
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
P Y ++ + G + F + + ME+ P+ Y ++DA GMLD A
Sbjct: 176 PNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSL 235
Query: 372 DEEMFAKGL 380
EM K +
Sbjct: 236 LNEMKQKSI 244
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Query: 83 VNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
+++A TF KL GL D ++Y ++ C+ + EA+++ N G + N+
Sbjct: 474 LDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDN----GCLADNR 529
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
T YN+I+RG+ + + + + F EE+ + + + + MDI+ +
Sbjct: 530 T--YNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAE 575
>gi|255561437|ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539120|gb|EEF40716.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 629
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 162/379 (42%), Gaps = 53/379 (13%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
N +AL+ F W FTH+ TY ++I L F FD + L+ M S P+
Sbjct: 50 NSATKALQTFKWASNLPKFTHSQSTYRALIQKLCAFHRFDTVYQLLDEMPHAIGSPPDEE 109
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELC--FG 126
F + + A ++ HVI+ +L FG
Sbjct: 110 IFLTVIRGLGRARMI-------------------------------PHVIKVLDLISKFG 138
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFW-EEMDKRGVVKDLHSYSIYMD 185
+N ++ KI+N IL K+ REF+ ++M GV D ++++I M
Sbjct: 139 KNPSL-----------KIFNSILDVLVKVD-IDVAREFYRKQMMGSGVQGDDYTFAILMK 186
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
+C + + +L + MK +G+K + V YNT++ A+ + V A + E+ E P
Sbjct: 187 GLCLTNRIGDGFRLLQVMKSRGVKPNAVVYNTLLHALCKNGKVGRARSLMDEIEE----P 242
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLF 302
+ VT N +I C+ + +A +L + G VPDV+T L + E + +
Sbjct: 243 NDVTFNVLIAAYCKEENLVQALVLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEML 302
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
+R+ G + Y LLR F R G ++ K+ME GC P+ YN L+ D
Sbjct: 303 ERVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLPNVETYNILISGFCDS 362
Query: 363 GMLDMARKYDEEMFAKGLS 381
GM DMA +M G+S
Sbjct: 363 GMFDMALDMFNDMKTDGIS 381
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 162/389 (41%), Gaps = 52/389 (13%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
YN+++ L K + + +L+ +++ PN TF ++ Y + +A+ K
Sbjct: 215 VYNTLLHALCKNGKVGRARSLMDEIEE-----PNDVTFNVLIAAYCKEENLVQALVLLEK 269
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGF-SGLVEMNKTKIYNMILR 150
G + D V+ +V+ LC V EA E+ + V + GLV++ YN +LR
Sbjct: 270 SFSLGFVPDVVTMTKVVEILCNAGRVTEAVEML----ERVEYKGGLVDVVA---YNTLLR 322
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
G+ ++ F +EM+++G + ++ +Y+I + C SG A+ ++ +MK GI
Sbjct: 323 GFCRLGKIKVAHRFLKEMERKGCLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISW 382
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREM--GCQPSVVTCNTVIKLL----------- 257
+ Y+T+I+ + ++ +++ M E G + N+V+ L
Sbjct: 383 NFDTYDTLIKGLFFGGRIEEGLKILELMEESKGGSGGRISPYNSVLYGLYKKNMWDEALE 442
Query: 258 ----------------------CENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE 293
CE G V+ A V +M +G P+++ Y C C E
Sbjct: 443 FLMKMEKLFPRAVDRSLRILGFCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFCQE 502
Query: 294 -KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
RE L + M+ G + L+ F G + M GC PD Y
Sbjct: 503 GNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDESALKLLDDMVGRGCVPDRGTY 562
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ L+DAL KG A +M KG++
Sbjct: 563 SPLIDALCRKGNFQKALSIFNQMIEKGIT 591
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 73/357 (20%), Positives = 138/357 (38%), Gaps = 51/357 (14%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A A+E VE YN+++ + + ++ + M + +P
Sbjct: 290 CNAGRVTEAVEMLERVEYKGGLVDVV-AYNTLLRGFCRLGKIKVAHRFLKEM-ERKGCLP 347
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N T+ I+ + + + + A+ FN + G+ + +Y L+ L + E ++
Sbjct: 348 NVETYNILISGFCDSGMFDMALDMFNDMKTDGISWNFDTYDTLIKGLFFGGRIEEGLKIL 407
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
++ G SG + YN +L G +K + W + EF +M+K
Sbjct: 408 ELMEESKGGSG----GRISPYNSVLYGLYKKNMWDEALEFLMKMEK-------------- 449
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE--GVDFAMRVYREMREMG 242
L+ A + +R +G E V A V+ +M G
Sbjct: 450 --------------LFPR-----------AVDRSLRILGFCEKGAVKNAKMVFDQMINEG 484
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREIL 299
P+++ + ++ C+ G +REA+ ++ EM G ++ C + K L
Sbjct: 485 GTPNILVYDCLVHGFCQEGNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDESAL 544
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
L D M+ G P TY L+ R G + ++ +M E G +PD +N+L+
Sbjct: 545 KLLDDMVGRGCVPDRGTYSPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLL 601
>gi|357440039|ref|XP_003590297.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479345|gb|AES60548.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 661
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 189/427 (44%), Gaps = 39/427 (9%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
Y +DWK AL F W + +F H+ +Y+ ++DILG+ D ++ M+ S+
Sbjct: 96 YKDDWKSALAIFRWAGSHSNFKHSQQSYDMMVDILGRMKAMDKMREILEEMRQ--ESLIT 153
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCF 125
T + +R+V A +A+ F+ L GL+ N L+D LC+ K V +A+E+
Sbjct: 154 LNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIYL 213
Query: 126 ---------GENKNVGFSGLVEMNKTK-------------------IYNMILRGWFKMSW 157
N+ G + + + Y+ I++ + +
Sbjct: 214 ELKHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQN 273
Query: 158 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
+ + + +EM + ++ +Y+ M + K+ K +A+++ + M G + D + +N+
Sbjct: 274 FDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNS 333
Query: 218 VIRAVGVSEGVDFAMRVYR-EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
+I +G + +D A V++ M + P+ T N++I + C + A+ +L EM K
Sbjct: 334 LIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKS 393
Query: 277 G-CVPDVITYHCFFRCLEKPREILG-----LFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
G C PD+ TYH + K REI L D + + I + TY +L+ R
Sbjct: 394 GLCKPDIQTYHPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLIHGLYRADRC 453
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM-LDMARKYDEEMFAKGLSAKPREELG 389
+ F ++++M + P L+D + K M L + + D G+S KP +
Sbjct: 454 KWAFDLFEEMADQDIVPRYKTCRLLLDEVKQKNMHLAVVKIEDRNTGVMGISMKPENKKN 513
Query: 390 TKLVQGG 396
+ ++ G
Sbjct: 514 DEGLKSG 520
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 162/350 (46%), Gaps = 11/350 (3%)
Query: 15 LEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
++FF W HF H + TY ++I L + D W I M +P S+ A + +
Sbjct: 108 IQFFKWAGKRQHFQHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSV-GPAEWSEIL 166
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNVGF 133
K A +VN+A+ F ++ + Y L+ L H + EL + E + G
Sbjct: 167 KILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHEL-YNEICSEGN 225
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
T Y+ ++ + K+ + ++EM + G+ Y+ + + K K
Sbjct: 226 CS----PDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKV 281
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
A++L +EMK KG V Y +I+ +G VD A ++ M + GC+P VV N +
Sbjct: 282 EAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNL 341
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGL-FDRMIESG 309
I +L GR+ +A + +M C P+V+TY+ + + + P L F++M +G
Sbjct: 342 INILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANG 401
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
I P TY +L+ F + + ++ ++M+E G P AY +L+D+L
Sbjct: 402 IAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSL 451
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 176/399 (44%), Gaps = 35/399 (8%)
Query: 16 EFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFK 75
E +N + ++ + + T TY+++I GK +D ++ L MK+N P + +
Sbjct: 215 ELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLH-PTEKIYTTILA 273
Query: 76 RYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKN---- 130
Y + V A+ ++ G V +Y L+ L + V +A L F K+
Sbjct: 274 MYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKP 333
Query: 131 -----------VGFSGLVE--------MNKTK------IYNMILRGWFKMSWWGKCREFW 165
+G +G +E M+ + YN +++ F+ W
Sbjct: 334 DVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALW 393
Query: 166 -EEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGV 224
E+M G+ +Y+I +D CK+ + KA+ L +EM +KG AY ++I ++G
Sbjct: 394 FEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGR 453
Query: 225 SEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
++ + A +++E++E + S +IK GR+ +A + EM K GC PDV T
Sbjct: 454 AKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYT 513
Query: 285 YHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKME 341
Y+ + + E L M E+G P + ++ ++L + G + ++ KM+
Sbjct: 514 YNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMK 573
Query: 342 ELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
E PD +YN ++ L GM +MA K EM KG
Sbjct: 574 ESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGF 612
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 123/270 (45%), Gaps = 15/270 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNL----IHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
TYN+VI + FE + +MK N + P+ T+ I+ + + V +A+
Sbjct: 372 TYNTVIKAI---FESKAPASEAALWFEKMKANGIA-PSSFTYAILIDGFCKTNRVEKALL 427
Query: 89 TFNKLDEFGLKD-EVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
++DE G +YC+L+D+L K A EL +N G S ++Y +
Sbjct: 428 LLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSS------ARVYAV 481
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
+++ + + + EM K G D+++Y+ M M ++G +A L + M++ G
Sbjct: 482 MIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENG 541
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
D+ ++N ++ + + G A+ ++ +M+E P V+ NT++ L G A
Sbjct: 542 CTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAA 601
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
++ EM KG D ITY + K E
Sbjct: 602 KLMREMKLKGFEYDSITYSSILEAVGKVDE 631
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 98/216 (45%), Gaps = 13/216 (6%)
Query: 157 WWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
W GK + F D +Y + + +SG + + ++M + + ++
Sbjct: 113 WAGKRQHFQH---------DSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWS 163
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
+++ +G ++ V+ A+ V+ +++ C P+ NT+I +L G + + + E+ +
Sbjct: 164 EILKILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSE 223
Query: 277 G-CVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
G C PD ITY F LE+ LFD M E+G+ P Y +L + + +
Sbjct: 224 GNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEA 283
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
+ ++M+ GC+P F Y L+ L G +D A
Sbjct: 284 ALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDA 319
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 6/196 (3%)
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
K++ + D Y +IR + S VD R ++M C + ++K+L + V
Sbjct: 116 KRQHFQHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMV 175
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESG-IRPKMDTYVM 319
+A +V ++ + C P Y+ L +I L++ + G P TY
Sbjct: 176 NKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSA 235
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L+ FG+ F ++ +M+E G P E Y ++ ++ A + EEM KG
Sbjct: 236 LISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKG 295
Query: 380 LSAKPREELGTKLVQG 395
+ P T+L++G
Sbjct: 296 CA--PTVFTYTELIKG 309
>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
Length = 454
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 159/384 (41%), Gaps = 46/384 (11%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+Y ++ L + + D + + I M +P+ T+ ++ A ++ A+ F
Sbjct: 12 SYCYLVKALCRTGKIDKACSTIAEMARE-KLVPDVFTYNVVIDTLCKARRISRAIEFFET 70
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ E D V+Y L+ LC+ V +A L FG + G + Y ++ +
Sbjct: 71 MPE---PDVVTYNTLLGGLCKNGRVAQACSL-FGSMEGAGIT-----PSDVTYTTLIDVF 121
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
KM + + M R ++SY ++ +CK+ K +A +L++EMK G K D
Sbjct: 122 CKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDR 181
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V YNT+I + V + + A + M E QP +T +I+ LC R++EA+ +
Sbjct: 182 VTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQG 241
Query: 273 MPKKGCVPDVIT---------------------------------YHCFFRCLEKPR--- 296
M K+GC PD++T Y FR L + R
Sbjct: 242 MAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFD 301
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
L +M G+ P + TY + G W + +++M E G PD AYN LV
Sbjct: 302 RAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLV 361
Query: 357 DALIDKGMLDMARKYDEEMFAKGL 380
D LDMA K M GL
Sbjct: 362 DGFCKANRLDMAEKMVRYMDQSGL 385
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 124/269 (46%), Gaps = 25/269 (9%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI------YNMILRGWF 153
+ +SYC LV ALC + +A S + EM + K+ YN+++
Sbjct: 9 NALSYCYLVKALCRTGKIDKA------------CSTIAEMAREKLVPDVFTYNVVIDTLC 56
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
K + EF+E M + VV +Y+ + +CK+G+ +A L+ M+ GI V
Sbjct: 57 KARRISRAIEFFETMPEPDVV----TYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDV 112
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
Y T+I + A + + M C P+V + ++I LC+N +V +AY + EM
Sbjct: 113 TYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEM 172
Query: 274 PKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
GC PD +TY+ L ++ E L M+E+ +P T+ L+ +
Sbjct: 173 KLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRI 232
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ FV+++ M + GC+PD + LV L
Sbjct: 233 KEAFVLFQGMAKQGCAPDLVTHTVLVSKL 261
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 159/386 (41%), Gaps = 30/386 (7%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C +A F +E T + TY ++ID+ K +F+ ++ L+ M S P
Sbjct: 87 CKNGRVAQACSLFGSME-GAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCS-P 144
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL- 123
++ + V++A F ++ G K D V+Y L+ LC + + EA++L
Sbjct: 145 TVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLL 204
Query: 124 ------CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
F +K + F+ L+E G + ++ M K+G DL
Sbjct: 205 TVMVENSFQPDK-ITFTALIE------------GLCTTDRIKEAFVLFQGMAKQGCAPDL 251
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
++++ + +C K A+ + + V+ Y + R +G G D A R+ ++
Sbjct: 252 VTHTVLVSKLCIRRKLRPALSVVRNYP--ACPEAVILYTPIFRELGRRRGFDRAARLLQK 309
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
M G P+VVT K L + AY M ++G PD++ Y+ K
Sbjct: 310 MARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANR 369
Query: 298 ILGLFDRMI----ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
L + ++M+ +SG+ P + TY L+ R G + + + M G PD ++
Sbjct: 370 -LDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWS 428
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKG 379
LV L G +D A + ++G
Sbjct: 429 TLVAGLFRVGQVDAAYSFLNLAMSQG 454
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 9/220 (4%)
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
SY + +C++GK KA EM ++ + DV YN VI + + + A+ + M
Sbjct: 12 SYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETM 71
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI 298
E P VVT NT++ LC+NGRV +A ++ M G P +TY K +
Sbjct: 72 PE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQF 127
Query: 299 ---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
GL M P + +Y ++ + + + ++++M+ GC PD YN L
Sbjct: 128 ETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTL 187
Query: 356 VDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+ L K L A+ M S +P + T L++G
Sbjct: 188 IHGLCVKQRLHEAKDLLTVMVEN--SFQPDKITFTALIEG 225
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 82/190 (43%), Gaps = 9/190 (4%)
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
K + ++Y +++A+ + +D A EM P V T N VI LC+ R+ A
Sbjct: 7 KPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIE 66
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFG 325
MP+ PDV+TY+ L K + LF M +GI P TY L+ F
Sbjct: 67 FFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFC 122
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
+ + + + M CSP ++Y ++++ L +D A + EEM G KP
Sbjct: 123 KMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAG--CKPD 180
Query: 386 EELGTKLVQG 395
L+ G
Sbjct: 181 RVTYNTLIHG 190
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 167/353 (47%), Gaps = 17/353 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS+ID L K D + ++ M D +P+ T+ IM + Y + + EA+ K
Sbjct: 237 TYNSLIDGLCKAQAMDKAVAILQHMFDK-GVMPDTRTYNIMIRGYCSLGQLEEAVRLLKK 295
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK---TKIYNMI 148
+ GL+ D V+Y L+ C+ EA+ + F +V + + IY+++
Sbjct: 296 MSGSGLQPDVVTYSLLIQYYCKIGRCAEARSV---------FDSMVRKGQKPNSTIYHIL 346
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
L G+ R+ + M + G+ + +++I + K G KA+ + EM++ G+
Sbjct: 347 LHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGL 406
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ DVV+Y+TVI + + V+ A+ + +M G P++++ ++I LC G ++
Sbjct: 407 RPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEE 466
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFG 325
+ EM +G PD I + L K ++ FD +I G++P + +Y L+ +
Sbjct: 467 LAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYC 526
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
G + +M +G PD + YN+L++ G ++ A EMF K
Sbjct: 527 FVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRK 579
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 155/335 (46%), Gaps = 10/335 (2%)
Query: 66 NHATFRIMFKRYVTAHLVNEAMG-TFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
+ T + K + ++AM F ++ E G +V SY L+ LC K EA EL
Sbjct: 125 QNVTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALEL 184
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ G++ + YN ++ G+FK K + EM +G+ D+ +Y+
Sbjct: 185 LIHMTADGGYNCSPNVVS---YNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSL 241
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D +CK+ KAV + + M KG+ D YN +IR ++ A+R+ ++M G
Sbjct: 242 IDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGL 301
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL---G 300
QP VVT + +I+ C+ GR EA +V M +KG P+ YH ++
Sbjct: 302 QPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRD 361
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L D MI GI + + +L+ + + G + + +M + G PD +Y+ ++ L
Sbjct: 362 LLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILC 421
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
G ++ A + +M ++GLS P T L+ G
Sbjct: 422 KTGRVEDAVYHFNQMVSEGLS--PNIISFTSLIHG 454
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 167/384 (43%), Gaps = 19/384 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTD--TYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
C + ALE + D + + + +YN+VID K E D ++ L H M
Sbjct: 173 CVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLP 232
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKL-DEFGLKDEVSYCNLVDALCEYKHVIEAQE 122
P+ T+ + A +++A+ + D+ + D +Y ++ C + EA
Sbjct: 233 -PDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVR 291
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L K + SGL Y+++++ + K+ + R ++ M ++G + Y I
Sbjct: 292 LL----KKMSGSGL--QPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHI 345
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ G L M + GI + A+N +I A VD AM + EMR+ G
Sbjct: 346 LLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNG 405
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE---IL 299
+P VV+ +TVI +LC+ GRV +A +M +G P++I++ L E +
Sbjct: 406 LRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVE 465
Query: 300 GLFDRMIESGIRPK---MDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
L MI GI P M+T + L K GR + F + +G PD +YN L+
Sbjct: 466 ELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFF---DMVIHIGVKPDVVSYNTLI 522
Query: 357 DALIDKGMLDMARKYDEEMFAKGL 380
D G +D + K + M + GL
Sbjct: 523 DGYCFVGKMDESIKQLDRMVSIGL 546
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 148/327 (45%), Gaps = 23/327 (7%)
Query: 64 IP-NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA- 120
IP H F I+ Y V++AM F ++ + GL+ D VSY ++ LC+ V +A
Sbjct: 371 IPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAV 430
Query: 121 ----QELCFGENKNV-GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVK 175
Q + G + N+ F+ L+ G + W K E EM RG+
Sbjct: 431 YHFNQMVSEGLSPNIISFTSLIH------------GLCSIGEWKKVEELAFEMINRGIHP 478
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
D + MD +CK G+ +A + + G+K DVV+YNT+I +D +++
Sbjct: 479 DAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQL 538
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP 295
M +G +P T N+++ +NGRV +A A+ EM +K IT + L +
Sbjct: 539 DRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQA 598
Query: 296 REILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
I+ L+ +M++ G + +++TY +L + +++ + D +
Sbjct: 599 GRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTF 658
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKG 379
+ +++AL+ G +D A+ M +G
Sbjct: 659 SIVINALLKVGRIDEAKSLFSAMVLRG 685
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 165/363 (45%), Gaps = 35/363 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+Y++VI IL K + + ++M S PN +F + + +G + K
Sbjct: 412 SYSTVIHILCKTGRVEDAVYHFNQMVSEGLS-PNIISFTSLIHGLCS-------IGEWKK 463
Query: 93 LDEFGLK--------DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI 144
++E + D + ++D LC+ V+EAQ+ F ++G V
Sbjct: 464 VEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDF-FDMVIHIGVKPDVVS----- 517
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKR---GVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
YN ++ G+ + GK E +++D+ G+ D +Y+ ++ K+G+ A+ LY+
Sbjct: 518 YNTLIDGY---CFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYR 574
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
EM +K +K + N ++ + + + A +Y +M + G Q + T NTV+ LCEN
Sbjct: 575 EMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENS 634
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYV 318
V EA + ++ K DV T+ L K E LF M+ G P + TY
Sbjct: 635 CVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYS 694
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY----DEE 374
++++ G L ++ ME+ GC+ D N +V L++KG + A Y DE+
Sbjct: 695 LMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEK 754
Query: 375 MFA 377
F+
Sbjct: 755 NFS 757
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 90/239 (37%), Gaps = 49/239 (20%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG-------VDFAMRVYREMREMGCQPSVV 248
A+ L+ E+ + V A+N+V+ V ++ A+ ++ M G
Sbjct: 33 ALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGVNMMAA 92
Query: 249 TCNTVIKLLCENGRVREAYA------------------------------------VLAE 272
+I+ C GR+ A+A V
Sbjct: 93 IIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRR 152
Query: 273 MPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESG---IRPKMDTYVMLLRKFGR 326
MP+ G PDV +Y+ + C+E K +E L L M G P + +Y ++ F +
Sbjct: 153 MPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFK 212
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
G + + ++ +M G PD YN+L+D L +D A + MF KG+ R
Sbjct: 213 EGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTR 271
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 165/359 (45%), Gaps = 20/359 (5%)
Query: 50 SWNLIHRMKDNPSSI--PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN- 106
S+N + M+ P + N + + K Y+T + F + G+ + N
Sbjct: 80 SFNRMLLMRPPPPTFHFDNILSSLVKNKHYLTV------ISLFKQFQSNGVTPNLCTLNI 133
Query: 107 LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE 166
L++ C H+ A + F G+ T I + G K + + F +
Sbjct: 134 LINCFCHLAHITFAFSV-FANILKRGYHPDAITLNTLIKGLCFCGEIKRALY-----FHD 187
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
++ +G D SY ++ +CK+G+ +L ++++ +K DVV Y T+I + ++
Sbjct: 188 KVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNK 247
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
V A +Y EM G P+V T NT+I C G ++EA+++L EM K PDV T++
Sbjct: 248 RVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFN 307
Query: 287 CFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
L K +I + LF+ M + P + TY L+ + L + KKM+E
Sbjct: 308 ILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQ 367
Query: 344 GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG--LSAKPREELGTKLVQGGLDGE 400
G PD ++Y L+DAL G L+ A+++ + + KG L+ + + L + GL G+
Sbjct: 368 GIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGD 426
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 154/365 (42%), Gaps = 38/365 (10%)
Query: 25 CHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVN 84
CH H T F F + N++ R P+ T + K +
Sbjct: 139 CHLAHIT-------------FAFSVFANILKR-----GYHPDAITLNTLIKGLCFCGEIK 180
Query: 85 EAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVG-----FSGLVE 138
A+ +K+ G + D+VSY L++ LC+ GE K V G
Sbjct: 181 RALYFHDKVVAQGFQLDQVSYGTLINGLCKA-----------GETKAVARLLRKLEGHSV 229
Query: 139 MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK 198
+Y I+ K G + + EM +G+ ++ +Y+ + C G +A
Sbjct: 230 KPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFS 289
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
L EMK K I DV +N +I A+G +D A+ ++ EM+ P++VT ++I LC
Sbjct: 290 LLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLC 349
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMD 315
+N + A A+ +M ++G PDV +Y L K + F ++ G +
Sbjct: 350 KNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVR 409
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
TY +++ + G V + KME GC PD + ++ AL +K D A K+ EM
Sbjct: 410 TYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREM 469
Query: 376 FAKGL 380
A+GL
Sbjct: 470 IARGL 474
>gi|225452658|ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Vitis vinifera]
gi|296087770|emb|CBI35026.3| unnamed protein product [Vitis vinifera]
Length = 675
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 178/395 (45%), Gaps = 21/395 (5%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
DW+R+L +W+ + ++ + YN VI + + +++L+ L M+ + P+ T
Sbjct: 134 DWQRSLALLDWINEEASYSPSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALA-PDRYT 192
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVD---ALCEYKHVIEAQELCF 125
+ + + + + A+ K+++ + D V Y NL++ LC+Y I F
Sbjct: 193 YSTLITHFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAIS----IF 248
Query: 126 GENKNVGFS-GLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
K G S LV YN ++ + K + + R EM GV+ D SYS +
Sbjct: 249 SRLKRSGISPDLVA------YNSMINVFGKAKLFREARLLLPEMRAGGVMPDTVSYSTLL 302
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ ++GK +A+ ++ EM + +D+ N +I G + A R++ MR+MG +
Sbjct: 303 SMYVENGKYVEALSVFSEMNEVRCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIE 362
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE---ILGL 301
P +V+ NT++++ E EA + M +K +V+TY+ + K E L
Sbjct: 363 PGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNL 422
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
M GI P TY ++ + + G L ++++K+ G D+ Y ++ A
Sbjct: 423 VQEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYER 482
Query: 362 KGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGG 396
G++ A++ E+ K PRE T L G
Sbjct: 483 AGLVAHAKRLLHEL--KRPDNIPRETAITILAGAG 515
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 163/380 (42%), Gaps = 40/380 (10%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D+ +A+ F+ ++ + YNS+I++ GK F + L+ M+ +P+ +
Sbjct: 240 DYSKAISIFSRLKRSG-ISPDLVAYNSMINVFGKAKLFREARLLLPEMRAG-GVMPDTVS 297
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGEN 128
+ + YV EA+ F++++E +++ CN ++D + EA L +
Sbjct: 298 YSTLLSMYVENGKYVEALSVFSEMNEVRCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMR 357
Query: 129 KNVGFSGLVEMN-----------------------------KTKIYNMILRGWFKMSWWG 159
K G+V N YN +++ + K
Sbjct: 358 KMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHE 417
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
K +EM RG+ + +YS + I K+GK +A L+++++ GI++D V Y T+I
Sbjct: 418 KATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGIEIDQVLYQTMI 477
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
A + V A R+ E++ +P + T I +L GR+ EA V + G V
Sbjct: 478 VAYERAGLVAHAKRLLHELK----RPDNIPRETAITILAGAGRIEEATWVFRQAFDAGEV 533
Query: 280 PDVITYHCFFRCLEKPRE---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVV 336
D+ + C + R+ ++ +FD+M +G P + ++L G+ +
Sbjct: 534 KDITVFGCMIDLFSRNRKHTNVIEVFDKMRGAGYFPDSNVIALVLNACGKLREFEKADAI 593
Query: 337 WKKMEELGCS-PDEFAYNAL 355
+K+MEE GC DE + L
Sbjct: 594 YKEMEEEGCVFSDEVHFQML 613
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 145/299 (48%), Gaps = 11/299 (3%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWG 159
D ++Y +++ +C+ V +A E F EN + G E N T YN++L+G F W
Sbjct: 15 DIITYNVVLNGICQEGRVDDAME--FLENLP-SYGG--EPN-TVSYNIVLKGLFTAERWE 68
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+ EEM +G ++ ++++ + +C+ G A+++ +++ K G + ++YN ++
Sbjct: 69 DAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLL 128
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
A + +D AM M GC P +V+ NT++ LC NG V A +L ++ KGC
Sbjct: 129 HAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCS 188
Query: 280 PDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVV 336
P +I+Y+ L K +E L L D MI G++P + TY + R +
Sbjct: 189 PVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRT 248
Query: 337 WKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+ K++++G P YNA++ L + A M + G P E T LV+G
Sbjct: 249 FCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNG--CMPNESTYTILVEG 305
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 115/222 (51%), Gaps = 3/222 (1%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+ +EM +G D+ +Y++ ++ +C+ G+ A++ + + G + + V+YN V++ +
Sbjct: 2 KLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGL 61
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
+E + A ++ EM GC P+VVT N +I LC G V A VL ++PK GC P+
Sbjct: 62 FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNS 121
Query: 283 ITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
++Y+ K +++ + + M+ G P + +Y LL R G + + +
Sbjct: 122 LSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQ 181
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
++ GCSP +YN ++D L G A + +EM +KGL
Sbjct: 182 LKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQ 223
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 197 VKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKL 256
+KL EM+ KG D++ YN V+ + VD AM + G +P+ V+ N V+K
Sbjct: 1 MKLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKG 60
Query: 257 LCENGRVREAYAVLAEMPKKGCVPDVITYHCF--FRC----LEKPREILGLFDRMIESGI 310
L R +A ++ EM KGC P+V+T++ F C +E E+L +++ + G
Sbjct: 61 LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVL---EQIPKYGC 117
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
P +Y LL F + + + M GC PD +YN L+ AL G +D+A
Sbjct: 118 TPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAID 177
Query: 371 YDEEMFAKGLS 381
++ KG S
Sbjct: 178 LLHQLKGKGCS 188
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 99/216 (45%), Gaps = 7/216 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
PN ++ + + +++AM + G D VSY L+ ALC V A +L
Sbjct: 119 PNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDL 178
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ K G S ++ YN ++ G K + E +EM +G+ D+ +Y+
Sbjct: 179 -LHQLKGKGCSPVLIS-----YNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTI 232
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+C+ K +A++ + +++ GI+ VV YN ++ + A+ ++ M GC
Sbjct: 233 ASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGC 292
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
P+ T +++ L G V+EA +L ++ +G V
Sbjct: 293 MPNESTYTILVEGLAYEGLVKEARDLLGQLCSRGVV 328
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 80/177 (45%), Gaps = 8/177 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+YN+++ L + E D++ +L+H++K S P ++ + A EA+ ++
Sbjct: 158 SYNTLLTALCRNGEVDVAIDLLHQLKGKGCS-PVLISYNTVIDGLTKAGKTKEALELLDE 216
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ GL+ D ++Y + LC + EA F + +++G V +YN IL G
Sbjct: 217 MISKGLQPDIITYTTIASGLCREDKIEEAIRT-FCKVQDMGIRPTV-----VLYNAILLG 270
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
K + + M G + + +Y+I ++ + G +A L ++ +G+
Sbjct: 271 LCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQLCSRGV 327
>gi|147789025|emb|CAN75780.1| hypothetical protein VITISV_012424 [Vitis vinifera]
Length = 515
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 169/386 (43%), Gaps = 21/386 (5%)
Query: 4 LSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
+ ++N +K A EFF + F ++D + + IL + FD +W L+ ++ S
Sbjct: 86 FAAHSNGFK-AFEFFKFSLQHSEFCPSSDAFEKTLHILTRMRYFDKAWELMEEIQQTHPS 144
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLD-------EFGLKDEVSYCNLVDALCEYKH 116
+ + IM R + + F +++ EFG + + L+ A C +
Sbjct: 145 LLTLKSMSIMLSRIAKFQSYEDTLEAFGRMEKNVFFGREFGANE---FNVLLRAFCTQRQ 201
Query: 117 VIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
+ EA+ + + FS TK N++L G+ + F+ EM +RG +
Sbjct: 202 MKEARSVF--HKMHSRFSP-----NTKTMNILLLGFKESGDVTAVELFYHEMIRRGFKPN 254
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
+Y+I +D CK G ++L +EM+K + T+I GV++ + A ++
Sbjct: 255 SVTYNIRIDAYCKKGCFGDGLRLLEEMEKANCPPTLETITTLIHGAGVAQNISRARELFN 314
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR 296
E+ QP + N + L + V+ A ++ EM ++G D +TYH FR L +
Sbjct: 315 EISIRNLQPDIGVYNAFMSSLIRSREVQSALMLMDEMEEEGIGHDSMTYHTMFRGLMRSN 374
Query: 297 EILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
I G L+ +MI PK T VML++ F + L +W + + G P A +
Sbjct: 375 GIEGVSELYHKMIRRNFVPKTRTIVMLMKWFCQNQQLDLSLDLWGYLIDRGYCPHGHALD 434
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKG 379
LV L G + A + ++ +G
Sbjct: 435 LLVTGLCSHGKVKEAVECAKQTLERG 460
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 171/373 (45%), Gaps = 13/373 (3%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F T YN ++ +L +F D ++ M D+ + PN T M Y V EA
Sbjct: 165 FKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVT-PNIFTLNTMVNGYCKLGNVVEA 223
Query: 87 MGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
+K+ + GL D +Y +L+ C K+V +A F N G + Y
Sbjct: 224 ELYVSKIVQAGLSLDTFTYTSLILGYCRNKNV-DAANAIFLSMPNKGC-----LRNEVSY 277
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
++ G+ + + + + +M + + +Y++ + +C+ G+ +A+ ++KEM +
Sbjct: 278 TNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTE 337
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
K + +V Y +I ++ D A ++ M E G PSVVT N +I C+ G
Sbjct: 338 KHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSAS 397
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLR 322
A +L+ M C P+ TY+ + + I + L +M+E ++P + TY +L+
Sbjct: 398 ALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIH 457
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ G L + + M E G PDE+ Y+ +D L +G+++ AR E + KG+
Sbjct: 458 GQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGI-- 515
Query: 383 KPREELGTKLVQG 395
K E + + L+ G
Sbjct: 516 KANEVIYSTLIDG 528
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 169/404 (41%), Gaps = 21/404 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A AL+ F+ + D + T TY +I L + + N+ M + P
Sbjct: 285 CEARRVDEALKLFSQMHEDNCWP-TVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQ-P 342
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQE-L 123
N T+ ++ ++A N + E GL V+Y L+D C+ A E L
Sbjct: 343 NVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEIL 402
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
E+ N + YN ++ G+ + K +M +R + ++ +Y+I
Sbjct: 403 SLMESNNCS-------PNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNIL 455
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ CK G A KL M + G+ D Y+ I + V+ A ++ ++E G
Sbjct: 456 IHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGI 515
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKP-REILG 300
+ + V +T+I C+ G+V + +L +M GCVP+ ITY+ C EK +E
Sbjct: 516 KANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARL 575
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L D MI+ I P DTY +L+ + ++ +M G PD F Y A + A
Sbjct: 576 LVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYC 635
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQ-----GGLDG 399
G L A +M AKG+ P L T + G +DG
Sbjct: 636 SHGRLKDAEVLICKMNAKGI--MPDTMLYTLFIDAYGRFGSIDG 677
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 177/424 (41%), Gaps = 47/424 (11%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
ALE + +E++ + + TYN +I + + +L+H+M + PN T+ I+
Sbjct: 398 ALEILSLMESN-NCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQ-PNVVTYNIL 455
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
+ A + ++E GL DE +Y +D LC+ V EA+ L F K G
Sbjct: 456 IHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSL-FESLKEKG 514
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
++ N+ IY+ ++ G+ K+ R ++M G V + +Y+ +D CK
Sbjct: 515 ----IKANEV-IYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKN 569
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
+A L M K+ I+ Y +I + + D A ++ +M G P V
Sbjct: 570 FKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTA 629
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESG 309
I C +GR+++A ++ +M KG +PD + Y F + I G+ RM E G
Sbjct: 630 FIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVG 689
Query: 310 IRPKMDTYVMLLRKFGR---------------------------WGFLRPVFV--VWKKM 340
P TY L++ W + F ++ KM
Sbjct: 690 CEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKM 749
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLV----QGG 396
E GC+P+ Y + L G L++A + + M KG S P E++ L+ Q G
Sbjct: 750 AEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQS--PNEDIYNSLLGCSCQLG 807
Query: 397 LDGE 400
L GE
Sbjct: 808 LYGE 811
>gi|414589415|tpg|DAA39986.1| TPA: empty pericarp 2 [Zea mays]
Length = 455
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 132/278 (47%), Gaps = 12/278 (4%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
+L FF + FTH D S++ + G L L + D P S + F ++
Sbjct: 100 SLRFFLFAAAMPGFTHLPD---SLLILAGSLAGARLFPLLRSLLSDLPRSALSRDLFPLL 156
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENK-NVG 132
F+ Y A L +A+ F+ ++ F V+ + + + ++E E F E+
Sbjct: 157 FRAYARAGLPEDAIRAFSSMERFCFLPTVADLHSLLFTLSHNGLVEHAEAFFRESPFQFD 216
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
S K Y +++ GW ++ K ++ ++EM +RGV D+ +Y+ +D +C+ G
Sbjct: 217 LSA-------KTYTILISGWAVVASPVKAQKLFDEMIERGVQPDVPAYNALIDALCRGGD 269
Query: 193 PWKAVKLYKEMKK-KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
A + K+M++ +G+ D Y +R+ S+ A+RV MR P+V T N
Sbjct: 270 VALAQEQLKDMQRSRGLAPDAATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFTYN 329
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF 289
VI+LLCE G V EAY +L EM G PDV +Y+
Sbjct: 330 AVIRLLCELGEVDEAYNILNEMATYGEKPDVWSYNTLL 367
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 87/242 (35%), Gaps = 44/242 (18%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDK---RGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
++ ++ R + + + M++ V DLHS + + +G A +
Sbjct: 152 LFPLLFRAYARAGLPEDAIRAFSSMERFCFLPTVADLHSL---LFTLSHNGLVEHAEAFF 208
Query: 201 KEMKKKGIKMDVVA--YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
+E + D+ A Y +I V A +++ EM E G QP V N +I LC
Sbjct: 209 RE---SPFQFDLSAKTYTILISGWAVVASPVKAQKLFDEMIERGVQPDVPAYNALIDALC 265
Query: 259 ENGRVREAYAVLAEMPK-KGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTY 317
G V A L +M + +G PD TY F R ++
Sbjct: 266 RGGDVALAQEQLKDMQRSRGLAPDAATYGPFLRSACASKDA------------------- 306
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
R V +M +P+ F YNA++ L + G +D A EM
Sbjct: 307 -------------RAALRVLDRMRARSLTPNVFTYNAVIRLLCELGEVDEAYNILNEMAT 353
Query: 378 KG 379
G
Sbjct: 354 YG 355
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 171/369 (46%), Gaps = 13/369 (3%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T TYN++I L D + ++ M +P+ T+ I+ + +A+
Sbjct: 152 TYTYNTLIRGLCGRGRTDNALAVLDDMLRR-GCVPDVVTYTILLEATCKRSGYKQAVKLL 210
Query: 91 NKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+++ + G D V+Y +V+ +C+ V +A E K++ G E N T YN++L
Sbjct: 211 DEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFL----KSLPSYG-CEPN-TVSYNIVL 264
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
+G W + EM ++G ++ ++++ + +C+ G A+++ ++ K G
Sbjct: 265 KGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCT 324
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
+ ++YN ++ A + +D AM M GC P +V+ NT++ LC G V A +
Sbjct: 325 PNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVEL 384
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
L ++ KGC P +I+Y+ L K E L L + M+ G++P + TY + R
Sbjct: 385 LHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCR 444
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPRE 386
G + + K++++G P+ YNA++ L + A M + G P E
Sbjct: 445 EGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNG--CMPNE 502
Query: 387 ELGTKLVQG 395
T L++G
Sbjct: 503 STYTILIEG 511
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 165/355 (46%), Gaps = 11/355 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +++ K + + L+ M+D P+ T+ ++ V++AM
Sbjct: 189 TYTILLEATCKRSGYKQAVKLLDEMRDK-GCAPDIVTYNVVVNGICQEGRVDDAMEFLKS 247
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
L +G + + VSY ++ LC + +A++L ++ +V +NM++
Sbjct: 248 LPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVV------TFNMLISF 301
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ E +++ K G + SY+ + CK K +A+ + M G D
Sbjct: 302 LCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPD 361
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+V+YNT++ A+ VD A+ + ++++ GC P +++ NTVI L + G+ EA +L
Sbjct: 362 IVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLN 421
Query: 272 EMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM KG PD+ITY C E + E + F ++ + GIRP Y +L +
Sbjct: 422 EMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRR 481
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAK 383
++ M GC P+E Y L++ L +G++ AR+ E+ ++G+ +K
Sbjct: 482 ATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVVSK 536
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 113/238 (47%), Gaps = 6/238 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G+ R M D ++Y+ + +C G+ A+ + +M
Sbjct: 123 YNAMVAGYCVTGQLDNARRLVAAMPME---PDTYTYNTLIRGLCGRGRTDNALAVLDDML 179
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
++G DVV Y ++ A G A+++ EMR+ GC P +VT N V+ +C+ GRV
Sbjct: 180 RRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVD 239
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLL 321
+A L +P GC P+ ++Y+ + L E+ + L M G P + T+ ML+
Sbjct: 240 DAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLI 299
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R G + P + ++ + GC+P+ +YN ++ A + +D A + E M + G
Sbjct: 300 SFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSG 357
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+C SG+ +A ++ + DV++YN ++ V+ +D A R+ + M +P
Sbjct: 100 LCASGRTAEARRVLASCEP-----DVMSYNAMVAGYCVTGQLDNARRL---VAAMPMEPD 151
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFD 303
T NT+I+ LC GR A AVL +M ++GCVPDV+TY K ++ + L D
Sbjct: 152 TYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLD 211
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
M + G P + TY +++ + G + K + GC P+ +YN ++ L
Sbjct: 212 EMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAE 271
Query: 364 MLDMARKYDEEMFAKG 379
+ A K EM KG
Sbjct: 272 RWEDAEKLMAEMSRKG 287
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 125/289 (43%), Gaps = 9/289 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A W+ A + + + T+N +I L + + + ++ ++ P
Sbjct: 268 CTAERWEDAEKLMAEMSRKGRPPNVV-TFNMLISFLCRRGLVEPAMEILDQIPKY-GCTP 325
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELC 124
N ++ + + ++ AM + G D VSY L+ ALC V A EL
Sbjct: 326 NSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVEL- 384
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+ K+ G + ++ YN ++ G K + E EM +G+ D+ +YS
Sbjct: 385 LHQLKDKGCTPVLIS-----YNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTIS 439
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+C+ G+ +A+K + +++ GI+ + V YN ++ + A+ ++ M GC
Sbjct: 440 SGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCM 499
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE 293
P+ T +I+ L G V+EA ++AE+ +G V + R L+
Sbjct: 500 PNESTYTILIEGLAYEGLVKEAREMMAELCSRGVVSKTLVNKGAIRLLD 548
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 92/238 (38%), Gaps = 43/238 (18%)
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
H Y + KP + + + A N +R + ++ A+R+
Sbjct: 22 HPYPSLPTPKTAAPKPRLNLAYAGAVAPNAVPHRSAASNDRLRVLVRRGDLEEAIRLVES 81
Query: 238 MREMGCQPSVV-TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------HCFFR 290
M G +PS C +IK LC +GR EA VLA C PDV++Y +C
Sbjct: 82 M--AGLEPSAAGPCAALIKKLCASGRTAEARRVLAS-----CEPDVMSYNAMVAGYCVTG 134
Query: 291 CLEKPREI-----------------------------LGLFDRMIESGIRPKMDTYVMLL 321
L+ R + L + D M+ G P + TY +LL
Sbjct: 135 QLDNARRLVAAMPMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILL 194
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ + + +M + GC+PD YN +V+ + +G +D A ++ + + + G
Sbjct: 195 EATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYG 252
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 163/375 (43%), Gaps = 54/375 (14%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQEL 123
P T+ I+ AH A+ F +L GL+ + N L++ CE K EA ++
Sbjct: 122 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 181
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVV--KDLHSYS 181
+G + Y+++L+ G+ + M + G V ++ +Y+
Sbjct: 182 LLHRTPELGC-----VPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYN 236
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF----------- 230
+D K G KA L+KEM ++GI D+V YN+V+ A+ + +D
Sbjct: 237 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK 296
Query: 231 ------------------------AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
A+RV++EMR P VVT + ++ LC+ G+++EA
Sbjct: 297 RVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 356
Query: 267 YAVLAEMPKKGCVPDVITYHCFFR------CLEKPREILGLFDRMIESGIRPKMDTYVML 320
V M KG PDV +Y+ CL ++ LFD M+ GI P T+ +L
Sbjct: 357 RDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLV---DMTDLFDLMLGDGIAPDFYTFNVL 413
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
++ + G L +++ +M + G PD Y ++ AL G +D A + +M +G+
Sbjct: 414 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 473
Query: 381 SAKPREELGTKLVQG 395
+ P + L+QG
Sbjct: 474 A--PDKYAYNCLIQG 486
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 169/396 (42%), Gaps = 62/396 (15%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNSV+ L K D + + +M N +PN+ T+ + Y + EA+ F +
Sbjct: 269 TYNSVVHALCKARAMDKAEAFLRQMV-NKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKE 327
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL-----CFGENKNVGFSGLVEMNKTKIYN 146
+ L D V+ L+ +LC+Y + EA+++ G+N +V FS YN
Sbjct: 328 MRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDV-FS----------YN 376
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++L G+ + ++ M G+ D +++++ + G KA+ ++ EM+
Sbjct: 377 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH 436
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS-------------------- 246
G+K DVV Y TVI A+ +D AM + +M + G P
Sbjct: 437 GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKA 496
Query: 247 ---------------VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------ 285
+V +++I LC+ GRV +A + G PD + Y
Sbjct: 497 KELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDG 556
Query: 286 HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
+C +EK L +FD M+ +GI P + Y L+ + + G + ++++M + G
Sbjct: 557 YCLVGKMEKA---LRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGI 613
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
P Y+ ++D L G A+ EM G++
Sbjct: 614 KPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIA 649
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 159/406 (39%), Gaps = 84/406 (20%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE- 122
PN + + + VN+A F ++ + G+ D V+Y ++V ALC+ + + +A+
Sbjct: 230 PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAF 289
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L NK V + YN ++ G+ W + ++EM + ++ D+ + S+
Sbjct: 290 LRQMVNKRV-------LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSM 342
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN-------------------------- 216
M +CK GK +A ++ M KG DV +YN
Sbjct: 343 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDG 402
Query: 217 ---------TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+I+A +D AM ++ EMR+ G +P VVT TVI LC G++ +A
Sbjct: 403 IAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM 462
Query: 268 AVLAEMPKKGCVPDVITYHCFFR------CLEKPREILG--------------------- 300
+M +G PD Y+C + L K +E++
Sbjct: 463 EKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 522
Query: 301 -----------LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE 349
+FD + G+ P Y ML+ + G + V+ M G P+
Sbjct: 523 CKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV 582
Query: 350 FAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
Y LV+ G +D EM +G+ KP L + ++ G
Sbjct: 583 VVYCTLVNGYCKIGRIDEGLSLFREMLQRGI--KPSTILYSIIIDG 626
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 139/299 (46%), Gaps = 10/299 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ TF ++ K Y ++++AM FN++ + G+K D V+Y ++ ALC + +A E
Sbjct: 405 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 464
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + + G + YN +++G+ K +E E+ G+ D+ +S
Sbjct: 465 -FNQMIDQGVAP-----DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSI 518
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
++ +CK G+ A ++ G+ D V Y+ ++ + ++ A+RV+ M G
Sbjct: 519 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 578
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGL-- 301
+P+VV T++ C+ GR+ E ++ EM ++G P I Y L + +
Sbjct: 579 EPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKM 638
Query: 302 -FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
F M ESGI + TY ++LR + ++K++ + + N ++D +
Sbjct: 639 KFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 697
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 159/366 (43%), Gaps = 38/366 (10%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +VI L + + D + ++M D + P+ + + + + T + +A ++
Sbjct: 444 TYRTVIAALCRIGKMDDAMEKFNQMIDQGVA-PDKYAYNCLIQGFCTHGSLLKAKELISE 502
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGF------------------ 133
+ G+ D V + ++++ LC+ V++AQ + F NVG
Sbjct: 503 IMNNGMHLDIVFFSSIINNLCKLGRVMDAQNI-FDLTVNVGLHPDAVVYSMLMDGYCLVG 561
Query: 134 -------------SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
S +E N +Y ++ G+ K+ + + EM +RG+ Y
Sbjct: 562 KMEKALRVFDAMVSAGIEPNVV-VYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILY 620
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
SI +D + ++G+ A + EM + GI MD+ YN V+R + + D A+ +++E+R
Sbjct: 621 SIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRA 680
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---RE 297
M + +++T NT+I + + RV EA + A + + VP+V+TY L K E
Sbjct: 681 MNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEE 740
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+F M +G P ++R+ + + K++E S + LVD
Sbjct: 741 AEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVD 800
Query: 358 ALIDKG 363
KG
Sbjct: 801 LFSSKG 806
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 159/356 (44%), Gaps = 13/356 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A ALE F + DC TY +++ L K +FD + ++ M + P
Sbjct: 55 CDAGRVVEALEHFRAMAKDC--APDVMTYTALVHALCKAGKFDEAQGMLREMIARGCA-P 111
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKD-EVSYCNLVDALCEYKHVIEAQELC 124
+ TF + +A + + G+ + + ++ ++ LC + +E
Sbjct: 112 DTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKV 171
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
G GF+ V M +N+++ G+ K + E M ++G V ++ +++I +
Sbjct: 172 LGVVIAKGFTPTVLM-----FNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILI 226
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+CK+ + +A +L ++M G +VV Y+TVI + VD A +++ M C
Sbjct: 227 TGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCP 286
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGL 301
P+VVT N +I LC+ R+ EA + M + GC PD+ITY+ L K E L
Sbjct: 287 PNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQL 346
Query: 302 FDRMIESGIR-PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
F + ESG+ TY L + G + ++ + + G SPD Y +L+
Sbjct: 347 FQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLI 402
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 170/391 (43%), Gaps = 50/391 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY++VI+ L K + D ++ L M + + PN T I+ A + EA +++
Sbjct: 256 TYSTVINGLCKQGQVDDAYELFQLM-ERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHR 314
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G D ++Y +L+D LC+ V EA +L + + SG+ N Y+ + G
Sbjct: 315 MRETGCAPDIITYNSLIDGLCKSFQVDEAFQL----FQTIPESGVSAANAVT-YSTLFHG 369
Query: 152 WFKMSWWG-KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPW---------------- 194
+ + CR F +DK G DL +Y+ + CK+ +
Sbjct: 370 YAALGRMADACRIFSMLVDK-GFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPP 428
Query: 195 -------------------KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
+A++L+ M +G D + YN V+ + + + A+ V
Sbjct: 429 RVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVL 488
Query: 236 REM---REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
++ R+ PS + +++ LC+ GR +A +L +M ++G V +Y+ L
Sbjct: 489 EQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGL 548
Query: 293 EKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE 349
+ + E +F+ M+ +G P++ T +++ + + + ++M +LGC PD
Sbjct: 549 SRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDI 608
Query: 350 FAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
N L+ G D+ARK EEM GL
Sbjct: 609 ETCNTLIGGYCKSGRADLARKLLEEMTEAGL 639
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 153/354 (43%), Gaps = 11/354 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +I + D++ L+ MK N N + K A V EA+ F
Sbjct: 11 TYGILIRGFSSAGDLDIAIQLLEEMKSNGFE-GNAVVHTTLMKGLCDAGRVVEALEHFRA 69
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ + D ++Y LV ALC+ EAQ G + + G T ++ ++ G
Sbjct: 70 MAKDCAPDVMTYTALVHALCKAGKFDEAQ----GMLREMIARGCAP--DTVTFSTLIDGL 123
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC-KSGKPWKAVKLYKEMKKKGIKMD 211
K + E++ +RG+ ++ + +C K A K+ + KG
Sbjct: 124 CKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPT 183
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V+ +N VI ++ +D A ++ M E GC P+V T +I LC+ RV EA +L
Sbjct: 184 VLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLE 243
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+M GC P+V+TY L K ++ LF M P + T+ +L+ +
Sbjct: 244 KMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAK 303
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ ++ +M E GC+PD YN+L+D L +D A + + + G+SA
Sbjct: 304 RIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSA 357
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 153/352 (43%), Gaps = 39/352 (11%)
Query: 6 CYANDWKRALEFFNWV-ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C A + A + ++ + ET C TYNS+ID L K F+ D ++ L + ++ S
Sbjct: 300 CKAKRIEEARQLYHRMRETGC--APDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSA 357
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
N T+ +F Y + +A F+ L + G D +Y +L+ C+ +E EL
Sbjct: 358 ANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVEL 417
Query: 124 C-------FGENKNV---GFSGLVEMNKTK-------------------IYNMILRGWFK 154
F N GL E N T+ IYN+++ G +
Sbjct: 418 VEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMAR 477
Query: 155 MSWWGKCREFWEE-MDKRGVVKDLHSYSI--YMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
S K E+ +DKR + S ++ ++ +C+ G+ A +L +M ++G
Sbjct: 478 ASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAA 537
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V +YN ++ + + D A +V+ M G P + T N VI LC +V +AY ++
Sbjct: 538 VSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQ 597
Query: 272 EMPKKGCVPDVITYHCFFRCLEKP-REILG--LFDRMIESGIRPKMDTYVML 320
M K GC PD+ T + K R L L + M E+G+ P T+ +L
Sbjct: 598 RMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649
>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
Length = 987
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 180/403 (44%), Gaps = 37/403 (9%)
Query: 14 ALEFFNWVETD-CHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
ALE F +E + CH TY S+I L + + + LI +M+++ + P +
Sbjct: 477 ALEVFKLMEHEGCH--PNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGIT-PGVIAYTT 533
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNV 131
+ + H + A F +++ GL DE +Y L DALC+ EA F K V
Sbjct: 534 LIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYS--FLVRKGV 591
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
+ + Y ++ G+ K E+M G DL++YS+ + +CK
Sbjct: 592 VLTKVT-------YTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQK 644
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV-DFAMRVYREMREMGCQPSVVTC 250
K +A+ + +M G+K ++VAY +I + + EG D A ++ EM G +PS T
Sbjct: 645 KLNEALSILDQMTVSGVKCNIVAYTIIISEM-IKEGKHDHAKSLFNEMISSGHKPSATTY 703
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR-C--LEKPREILGLFDRMIE 307
I C+ G++ EA ++ EM + G PDV+TYH F C + RM++
Sbjct: 704 TVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVD 763
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFV-------------VWKKMEEL---GCSPDEFA 351
+ P TY +LL+ F + + ++ VW+ +E + G +P
Sbjct: 764 ASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVT 823
Query: 352 YNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQ 394
Y++++ L+ A + M K +S P EE+ T L++
Sbjct: 824 YSSIIAGFCKATRLEEACVLLDHMLGKAIS--PNEEIYTMLIK 864
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 173/412 (41%), Gaps = 35/412 (8%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN--- 66
D AL FF WV F HT ++ +++ +L + L+ M + +
Sbjct: 65 DPATALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANYDKLVLSMISCSGTAEDVRE 124
Query: 67 -----HATFRIMFKRYVTA----HLVNEAMGTFNKLDEFG-----------LKDEVSYCN 106
A R+ KR V + +L ++ F+ + G L D V+Y
Sbjct: 125 AVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNT 184
Query: 107 LVDALCEYKHV-IEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFW 165
++ A C+ + I + C SG+ +M+ T N +L G+ + S K
Sbjct: 185 MIMAYCKKGSLAIAHRYFCLLRE-----SGM-QMD-TYTCNALLLGYCRTSDLRKACWLL 237
Query: 166 EEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVS 225
M G ++ +SY+I + + ++ +A+ L M + G +++ Y +I+ +
Sbjct: 238 MMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKE 297
Query: 226 EGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
+ A + EM G PSV T N +I C++GR+++A + A M + GC PD TY
Sbjct: 298 GRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTY 357
Query: 286 HCFFR--CLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
+ C K E L + I G P + T+ L+ + + + V M
Sbjct: 358 NSLIYGLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISS 417
Query: 344 GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
C D AY L++ LI K L A++ EMFA GL+ P + T ++ G
Sbjct: 418 NCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLA--PNVVIYTSIIDG 467
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 119/262 (45%), Gaps = 6/262 (2%)
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
K YN+ LR + + + + + G++ D +Y+ + CK G A + +
Sbjct: 145 KCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCL 204
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
+++ G++MD N ++ + + A + M MGC+ + + +I+ L E
Sbjct: 205 LRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARC 264
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVM 319
VREA ++ M + GC ++ Y + L K I GL D M G+ P + TY
Sbjct: 265 VREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNA 324
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++ + + G ++ + ME+ GC+PD++ YN+L+ L G LD A + A+G
Sbjct: 325 MIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARG 383
Query: 380 LSAKPREELGTKLVQGGLDGEQ 401
+ P T L+ G E+
Sbjct: 384 FT--PTVITFTNLINGYCKAER 403
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 150/349 (42%), Gaps = 9/349 (2%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++ID K + + M+ N + P+ T+ + L +EA N
Sbjct: 321 TYNAMIDGYCKSGRMKDALGIKALMEQNGCN-PDDWTYNSLIYGLCGGKL-DEAEELLNG 378
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
G V ++ NL++ C+ + + +A + K+ S +++ + Y +++
Sbjct: 379 AIARGFTPTVITFTNLINGYCKAERIDDALRV-----KSNMISSNCKLD-LQAYGVLINV 432
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + +E EM G+ ++ Y+ +D CK G A++++K M+ +G +
Sbjct: 433 LIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPN 492
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
Y ++I + + + AM + +M+E G P V+ T+I+ C+ A+ +
Sbjct: 493 AWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFE 552
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
M K G PD Y+ L K + ++ G+ TY L+ F + G
Sbjct: 553 MMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTD 612
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
V+ +KM GC D + Y+ L+ AL + L+ A ++M G+
Sbjct: 613 FAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGV 661
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 147/385 (38%), Gaps = 31/385 (8%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C +++ A F +E + T YN + D L K + +++ + R +
Sbjct: 539 CKKHEFDNAFRLFEMMEKN-GLTPDEQAYNVLTDALCKSGRAEEAYSFLVR----KGVVL 593
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
T+ + + A + A K+ G K D +Y L+ ALC+ K + EA +
Sbjct: 594 TKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSIL 653
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+ SG V+ N Y +I+ K + + EM G +Y++++
Sbjct: 654 ----DQMTVSG-VKCNIVA-YTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFI 707
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
CK G+ +A L EM++ G+ DVV Y+ I G +D A + M + C+
Sbjct: 708 SSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCE 767
Query: 245 PSVVTCNTVIKLLCENGRVREAY----------------AVLAEMPKKGCVPDVITYHCF 288
P+ T ++K + + Y +L M K G P V+TY
Sbjct: 768 PNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSI 827
Query: 289 FRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
K E L D M+ I P + Y ML++ M E G
Sbjct: 828 IAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGF 887
Query: 346 SPDEFAYNALVDALIDKGMLDMARK 370
P +Y+ L+ L D+G D A+
Sbjct: 888 QPQLESYHYLIVGLCDEGDYDRAKS 912
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 149/374 (39%), Gaps = 54/374 (14%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQEL 123
+P+ T+ M Y + A F L E G++ + CN + L Y + ++
Sbjct: 176 LPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNAL--LLGYCRTSDLRKA 233
Query: 124 CFGENKNVGFSGLVEMNKTKI-YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
C+ + L+ + + Y ++++G ++ + M + G +LH Y++
Sbjct: 234 CW----LLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTL 289
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ +CK G+ A L EM +G+ V YN +I S + A+ + M + G
Sbjct: 290 LIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNG 349
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF------------- 289
C P T N++I LC G++ EA +L +G P VIT+
Sbjct: 350 CNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDAL 408
Query: 290 ---------------------------RC-LEKPREILGLFDRMIESGIRPKMDTYVMLL 321
+C L++ +E L + M +G+ P + Y ++
Sbjct: 409 RVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETL---NEMFANGLAPNVVIYTSII 465
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ + G + V+K ME GC P+ + Y +L+ LI L A +M G++
Sbjct: 466 DGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGIT 525
Query: 382 AKPREELGTKLVQG 395
P T L+QG
Sbjct: 526 --PGVIAYTTLIQG 537
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 99/229 (43%), Gaps = 24/229 (10%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVN----EAMG 88
TY+ I+ G D +++ + RM D S PN T+ ++ K ++ L+N + G
Sbjct: 737 TYHIFINGCGHMGYMDRAFSTLKRMVD-ASCEPNCWTYWLLLKHFLKMSLINAHYIDTSG 795
Query: 89 TFN------------KLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSG 135
+N ++ + GL V +Y +++ C+ + EA C + +G +
Sbjct: 796 MWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEA---CVLLDHMLGKA- 851
Query: 136 LVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK 195
+ N+ +IY M+++ + +GK F +M + G L SY + +C G +
Sbjct: 852 -ISPNE-EIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDR 909
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
A L+ ++ + VA+ + + + VDF ++ M C+
Sbjct: 910 AKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCR 958
>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 122/239 (51%), Gaps = 3/239 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y+ ++ G+ + K + + M + GV D+ SY+I ++ CK A+ L++EM
Sbjct: 257 YSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMH 316
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+ I +VV YN++I + S + +A+++ EM + G P ++T ++++ LC+N
Sbjct: 317 CRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGD 376
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLL 321
+A A+L ++ +G P++ TY L K P + +F+ ++ G ++TY +++
Sbjct: 377 KAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMI 436
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
F G + KMEE GC P+ Y ++ +L DK D A K EM +GL
Sbjct: 437 HVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIIIRSLFDKDENDKAEKLLLEMITRGL 495
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 108/235 (45%), Gaps = 19/235 (8%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
PN T+ + Y VN+A FN + + G+ ++ SY L++ C+ K A L
Sbjct: 252 PNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMNL 311
Query: 124 CFGENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
EM+ KI YN ++ G K + +EM RG D+
Sbjct: 312 ------------FEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDI 359
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
+YS +D +CK+ KA+ L ++K +G++ ++ Y +I + + A ++ +
Sbjct: 360 ITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFED 419
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
+ G +V T +I + C NG EA A+L++M + GC+P+ +TY R L
Sbjct: 420 LLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIIIRSL 474
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 18/182 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS+ID L K + + L+ M D P+ T+ + H ++A+ K
Sbjct: 326 TYNSLIDGLCKSGKISYALKLVDEMHDR-GQPPDIITYSSLLDALCKNHPGDKAIALLTK 384
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQE-----LCFGENKNVGFSGLVEMNKTKIYN 146
L + GL+ + +Y L++ LC+ +AQ L G N NV Y
Sbjct: 385 LKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVKGYNINVN-----------TYT 433
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
+++ + +G+ +M++ G + + +Y I + + + KA KL EM +
Sbjct: 434 VMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIIIRSLFDKDENDKAEKLLLEMITR 493
Query: 207 GI 208
G+
Sbjct: 494 GL 495
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 171/353 (48%), Gaps = 11/353 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+NS+ID GK E D L+ M+ + + T+ + + + A G F
Sbjct: 225 TFNSLIDGYGKCGELDEVEQLVEEMRRSGCK-ADVVTYNALINCFCKFGRMETAYGYFAA 283
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G + + V++ VDA C+ V EA +L F + + G + +N+ Y ++ G
Sbjct: 284 MKREGVMANVVTFSTFVDAFCKEGLVREAMKL-FAQMRVRGMA----LNEFT-YTCLIDG 337
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K +EM ++GV ++ +Y++ +D +CK K +A + + M+K G++ +
Sbjct: 338 TCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRAN 397
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ Y T+I +++ + A+ + EM+ G + + +I+ LC ++ EA ++L
Sbjct: 398 ELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLT 457
Query: 272 EMPKKGCVPDVITYHCFF-RCLE--KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+M + G P+ I Y C + K E + + ++++SG +P + TY L+ + G
Sbjct: 458 KMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAG 517
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ + KM +LG P+ AY ALVD L G L+ A + EM KG+S
Sbjct: 518 SIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMS 570
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 164/354 (46%), Gaps = 15/354 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++I+ KF + ++ MK + N TF + LV EAM F +
Sbjct: 260 TYNALINCFCKFGRMETAYGYFAAMK-REGVMANVVTFSTFVDAFCKEGLVREAMKLFAQ 318
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G+ +E +Y L+D C+ + +A L E G V +N Y +++ G
Sbjct: 319 MRVRGMALNEFTYTCLIDGTCKAGRLDDAIVL-LDEMVRQG----VPLNVVT-YTVLVDG 372
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKD--LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
K + + M+K GV + L++ I+ M K+ + KA+ L EMK KG++
Sbjct: 373 LCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSE--KALGLLSEMKNKGLE 430
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
+D+ Y +I+ + +D A + +M E G +P+ + T++ ++G+V EA A+
Sbjct: 431 LDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAM 490
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGR 326
L ++ G P+VITY L K I + F++M + G+ P + Y L+ +
Sbjct: 491 LQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCK 550
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G L ++ +M G S D+ Y AL+D + +G L A +M GL
Sbjct: 551 NGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGL 604
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 116/257 (45%), Gaps = 9/257 (3%)
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
T+ N IL + R +E++ V +++I +D +CK G+ +A L+
Sbjct: 157 TRTCNHILLRLARDRSGRLVRRLFEQLPAPNVF----TFNIVIDFLCKEGELAEARSLFS 212
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
MK+ G DVV +N++I G +D ++ EMR GC+ VVT N +I C+ G
Sbjct: 213 RMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFG 272
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYV 318
R+ AY A M ++G + +V+T+ F K RE + LF +M G+ TY
Sbjct: 273 RMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYT 332
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
L+ + G L V+ +M G + Y LVD L + + A M
Sbjct: 333 CLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKA 392
Query: 379 GLSAKPREELGTKLVQG 395
G+ A E L T L+ G
Sbjct: 393 GVRAN--ELLYTTLIHG 407
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 169/404 (41%), Gaps = 52/404 (12%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T T N ++ L + D S L+ R+ + + PN TF I+ + EA F
Sbjct: 157 TRTCNHILLRLAR----DRSGRLVRRLFEQLPA-PNVFTFNIVIDFLCKEGELAEARSLF 211
Query: 91 NKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+++ E G L D V++ +L+D + + E ++L E + G V YN ++
Sbjct: 212 SRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL-VEEMRRSGCKADV-----VTYNALI 265
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
+ K ++ M + GV+ ++ ++S ++D CK G +A+KL+ +M+ +G+
Sbjct: 266 NCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMA 325
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE---- 265
++ Y +I + +D A+ + EM G +VVT ++ LC+ +V E
Sbjct: 326 LNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDV 385
Query: 266 -------------------------------AYAVLAEMPKKGCVPDVITYHCFFRCL-- 292
A +L+EM KG D+ Y + L
Sbjct: 386 LRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCN 445
Query: 293 -EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFA 351
K E L +M ESG+ P Y ++ + G + + +K+ + G P+
Sbjct: 446 VHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVIT 505
Query: 352 YNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
Y AL+D L G +D A + +M GL P + T LV G
Sbjct: 506 YCALIDGLCKAGSIDEAISHFNKMRDLGLD--PNVQAYTALVDG 547
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 7/158 (4%)
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
+D A+R +RE+ P+ TCN ++ L + R + ++P P+V T++
Sbjct: 138 LDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLP----APNVFTFNI 193
Query: 288 F--FRCLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
F C E + E LF RM E G P + T+ L+ +G+ G L V + ++M G
Sbjct: 194 VIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG 253
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
C D YNAL++ G ++ A Y M +G+ A
Sbjct: 254 CKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMA 291
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 3/133 (2%)
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG-LFDRMIESG 309
+T++ +L + G + +A +A + + P+ T C L R+ G L R+ E
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPN--TRTCNHILLRLARDRSGRLVRRLFEQL 183
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
P + T+ +++ + G L ++ +M+E+GC PD +N+L+D G LD
Sbjct: 184 PAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVE 243
Query: 370 KYDEEMFAKGLSA 382
+ EEM G A
Sbjct: 244 QLVEEMRRSGCKA 256
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 171/353 (48%), Gaps = 11/353 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+NS+ID GK E D L+ M+ + + T+ + + + A G F
Sbjct: 225 TFNSLIDGYGKCGELDEVEQLVEEMRRSGCK-ADVVTYNALINCFCKFGRMETAYGYFAA 283
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G + + V++ VDA C+ V EA +L F + + G + +N+ Y ++ G
Sbjct: 284 MKREGVMANVVTFSTFVDAFCKEGLVREAMKL-FAQMRVRGMA----LNEFT-YTCLIDG 337
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K +EM ++GV ++ +Y++ +D +CK K +A + + M+K G++ +
Sbjct: 338 TCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRAN 397
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ Y T+I +++ + A+ + EM+ G + + +I+ LC ++ EA ++L
Sbjct: 398 ELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLT 457
Query: 272 EMPKKGCVPDVITYHCFF-RCLE--KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+M + G P+ I Y C + K E + + ++++SG +P + TY L+ + G
Sbjct: 458 KMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAG 517
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ + KM +LG P+ AY ALVD L G L+ A + EM KG+S
Sbjct: 518 SIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMS 570
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 164/355 (46%), Gaps = 15/355 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++I+ KF + ++ MK + N TF + LV EAM F +
Sbjct: 260 TYNALINCFCKFGRMETAYGYFAAMK-REGVMANVVTFSTFVDAFCKEGLVREAMKLFAQ 318
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G+ +E +Y L+D C+ + +A L E G V +N Y +++ G
Sbjct: 319 MRVRGMALNEFTYTCLIDGTCKAGRLDDAIVL-LDEMVRQG----VPLNVVT-YTVLVDG 372
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKD--LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
K + + M+K GV + L++ I+ M K+ + KA+ L EMK KG++
Sbjct: 373 LCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSE--KALGLLSEMKNKGLE 430
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
+D+ Y +I+ + +D A + +M E G +P+ + T++ ++G+V EA A+
Sbjct: 431 LDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAM 490
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGR 326
L ++ G P+VITY L K I + F++M + G+ P + Y L+ +
Sbjct: 491 LQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCK 550
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G L ++ +M G S D+ Y AL+D + +G L A +M GL
Sbjct: 551 NGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQ 605
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 116/257 (45%), Gaps = 9/257 (3%)
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
T+ N IL + R +E++ V +++I +D +CK G+ +A L+
Sbjct: 157 TRTCNHILLRLARDRSGRLVRRLFEQLPAPNVF----TFNIVIDFLCKEGELAEARSLFS 212
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
MK+ G DVV +N++I G +D ++ EMR GC+ VVT N +I C+ G
Sbjct: 213 RMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFG 272
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYV 318
R+ AY A M ++G + +V+T+ F K RE + LF +M G+ TY
Sbjct: 273 RMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYT 332
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
L+ + G L V+ +M G + Y LVD L + + A M
Sbjct: 333 CLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKA 392
Query: 379 GLSAKPREELGTKLVQG 395
G+ A E L T L+ G
Sbjct: 393 GVRAN--ELLYTTLIHG 407
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 169/404 (41%), Gaps = 52/404 (12%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T T N ++ L + D S L+ R+ + + PN TF I+ + EA F
Sbjct: 157 TRTCNHILLRLAR----DRSGRLVRRLFEQLPA-PNVFTFNIVIDFLCKEGELAEARSLF 211
Query: 91 NKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+++ E G L D V++ +L+D + + E ++L E + G V YN ++
Sbjct: 212 SRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL-VEEMRRSGCKADV-----VTYNALI 265
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
+ K ++ M + GV+ ++ ++S ++D CK G +A+KL+ +M+ +G+
Sbjct: 266 NCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMA 325
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE---- 265
++ Y +I + +D A+ + EM G +VVT ++ LC+ +V E
Sbjct: 326 LNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDV 385
Query: 266 -------------------------------AYAVLAEMPKKGCVPDVITYHCFFRCL-- 292
A +L+EM KG D+ Y + L
Sbjct: 386 LRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCN 445
Query: 293 -EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFA 351
K E L +M ESG+ P Y ++ + G + + +K+ + G P+
Sbjct: 446 VHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVIT 505
Query: 352 YNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
Y AL+D L G +D A + +M GL P + T LV G
Sbjct: 506 YCALIDGLCKAGSIDEAISHFNKMRDLGLD--PNVQAYTALVDG 547
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 7/158 (4%)
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
+D A+R +RE+ P+ TCN ++ L + R + ++P P+V T++
Sbjct: 138 LDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLP----APNVFTFNI 193
Query: 288 F--FRCLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
F C E + E LF RM E G P + T+ L+ +G+ G L V + ++M G
Sbjct: 194 VIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG 253
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
C D YNAL++ G ++ A Y M +G+ A
Sbjct: 254 CKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMA 291
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
Query: 234 VYREMREMGCQPSVVTC--NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC 291
++R +G + S + +T++ +L + G + +A +A + + P+ T C
Sbjct: 107 LHRAALALGPRRSALASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPN--TRTCNHIL 164
Query: 292 LEKPREILG-LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF 350
L R+ G L R+ E P + T+ +++ + G L ++ +M+E+GC PD
Sbjct: 165 LRLARDRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVV 224
Query: 351 AYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+N+L+D G LD + EEM G A
Sbjct: 225 TFNSLIDGYGKCGELDEVEQLVEEMRRSGCKA 256
>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 627
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 143/299 (47%), Gaps = 14/299 (4%)
Query: 85 EAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI 144
+A F++L G+ D SY L++ LC+ EA EL + G
Sbjct: 35 DARHVFDELLRRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCP----PDVVS 90
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y+ ++ G+FK K +D+R + ++ +Y+ + +CK+ KA+++ M
Sbjct: 91 YSTVINGFFKEGDLDKM------LDQR-ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMV 143
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K G+ D + YN+++ S A+ ++MR G +P VVT N+++ LC+NGR
Sbjct: 144 KSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCT 203
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLL 321
EA + M K+G PD+ TY + E+ GL D M+ +GI P + +L+
Sbjct: 204 EARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILV 263
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + + +V+ KM + G +P+ Y ++D L G ++ A Y E+M +GL
Sbjct: 264 CAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGL 322
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 133/297 (44%), Gaps = 50/297 (16%)
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
LD+ + V+Y +++ ALC+ + V +A E+ K SG+ M YN I+ G+
Sbjct: 108 LDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVK----SGV--MPDCMTYNSIVHGF 161
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
+ F ++M GV D+ +Y+ MD +CK+G+ +A K++ M K+G+K D+
Sbjct: 162 CSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDI 221
Query: 213 VAYNTVIR-----------------------------------AVGVSEGVDFAMRVYRE 237
Y T+++ A E V+ AM V+ +
Sbjct: 222 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSK 281
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRC 291
MR+ G P+ VT TVI +LC++GRV +A +M +G PD I Y+ C F
Sbjct: 282 MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDK 341
Query: 292 LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
EK E LF M++ GI + ++ + G + ++ M +G PD
Sbjct: 342 WEKAEE---LFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPD 395
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 148/331 (44%), Gaps = 20/331 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS+I L K D + ++ M + +P+ T+ + + ++ EA+ K
Sbjct: 118 TYNSIIAALCKAQTVDKAMEVLTTMVKS-GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKK 176
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G++ D V+Y +L+D LC+ EA+++ F G + Y +L+G
Sbjct: 177 MRSDGVEPDVVTYNSLMDYLCKNGRCTEARKI-FDSMTKRGLKPDI-----TTYGTLLQG 230
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + + M + G+ + + +SI + K K +A+ ++ +M+++G+ +
Sbjct: 231 YATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPN 290
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V Y TVI + S V+ AM + +M + G +P + N++I LC + +A +
Sbjct: 291 AVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFL 350
Query: 272 EMPKKG-CVP-----DVITYHCF-FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
EM +G C+ +I HC R +E + LFD M+ G++P + T L
Sbjct: 351 EMLDRGICLSTIFFNSIIDSHCKEGRVIESGK----LFDLMVRIGVKPDIITLGRFLGSA 406
Query: 325 GR-WGFLRPVFVVWKKMEELGCSPDEFAYNA 354
R + ++ ++ M G E N
Sbjct: 407 RRDYSLFVNIYFIFTNMSNTGDKEKETPVNT 437
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 82/393 (20%), Positives = 139/393 (35%), Gaps = 102/393 (25%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PNH F I+ Y V EAM F+K+ + GL + V+Y ++D LC+ V +A L
Sbjct: 254 PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAM-L 312
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKR------------ 171
F + + G + +YN ++ W K E + EM R
Sbjct: 313 YFEQMIDEGLRP-----DSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSI 367
Query: 172 -----------------------GVVKDL-----------HSYSIYMDI------MCKSG 191
GV D+ YS++++I M +G
Sbjct: 368 IDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGRFLGSARRDYSLFVNIYFIFTNMSNTG 427
Query: 192 KPWKAVKLYKEMKKKGIKMD----VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
K + + YN ++ + ++ D A+R+++ + M +
Sbjct: 428 DKEKETPVNTNGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEA 487
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIE 307
T N +I L + GR EA + G VP+ TY + + +I
Sbjct: 488 RTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL-------------MAENIIG 534
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
G+ ++D ++ ME+ GC+ D N +V L+ +G +
Sbjct: 535 QGLLEELDQ-------------------LFLSMEDNGCTVDSGMLNFIVRELLQRGEITR 575
Query: 368 ARKY----DEEMFAKGLSAKPREELGTKLVQGG 396
A Y DE+ F+ S L L+ GG
Sbjct: 576 AGTYLSMIDEKHFSLEASTA---SLFIDLLSGG 605
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 156/362 (43%), Gaps = 29/362 (8%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY ++I+ L K + L+ M+ PN F + V EA F++
Sbjct: 177 TYGTLINGLCKVGNTSAAIRLLRSMEQGNCQ-PNVVVFSTLIDSLCKDRQVTEAFNIFSE 235
Query: 93 LDEFGLKDE-VSYCNLVDALC---EYKHVIEAQELCFGENKNVGFSGLVEMNKTKI---- 144
+ G+ V+Y +L+ LC E+KHV EM +KI
Sbjct: 236 MITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMN---------------EMVDSKIMPDV 280
Query: 145 --YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
N ++ K + + + M RGV ++ +Y+ MD C + AVK++
Sbjct: 281 FTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDT 340
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M K +V++YNT+I + VD AM ++ EM P+ VT NT+I LC GR
Sbjct: 341 MVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGR 400
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVM 319
+++A ++ EM +G +PD++TY L K R + + L + S P + Y
Sbjct: 401 LQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTT 460
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+L R G L ++ + G P+ + YN ++ L +G+L A K EM G
Sbjct: 461 ILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 520
Query: 380 LS 381
S
Sbjct: 521 CS 522
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 151/322 (46%), Gaps = 23/322 (7%)
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNK-LDEFGLKDEVSYCNLVDALCEYKH-----VIE 119
+H TF + + + ++EA+ TFN+ L + V + L+ ++ + KH +
Sbjct: 37 SHNTFH---SKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLS 93
Query: 120 AQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
Q FG +V ++ + +N N R F S K + K G D +
Sbjct: 94 RQMDSFGIPPDV-YTLAIVINSLCHLN---RVDFAFSALAK-------ILKLGHQPDATT 142
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
++ + +C GK +A+ L+ +M +G + +VV Y T+I + A+R+ R M
Sbjct: 143 FTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSME 202
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---R 296
+ CQP+VV +T+I LC++ +V EA+ + +EM KG P+++TY+ L K +
Sbjct: 203 QGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWK 262
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
+ L + M++S I P + T ++ + G + V M G P+ YNAL+
Sbjct: 263 HVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 322
Query: 357 DALIDKGMLDMARKYDEEMFAK 378
D + +D+A K + M K
Sbjct: 323 DGHCLRNEVDVAVKVFDTMVHK 344
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 110/239 (46%), Gaps = 3/239 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+N +L K +MD G+ D+++ +I ++ +C + A ++
Sbjct: 73 FNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKIL 132
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K G + D + T+IR + V + A+ ++ +M G QP+VVT T+I LC+ G
Sbjct: 133 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTS 192
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
A +L M + C P+V+ + L K R++ +F MI GI P + TY L+
Sbjct: 193 AAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLI 252
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + V + +M + PD F N +VDAL +GM+ A + M +G+
Sbjct: 253 HGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 311
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 144/336 (42%), Gaps = 20/336 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDIL---GKFFE-FDLSWNLIHRMKDNP 61
C +WK N + D T N+V+D L G E D+ +IHR +
Sbjct: 256 CKLCEWKHVTTLMNEM-VDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE-- 312
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL-DEFGLKDEVSYCNLVDALCEYKHVIEA 120
PN T+ + + + V+ A+ F+ + + + + +SY L++ C+ + V +A
Sbjct: 313 ---PNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKA 369
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
L F E + T YN ++ G + + EM RG + DL +Y
Sbjct: 370 MYL-FEEMSRQELTP-----NTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTY 423
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
D +CK+ KA+ L K ++ D+ Y T++ + + ++ A ++ +
Sbjct: 424 RTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSS 483
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL- 299
G QP+V T N +I LC+ G + EA + +EM K GC P+ TY+ R + E L
Sbjct: 484 KGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALR 543
Query: 300 --GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
L + M+ G + T +L+ G + V
Sbjct: 544 TIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSV 579
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 3/190 (1%)
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
+A+ + M K V +N ++ ++ ++ + + R+M G P V T VI
Sbjct: 53 EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVI 112
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIR 311
LC RV A++ LA++ K G PD T+ R C+E K E L LFD+MI G +
Sbjct: 113 NSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQ 172
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
P + TY L+ + G + + ME+ C P+ ++ L+D+L + A
Sbjct: 173 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNI 232
Query: 372 DEEMFAKGLS 381
EM KG+S
Sbjct: 233 FSEMITKGIS 242
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 133/282 (47%), Gaps = 13/282 (4%)
Query: 102 VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKC 161
++Y L+ LC + EA+ + G V ++N ++ G +
Sbjct: 281 MTYGFLLQGLCRVRQADEARAML----------GRVPELNVVLFNTVIGGCLAEGKLAEA 330
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
E +E M +G D H+YSI M +CK G+ AV+L +EM+KKG +VV Y V+ +
Sbjct: 331 TELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHS 390
Query: 222 VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
+ D + EM G + N +I LC++GR+ EA ++ EM +GC PD
Sbjct: 391 FCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPD 450
Query: 282 VITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWK 338
+ +Y+ L E+ E +F+ ++E G+ TY ++ R G + + K
Sbjct: 451 ICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAK 510
Query: 339 KMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+M GCS D +YN L+ A+ G +D + EEM KG+
Sbjct: 511 EMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGI 552
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 147/312 (47%), Gaps = 14/312 (4%)
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDE-FGLK----DEVSYCNLVDALCEYKHVIEAQELCFG 126
++F + L + +L E GLK D +Y L+ LC+ + A L
Sbjct: 312 VLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRL-LR 370
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
E + GF+ Y ++L + K W R EEM +G+ + Y+ +
Sbjct: 371 EMEKKGFA-----PNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYA 425
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+CK G+ +A+ L +EM+ +G D+ +YNT+I + +E ++ A ++ + E G +
Sbjct: 426 LCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVAN 485
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFD 303
+T NT+I L +GR ++A + EM GC DV++Y+ + + K + L L +
Sbjct: 486 GITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLE 545
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
M E GI+P +Y +L+ + + +R + K+M G +PD YN L++ L G
Sbjct: 546 EMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMG 605
Query: 364 MLDMARKYDEEM 375
+ A E++
Sbjct: 606 WMHAALNLLEKL 617
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 119/274 (43%), Gaps = 35/274 (12%)
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRG-VVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
+ YN++L + + M R V ++ + +C+ G+ +A+ L +
Sbjct: 140 RSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALALLR 199
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
M + G D V Y TVI A+ GV A + EM MGC V T + V++ +C G
Sbjct: 200 GMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLG 259
Query: 262 RVREAYAVLAEMPKKGCVPDVITYH------CFFRCLEKPREILG--------------- 300
RVREA ++ M KGC+P V+TY C R ++ R +LG
Sbjct: 260 RVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIG 319
Query: 301 -------------LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
L++ M G +P TY +L+ + G + + ++ME+ G +P
Sbjct: 320 GCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAP 379
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ Y ++ + GM D R EEM AKGL+
Sbjct: 380 NVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLT 413
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 160/378 (42%), Gaps = 20/378 (5%)
Query: 13 RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
RAL + + + +YN V+ +L + + L RM P TF +
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNV 131
+ NEA+ + G + D V Y ++ ALC+ V EA L N+ +
Sbjct: 181 AARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLL---NEML 237
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDK---RGVVKDLHSYSIYMDIMC 188
++N ++ ++RG M G+ RE +D+ +G + + +Y + +C
Sbjct: 238 LMGCAADVNT---FDDVVRG---MCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLC 291
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
+ + +A + M + +++VV +NTVI + A +Y M GCQP
Sbjct: 292 RVRQADEA----RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAH 347
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRM 305
T + ++ LC+ GR+ A +L EM KKG P+V+TY K + L + M
Sbjct: 348 TYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEM 407
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
G+ Y ++ + G + + ++M GC+PD +YN ++ L + +
Sbjct: 408 SAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQM 467
Query: 366 DMARKYDEEMFAKGLSAK 383
+ A E + +G+ A
Sbjct: 468 EEAEHMFENLLEEGVVAN 485
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 140/293 (47%), Gaps = 11/293 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+ ++ L K + L+ M+ + PN T+ I+ + + ++ +
Sbjct: 348 TYSILMHGLCKLGRISSAVRLLREMEKKGFA-PNVVTYTIVLHSFCKNGMWDDTRALLEE 406
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ GL + Y ++ ALC+ + EA L E ++ G + + T IY++
Sbjct: 407 MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGL-IQEMRSQGCNPDICSYNTIIYHLCNNE 465
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + +E + + GVV + +Y+ + + + G+ AV+L KEM G +D
Sbjct: 466 QME-----EAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLD 520
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
VV+YN +I+A+ VD ++ + EM E G +P+ V+ N +I LC+ RVR+A +
Sbjct: 521 VVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSK 580
Query: 272 EMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLL 321
+M +G PD++TY+ L K L L +++ + P + TY +L+
Sbjct: 581 QMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 633
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 103/234 (44%), Gaps = 8/234 (3%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
T + YN +I L K D + LI M+ + P+ ++ + + EA
Sbjct: 412 LTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCN-PDICSYNTIIYHLCNNEQMEEA 470
Query: 87 MGTF-NKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
F N L+E + + ++Y ++ AL +A L K + G ++ Y
Sbjct: 471 EHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLA----KEMILHG-CSLDVVS-Y 524
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N +++ K + EEM ++G+ + SY+I + +CK + A++L K+M
Sbjct: 525 NGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLN 584
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCE 259
+G+ D+V YNT+I + + A+ + ++ P ++T N +I C+
Sbjct: 585 QGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCK 638
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 172/404 (42%), Gaps = 34/404 (8%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C+A+ AL + + TT T+ L + D + L+ M + +P
Sbjct: 154 CHAD----ALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARH-GCVP 208
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL- 123
+ ++ + V EA N++ G +V ++ ++V +C V EA L
Sbjct: 209 DAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLV 268
Query: 124 -------CFGENKNVGF--SGLVEMNKTK---------------IYNMILRGWFKMSWWG 159
C GF GL + + ++N ++ G
Sbjct: 269 DRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLA 328
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+ E +E M +G D H+YSI M +CK G+ AV+L +EM+KKG +VV Y V+
Sbjct: 329 EATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVL 388
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
+ + D + EM G + N +I LC++GR+ EA ++ EM +GC
Sbjct: 389 HSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCN 448
Query: 280 PDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVV 336
PD+ +Y+ L E+ E +F+ ++E G+ TY ++ R G + +
Sbjct: 449 PDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRL 508
Query: 337 WKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
K+M GCS D +YN L+ A+ G +D + EEM KG+
Sbjct: 509 AKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGI 552
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 147/312 (47%), Gaps = 14/312 (4%)
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDE-FGLK----DEVSYCNLVDALCEYKHVIEAQELCFG 126
++F + L + +L E GLK D +Y L+ LC+ + A L
Sbjct: 312 VLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRL-LR 370
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
E + GF+ Y ++L + K W R EEM +G+ + Y+ +
Sbjct: 371 EMEKKGFA-----PNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYA 425
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+CK G+ +A+ L +EM+ +G D+ +YNT+I + +E ++ A ++ + E G +
Sbjct: 426 LCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVAN 485
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFD 303
+T NT+I L +GR ++A + EM GC DV++Y+ + + K + L L +
Sbjct: 486 GITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLE 545
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
M E GI+P +Y +L+ + + +R + K+M G +PD YN L++ L G
Sbjct: 546 EMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMG 605
Query: 364 MLDMARKYDEEM 375
+ A E++
Sbjct: 606 WMHAALNLLEKL 617
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 160/353 (45%), Gaps = 13/353 (3%)
Query: 32 DTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
+T++ V+ + + L+ RM +P T+ + + +EA
Sbjct: 246 NTFDDVVRGMCGLGRVREAARLVDRMMTK-GCMPGVMTYGFLLQGLCRVRQADEARAMLG 304
Query: 92 KLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
++ E + V + ++ + EA EL + +G G T Y++++ G
Sbjct: 305 RVPELNV---VLFNTVIGGCLAEGKLAEATEL----YETMGLKGCQPDAHT--YSILMHG 355
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K+ G EM+K+G ++ +Y+I + CK+G L +EM KG+ ++
Sbjct: 356 LCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLN 415
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
YN +I A+ +D AM + +EMR GC P + + NT+I LC N ++ EA +
Sbjct: 416 SQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFE 475
Query: 272 EMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+ ++G V + ITY+ L + ++ + L MI G + +Y L++ + G
Sbjct: 476 NLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDG 535
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ V+ ++M E G P+ +YN L+ L + + A + ++M +GL+
Sbjct: 536 NVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLA 588
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 119/274 (43%), Gaps = 35/274 (12%)
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRG-VVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
+ YN++L + + M R V ++ + +C+ G+ +A+ L +
Sbjct: 140 RSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLR 199
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
M + G D V Y TVI A+ GV A + EM MGC V T + V++ +C G
Sbjct: 200 GMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLG 259
Query: 262 RVREAYAVLAEMPKKGCVPDVITYH------CFFRCLEKPREILG--------------- 300
RVREA ++ M KGC+P V+TY C R ++ R +LG
Sbjct: 260 RVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIG 319
Query: 301 -------------LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
L++ M G +P TY +L+ + G + + ++ME+ G +P
Sbjct: 320 GCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAP 379
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ Y ++ + GM D R EEM AKGL+
Sbjct: 380 NVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLT 413
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 160/378 (42%), Gaps = 20/378 (5%)
Query: 13 RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
RAL + + + +YN V+ +L + + L RM P TF +
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNV 131
+ +EA+ + G + D V Y ++ ALC+ V EA L N+ +
Sbjct: 181 AARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLL---NEML 237
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDK---RGVVKDLHSYSIYMDIMC 188
++N ++ ++RG M G+ RE +D+ +G + + +Y + +C
Sbjct: 238 LMGCAADVNT---FDDVVRG---MCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLC 291
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
+ + +A + M + +++VV +NTVI + A +Y M GCQP
Sbjct: 292 RVRQADEA----RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAH 347
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRM 305
T + ++ LC+ GR+ A +L EM KKG P+V+TY K + L + M
Sbjct: 348 TYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEM 407
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
G+ Y ++ + G + + ++M GC+PD +YN ++ L + +
Sbjct: 408 SAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQM 467
Query: 366 DMARKYDEEMFAKGLSAK 383
+ A E + +G+ A
Sbjct: 468 EEAEHMFENLLEEGVVAN 485
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 139/293 (47%), Gaps = 11/293 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+ ++ L K + L+ M+ PN T+ I+ + + ++ +
Sbjct: 348 TYSILMHGLCKLGRIGSAVRLLREMEKK-GFAPNVVTYTIVLHSFCKNGMWDDTRALLEE 406
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ GL + Y ++ ALC+ + EA L E ++ G + + T IY++
Sbjct: 407 MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGL-IQEMRSQGCNPDICSYNTIIYHLCNNE 465
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + +E + + GVV + +Y+ + + + G+ AV+L KEM G +D
Sbjct: 466 QME-----EAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLD 520
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
VV+YN +I+A+ VD ++ + EM E G +P+ V+ N +I LC+ RVR+A +
Sbjct: 521 VVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSK 580
Query: 272 EMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLL 321
+M +G PD++TY+ L K L L +++ + P + TY +L+
Sbjct: 581 QMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 633
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 103/234 (44%), Gaps = 8/234 (3%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
T + YN +I L K D + LI M+ + P+ ++ + + EA
Sbjct: 412 LTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCN-PDICSYNTIIYHLCNNEQMEEA 470
Query: 87 MGTF-NKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
F N L+E + + ++Y ++ AL +A L K + G ++ Y
Sbjct: 471 EHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLA----KEMILHG-CSLDVVS-Y 524
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N +++ K + EEM ++G+ + SY+I + +CK + A++L K+M
Sbjct: 525 NGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLN 584
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCE 259
+G+ D+V YNT+I + + A+ + ++ P ++T N +I C+
Sbjct: 585 QGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCK 638
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 163/375 (43%), Gaps = 54/375 (14%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQEL 123
P T+ I+ AH A+ F +L GL+ + N L++ CE K EA ++
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 168
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVV--KDLHSYS 181
+G + Y+++L+ G+ + M + G V ++ +Y+
Sbjct: 169 LLHRTPELGC-----VPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYN 223
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF----------- 230
+D K G KA L+KEM ++GI D+V YN+V+ A+ + +D
Sbjct: 224 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK 283
Query: 231 ------------------------AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
A+RV++EMR P VVT + ++ LC+ G+++EA
Sbjct: 284 RVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 343
Query: 267 YAVLAEMPKKGCVPDVITYHCFFR------CLEKPREILGLFDRMIESGIRPKMDTYVML 320
V M KG PDV +Y+ CL ++ LFD M+ GI P T+ +L
Sbjct: 344 RDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLV---DMTDLFDLMLGDGIAPDFYTFNVL 400
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
++ + G L +++ +M + G PD Y ++ AL G +D A + +M +G+
Sbjct: 401 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 460
Query: 381 SAKPREELGTKLVQG 395
+ P + L+QG
Sbjct: 461 A--PDKYAYNCLIQG 473
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 169/396 (42%), Gaps = 62/396 (15%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNSV+ L K D + + +M N +PN+ T+ + Y + EA+ F +
Sbjct: 256 TYNSVVHALCKARAMDKAEAFLRQMV-NKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKE 314
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL-----CFGENKNVGFSGLVEMNKTKIYN 146
+ L D V+ L+ +LC+Y + EA+++ G+N +V FS YN
Sbjct: 315 MRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDV-FS----------YN 363
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++L G+ + ++ M G+ D +++++ + G KA+ ++ EM+
Sbjct: 364 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH 423
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS-------------------- 246
G+K DVV Y TVI A+ +D AM + +M + G P
Sbjct: 424 GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKA 483
Query: 247 ---------------VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------ 285
+V +++I LC+ GRV +A + G PD + Y
Sbjct: 484 KELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDG 543
Query: 286 HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
+C +EK L +FD M+ +GI P + Y L+ + + G + ++++M + G
Sbjct: 544 YCLVGKMEKA---LRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGI 600
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
P Y+ ++D L G A+ EM G++
Sbjct: 601 KPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIA 636
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 159/406 (39%), Gaps = 84/406 (20%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE- 122
PN + + + VN+A F ++ + G+ D V+Y ++V ALC+ + + +A+
Sbjct: 217 PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAF 276
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L NK V + YN ++ G+ W + ++EM + ++ D+ + S+
Sbjct: 277 LRQMVNKRV-------LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSM 329
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN-------------------------- 216
M +CK GK +A ++ M KG DV +YN
Sbjct: 330 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDG 389
Query: 217 ---------TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+I+A +D AM ++ EMR+ G +P VVT TVI LC G++ +A
Sbjct: 390 IAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM 449
Query: 268 AVLAEMPKKGCVPDVITYHCFFR------CLEKPREILG--------------------- 300
+M +G PD Y+C + L K +E++
Sbjct: 450 EKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 509
Query: 301 -----------LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE 349
+FD + G+ P Y ML+ + G + V+ M G P+
Sbjct: 510 CKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV 569
Query: 350 FAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
Y LV+ G +D EM +G+ KP L + ++ G
Sbjct: 570 VVYCTLVNGYCKIGRIDEGLSLFREMLQRGI--KPSTILYSIIIDG 613
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 139/299 (46%), Gaps = 10/299 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ TF ++ K Y ++++AM FN++ + G+K D V+Y ++ ALC + +A E
Sbjct: 392 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 451
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + + G + YN +++G+ K +E E+ G+ D+ +S
Sbjct: 452 -FNQMIDQGVAP-----DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSI 505
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
++ +CK G+ A ++ G+ D V Y+ ++ + ++ A+RV+ M G
Sbjct: 506 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 565
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGL-- 301
+P+VV T++ C+ GR+ E ++ EM ++G P I Y L + +
Sbjct: 566 EPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKV 625
Query: 302 -FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
F M ESGI + TY ++LR + ++K++ + + N ++D +
Sbjct: 626 KFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 684
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 158/366 (43%), Gaps = 38/366 (10%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +VI L + + D + ++M D + P+ + + + + T + +A ++
Sbjct: 431 TYRTVIAALCRIGKMDDAMEKFNQMIDQGVA-PDKYAYNCLIQGFCTHGSLLKAKELISE 489
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGF------------------ 133
+ G+ D V + ++++ LC+ V++AQ + F NVG
Sbjct: 490 IMNNGMHLDIVFFSSIINNLCKLGRVMDAQNI-FDLTVNVGLHPDAVVYSMLMDGYCLVG 548
Query: 134 -------------SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
S +E N +Y ++ G+ K+ + + EM +RG+ Y
Sbjct: 549 KMEKALRVFDAMVSAGIEPNVV-VYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILY 607
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
SI +D + ++G+ A + EM + GI MD+ YN V+R + + D A+ +++E+R
Sbjct: 608 SIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRA 667
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---RE 297
M + +++T NT+I + + RV EA + A + + VP V+TY L K E
Sbjct: 668 MNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEE 727
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+F M +G P ++R+ + + K++E S + LVD
Sbjct: 728 AEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVD 787
Query: 358 ALIDKG 363
KG
Sbjct: 788 LFSSKG 793
>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
Length = 871
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 175/390 (44%), Gaps = 52/390 (13%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N++I + + +L+H M S P+ TF I+ A+ +
Sbjct: 249 TFNAMICGFCRQHRVVVGESLLHLMPKFMCS-PDVVTFNILINACCIGGRTWVAIDWLHL 307
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIYNMI 148
+ G++ V ++ ++ ALC +V+EA++L F G+ +M IYN +
Sbjct: 308 MVRSGVEPSVATFTTILHALCREGNVVEARKL---------FDGIQDMGIAPNAAIYNTL 358
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM------------------------ 184
+ G+FK + +EEM GV D +++I +
Sbjct: 359 MDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGL 418
Query: 185 -------DIM----CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMR 233
D+M C +G+ +A+KL +E+ +KG+ + VVA+N++I A + D A
Sbjct: 419 FLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFE 478
Query: 234 VYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE 293
YR M G PS TCN+++ LC G ++EA +L M +KG + + Y
Sbjct: 479 AYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYF 538
Query: 294 KPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF 350
K + G L+ M E GI P + L+ + G + + V+ +M +G P+ F
Sbjct: 539 KMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNF 598
Query: 351 AYNALVDALIDKGMLDMARKYDEEMFAKGL 380
AYN+L+ L D G + A K ++EM KGL
Sbjct: 599 AYNSLIRGLCDCGRVTEALKLEKEMRQKGL 628
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 146/310 (47%), Gaps = 14/310 (4%)
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFG 126
F + Y A L ++A + + G S CN L+ LC + EA+ L +
Sbjct: 458 VAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYR 517
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
+ GF +NK Y ++L G+FKM+ + W+EM +RG+ D +++ +D
Sbjct: 518 MLEK-GF----PINKVA-YTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDG 571
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+ K+G +A +++ EM G + AYN++IR + V A+++ +EMR+ G
Sbjct: 572 LSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSD 631
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFD 303
T N +I C G+++ A +M + G +PD+ T++ K +++G + +
Sbjct: 632 TFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVN 691
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA----L 359
+M G+ P + TY + + R + ++ ++ G PD YN ++ +
Sbjct: 692 KMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICSDI 751
Query: 360 IDKGMLDMAR 369
+D+ M+ A+
Sbjct: 752 LDRAMILTAK 761
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 158/337 (46%), Gaps = 10/337 (2%)
Query: 25 CHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVN 84
C FT ++ T NS++ L + + L++RM + I N + ++ Y + +
Sbjct: 486 CGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPI-NKVAYTVLLDGYFKMNNLE 544
Query: 85 EAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK 143
A + ++ E G+ D V++ L+D L + +V EA E+ F E +GF +
Sbjct: 545 GAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEV-FLEMSAIGF-----VPNNF 598
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
YN ++RG + + +EM ++G++ D +++I +D C+ G+ A++ + +M
Sbjct: 599 AYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDM 658
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
++ G+ D+ +N +I + + A + +M G P + T NT + C ++
Sbjct: 659 QRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKM 718
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPREILGLFDRMIESGIRPKMDTYVMLL 321
+A +L ++ G VPD +TY+ C + + L ++++ G P + T MLL
Sbjct: 719 NQAVIILDQLISAGIVPDTVTYNTMLSGICSDILDRAMILTAKLLKMGFIPNVITTNMLL 778
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
F + G + +K+ E+ DE +Y L A
Sbjct: 779 SHFCKQGMPEKALIWGQKLREISFGFDEISYRILDQA 815
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 102/241 (42%), Gaps = 3/241 (1%)
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
+ N +LRG+ + + E M GV L S +I + ++ + G KL+K+
Sbjct: 178 SVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKD 237
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M KG + + +N +I V + M + C P VVT N +I C GR
Sbjct: 238 MIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGR 297
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVM 319
A L M + G P V T+ L + ++ LFD + + GI P Y
Sbjct: 298 TWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNT 357
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L+ + + + +++++M G SPD +N LV G ++ + + +++ G
Sbjct: 358 LMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSG 417
Query: 380 L 380
L
Sbjct: 418 L 418
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 3/227 (1%)
Query: 158 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
+G + +++M +G +++ + C+ + L M K DVV +N
Sbjct: 228 YGSVWKLFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNI 287
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
+I A + A+ M G +PSV T T++ LC G V EA + + G
Sbjct: 288 LINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMG 347
Query: 278 CVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
P+ Y+ K RE+ L++ M +G+ P T+ +L+ ++G +
Sbjct: 348 IAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSD 407
Query: 335 VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ K + G D Y+ +V +L G LD A K +E+ KGL+
Sbjct: 408 RLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLT 454
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 166/373 (44%), Gaps = 13/373 (3%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A +AL+ F E C ++ TYN +I + D +++L+ M D N
Sbjct: 4 AGSHNQALQLFR--ENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREM-DVEGMQCND 60
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFG--LKDEVSYCNLVDALCEYKHVIEAQELCF 125
T I+ + V +A+ F+ E D VSY L++ LC+ V A +L
Sbjct: 61 RTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLF- 119
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
K V G T YN ++ G K R E KR D+ +Y+ M
Sbjct: 120 --RKMVAAGGCRPNAFT--YNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMA 175
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
+ + G+ +A+ + +M ++G +V++N +I + + + A+ V+ EM + P
Sbjct: 176 ALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHP 235
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLF 302
++VT + VI LC++ ++ EA +L M +GC PD++ Y F + LGL
Sbjct: 236 NLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLL 295
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
RM+ G P + TY +++ K + G + +++++ CSP+ Y+AL+
Sbjct: 296 RRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRA 355
Query: 363 GMLDMARKYDEEM 375
+D K EM
Sbjct: 356 SRVDEGGKVMREM 368
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 149/355 (41%), Gaps = 7/355 (1%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C +ALE F+ H +Y ++I+ L K D +++L +M P
Sbjct: 71 CRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRP 130
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N T+ + ++ A + + D V+Y L+ AL + V EA
Sbjct: 131 NAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALAT- 189
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F + G+ + +N I+ G + E + EM R +L +YS+ +
Sbjct: 190 FTQMTEEGY-----VPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVI 244
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D +CKS + +A +L M +G + D+VAY ++ + +D A+ + R M GC
Sbjct: 245 DGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCI 304
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDR 304
P VVT VI LC+ GRV +A+ + E+ C P+V+TY + +
Sbjct: 305 PDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKV 364
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
M E RP + TY ++ + ++++M E G PD Y L AL
Sbjct: 365 MREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 419
>gi|296081511|emb|CBI20034.3| unnamed protein product [Vitis vinifera]
Length = 596
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 178/399 (44%), Gaps = 45/399 (11%)
Query: 4 LSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
L + + K A FF W FTH + TYN+++ +LG+ +F+ ++ M +
Sbjct: 197 LERFKHARKPAFRFFCWAGQKAGFTHNSRTYNAMMSVLGRTRQFESMMGMLGEMGE--KG 254
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQE 122
+ TF I K + A +A+G F + + V N L+D L K EAQ
Sbjct: 255 LLTMETFSIAIKAFAAAKERKKAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQA 314
Query: 123 LCFGENKNVGFSGLVE--MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
L F L + + Y ++L GW ++ + W EM +G D+ ++
Sbjct: 315 L---------FEKLEDRFTPNLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAH 365
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
++ + K K A+KL++ MK KG +V Y +IR + + A+ + EM +
Sbjct: 366 HTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMQEAVEYFDEMVD 425
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPRE 297
GCQP +I ++ + YA+L EM +KGC D TY+ + + + P +
Sbjct: 426 SGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDD 485
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ ++ +MI++GI+ + TY M+++ + + + E+GC+
Sbjct: 486 AVRIYKKMIQNGIQSTLHTYNMMMKSY-----------FYTRNYEMGCA----------- 523
Query: 358 ALIDKGMLDMARKYDEEMFAKGLS--AKPR--EELGTKL 392
+I+KGM A + D FA S KP EEL K+
Sbjct: 524 EMIEKGM--KAPQLDYNKFAADFSRAGKPDILEELARKM 560
>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 167/379 (44%), Gaps = 27/379 (7%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM---------------KDNP 61
FF + D +T YNSV++ L +++L+ + +
Sbjct: 259 FFEEMHEDMDPKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKA 318
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA 120
PN TF I+ + ++ A+G F + G K D + Y NL+D LC +
Sbjct: 319 MVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRL--- 375
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL-HS 179
QE C G + + SG+ + T N I + ++M G V + HS
Sbjct: 376 QESC-GLLQEMEESGIEPTSFTN--NCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHS 432
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
S+ + +CK GK +A K +M ++G + D+VAY+ + + + VD A+++++++
Sbjct: 433 TSLVKE-LCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDIC 491
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---R 296
G P V+ N +IK LC+ R+ EA +L EM +KG VP +TY+ L K
Sbjct: 492 AQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLE 551
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
E + MIE P + TY L+ G V+W +M GC+P AY A +
Sbjct: 552 EAMLFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFI 611
Query: 357 DALIDKGMLDMARKYDEEM 375
L + G + A Y EM
Sbjct: 612 HGLSNCGRPNEALVYLREM 630
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 165/373 (44%), Gaps = 20/373 (5%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDN---PSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
YN++ID L S L+ M+++ P+S N+ F + +R H ++ A+
Sbjct: 362 YNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFGCLCRR----HDISGALHLL 417
Query: 91 NKLDEFGLKDEVSYC-NLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
K+ G + + +LV LC++ +EA + + GF + Y+ L
Sbjct: 418 KKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKF-LVDMAEEGFQPDIVA-----YSACL 471
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G K+ + + ++++ +G D+ +Y+I + +CK+ + +A L EM++KG+
Sbjct: 472 DGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLV 531
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
V YNT+I + ++ ++ AM M E +P+V+T +T+I LC GR +A +
Sbjct: 532 PSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVL 591
Query: 270 LAEMPKKGCVPDVITYHCFFRCLE---KPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
EM +KGC P I Y F L +P E L M E ++P YV LL F
Sbjct: 592 WNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREMKPDTYVYVGLLNAFLV 651
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPRE 386
F + ++M + G PD N + + +L + K L AK
Sbjct: 652 DSNQPLAFEILQEMVDKGKFPDLHDKNHIS---VRNAILKFSEDARTSSSIKNLLAKGSI 708
Query: 387 ELGTKLVQGGLDG 399
+ V G DG
Sbjct: 709 PSASLSVTGITDG 721
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 175/399 (43%), Gaps = 41/399 (10%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILG--KFFEFDLSWNLIHRMKDNPSS 63
C ++ +AL+ FN + H D Y I +L K+ + D + LI M++
Sbjct: 112 CNMAEFDKALDVFNEI----HDRGWVDEYVFSILVLAFSKWGKVDKACELIETMEEKNVR 167
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQE 122
+ N TF + +V V++A+ F+K+ + G ++S Y ++ LC K V +A
Sbjct: 168 L-NKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKA-- 224
Query: 123 LC-FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKC--REFWEEMDKRGVVKDLHS 179
LC + E K G KI ++ + K C E E+MD +
Sbjct: 225 LCLYSEMK-----GFKIQPDVKIVTKLISSFSKEEEL-TCFFEEMHEDMDPKASTL---L 275
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMK----------------KKGIKMDVVAYNTVIRAVG 223
Y+ ++ + +G KA L + + K + + ++ VI +
Sbjct: 276 YNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLI 335
Query: 224 VSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVI 283
+ +D A+ ++R+M +GC+P ++ N +I LC + R++E+ +L EM + G P
Sbjct: 336 KTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSF 395
Query: 284 TYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
T +C F CL + +I G L +M G P + L+++ + G M
Sbjct: 396 TNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDM 455
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
E G PD AY+A +D LI +D A K +++ A+G
Sbjct: 456 AEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQG 494
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 153/350 (43%), Gaps = 29/350 (8%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+Y ++++L K DL + M D+ + T + + Y ++A+ FN+
Sbjct: 68 SYTCLLEVLSKSICIDLLEMRLKEMHDHGWGFDKY-TLTPVLQVYCNMAEFDKALDVFNE 126
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFG-ENKNVGFSGLVEMNKTKIYNMILRG 151
+ + G DE + LV A ++ V +A EL E KNV +NK K + ++ G
Sbjct: 127 IHDRGWVDEYVFSILVLAFSKWGKVDKACELIETMEEKNV------RLNK-KTFCSLIYG 179
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K S K +++M K G D+ Y + + +C + KA+ LY EMK I+ D
Sbjct: 180 FVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPD 239
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMRE-MGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
V +I + E + + EM E M + S + N+V+ L +NG V +AY +L
Sbjct: 240 VKIVTKLISSFSKEEELTC---FFEEMHEDMDPKASTLLYNSVLNSLVDNGSVHKAYHLL 296
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
+ C+ D EI LF ++ + P T+ +++ + G L
Sbjct: 297 QAITIGNCIGD--------------GEIGKLFRG--KAMVPPNSTTFSIVINGLIKTGDL 340
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+++ M +GC PD YN L+D L L + +EM G+
Sbjct: 341 DLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGI 390
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 154/354 (43%), Gaps = 23/354 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T N ++D L + + L++++ RM + +P+ + + + + A G
Sbjct: 76 TCNFLVDALARSRNYGLAFSVYRRMT-HVDVLPSFGSLSALIECFADAQKPQLGFGVVGL 134
Query: 93 LDEFGLKDEVSYCNLV-DALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI------Y 145
+ + G V N+V LC V EA L + EM + + Y
Sbjct: 135 VLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGL------------IREMGRKSVSPDIVSY 182
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N ++ G K + EM+ G + + + MD +CK G+ +A++L + MKK
Sbjct: 183 NTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKK 242
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
KG DVV Y T+I + +D ++ EM G +VVT + ++ LC G+ +E
Sbjct: 243 KGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKE 302
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLR 322
A VL M + G PDV+TY L K + L + M+E G P TY +LL
Sbjct: 303 ANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLS 362
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
+ G + F + + M E G D YN L+ L DKG +D A K MF
Sbjct: 363 GLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMF 416
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 165/355 (46%), Gaps = 13/355 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+YN++I+ L K + + L+ M + PN T + ++EAM
Sbjct: 181 SYNTLINGLCKAKKLKEAVGLLLEM-EAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEA 239
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + G D V Y L+ C ++ +EL F E G S V Y+ ++ G
Sbjct: 240 MKKKGFDADVVLYGTLISGFCNNGNLDRGKEL-FDEMLGKGISANV-----VTYSCLVHG 293
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
++ W + M + G+ D+ +Y+ +D +CK G+ A+ L M +KG +
Sbjct: 294 LCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPS 353
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V YN ++ + V A ++ R M E G + VVT NT++K LC+ G+V EA +
Sbjct: 354 NVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFN 413
Query: 272 EM-PKKGCV-PDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGR 326
M + C+ P+V T++ L K + + + +M++ G + TY MLL +
Sbjct: 414 SMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLK 473
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G ++ +WK++ +LG P+ F Y+ L+D ML++A+ EM GL+
Sbjct: 474 AGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLN 528
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 173/381 (45%), Gaps = 16/381 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHT-TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C WK A N + H H TY +ID L K + +L++ M +
Sbjct: 295 CRLGQWKEANTVLNAMAE--HGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEE- 351
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P++ T+ ++ LV +A + E G K D V+Y L+ LC+ V EA +L
Sbjct: 352 PSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKL 411
Query: 124 --CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
+N+N +E N +NM++ G K K + +M K+G +L +Y+
Sbjct: 412 FNSMFDNENC-----LEPN-VFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYN 465
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+ + K+GK +A++L+K++ G + Y+ +I ++ A ++ EMR
Sbjct: 466 MLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTH 525
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE---I 298
G P++ NT++ LC+ G + +A ++ EM C PD+I+++ K + +
Sbjct: 526 GLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFV 585
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
L +M+E G+RP T+ L+ + + G L ++M G +PD Y++L+
Sbjct: 586 KELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKG 645
Query: 359 LIDKGMLDMARKYDEEMFAKG 379
L KG +M AKG
Sbjct: 646 LSSKGDTTEIINLLHQMAAKG 666
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 108/216 (50%), Gaps = 9/216 (4%)
Query: 170 KRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVD 229
KRG ++ +I + +C++G ++A+ L +EM +K + D+V+YNT+I + ++ +
Sbjct: 137 KRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLK 196
Query: 230 FAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY---- 285
A+ + EM GC P+ VTC T++ LC++GR+ EA +L M KKG DV+ Y
Sbjct: 197 EAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLI 256
Query: 286 --HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
C L++ +E LFD M+ GI + TY L+ R G + V M E
Sbjct: 257 SGFCNNGNLDRGKE---LFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEH 313
Query: 344 GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
G PD Y L+D L G A M KG
Sbjct: 314 GIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKG 349
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 97/237 (40%), Gaps = 32/237 (13%)
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N ++ + +G + M V+ S S ++ + KP + + K
Sbjct: 78 NFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLK 137
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+G ++V N V++ + + GV AM + REM P +V+ NT+I LC+ +++E
Sbjct: 138 RGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKE 197
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
A +L EM GC P+ +T L D + + G +MD + LL
Sbjct: 198 AVGLLLEMEAAGCFPNSVTCTT-------------LMDGLCKDG---RMDEAMELLEAMK 241
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ GF D Y L+ + G LD ++ +EM KG+SA
Sbjct: 242 KKGF----------------DADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISA 282
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 103/241 (42%), Gaps = 9/241 (3%)
Query: 54 IHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALC 112
IHR S N T+ ++ + A + EAM + ++ + G + + +Y L+D C
Sbjct: 448 IHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFC 507
Query: 113 EYKHVIEAQELCFGENKNVGFS-GLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKR 171
+ + + A+ L F E + G + L + YN ++ K + + ++EM
Sbjct: 508 KMRMLNIAKGL-FCEMRTHGLNPALFD------YNTLMASLCKEGSLEQAKSLFQEMGNA 560
Query: 172 GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFA 231
D+ S++ +D K+G +L +M + G++ D + ++T+I + +D A
Sbjct: 561 NCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEA 620
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC 291
M G P + ++++K L G E +L +M KG V D C
Sbjct: 621 KSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTC 680
Query: 292 L 292
L
Sbjct: 681 L 681
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 155/360 (43%), Gaps = 52/360 (14%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P T+ I+ AH A+ F +L GL+ D + +L+ CE K EA ++
Sbjct: 111 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 170
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVV--KDLHSYS 181
+G + YN++L+ G+ + M + G V D+ +Y+
Sbjct: 171 LLHRTPELGC-----VPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYN 225
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF----------- 230
+D K G KA L+KEM ++GI D+V Y++V+ A+ + +D
Sbjct: 226 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNK 285
Query: 231 ------------------------AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
A+RV++EMR P VV NT++ LC+ G+++EA
Sbjct: 286 GVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEA 345
Query: 267 YAVLAEMPKKGCVPDVITYHCFFR------CLEKPREILGLFDRMIESGIRPKMDTYVML 320
V M KG PDV +Y CL ++ LFD M+ GI P + T+ +L
Sbjct: 346 RDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLV---DMTDLFDLMLGDGIAPDIYTFNVL 402
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
++ + G L +++ +M + G P Y ++ AL G +D A + +M +G+
Sbjct: 403 IKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGV 462
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 161/405 (39%), Gaps = 82/405 (20%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ + + + VN+A F ++ + G+ D V+Y ++V ALC+ + + +A+
Sbjct: 219 PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAF 278
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ + G++ N T YN ++ G+ W + ++EM ++ ++ D+ + +
Sbjct: 279 L----RQMVNKGVLPDNWT--YNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTL 332
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKG-----------------------------------I 208
M +CK GK +A ++ M KG I
Sbjct: 333 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGI 392
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
D+ +N +I+A +D AM ++ EMR+ G +P VVT TVI LC G++ +A
Sbjct: 393 APDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAME 452
Query: 269 VLAEMPKKGCVPDVITYHCFFR------CLEKPREILG---------------------- 300
+M +G VPD YHC + L K +E++
Sbjct: 453 KFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLC 512
Query: 301 ----------LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF 350
+FD + G+ P Y ML+ + G + V+ M G P+
Sbjct: 513 KLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVV 572
Query: 351 AYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
Y LV+ G +D EM KG+ KP L ++ G
Sbjct: 573 GYGTLVNGYCKIGRIDEGLSLFREMLQKGI--KPSTILYNIIIDG 615
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 168/393 (42%), Gaps = 56/393 (14%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+SV+ L K D + + +M N +P++ T+ + Y + EA+ F +
Sbjct: 258 TYSSVVHALCKARAMDKAEAFLRQMV-NKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKE 316
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL-----CFGENKNVGFSGLVEMNKTKIYN 146
+ L D V+ L+ +LC+Y + EA+++ G+N +V FS Y
Sbjct: 317 MRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDV-FS----------YT 365
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++L G+ + ++ M G+ D++++++ + G KA+ ++ EM+
Sbjct: 366 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDH 425
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS-------------------- 246
G+K VV Y TVI A+ +D AM + +M + G P
Sbjct: 426 GVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKA 485
Query: 247 ---------------VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR- 290
+V ++I LC+ GRV +A + G PD + Y+
Sbjct: 486 KELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDG 545
Query: 291 -CL-EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
CL K + L +FD M+ +GI P + Y L+ + + G + ++++M + G P
Sbjct: 546 YCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS 605
Query: 349 EFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
YN ++D L + G A+ EM G++
Sbjct: 606 TILYNIIIDGLFEAGRTVPAKVKFHEMTESGIA 638
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 170/384 (44%), Gaps = 18/384 (4%)
Query: 4 LSCYAN--DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+ YAN +A+ FN + H TY +VI L + + D + ++M D
Sbjct: 403 IKAYANCGMLDKAMIIFNEMRDHGVKPHVV-TYMTVIAALCRIGKMDDAMEKFNQMIDQ- 460
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA 120
+P+ + + + + T + +A +++ G++ D V + ++++ LC+ V++A
Sbjct: 461 GVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDA 520
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
Q + F NVG +YNM++ G+ + K ++ M G+ ++ Y
Sbjct: 521 QNI-FDLTVNVGLH-----PDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGY 574
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
++ CK G+ + + L++EM +KGIK + YN +I + + A + EM E
Sbjct: 575 GTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTE 634
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---E 297
G + T + V++ L +N EA + E+ D+IT + + + R E
Sbjct: 635 SGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEE 694
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
LF + SG+ P TY +++ + G + ++ M+ GC PD N +V
Sbjct: 695 AKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVR 754
Query: 358 ALIDKGMLDMARKY----DEEMFA 377
L+ K + A Y DE F+
Sbjct: 755 ELLKKNEIVRAGAYLSKIDERNFS 778
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 157/368 (42%), Gaps = 45/368 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+ ++D K + + L+ M+ P+ T+ ++ + V EA+ N
Sbjct: 197 TYSILLDATCKESGYKQAVVLLDEMRSKGCE-PDIVTYNVLINAMCSQGDVGEALKVLNS 255
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
L +G K D V+Y ++ +LC + EA +L N V +N ++
Sbjct: 256 LPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEV------TFNAVITS 309
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + G+ + +M + G D+ +YS MD +CK + +A+KL KE+
Sbjct: 310 LCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKEL-------- 361
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
EM C P VT NT+I LC+ G A V+
Sbjct: 362 -----------------------LAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVD 398
Query: 272 EMPKKGCVPDVITYHCF---FRCLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
EM + GC+PD+ TY+C F C K E L L + M+ +G+ P TY L R
Sbjct: 399 EMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSRE 458
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREE 387
+ ++++++ +G SPD+ YNA++ L K D+A + M + G P E
Sbjct: 459 DEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNG--CMPDES 516
Query: 388 LGTKLVQG 395
LV+G
Sbjct: 517 TYIILVEG 524
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 135/301 (44%), Gaps = 15/301 (4%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGEN 128
T+ M Y A ++ A + + F D +Y L+ ALC V++A + F +
Sbjct: 130 TYNTMVNGYCRAGNIDAARRMIDSV-PFA-PDTFTYNPLIRALCVRGCVLDALAV-FDDM 186
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
+ G S V Y+++L K S + + +EM +G D+ +Y++ ++ MC
Sbjct: 187 LHRGCSPSV-----VTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMC 241
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
G +A+K+ + G K D V Y V++++ SE + A ++ +M C P V
Sbjct: 242 SQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEV 301
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI-------LGL 301
T N VI LC+ G V A VLA+M + GC PD+ITY L K R + L
Sbjct: 302 TFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKEL 361
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
M+ P T+ ++ + G V +M E GC PD YN +VD +
Sbjct: 362 LAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLC 421
Query: 362 K 362
K
Sbjct: 422 K 422
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 134/307 (43%), Gaps = 20/307 (6%)
Query: 6 CYANDWKRALEFFNWVET-DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C D AL+ N + + C T Y V+ L ++ + L+ +M N +
Sbjct: 241 CSQGDVGEALKVLNSLPSYGCKPDAVT--YTPVLKSLCSSERWEEADKLLTKMFSNDCA- 297
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL 123
P+ TF + V A ++ E G D ++Y +++D LC+ + V EA +L
Sbjct: 298 PDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKL 357
Query: 124 CFGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
K + + +V N +N I+ + + + + +EM + G + D+ +Y
Sbjct: 358 L----KEL-LAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTY 412
Query: 181 SIYMD-IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
+ +D +CKS K +A+ L M G+ D Y ++ + + ++ A+ ++R ++
Sbjct: 413 NCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQ 472
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC------LE 293
MG P + N ++ LC+ R A A M GC+PD TY LE
Sbjct: 473 AMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLE 532
Query: 294 KPREILG 300
+ +E+LG
Sbjct: 533 EAKELLG 539
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 76/184 (41%), Gaps = 32/184 (17%)
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV-------- 279
+D A+R+ + G P+V+ CN +IK LC +GRV +A V+ + +
Sbjct: 77 LDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALGPSATIITYNTMVN 136
Query: 280 ---------------------PDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMD 315
PD TY+ R L + L +FD M+ G P +
Sbjct: 137 GYCRAGNIDAARRMIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVV 196
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
TY +LL + + V+ +M GC PD YN L++A+ +G + A K +
Sbjct: 197 TYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSL 256
Query: 376 FAKG 379
+ G
Sbjct: 257 PSYG 260
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 163/375 (43%), Gaps = 54/375 (14%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQEL 123
P T+ I+ AH A+ F +L GL+ + N L++ CE K EA ++
Sbjct: 112 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 171
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVV--KDLHSYS 181
+G + Y+++L+ G+ + M + G V ++ +Y+
Sbjct: 172 LLHRTPELGC-----VPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYN 226
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF----------- 230
+D K G KA L+KEM ++GI D+V YN+V+ A+ + +D
Sbjct: 227 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK 286
Query: 231 ------------------------AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
A+RV++EMR P VVT + ++ LC+ G+++EA
Sbjct: 287 RVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 346
Query: 267 YAVLAEMPKKGCVPDVITYHCFFR------CLEKPREILGLFDRMIESGIRPKMDTYVML 320
V M KG PDV +Y+ CL ++ LFD M+ GI P T+ +L
Sbjct: 347 RDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLV---DMTDLFDLMLGDGIAPDFYTFNVL 403
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
++ + G L +++ +M + G PD Y ++ AL G +D A + +M +G+
Sbjct: 404 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 463
Query: 381 SAKPREELGTKLVQG 395
+ P + L+QG
Sbjct: 464 A--PDKYAYNCLIQG 476
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 170/393 (43%), Gaps = 56/393 (14%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNSV+ L K D + + +M N +PN+ T+ + Y + EA+ F +
Sbjct: 259 TYNSVVHALCKARAMDKAEAFLRQMV-NKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKE 317
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL-----CFGENKNVGFSGLVEMNKTKIYN 146
+ L D V+ L+ +LC+Y + EA+++ G+N +V FS YN
Sbjct: 318 MRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDV-FS----------YN 366
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++L G+ + ++ M G+ D +++++ + G KA+ ++ EM+
Sbjct: 367 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH 426
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS-------------------- 246
G+K DVV Y TVI A+ +D AM + +M + G P
Sbjct: 427 GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKA 486
Query: 247 ---------------VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR- 290
+V +++I LC+ GRV +A + G PD + Y+
Sbjct: 487 KELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDG 546
Query: 291 -CL-EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
CL K + L +FD M+ +GI P + Y L+ + + G + ++++M + G P
Sbjct: 547 YCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPS 606
Query: 349 EFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
Y+ ++D L + G A+ EM G++
Sbjct: 607 TILYSIIIDGLFEAGRTVPAKMKFHEMTESGIA 639
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 140/299 (46%), Gaps = 10/299 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ TF ++ K Y ++++AM FN++ + G+K D V+Y ++ ALC + +A E
Sbjct: 395 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 454
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + + G + YN +++G+ K +E E+ G+ D+ +S
Sbjct: 455 -FNQMIDQGVAP-----DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSI 508
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
++ +CK G+ A ++ G+ D V YN ++ + ++ A+RV+ M G
Sbjct: 509 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI 568
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL-EKPREILG-- 300
+P+VV T++ C+ GR+ E ++ EM ++G P I Y L E R +
Sbjct: 569 EPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKM 628
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
F M ESGI + TY ++LR + ++K++ + + N ++D +
Sbjct: 629 KFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 687
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 157/366 (42%), Gaps = 38/366 (10%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +VI L + + D + ++M D + P+ + + + + T + +A ++
Sbjct: 434 TYRTVIAALCRIGKMDDAMEKFNQMIDQGVA-PDKYAYNCLIQGFCTHGSLLKAKELISE 492
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGF------------------ 133
+ G+ D V + ++++ LC+ V++AQ + F NVG
Sbjct: 493 IMNNGMHLDIVFFSSIINNLCKLGRVMDAQNI-FDLTVNVGLHPDAVVYNMLMDGYCLVG 551
Query: 134 -------------SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
S +E N Y ++ G+ K+ + + EM +RG+ Y
Sbjct: 552 KMEKALRVFDAMVSAGIEPNVVG-YGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILY 610
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
SI +D + ++G+ A + EM + GI MD+ YN V+R + + D A+ +++E+R
Sbjct: 611 SIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRA 670
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---RE 297
M + +++T NT+I + + RV EA + A + + VP V+TY L K E
Sbjct: 671 MNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEE 730
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+F M +G P ++R+ + + K++E S + LVD
Sbjct: 731 AEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVD 790
Query: 358 ALIDKG 363
KG
Sbjct: 791 LFSSKG 796
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 166/360 (46%), Gaps = 16/360 (4%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
FT TY ++ L K D + L+ ++ PN F + +V +NEA
Sbjct: 311 FTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPG-----PNVVHFNTLVNGFVRNGRLNEA 365
Query: 87 MG-TFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI 144
++K+ G + D ++ LV+ LC+ A EL ++ G T
Sbjct: 366 TAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELV----NDMDAKGCKPNLNT-- 419
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y +++ G+ K + EM +G + Y+ + +CK GK +A+ ++ EM
Sbjct: 420 YTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMS 479
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
KG K D+ +N++I + + ++ A+ +YR+M G + VT NT+I G ++
Sbjct: 480 SKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQ 539
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
EA ++ +M +GC D ITY+ + L K + LGLF+ MI G+ P + T +L+
Sbjct: 540 EALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILI 599
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
F G + + M G SPD YN+L++ L +G + A E++ A+G+
Sbjct: 600 NGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQ 659
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 160/329 (48%), Gaps = 13/329 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T++++++ L K F + L++ M D PN T+ I+ + + EA +
Sbjct: 384 TFSTLVNGLCKKGLFGSALELVNDM-DAKGCKPNLNTYTILIDGFCKKGQLEEAGLILRE 442
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G + V Y L+ ALC++ + EA ++ FGE + G +N ++ G
Sbjct: 443 MLTKGFSLNTVGYNALISALCKHGKIHEALDM-FGEMSSKGCK-----PDIFTFNSLIFG 496
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
++ + +M GV+ + +++ + + G+ +A+KL +M +G +D
Sbjct: 497 LCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLD 556
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ YN +I+A+ + V+ + ++ EM G PS++TCN +I C G+V A +
Sbjct: 557 EITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMR 616
Query: 272 EMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+M +G PD++TY+ L K +E L LF+++ GI+P TY L+ R G
Sbjct: 617 DMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREG 676
Query: 329 -FLRPVFVVWKKMEELGCSPDEFAYNALV 356
F F++++ +E G P++ +N LV
Sbjct: 677 AFDDACFLLYRGVEN-GFVPNDVTWNILV 704
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 140/313 (44%), Gaps = 10/313 (3%)
Query: 60 NPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVI 118
N +P+ TF + L A+ N +D G K + +Y L+D C+ K +
Sbjct: 375 NNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCK-KGQL 433
Query: 119 EAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
E L E GFS +N T YN ++ K + + + EM +G D+
Sbjct: 434 EEAGLILREMLTKGFS----LN-TVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIF 488
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+++ + +C+ + A+ LY++M +G+ + V +NT+I A + A+++ +M
Sbjct: 489 TFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDM 548
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKP 295
GC +T N +IK LC+ G V + + EM +KG P +IT + F K
Sbjct: 549 LFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKV 608
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
L MI G P + TY L+ + G ++ +++K++ G PD YN L
Sbjct: 609 HNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTL 668
Query: 356 VDALIDKGMLDMA 368
+ L +G D A
Sbjct: 669 ICWLCREGAFDDA 681
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 157/387 (40%), Gaps = 44/387 (11%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D + ++E F W + H+ Y +ID LG F + L+ +MK+ + +
Sbjct: 83 DVETSMEIFKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEE-GIVFRESL 141
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENK 129
F ++ K Y A L +A LD G+ YC CE
Sbjct: 142 FILIMKYYGRAGLPGQATRLL--LDMKGV-----YC------CEPSF------------- 175
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
+ YN++L + + +M +GV + +++ + M +C
Sbjct: 176 -------------RSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCM 222
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
+ A L ++M K G + + Y T+I A+ + VD A+++ EM MGC P V T
Sbjct: 223 VNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNT 282
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESG 309
NTVI C RV E ++ M KG P+ +TY L K I ++
Sbjct: 283 FNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRI-DEAQALLSKV 341
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFV-VWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
P + + L+ F R G L V+ KM G PD F ++ LV+ L KG+ A
Sbjct: 342 PGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSA 401
Query: 369 RKYDEEMFAKGLSAKPREELGTKLVQG 395
+ +M AKG KP T L+ G
Sbjct: 402 LELVNDMDAKG--CKPNLNTYTILIDG 426
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 152/361 (42%), Gaps = 26/361 (7%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+YN V+D+L ++ N+ + M S PN TF ++ K + V+ A
Sbjct: 177 SYNVVLDVLVVGNCPSVASNVFYDMLSKGVS-PNDYTFGLVMKALCMVNEVDNACLLLRD 235
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEM------NKTKIY 145
+ + G + + + Y L+DAL + V EA +L L EM +
Sbjct: 236 MTKHGCVPNSMIYQTLIDALSKRDRVDEALKL------------LEEMFLMGCPPDVNTF 283
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N ++ G+ +++ + + + M +G + +Y M +CK+ + +A L ++
Sbjct: 284 NTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPG 343
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+ N +R ++E F VY +M G P V T +T++ LC+ G
Sbjct: 344 PNVVHFNTLVNGFVRNGRLNEATAF---VYDKMINNGYVPDVFTFSTLVNGLCKKGLFGS 400
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFR--CLEKPREILGLFDR-MIESGIRPKMDTYVMLLR 322
A ++ +M KGC P++ TY C + E GL R M+ G Y L+
Sbjct: 401 ALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALIS 460
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ G + ++ +M GC PD F +N+L+ L ++ A +M +G+ A
Sbjct: 461 ALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIA 520
Query: 383 K 383
Sbjct: 521 N 521
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 168/348 (48%), Gaps = 13/348 (3%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN++ID L K +++L M + PN T+ + + +++A G N++
Sbjct: 192 YNTIIDGLCKDKLVRDAFDLYCEMFEK-RVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEM 250
Query: 94 DEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENK-NVGFSGLVEMNKTKIYNMILRG 151
+ V ++ LVD LC+ + EA+ L K VG YN ++ G
Sbjct: 251 VLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFT-------YNALMDG 303
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+F + GK + + M + GV D+HSYS+ + + K +A+ L++ M+ + + D
Sbjct: 304 YFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPD 363
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
VVAY+++I + S ++ A++ EM + G P+V+T ++I LC++ +V +A A+L
Sbjct: 364 VVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLK 423
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWG 328
++ +G ++ TY+ L K + +F ++ G + TY +++ +
Sbjct: 424 KIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKES 483
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
+ KME+ GC PD AY +++A +K M D A K EM
Sbjct: 484 LFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMI 531
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 164/350 (46%), Gaps = 11/350 (3%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
+ ++ L K + + +L RM+ + N+ T I+ Y +N A F K+
Sbjct: 52 FGKILGSLVKTKHYPIVIHLFQRMELHGIQ-SNYITLNILINSYCHLRQINSAFSVFAKI 110
Query: 94 DEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ G + D ++Y L+ LC V E+ L F + S ++++ Y ++ G
Sbjct: 111 LKLGYQPDIITYTTLIRGLCLNGQVKES--LNFHDRL---VSQGIKLDHVS-YGTLINGL 164
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K+ G +++ D+ Y+ +D +CK A LY EM +K + +V
Sbjct: 165 CKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNV 224
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V Y ++I + +D A + EM P+V T NT++ LC+ G++REA +++A
Sbjct: 225 VTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAV 284
Query: 273 MPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M K+G PDV TY+ + +++ + +F+ M + G+ + +Y +++ +
Sbjct: 285 MMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKM 344
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L +++ M PD AY++L+D L G ++ A KY +EM +G
Sbjct: 345 LDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRG 394
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 138/319 (43%), Gaps = 12/319 (3%)
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLD-EFGLKDEVSYCNLVDALCEYKHVIEAQEL- 123
+H ++ + A+ K++ E D V Y ++D LC+ K V +A +L
Sbjct: 153 DHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLY 212
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
C K V F +V Y ++ G+ + K EM + V ++ +++
Sbjct: 213 CEMFEKRV-FPNVVT------YTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTL 265
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D +CK GK +A L M K+G+ DV YN ++ + + A V+ M +MG
Sbjct: 266 VDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGV 325
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LG 300
V + + +I L + + EA + M + +PDV+ Y L K I L
Sbjct: 326 TCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALK 385
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
D M + G P + TY L+ + + + KK+++ G + + YN LVD L
Sbjct: 386 YVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLC 445
Query: 361 DKGMLDMARKYDEEMFAKG 379
G L A+K +++ KG
Sbjct: 446 KDGRLTDAQKVFQDLLMKG 464
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 108/239 (45%), Gaps = 3/239 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+ IL K + ++ M+ G+ + + +I ++ C + A ++ ++
Sbjct: 52 FGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKIL 111
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K G + D++ Y T+IR + ++ V ++ + + G + V+ T+I LC+ G+
Sbjct: 112 KLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTG 171
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFD---RMIESGIRPKMDTYVMLL 321
A +L ++ + C PDV+ Y+ L K + + FD M E + P + TY L+
Sbjct: 172 PALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLI 231
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
F G L F + +M +P+ +N LVD L +G + A+ M +G+
Sbjct: 232 YGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGV 290
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 3/186 (1%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A+ + M + ++ + ++ ++ ++ + +++ M G Q + +T N +I
Sbjct: 33 AIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILIN 92
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRP 312
C ++ A++V A++ K G PD+ITY R CL + +E L DR++ GI+
Sbjct: 93 SYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKL 152
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
+Y L+ + G P + +K+E C PD YN ++D L ++ A
Sbjct: 153 DHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLY 212
Query: 373 EEMFAK 378
EMF K
Sbjct: 213 CEMFEK 218
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 112/242 (46%), Gaps = 8/242 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN+++D E + N+ + M + H ++ +M +++EAM F
Sbjct: 296 TYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVH-SYSVMISGLSKMKMLDEAMDLFEG 354
Query: 93 L-DEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ +E + D V+Y +L+D LC+ + A + E + G + Y ++
Sbjct: 355 MRNENVIPDVVAYSSLIDGLCKSGRINSALKY-VDEMHDRG-----QPPNVITYTSLIDA 408
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K K +++ +G+ ++++Y+I +D +CK G+ A K+++++ KG +D
Sbjct: 409 LCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVD 468
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
VV Y+ +I + D A+ + +M + GC P + T+I E +A +L
Sbjct: 469 VVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLR 528
Query: 272 EM 273
EM
Sbjct: 529 EM 530
>gi|326488077|dbj|BAJ89877.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 395
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 139/287 (48%), Gaps = 9/287 (3%)
Query: 98 LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSW 157
L D++ ++ LC++K + A EL + +N+G S KT YN ++ G
Sbjct: 31 LLDDLFLSPIIRHLCKHKEALAAHEL-VKKFENLGVS-----LKTGSYNALICGLVDEDL 84
Query: 158 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
E + EM + G D +Y + +D M KS + +K+ +EM KG K V YNT
Sbjct: 85 IDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNT 144
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
+I + S+ +D A+ +Y ++ G P+ T ++ L ++G + +A A+ EM + G
Sbjct: 145 IISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECG 204
Query: 278 CVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
C P+ Y+ +R ++ LF+ M+E G+ P + +Y +++ G L
Sbjct: 205 CEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGL 264
Query: 335 VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+K++ ++G PD YN L+ L G L+ A +M KG++
Sbjct: 265 SYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIA 311
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 142/292 (48%), Gaps = 11/292 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+ ++D +GK + + M N + T+ + V + +++EA+ + +
Sbjct: 106 TYHLILDAMGKSMRIEDMLKIQEEMH-NKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQ 164
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
L G +Y L+D L + ++ +A+ L F E G E N IYN++L G
Sbjct: 165 LMSEGFSPTPCTYGPLLDGLLKDGNIEDAEAL-FDEMLECG----CEPN-CAIYNILLNG 218
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K E +E M ++G+ D+ SY++ +D +C G+ + +K++ G++ D
Sbjct: 219 YRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPD 278
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
++ YN +I +G S ++ A+ +Y +M + G P++ T N++I L + G+ EA +
Sbjct: 279 LITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYE 338
Query: 272 EMPKKGCVPDVITYHCFFRCLE---KPREILGLFDRMIESGIRPKMDTYVML 320
E+ KG P+V TY+ R P + RMI G RP TY+ L
Sbjct: 339 ELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 390
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 140/296 (47%), Gaps = 20/296 (6%)
Query: 79 TAHLVNEAMGTFNKL-DEFGLKDE----------VSYCNLVDALCEYKHVIEAQELCFGE 127
T HL+ +AMG ++ D +++E V+Y ++ L + K + EA L + +
Sbjct: 106 TYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYY-Q 164
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
+ GFS Y +L G K ++EM + G + Y+I ++
Sbjct: 165 LMSEGFS-----PTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGY 219
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
+G K +L++ M ++G+ D+ +Y VI + ++ + ++++ +MG +P +
Sbjct: 220 RIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDL 279
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDR 304
+T N +I L ++GR+ EA ++ +M KKG P++ TY+ L K E +++
Sbjct: 280 ITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEE 339
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
++ G +P + TY L+R + G F + +M GC P+ Y L + ++
Sbjct: 340 LLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLPNQML 395
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 108/237 (45%), Gaps = 3/237 (1%)
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++ G K K EF E + G++ D S + +CK + A +L K+ + G
Sbjct: 5 LMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLG 64
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ + +YN +I + + +D A ++ EM+ +GC P T + ++ + ++ R+ +
Sbjct: 65 VSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDML 124
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKF 324
+ EM KG +TY+ L K + E + L+ +++ G P TY LL
Sbjct: 125 KIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGL 184
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ G + ++ +M E GC P+ YN L++ G + + E M +G++
Sbjct: 185 LKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMN 241
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 159/356 (44%), Gaps = 13/356 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A ALE F + DC TY +++ L K +FD + ++ M + P
Sbjct: 103 CDAGRVVEALEHFRAMAKDC--APDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCA-P 159
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKD-EVSYCNLVDALCEYKHVIEAQELC 124
+ TF + +A + + G+ + + ++ ++ LC + +E
Sbjct: 160 DTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKV 219
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
G GF+ V M +N+++ G+ K + E M ++G V ++ +++I +
Sbjct: 220 LGVVIAKGFTPTVLM-----FNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILI 274
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+CK+ + +A +L ++M G +VV Y+TVI + VD A +++ M C
Sbjct: 275 TGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCP 334
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGL 301
P+VVT N +I LC+ R+ EA + M + GC PD+ITY+ L K E L
Sbjct: 335 PNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQL 394
Query: 302 FDRMIESGIR-PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
F + ESG+ TY L + G + ++ + + G SPD Y +L+
Sbjct: 395 FQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLI 450
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 170/391 (43%), Gaps = 50/391 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY++VI+ L K + D ++ L M + + PN T I+ A + EA +++
Sbjct: 304 TYSTVINGLCKQGQVDDAYELFQLM-ERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHR 362
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G D ++Y +L+D LC+ V EA +L + + SG+ N Y+ + G
Sbjct: 363 MRETGCAPDIITYNSLIDGLCKSFQVDEAFQL----FQTIPESGVSAANAVT-YSTLFHG 417
Query: 152 WFKMSWWG-KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPW---------------- 194
+ + CR F +DK G DL +Y+ + CK+ +
Sbjct: 418 YAALGRMADACRIFSMLVDK-GFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPP 476
Query: 195 -------------------KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
+A++L+ M +G D + YN V+ + + D A+ V
Sbjct: 477 RVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVL 536
Query: 236 REM---REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
++ R+ PS + +++ LC+ G+ +A +L +M ++G V +Y+ L
Sbjct: 537 EQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGL 596
Query: 293 EKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE 349
+ + E +F+ M+ +G P++ T +++ + + + ++M +LGC PD
Sbjct: 597 SRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDI 656
Query: 350 FAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
N L+ G D+ARK EEM GL
Sbjct: 657 ETCNTLIGGYCKSGRADLARKLLEEMTEAGL 687
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 162/382 (42%), Gaps = 14/382 (3%)
Query: 6 CYANDWKRALEFF-NWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C N + AL F N + C TY +I + D++ L+ MK +
Sbjct: 33 CRLNRRQEALALFRNAMARIC--MPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFE- 89
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELC 124
N + K A V EA+ F + + D ++Y LV ALC+ EAQ
Sbjct: 90 GNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQ--- 146
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
G + + G T ++ ++ G K + E++ +RG+ ++ +
Sbjct: 147 -GMLREMVAQGCAP--DTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETII 203
Query: 185 DIMC-KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+C K A K+ + KG V+ +N VI ++ +D A ++ M E GC
Sbjct: 204 QRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGC 263
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LG 300
P+V T +I LC+ RV EA +L +M GC P+V+TY L K ++
Sbjct: 264 VPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYE 323
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
LF M P + T+ +L+ + + ++ +M E GC+PD YN+L+D L
Sbjct: 324 LFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLC 383
Query: 361 DKGMLDMARKYDEEMFAKGLSA 382
+D A + + + G+SA
Sbjct: 384 KSFQVDEAFQLFQTIPESGVSA 405
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 153/352 (43%), Gaps = 39/352 (11%)
Query: 6 CYANDWKRALEFFNWV-ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C A + A + ++ + ET C TYNS+ID L K F+ D ++ L + ++ S
Sbjct: 348 CKAKRIEEARQLYHRMRETGC--APDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSA 405
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
N T+ +F Y + +A F+ L + G D +Y +L+ C+ +E EL
Sbjct: 406 ANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVEL 465
Query: 124 C-------FGENKNV---GFSGLVEMNKTK-------------------IYNMILRGWFK 154
F N GL E N T+ IYN+++ G +
Sbjct: 466 VEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMAR 525
Query: 155 MSWWGKCREFWEE-MDKRGVVKDLHSYSI--YMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
S K E+ +DKR + S ++ ++ +C+ GK A +L +M ++G
Sbjct: 526 ASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAA 585
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V +YN ++ + + D A +V+ M G P + T N VI LC +V +AY ++
Sbjct: 586 VSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQ 645
Query: 272 EMPKKGCVPDVITYHCFFRCLEKP-REILG--LFDRMIESGIRPKMDTYVML 320
M K GC PD+ T + K R L L + M E+G+ P T+ +L
Sbjct: 646 RMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 99/213 (46%), Gaps = 5/213 (2%)
Query: 173 VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM 232
V ++ S + +D++C+ + +A+ L++ + + Y +IR + +D A+
Sbjct: 18 VGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAI 77
Query: 233 RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
++ EM+ G + + V T++K LC+ GRV EA M K C PDV+TY L
Sbjct: 78 QLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKD-CAPDVMTYTALVHAL 136
Query: 293 EKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE 349
K E G+ M+ G P T+ L+ ++G F V + + + G +
Sbjct: 137 CKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSD 196
Query: 350 FAYNALVDALIDK-GMLDMARKYDEEMFAKGLS 381
A+ ++ L +K +++A K + AKG +
Sbjct: 197 AAFETIIQRLCNKYNSVELASKVLGVVIAKGFT 229
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 175/396 (44%), Gaps = 18/396 (4%)
Query: 6 CYANDWKRALEFFNWV-ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C A ++ A E F + C+ + TY S+ID LGK D ++ L M D +
Sbjct: 437 CKAKKFEPAYEMFETASQRGCN--PNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHN- 493
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNL-VDALCEYKHV-IEAQE 122
N + + + + + F +++ G + +++ N +D C +K +E
Sbjct: 494 ANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMD--CVFKAGDVEKGR 551
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
F + K GF + + Y++++ G K + + M ++G D +Y+
Sbjct: 552 AIFEDIKGYGF-----LPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNA 606
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D CKSGK KA ++ +EMK K + V Y ++I + + +D A ++ E + G
Sbjct: 607 VVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKG 666
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---L 299
+ +V+ +++I + GR+ EAY +L EM KKG P+V T++ L K EI L
Sbjct: 667 IELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEAL 726
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
F M E P TY +L+ R FV W++M++ G P+ Y ++ L
Sbjct: 727 ICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGL 786
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
G + A E A G P L++G
Sbjct: 787 AKVGNITDACSLFERFKANG--GTPDAASFNALIEG 820
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 182/412 (44%), Gaps = 38/412 (9%)
Query: 4 LSCYANDWK--RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
L+C K AL F ++ D + TYN +ID+L + + ++ +I ++
Sbjct: 364 LTCLGKKRKVDEALTLFEAMKKDAE--PNSSTYNIIIDMLCMAGKVEEAY-MIRDEMEHA 420
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA 120
PN T IM R A A F + G + V+YC+L+D L + +V +A
Sbjct: 421 GLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDA 480
Query: 121 QELC-----FGENKN-VGFSGLV-----------------EMNK------TKIYNMILRG 151
L G N N V ++ L+ EMN+ + N +
Sbjct: 481 YRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDC 540
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
FK K R +E++ G + D+ SYSI + + K+G+ + ++ MK++G +D
Sbjct: 541 VFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALD 600
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
AYN V+ S +D A V EM+ P+V T ++I L + R+ EAY +
Sbjct: 601 ARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFE 660
Query: 272 EMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
E KG +VI Y F + + E + + M++ G+ P + T+ L+ +
Sbjct: 661 EAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAE 720
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + ++ M+E+ CSP+ + Y+ L++ L + A + +EM +GL
Sbjct: 721 EINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGL 772
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 167/386 (43%), Gaps = 51/386 (13%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMK----------------------------------D 59
YN ID GK D++W H +K +
Sbjct: 255 YNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQME 314
Query: 60 NPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVI 118
++P + M Y +A A ++L E G + VS+ +++ L + + V
Sbjct: 315 TERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVD 374
Query: 119 EAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFW---EEMDKRGVVK 175
EA L K+ E N + YN+I+ + GK E + +EM+ G+
Sbjct: 375 EALTLFEAMKKDA------EPNSST-YNIIID---MLCMAGKVEEAYMIRDEMEHAGLFP 424
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
+L + +I +D +CK+ K A ++++ ++G + V Y ++I +G VD A R++
Sbjct: 425 NLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLF 484
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP 295
M + G + V ++I+ +GR + + + EM ++GC PD+ + + C+ K
Sbjct: 485 ENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKA 544
Query: 296 REI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
++ +F+ + G P + +Y +L+ + G R ++ M++ G + D AY
Sbjct: 545 GDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAY 604
Query: 353 NALVDALIDKGMLDMARKYDEEMFAK 378
NA+VD G LD A + EEM K
Sbjct: 605 NAVVDGFCKSGKLDKAYEVLEEMKVK 630
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 121/237 (51%), Gaps = 9/237 (3%)
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
G M+W +F+ E+ +G+ D SY+ + ++CK+G+ +A +L+ +M+ +
Sbjct: 266 GNVDMAW-----KFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVP 320
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
AYNT+I G + + A ++ +++E GC PSVV+ N+++ L + +V EA +
Sbjct: 321 CAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLF 380
Query: 271 AEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
M KK P+ TY+ L K E + D M +G+ P + T +++ + +
Sbjct: 381 EAM-KKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKA 439
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
P + +++ + GC+P+ Y +L+D L KG +D A + E M G +A P
Sbjct: 440 KKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANP 496
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 179/399 (44%), Gaps = 15/399 (3%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A +RALE ++ + + + +++ L + + + L+ +K + P+
Sbjct: 195 ARQPERALELLRQMQ-EVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLE-PDI 252
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFG 126
+ + + A V+ A F++L GLK D+VSY +++ LC+ + EA+EL FG
Sbjct: 253 VLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEEL-FG 311
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
+ + + YN ++ G+ + + +++ +RG + + S++ +
Sbjct: 312 QMETER-----AVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTC 366
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+ K K +A+ L++ MKK + + YN +I + ++ V+ A + EM G P+
Sbjct: 367 LGKKRKVDEALTLFEAMKKDA-EPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPN 425
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFD 303
++T N ++ LC+ + AY + ++GC P+ +TY L K + LF+
Sbjct: 426 LLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFE 485
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
M+++G Y L+R F G ++K+M GC PD N +D + G
Sbjct: 486 NMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAG 545
Query: 364 MLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQS 402
++ R E++ KG P + L+ G Q+
Sbjct: 546 DVEKGRAIFEDI--KGYGFLPDVRSYSILIHGLTKAGQA 582
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 142/315 (45%), Gaps = 22/315 (6%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+P+ ++ I+ A E F+ + + G D +Y +VD C+ + +A E
Sbjct: 563 LPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYE 622
Query: 123 LCFGENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
+ L EM ++ Y I+ G K+ + +EE +G+ +
Sbjct: 623 V------------LEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELN 670
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
+ YS +D K G+ +A + +EM KKG+ +V +N+++ A+ +E ++ A+ ++
Sbjct: 671 VIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQ 730
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR 296
M+EM C P+ T + +I LC + +A+ EM K+G VP+V+TY L K
Sbjct: 731 SMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVG 790
Query: 297 EIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
I LF+R +G P ++ L+ + V+++ GC + A
Sbjct: 791 NITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACI 850
Query: 354 ALVDALIDKGMLDMA 368
+L+DAL L+ A
Sbjct: 851 SLLDALNKAECLEQA 865
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 107/229 (46%), Gaps = 8/229 (3%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TY S+ID L K D ++ L K + N + + + ++EA
Sbjct: 635 TVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIEL-NVIVYSSLIDGFGKVGRIDEAYLI 693
Query: 90 FNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
++ + GL V ++ +L+DAL + + + EA +CF K + S T Y+++
Sbjct: 694 LEEMMKKGLTPNVYTWNSLMDALVKAEEINEAL-ICFQSMKEMKCS-----PNTYTYSIL 747
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G ++ + K FW+EM K+G+V ++ +Y+ + + K G A L++ K G
Sbjct: 748 INGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGG 807
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLL 257
D ++N +I + + A V+ E R GC+ +V C +++ L
Sbjct: 808 TPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDAL 856
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 95/200 (47%), Gaps = 3/200 (1%)
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+Y++ + M ++ +P +A++L ++M++ G ++ V + T++RA+ V+ A+ + E+
Sbjct: 184 AYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEV 243
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP--- 295
+ +P +V N I + G V A+ E+ +G PD ++Y L K
Sbjct: 244 KGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRL 303
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
E LF +M P Y ++ +G G + + +++E GC P ++N++
Sbjct: 304 SEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSI 363
Query: 356 VDALIDKGMLDMARKYDEEM 375
+ L K +D A E M
Sbjct: 364 LTCLGKKRKVDEALTLFEAM 383
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 112/238 (47%), Gaps = 9/238 (3%)
Query: 102 VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKC 161
+Y +++D L + + EA L F E K+ G +E+N +Y+ ++ G+ K+ +
Sbjct: 637 ATYGSIIDGLAKIDRLDEAYML-FEEAKSKG----IELN-VIVYSSLIDGFGKVGRIDEA 690
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
EEM K+G+ ++++++ MD + K+ + +A+ ++ MK+ + Y+ +I
Sbjct: 691 YLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILING 750
Query: 222 VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
+ + + A ++EM++ G P+VVT T+I L + G + +A ++ G PD
Sbjct: 751 LCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPD 810
Query: 282 VITYHCFFRCLE---KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVV 336
+++ + + E +F+ G R + + LL + L VV
Sbjct: 811 AASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQAAVV 868
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 84/187 (44%), Gaps = 3/187 (1%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A ++ M++ + AY +I A+ + + A+ + R+M+E+G + V T+++
Sbjct: 166 AERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVR 225
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRP 312
L GRV A A++ E+ PD++ Y+ C K + F + G++P
Sbjct: 226 ALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKP 285
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
+Y ++ + G L ++ +ME P +AYN ++ G + A K
Sbjct: 286 DDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLL 345
Query: 373 EEMFAKG 379
+++ +G
Sbjct: 346 DQLKERG 352
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 75/183 (40%), Gaps = 7/183 (3%)
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
AYN V+ + S + +V EM +G C ++ L R+ +A V+A M
Sbjct: 116 AYNAVLPFL--SHDLAAMEKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAM 173
Query: 274 PKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
+ P Y + +P L L +M E G + + L+R R G +
Sbjct: 174 RRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRV 233
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGT 390
+ +++ PD YN +D G +DMA K+ E+ ++GL KP + T
Sbjct: 234 EGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGL--KPDDVSYT 291
Query: 391 KLV 393
++
Sbjct: 292 SMI 294
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 175/421 (41%), Gaps = 61/421 (14%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A RALE + T YN+VI + +++ M++ P
Sbjct: 52 CSAGKPARALELLRQMPRPNAVT-----YNTVIAGFCSRGRVQAALDIMREMRERGGIAP 106
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV------------SYCN------- 106
N T+ + + V+EA+ F DE K EV YC+
Sbjct: 107 NQYTYGTVISGWCKVGRVDEAVKVF---DEMLTKGEVKPEAVMYNALIGGYCDQGKLDTA 163
Query: 107 ---------------------LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
LV AL EA EL + +G GL Y
Sbjct: 164 LLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV----EEMGGKGLAP--DVFTY 217
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N+++ G K K E +E M +RGV + +Y+ + + K G+ + KL+ E +
Sbjct: 218 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR 277
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+GI+ D+V YN +I + S +D A + EM + P VT NT+++ LC GRV E
Sbjct: 278 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 337
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLR 322
A ++ EM K+G PD++TY+ ++ L + + M+ G P + TY L++
Sbjct: 338 ARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 397
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ G + K+M E G +PD+ Y +L++ L + R D+E A +A
Sbjct: 398 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTED----ERAIDDERLAAADAA 453
Query: 383 K 383
K
Sbjct: 454 K 454
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 9/209 (4%)
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+++I + +C +GKP +A++L ++M + + V YNTVI V A+ + REM
Sbjct: 43 TFNIMLRHLCSAGKPARALELLRQMPRP----NAVTYNTVIAGFCSRGRVQAALDIMREM 98
Query: 239 REM-GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV-PDVITYHCFFR--CLEK 294
RE G P+ T TVI C+ GRV EA V EM KG V P+ + Y+ C +
Sbjct: 99 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 158
Query: 295 PREILGLF-DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
+ L+ DRM+E G+ + TY +L+ G + + ++M G +PD F YN
Sbjct: 159 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 218
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGLSA 382
L++ +G + A + E M +G+ A
Sbjct: 219 ILINGHCKEGNVKKALEIFENMSRRGVRA 247
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 9/191 (4%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A L+ +M + + + +N ++R + + A+ + R+M +P+ VT NTVI
Sbjct: 25 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIA 80
Query: 256 LLCENGRVREAYAVLAEMPKKGCV-PDVITYHCFFRC---LEKPREILGLFDRMIESG-I 310
C GRV+ A ++ EM ++G + P+ TY + + E + +FD M+ G +
Sbjct: 81 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 140
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
+P+ Y L+ + G L + +M E G + YN LV AL G A +
Sbjct: 141 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 200
Query: 371 YDEEMFAKGLS 381
EEM KGL+
Sbjct: 201 LVEEMGGKGLA 211
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 155/335 (46%), Gaps = 11/335 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN+VI+ L K E D + ++++M D +P+ TF + + + + EA+ +
Sbjct: 337 TYNTVINCLSKNGELDEAKGIVNQMVDR-GCLPDTTTFNTLIVALCSQNRLEEALDLARE 395
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
L GL +V N L++ALC+ L F E K+ G + YN+++
Sbjct: 396 LTVKGLSPDVYTFNILINALCKVGDPHLGIRL-FEEMKSSGCAP-----DEVTYNILIDH 449
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
M + +EM+ G + +Y+ +D +CK + +A +++ +M GI
Sbjct: 450 LCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRS 509
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V +NT+I + ++ +D A + +M + G QPS +T N+++ C+ G +++A +L
Sbjct: 510 AVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILE 569
Query: 272 EMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M G DV+TY L K + L L M GIRP Y +++ R
Sbjct: 570 TMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRN 629
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
LR ++++M E+G PD Y + L G
Sbjct: 630 NLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGG 664
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 152/376 (40%), Gaps = 45/376 (11%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D + AL+ N F + Y +I LG FDL L+ M+
Sbjct: 68 DPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHE-AGAGV 126
Query: 70 FRIMFKRYVTAHLVNEAMGTF-NKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGEN 128
R + Y ++A+ N+L+ FG++ +
Sbjct: 127 VRSFVESYARLRRFDDAVDLVRNQLNTFGVQAD--------------------------- 159
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
T +YN +L + S + EM RG+ D+ + + + +C
Sbjct: 160 -------------TAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALC 206
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
++ + AV + +EM + D + T+++ ++ A+RV +M E GC P+ V
Sbjct: 207 RAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRV 266
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRM 305
T N +I C+ GRV +A + + G PD +TY+ F CL + + L + D M
Sbjct: 267 TVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLM 326
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
++ G P + TY ++ + G L + +M + GC PD +N L+ AL + L
Sbjct: 327 LQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRL 386
Query: 366 DMARKYDEEMFAKGLS 381
+ A E+ KGLS
Sbjct: 387 EEALDLARELTVKGLS 402
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 138/280 (49%), Gaps = 17/280 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDN--PSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
TYN +ID L + + +L+ M+ N P S T+ + + EA F
Sbjct: 442 TYNILIDHLCSMGKLVNALDLLKEMESNGCPRST---VTYNTIIDALCKQMRIEEAEEVF 498
Query: 91 NKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+++D G+ + V++ L+D LC+ K + +A EL + + GL N T YN IL
Sbjct: 499 DQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELI----EQMVKEGLQPSNIT--YNSIL 552
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
+ K K + E M G D+ +Y ++ +CK+G+ A+KL + M+ KGI+
Sbjct: 553 THYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIR 612
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCE-NGRVREAYA 268
AYN VI+++ + A+ ++REM E+G P +T V + LC G ++EA+
Sbjct: 613 PTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFD 672
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIES 308
L EM KG +P+ + FR L + LG+ D +I +
Sbjct: 673 FLVEMVNKGFMPEFSS----FRMLAEGLLNLGMDDYLISA 708
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 138/324 (42%), Gaps = 20/324 (6%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE- 122
P T ++ Y V +A+G K G + D+V+Y V LC+ HV A +
Sbjct: 263 PTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKV 322
Query: 123 ----LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
L G + +V F+ YN ++ K + + +M RG + D
Sbjct: 323 MDLMLQEGHDPDV-FT----------YNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTT 371
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+++ + +C + +A+ L +E+ KG+ DV +N +I A+ +R++ EM
Sbjct: 372 TFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEM 431
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP--- 295
+ GC P VT N +I LC G++ A +L EM GC +TY+ L K
Sbjct: 432 KSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRI 491
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
E +FD+M GI T+ L+ + + + ++M + G P YN++
Sbjct: 492 EEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSI 551
Query: 356 VDALIDKGMLDMARKYDEEMFAKG 379
+ +G L A E M A G
Sbjct: 552 LTHYCKQGDLKKAADILETMTANG 575
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 156/346 (45%), Gaps = 30/346 (8%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+P+ TF + +NEA N++ G D+++Y L++ LC+ V A++
Sbjct: 284 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD 343
Query: 123 LCFGENK------NVGFSGLVEMNKTK--------------------IYNMILRGWFKMS 156
L + K N G V + YN ++ G++K
Sbjct: 344 LFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEG 403
Query: 157 WWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
G E +M +G +++SY+I +D CK GK +A + EM G+K + V +N
Sbjct: 404 LVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFN 463
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
+I A + A+ ++REM GC+P V T N++I LCE ++ A +L +M +
Sbjct: 464 CLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 523
Query: 277 GCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
G V + +TY+ + EI L + M+ G TY L++ R G +
Sbjct: 524 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKA 583
Query: 334 FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+++KM G +P + N L++ L GM++ A ++ +EM +G
Sbjct: 584 RSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 161/344 (46%), Gaps = 11/344 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS+I K L+ ++H M+ N PN ++ I+ + ++EA N+
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMR-NKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNE 449
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ GLK + V + L+ A C+ + EA E+ F E G V + I +
Sbjct: 450 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEI-FREMPRKGCKPDVYTFNSLISGLCEVD 508
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + W +M GVV + +Y+ ++ + G+ +A KL EM +G +D
Sbjct: 509 EIKHALW-----LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ YN++I+ + + VD A ++ +M G PS ++CN +I LC +G V EA
Sbjct: 564 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQK 623
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM +G PD++T++ L + I L +F ++ GI P T+ L+ + G
Sbjct: 624 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
F+ ++ + E G P+ ++ L+ ++I + LD R Y+
Sbjct: 684 FVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRRFYN 727
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 154/402 (38%), Gaps = 75/402 (18%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
++E F+W + + H+ D Y +I LG EF L+ +MKD I+
Sbjct: 94 SMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEG----------IV 143
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGF 133
FK + ++ + D+ G + + L E ++V +
Sbjct: 144 FKESLFISIMRD-------YDKAGFPGQTTRLML-----EMRNVYSCEP----------- 180
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
K YN++L + + +M R + L ++ + M C +
Sbjct: 181 -------TFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEI 233
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
A+ L ++M K G + V Y T+I ++ V+ A+++ EM MGC P T N V
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 293
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK--------------PREIL 299
I LC+ R+ EA ++ M +G PD ITY L K P+ +
Sbjct: 294 ILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEI 353
Query: 300 GLFDRMIES---------------------GIRPKMDTYVMLLRKFGRWGFLRPVFVVWK 338
+F+ +I GI P + TY L+ + + G + V
Sbjct: 354 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLH 413
Query: 339 KMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
M GC P+ ++Y LVD G +D A EM A GL
Sbjct: 414 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 157/359 (43%), Gaps = 16/359 (4%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T +YN V++IL ++ N+ + M P TF ++ K + + ++ A+
Sbjct: 181 TFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIP-PTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 90 FNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
+ + G + + V Y L+ +L + V EA +L + + G V +T +N +
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLL----EEMFLMGCVPDAET--FNDV 293
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G K + + M RG D +Y M+ +CK G+ A L+ + K
Sbjct: 294 ILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKP-- 351
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREM-REMGCQPSVVTCNTVIKLLCENGRVREAY 267
++V +NT+I +D A V +M G P V T N++I + G V A
Sbjct: 352 --EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 268 AVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
VL +M KGC P+V +Y F L K E + + M G++P + L+ F
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAK 383
+ + ++++M GC PD + +N+L+ L + + A +M ++G+ A
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 172/375 (45%), Gaps = 16/375 (4%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
++AL+ F +++ + ++I ILG+ + L+ + M + HA +
Sbjct: 11 RQALQVFRFLQEHLEYELKEHNCVTIISILGREGKLGLAREIFEGMSKAGVAPSVHA-YT 69
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKN 130
+ Y L+ EA F + E G V +Y L++A + + + F E K
Sbjct: 70 ALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINACTKRAYRLPDLVGLFEEMKQ 129
Query: 131 VGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS 190
G V+ N YN ++ +S + + +EM + ++ SY+ ++ + +S
Sbjct: 130 AG----VQPNDI-TYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSLGRS 184
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTC 250
G+ +AV+L++EMK+ G + YN++++A + AM ++ M + GC P + T
Sbjct: 185 GRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTY 244
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK------PREILGLFDR 304
NTVI + G EA V EM +KGC PD +TY+ K R++L R
Sbjct: 245 NTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKR 304
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
+G P + TY +LL G+ G ++ +++ G SP+ +++AL++ G
Sbjct: 305 ---AGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLGY 361
Query: 365 LDMARKYDEEMFAKG 379
+ A + EM A G
Sbjct: 362 FEEAERAWVEMRATG 376
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 111/254 (43%), Gaps = 8/254 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN +++ FD + ++ MK + +PN ++ M + ++EA+ F +
Sbjct: 138 TYNCMVNACVCLSLFDTASQILKEMKA-VNCLPNVISYTTMINSLGRSGRLDEAVELFEE 196
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G + +Y +L+ A +A L G L N + +M RG
Sbjct: 197 MKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNT--VIDMCGRG 254
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + + EM ++G D +Y+ +D K + +A L K MK+ G D
Sbjct: 255 GL----FAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPD 310
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ YN ++ A G + AM+++ E++ G P++V+ + +I + G EA
Sbjct: 311 LWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLGYFEEAERAWV 370
Query: 272 EMPKKGCVPDVITY 285
EM GCVP+ Y
Sbjct: 371 EMRATGCVPNATAY 384
>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
Length = 526
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 143/299 (47%), Gaps = 14/299 (4%)
Query: 85 EAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI 144
+A F++L G+ D SY L++ LC+ EA EL + G
Sbjct: 35 DARHVFDELLRRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCP----PDVVS 90
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y+ ++ G+FK K +D+R + ++ +Y+ + +CK+ KA+++ M
Sbjct: 91 YSTVINGFFKEGDLDKM------LDQR-ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMV 143
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K G+ D + YN+++ S A+ ++MR G +P VVT N+++ LC+NGR
Sbjct: 144 KSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCT 203
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLL 321
EA + M K+G PD+ TY + E+ GL D M+ +GI P + +L+
Sbjct: 204 EARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILV 263
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + + +V+ KM + G +P+ Y ++D L G ++ A Y E+M +GL
Sbjct: 264 CAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGL 322
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 161/406 (39%), Gaps = 111/406 (27%)
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
LD+ + V+Y +++ ALC+ + V +A E+ K SG+ M YN I+ G+
Sbjct: 108 LDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVK----SGV--MPDCMTYNSIVHGF 161
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
+ F ++M GV D+ +Y+ MD +CK+G+ +A K++ M K+G+K D+
Sbjct: 162 CSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDI 221
Query: 213 VAYNTVIR-----------------------------------AVGVSEGVDFAMRVYRE 237
Y T+++ A E V+ AM V+ +
Sbjct: 222 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSK 281
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRC 291
MR+ G P+ VT TVI +LC++GRV +A +M +G PD I Y+ C F
Sbjct: 282 MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDK 341
Query: 292 LEKPREIL--------------------------------GLFDRMIESGIRPKMD---- 315
EK E+ LFD M+ G++P +
Sbjct: 342 WEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGR 401
Query: 316 ---------------------TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
TY ++ G L + ++ ME+ GC+ D N
Sbjct: 402 NDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 461
Query: 355 LVDALIDKGMLDMARKY----DEEMFAKGLSAKPREELGTKLVQGG 396
+V L+ +G + A Y DE+ F+ S L L+ GG
Sbjct: 462 IVRELLQRGEITRAGTYLSMIDEKHFSLEASTA---SLFIDLLSGG 504
>gi|242084014|ref|XP_002442432.1| hypothetical protein SORBIDRAFT_08g020000 [Sorghum bicolor]
gi|241943125|gb|EES16270.1| hypothetical protein SORBIDRAFT_08g020000 [Sorghum bicolor]
Length = 535
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 170/374 (45%), Gaps = 17/374 (4%)
Query: 15 LEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
+ FF+W T+ + T N VI LG+ FD + + M+ N + P+ T I+
Sbjct: 119 VTFFDWAVTNSKPPPSVHTCNIVIRALGRKKFFDFLDDALQIMRRN-NIFPDLTTLEIII 177
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGL------KDEVSYCNLVDALCEYKHVIEAQELCFGEN 128
V A V+ A+ + D+FG + ++ L+ LC HV A L
Sbjct: 178 DSLVAARHVSRAVEVLST-DQFGFGIGKACHKKEAFTVLIRCLCRRSHVGLASSLLQAAR 236
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
K + GL +YN ++ GW + K +E W +M + G+V + S+ ++ +
Sbjct: 237 KEL--LGL----DCNVYNDVMGGWARFGSVDKLQEVWTKMQEDGLVPNEVSHCHLIEGLG 290
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
++G+ A++ ++ M + +AYN +I +D ++ Y++M E C P++
Sbjct: 291 RAGQTEDALREFENMVHERYGPTTMAYNALIFNFISVGDLDSCIKYYKDMLEKNCPPNID 350
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRM 305
T + ++K + RV +A + +M +G +P+ F L P L ++ +
Sbjct: 351 TYSKMVKAFLKGRRVADALQMFDDMLVQGVLPNTGMITSFINPLCTFGPPHAALMIYKKS 410
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
++G + Y +LL + ++G V +W++M+E G PD+ Y +V+ L + G +
Sbjct: 411 RKAGCVISLKAYKLLLERLAKFGKSGIVLDIWEEMQECGYQPDKEIYEFIVNGLCNVGKV 470
Query: 366 DMARKYDEEMFAKG 379
D A EE G
Sbjct: 471 DAAVSVVEESLRNG 484
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 107/235 (45%), Gaps = 37/235 (15%)
Query: 83 VNEAMGTFNKLDEFGL-KDEVSYCNLV----------DALCEYKHVIEAQELCFGENK-- 129
V++ + K+ E GL +EVS+C+L+ DAL E+++++ + +G
Sbjct: 260 VDKLQEVWTKMQEDGLVPNEVSHCHLIEGLGRAGQTEDALREFENMVHER---YGPTTMA 316
Query: 130 ---------NVG--------FSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMD 169
+VG + ++E N Y+ +++ + K + +++M
Sbjct: 317 YNALIFNFISVGDLDSCIKYYKDMLEKNCPPNIDTYSKMVKAFLKGRRVADALQMFDDML 376
Query: 170 KRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVD 229
+GV+ + + +++ +C G P A+ +YK+ +K G + + AY ++ +
Sbjct: 377 VQGVLPNTGMITSFINPLCTFGPPHAALMIYKKSRKAGCVISLKAYKLLLERLAKFGKSG 436
Query: 230 FAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG-CVPDVI 283
+ ++ EM+E G QP ++ LC G+V A +V+ E + G C+ V+
Sbjct: 437 IVLDIWEEMQECGYQPDKEIYEFIVNGLCNVGKVDAAVSVVEESLRNGFCLGRVV 491
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 95/228 (41%), Gaps = 14/228 (6%)
Query: 16 EFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM--KDNPSSIPNHATFRIM 73
EF N V + TT YN++I + D M K+ P PN T+ M
Sbjct: 301 EFENMVHE--RYGPTTMAYNALIFNFISVGDLDSCIKYYKDMLEKNCP---PNIDTYSKM 355
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
K ++ V +A+ F+ + G L + + ++ LC + A + + +++ G
Sbjct: 356 VKAFLKGRRVADALQMFDDMLVQGVLPNTGMITSFINPLCTFGPP-HAALMIYKKSRKAG 414
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
+ K Y ++L K G + WEEM + G D Y ++ +C GK
Sbjct: 415 C-----VISLKAYKLLLERLAKFGKSGIVLDIWEEMQECGYQPDKEIYEFIVNGLCNVGK 469
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
AV + +E + G + V Y+ + + + V+ A ++++++
Sbjct: 470 VDAAVSVVEESLRNGFCLGRVVYSKLNNKLLEMDKVETAYNLFKKVKH 517
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 167/353 (47%), Gaps = 17/353 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+S+ID L K + + ++ M D +PN T+ IM + Y + + EA+ K
Sbjct: 240 TYSSLIDGLCKAQAMNKAEAILQHMFDK-GVMPNTRTYNIMIRGYCSLGQLEEAVRLLKK 298
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK---TKIYNMI 148
+ GL+ D V+Y L+ C+ EA+ + F +V + + IY+++
Sbjct: 299 MSGSGLQPDVVTYILLIQYYCKIGRCAEARSV---------FDSMVRKGQKPNSTIYHIL 349
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
L G+ R+ + M + G+ + +++I + K G KA+ + EM++ G+
Sbjct: 350 LHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGL 409
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ DVV+Y+TVI + V+ A+ + +M G P++++ ++I LC G ++
Sbjct: 410 RPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEE 469
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFG 325
+ EM +G PD I + L K ++ FD +I G++P + +Y L+ +
Sbjct: 470 LAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYC 529
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
G + + +M +G PD + YNAL++ G ++ A EMF K
Sbjct: 530 FVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRK 582
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 152/335 (45%), Gaps = 10/335 (2%)
Query: 66 NHATFRIMFKRYVTAHLVNEAMG-TFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
+ T + K ++AM F ++ E G +V SY L+ LC K EA EL
Sbjct: 128 QNVTLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALEL 187
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ G++ + Y+ I+ G+FK K ++EM +G D+ +YS
Sbjct: 188 LLHMTADGGYNCSPNVVS---YSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSL 244
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D +CK+ KA + + M KG+ + YN +IR ++ A+R+ ++M G
Sbjct: 245 IDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGL 304
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL---G 300
QP VVT +I+ C+ GR EA +V M +KG P+ YH ++
Sbjct: 305 QPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRD 364
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L D MI GI + + +L+ + + G + + +M + G PD +Y+ ++ L
Sbjct: 365 LLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILC 424
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
G ++ A + +M ++GLS P T L+ G
Sbjct: 425 KIGRVEDAVYHFNQMVSEGLS--PNIISFTSLIHG 457
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 149/327 (45%), Gaps = 23/327 (7%)
Query: 64 IP-NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA- 120
IP H F I+ Y V++AM F ++ + GL+ D VSY ++ LC+ V +A
Sbjct: 374 IPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAV 433
Query: 121 ----QELCFGENKNV-GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVK 175
Q + G + N+ F+ L+ G + W K E EM RG+
Sbjct: 434 YHFNQMVSEGLSPNIISFTSLIH------------GLCSIGEWKKVEELAFEMINRGIHP 481
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
D + MD +CK G+ +A + + G+K +VV+YNT+I +D +++ +
Sbjct: 482 DAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQF 541
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP 295
M +G +P T N ++ +NGRV +A A+ EM +K IT + L +
Sbjct: 542 DRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQA 601
Query: 296 REILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
I+ L+ +M++ G + +++TY +L + +++ + D + +
Sbjct: 602 GRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTF 661
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKG 379
N +++AL+ G +D A+ M +G
Sbjct: 662 NIVINALLKVGRIDEAKSLFSAMVLRG 688
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 134/300 (44%), Gaps = 43/300 (14%)
Query: 83 VNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
V EA F+ + G+K + VSY L+D C + E+ + F ++G
Sbjct: 499 VVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQ-FDRMVSIGLR-----PD 552
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
+ YN +L G+FK + EM ++ V + +I + + ++G+ A +LY
Sbjct: 553 SWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYM 612
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
+M +G ++ + YNTV+ + + VD A+R++ ++R + V T N VI L + G
Sbjct: 613 KMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVG 672
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLL 321
R+ EA ++ + M +G VP VITY + IE G+ + D
Sbjct: 673 RIDEAKSLFSAMVLRGPVPHVITYSLMIKS-------------RIEEGLLEESDD----- 714
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY----DEEMFA 377
++ ME+ GC+ D N ++ L++KG + A Y DE+ F+
Sbjct: 715 --------------LFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFS 760
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 108/241 (44%), Gaps = 21/241 (8%)
Query: 164 FWEEMDKRGVVKDLHSYSIYMDIMCK---SGKPWK----AVKLYKEMKKKGIKMDVVAYN 216
++E+ + +H+++ + ++ + S P AV L+ M + G+ M +A N
Sbjct: 36 LFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMARSGVNM--MAAN 93
Query: 217 -----TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY-AVL 270
+IR +D A + +MG + VT N +IK LC+ R +A V
Sbjct: 94 RYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVF 153
Query: 271 AEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESG---IRPKMDTYVMLLRKF 324
MP+ G PDV +Y+ + C+E K +E L L M G P + +Y ++ F
Sbjct: 154 RRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGF 213
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
+ G + + ++ +M G PD Y++L+D L ++ A + MF KG+
Sbjct: 214 FKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNT 273
Query: 385 R 385
R
Sbjct: 274 R 274
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 164/380 (43%), Gaps = 30/380 (7%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
TT T+ L + D + L+ M + +P+ ++ + V EA
Sbjct: 158 TTFTFGVAARALCRLGRADEALALLRGMARH-GCVPDAVLYQTVIHALCDQGGVTEAATL 216
Query: 90 FNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL--------CFGENKNVGF--SGLVE 138
N++ G +V ++ ++V +C V EA L C GF GL
Sbjct: 217 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCR 276
Query: 139 MNKTK---------------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ + ++N ++ G + E +E M +G D H+YSI
Sbjct: 277 VRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSIL 336
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
M +CK G+ AV+L +EM+KKG +VV Y V+ + + D + EM G
Sbjct: 337 MHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGL 396
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILG 300
+ N +I LC++GR+ EA ++ EM +GC PD+ +Y+ L E+ E
Sbjct: 397 TLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEH 456
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+F+ ++E G+ TY ++ R G + + K+M GCS D +YN L+ A+
Sbjct: 457 MFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMC 516
Query: 361 DKGMLDMARKYDEEMFAKGL 380
G +D + EEM KG+
Sbjct: 517 KDGNVDRSLVLLEEMAEKGI 536
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 147/312 (47%), Gaps = 14/312 (4%)
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDE-FGLK----DEVSYCNLVDALCEYKHVIEAQELCFG 126
++F + L + +L E GLK D +Y L+ LC+ + A L
Sbjct: 296 VLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRL-LR 354
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
E + GF+ Y ++L + K W R EEM +G+ + Y+ +
Sbjct: 355 EMEKKGFA-----PNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYA 409
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+CK G+ +A+ L +EM+ +G D+ +YNT+I + +E ++ A ++ + E G +
Sbjct: 410 LCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVAN 469
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFD 303
+T NT+I L +GR ++A + EM GC DV++Y+ + + K + L L +
Sbjct: 470 GITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLE 529
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
M E GI+P +Y +L+ + + +R + K+M G +PD YN L++ L G
Sbjct: 530 EMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMG 589
Query: 364 MLDMARKYDEEM 375
+ A E++
Sbjct: 590 WMHAALNLLEKL 601
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 162/354 (45%), Gaps = 15/354 (4%)
Query: 32 DTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
+T++ V+ + + L+ RM +P T+ + + +EA
Sbjct: 230 NTFDDVVRGMCGLGRVREAARLVDRMMTK-GCMPGVMTYGFLLQGLCRVRQADEARAMLG 288
Query: 92 KLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
++ E + V + ++ + EA EL + +G G T Y++++ G
Sbjct: 289 RVPELNV---VLFNTVIGGCLAEGKLAEATEL----YETMGLKGCQPDAHT--YSILMHG 339
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK-LYKEMKKKGIKM 210
K+ G EM+K+G ++ +Y+I + CK+G W + L +EM KG+ +
Sbjct: 340 LCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGM-WDDTRALLEEMSAKGLTL 398
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
+ YN +I A+ +D AM + +EMR GC P + + NT+I LC N ++ EA +
Sbjct: 399 NSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMF 458
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
+ ++G V + ITY+ L + ++ + L MI G + +Y L++ +
Sbjct: 459 ENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKD 518
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G + V+ ++M E G P+ +YN L+ L + + A + ++M +GL+
Sbjct: 519 GNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLA 572
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 108/237 (45%), Gaps = 34/237 (14%)
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
++ + +C+ G+ +A+ L + M + G D V Y TVI A+ GV A + EM
Sbjct: 161 TFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM 220
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCL 292
MGC V T + V++ +C GRVREA ++ M KGC+P V+TY C R
Sbjct: 221 LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQA 280
Query: 293 EKPREILG----------------------------LFDRMIESGIRPKMDTYVMLLRKF 324
++ R +LG L++ M G +P TY +L+
Sbjct: 281 DEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 340
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ G + + ++ME+ G +P+ Y ++ + GM D R EEM AKGL+
Sbjct: 341 CKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLT 397
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 139/293 (47%), Gaps = 11/293 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+ ++ L K + L+ M+ PN T+ I+ + + ++ +
Sbjct: 332 TYSILMHGLCKLGRIGSAVRLLREMEKK-GFAPNVVTYTIVLHSFCKNGMWDDTRALLEE 390
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ GL + Y ++ ALC+ + EA L E ++ G + + T IY++
Sbjct: 391 MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGL-IQEMRSQGCNPDICSYNTIIYHLCNNE 449
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + +E + + GVV + +Y+ + + + G+ AV+L KEM G +D
Sbjct: 450 QME-----EAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLD 504
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
VV+YN +I+A+ VD ++ + EM E G +P+ V+ N +I LC+ RVR+A +
Sbjct: 505 VVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSK 564
Query: 272 EMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLL 321
+M +G PD++TY+ L K L L +++ + P + TY +L+
Sbjct: 565 QMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 617
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 153/350 (43%), Gaps = 24/350 (6%)
Query: 41 LGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LK 99
L + F L ++HR + P++ TF + + +EA+ + G +
Sbjct: 137 LPRARRFALYRRMVHRDRVPPTTF----TFGVAARALCRLGRADEALALLRGMARHGCVP 192
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWG 159
D V Y ++ ALC+ V EA L N+ + ++N ++ ++RG M G
Sbjct: 193 DAVLYQTVIHALCDQGGVTEAATLL---NEMLLMGCAADVN---TFDDVVRG---MCGLG 243
Query: 160 KCREFWEEMDK---RGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
+ RE +D+ +G + + +Y + +C+ + +A + M + +++VV +N
Sbjct: 244 RVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA----RAMLGRVPELNVVLFN 299
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
TVI + A +Y M GCQP T + ++ LC+ GR+ A +L EM KK
Sbjct: 300 TVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKK 359
Query: 277 GCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
G P+V+TY K + L + M G+ Y ++ + G +
Sbjct: 360 GFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEA 419
Query: 334 FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAK 383
+ ++M GC+PD +YN ++ L + ++ A E + +G+ A
Sbjct: 420 MGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVAN 469
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 103/234 (44%), Gaps = 8/234 (3%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
T + YN +I L K D + LI M+ + P+ ++ + + EA
Sbjct: 396 LTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCN-PDICSYNTIIYHLCNNEQMEEA 454
Query: 87 MGTF-NKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
F N L+E + + ++Y ++ AL +A L K + G ++ Y
Sbjct: 455 EHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLA----KEMILHG-CSLDVVS-Y 508
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N +++ K + EEM ++G+ + SY+I + +CK + A++L K+M
Sbjct: 509 NGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLN 568
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCE 259
+G+ D+V YNT+I + + A+ + ++ P ++T N +I C+
Sbjct: 569 QGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCK 622
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 183/358 (51%), Gaps = 13/358 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+YN++++ + E+D + + R ++ PN T+ I+ K + +A+ +
Sbjct: 118 SYNTLLNAFVELNEWDRAESF-SRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDW 176
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ LK +V SY L++ + + ++ A ++ F E + G+V YNM++ G
Sbjct: 177 MWSQNLKPDVFSYGTLINGMVKVGDLLGALKV-FDE---MSVRGVVA--DVTCYNMLIDG 230
Query: 152 WFKMSWWGKCREFWEEMDKR-GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
+FK + K +E WE + K V ++ +Y+I ++ +CK G+ +++++++ M K +
Sbjct: 231 FFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREK 290
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
D+ Y+++I + + +D A+RVY+E+ E VT N ++ C G+++E++ +
Sbjct: 291 DMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELW 350
Query: 271 AEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
M K+ C V++Y+ + L K E + +++ + + G RP+ TY +L+ +
Sbjct: 351 MVMGKENC-QTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKN 409
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
G L ++K+ E+ D +AY+++VD L +G +D A +M +G P
Sbjct: 410 GRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPH 467
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 166/393 (42%), Gaps = 67/393 (17%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN +ID K ++D + R+ + S PN T+ IM +E++ + ++
Sbjct: 224 YNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERM 283
Query: 94 DEFGL-KDEVSYCNLVDALCE----------YKHVIEAQELCFGENKNVGFSGLVEMNKT 142
+ KD +Y +L+ LCE YK ++E+ + N +G K
Sbjct: 284 TKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKI 343
Query: 143 K------------------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
K YN++++G F+ + WE + K+G + +Y + +
Sbjct: 344 KESFELWMVMGKENCQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLI 403
Query: 185 DIMCKSGKPWKAVKLYKE-----------------------------------MKKKGIK 209
+CK+G+ KA+K++KE M K+G K
Sbjct: 404 HGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYK 463
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
+D N +I + ++ A+ +REM GC P++V+ NT+IK LC+ R EAY+
Sbjct: 464 LDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSF 523
Query: 270 LAEMPKKGCVPDVITYHCFFR--CLEKPREI-LGLFDRMIESGIRPKMDTYVMLLRKFGR 326
+ EM +K PD+IT C EK E+ L L+ + ++ G +P + Y +L+
Sbjct: 524 VKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCS 583
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
L ++ M+ C P+ N L++ L
Sbjct: 584 VCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGL 616
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 138/296 (46%), Gaps = 11/296 (3%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
+ TY +I L K + + + +D P + +A + M ++EA+
Sbjct: 396 STTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYA-YSSMVDGLCKEGRMDEAISIV 454
Query: 91 NKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
N++D+ G K + CN L++ + +A F E + G S + YN ++
Sbjct: 455 NQMDKRGYKLDPHVCNPLINGFVRASKLEDAINF-FREMECKGCSPTIVS-----YNTLI 508
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
+G K + + F +EM ++ D+ + S+ MD +C+ K A+ L+++ KG K
Sbjct: 509 KGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFK 568
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
D+ YN ++ + ++ A+++Y M+ C P++VT NT+++ L + +A +
Sbjct: 569 PDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEI 628
Query: 270 LAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLR 322
+ K G PD+I+Y+ + L + + + + + GI P T+ +L+R
Sbjct: 629 WDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILVR 684
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 87/186 (46%), Gaps = 5/186 (2%)
Query: 195 KAVKLYKEMKKK-GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
KA+ ++ M+ G K V +YNT++ A D A R M P++ T N +
Sbjct: 98 KALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNIL 157
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGI 310
IK+ C+ ++ +A ++L M + PDV +Y + K ++LG +FD M G+
Sbjct: 158 IKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGV 217
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKM-EELGCSPDEFAYNALVDALIDKGMLDMAR 369
+ Y ML+ F + G +W+++ ++ P+ YN +++ L G D +
Sbjct: 218 VADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESL 277
Query: 370 KYDEEM 375
+ E M
Sbjct: 278 EIWERM 283
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 97/217 (44%), Gaps = 11/217 (5%)
Query: 8 ANDWKRALEFFNWVETDCH-FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
A+ + A+ FF E +C + T +YN++I L K F +++ + M + P+
Sbjct: 479 ASKLEDAINFFR--EMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWK-PD 535
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCF 125
T ++ + A+ + + + G K +++ N L+ LC + +A +L
Sbjct: 536 MITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYS 595
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
++ LV N ++ G +K+ + K E W+ + K G+ D+ SY+I +
Sbjct: 596 HMKRSTCVPNLV------TRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIK 649
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+C + A++ + +GI V +N ++RA
Sbjct: 650 GLCSCSRISDAIEFLNDALNRGILPTAVTWNILVRAA 686
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 168/377 (44%), Gaps = 18/377 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C AL F+ + D F TY ++I+ L K + L+ M+ P
Sbjct: 137 CVEGKIGEALHLFDKM-IDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQ-P 194
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALC---EYKHVIEAQ 121
+ + + V EA F+++ G+ ++ +Y +LV ALC E+KHV
Sbjct: 195 DVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLL 254
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
N+ V L ++ I++ ++ K + E + M +RGV D+ +Y+
Sbjct: 255 ------NQMVNSKILPDV---VIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYT 305
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
MD C + +AVK++ M +KG DV++Y T+I +D AM ++ EM
Sbjct: 306 TLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRK 365
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REI 298
P T NT++ LC GR+++A A+ EM +G +PD++TY L K E
Sbjct: 366 EWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEA 425
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+ L + S + P + Y +++ R G L ++ + G P + YN ++
Sbjct: 426 MALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHG 485
Query: 359 LIDKGMLDMARKYDEEM 375
L +G+L+ A K EM
Sbjct: 486 LCKRGLLNEANKLFMEM 502
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 146/320 (45%), Gaps = 10/320 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PN T+ + + A+ +++ + D V Y +++D+LC+ + V EA L
Sbjct: 159 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNL 218
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + G S + Y ++ + W +M ++ D+ +S
Sbjct: 219 -FSQMVGQGISPDI-----FTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTV 272
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D +CK GK +A ++ M ++G++ DVV Y T++ + +D A++V+ M G
Sbjct: 273 VDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 332
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILG 300
P V++ T+I C+ ++ +A + EM +K +PD TY+ L + ++ +
Sbjct: 333 APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIA 392
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
LF M+ G P + TY +LL + L + K +E +PD YN ++D +
Sbjct: 393 LFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMC 452
Query: 361 DKGMLDMARKYDEEMFAKGL 380
G L+ AR + +KGL
Sbjct: 453 RAGELEAARDLFSNLSSKGL 472
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 110/236 (46%), Gaps = 3/236 (1%)
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
+L KM + +MD GV ++++ +I ++ C + A + ++ K G
Sbjct: 62 LLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLG 121
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ D + T+IR + V + A+ ++ +M + G QP+VVT T+I LC+ G A
Sbjct: 122 HQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAI 181
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKF 324
+L M + C PDV+ Y L K R++ LF +M+ GI P + TY L+
Sbjct: 182 RLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHAL 241
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ V + +M PD ++ +VDAL +G + A + + M +G+
Sbjct: 242 CNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGV 297
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 140/332 (42%), Gaps = 20/332 (6%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C +WK N + + +++V+D L K + + ++ M P
Sbjct: 242 CNLCEWKHVTTLLNQM-VNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVE-P 299
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA---- 120
+ T+ + + ++EA+ F+ + G D +SY L++ C+ + +A
Sbjct: 300 DVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLF 359
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+E+C E + TK YN ++ G + + EM RG + DL +Y
Sbjct: 360 EEMCRKE----------WIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTY 409
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
SI +D +CK+ +A+ L K ++ + D+ YN +I + + ++ A ++ +
Sbjct: 410 SILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSS 469
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL- 299
G PSV T N +I LC+ G + EA + EM C PD TY+ R + E L
Sbjct: 470 KGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLR 529
Query: 300 --GLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
L + M+ G + T +L+ G
Sbjct: 530 AIQLLEEMLARGFSADVSTTTLLVEMLSDDGL 561
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 161/410 (39%), Gaps = 70/410 (17%)
Query: 15 LEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
L FF+ + + H + +N++ D L F N + M PS + F +
Sbjct: 17 LPFFSSSQNNFH--SKSLHFNTLDDALSSF-------NRLLHMHPPPSIV----DFAKLL 63
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGF 133
+ + ++D FG+ V N L+++ C V F
Sbjct: 64 TSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRV------------GFAF 111
Query: 134 SGLVEMNK------TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
S L ++ K + ++RG G+ +++M G ++ +Y ++ +
Sbjct: 112 SVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGL 171
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
CK G A++L + M++ + DVV Y ++I ++ V A ++ +M G P +
Sbjct: 172 CKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDI 231
Query: 248 VT--------CN---------------------------TVIKLLCENGRVREAYAVLAE 272
T CN TV+ LC+ G+V EA+ ++
Sbjct: 232 FTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDM 291
Query: 273 MPKKGCVPDVITYHCFF--RCLEKPR-EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M ++G PDV+TY CL+ E + +FD M+ G P + +Y L+ + +
Sbjct: 292 MIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHK 351
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ ++++M PD YN L+ L G L A EM A+G
Sbjct: 352 IDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARG 401
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 3/173 (1%)
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+V + ++ ++ + + + +M G P+V T N +I C RV A++VLA
Sbjct: 56 IVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLA 115
Query: 272 EMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
++ K G PD T+ R C+E K E L LFD+MI+ G +P + TY L+ + G
Sbjct: 116 KILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVG 175
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ + ME+ C PD Y +++D+L + A +M +G+S
Sbjct: 176 NTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGIS 228
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 157/351 (44%), Gaps = 21/351 (5%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
+ V+ + K +FD+ L H+M +N + +F I+ + + A+ K+
Sbjct: 618 FTRVLTAIAKMNKFDIVIYLFHKM-ENLGISHDLYSFTILIHCFCRCSRFSLALALLGKM 676
Query: 94 DEFGLKDE-VSYCNLVDALCEYKHVIEAQELC-----FGENKNVGFSGLVEMNKTKIYNM 147
+ G + V+ +L++ C+ EA L G NV IYN
Sbjct: 677 MKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNV-----------VIYNT 725
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++ G K E + M+K+G+V D +Y+ + +C SG+ A +L ++M K+
Sbjct: 726 VINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRK 785
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
I +V+ + +I + A +Y+EM P+++T N++I C GR+ +A
Sbjct: 786 IDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAK 845
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKF 324
+ M KGC PDV+TY+ K + + + LF M G+ TY L+ +
Sbjct: 846 HMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGY 905
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
+ G L V+ +M + G PD YN L+D L + G ++ A E++
Sbjct: 906 CQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDL 956
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 158/355 (44%), Gaps = 12/355 (3%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
N + + F+ +E + +H ++ +I + F L+ L+ +M P+
Sbjct: 629 NKFDIVIYLFHKME-NLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQ-PSIV 686
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGE 127
T + + + EA+ + + E GL+ V Y +++ LC+ + + A E+ +G
Sbjct: 687 TLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGM 746
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
K G+V T YN ++ G W +M KR + ++ ++ +D
Sbjct: 747 EK----KGIVADAVT--YNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 800
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
K G +A LYKEM ++ + +++ YN++I + + A ++ M GC P V
Sbjct: 801 VKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDV 860
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPREILG-LFDR 304
VT NT+I C++ RV + + EM +G V D TY+ C + +F+R
Sbjct: 861 VTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 920
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
M++ G+ P + TY +LL G + V+ + +++ D YN ++ +
Sbjct: 921 MVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGM 975
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 138/322 (42%), Gaps = 33/322 (10%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
PN + + +N A+ F +++ G+ D V+Y L+ LC +A L
Sbjct: 718 PNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARL 777
Query: 124 CFGENKN------VGFSGLV-----------------EMNKTKI------YNMILRGWFK 154
K + F+ L+ EM + + YN ++ G+
Sbjct: 778 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCI 837
Query: 155 MSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVA 214
G + ++ M +G D+ +Y+ + CKS + +KL+ EM +G+ D
Sbjct: 838 QGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFT 897
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
YNT+I + ++ A +V+ M + G P +VT N ++ LC NG++ +A ++ ++
Sbjct: 898 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 957
Query: 275 KKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
K D+ITY+ + + +K +E LF + G++ Y+ ++ R G R
Sbjct: 958 KNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRR 1017
Query: 332 PVFVVWKKMEELGCSPDEFAYN 353
+ +M+E G P E Y+
Sbjct: 1018 EADKLCTRMKEDGFMPSERIYD 1039
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 109/220 (49%), Gaps = 4/220 (1%)
Query: 164 FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
F ++M+ G+ DL+S++I + C+ + A+ + +M K G +V + +++
Sbjct: 87 FSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFC 146
Query: 224 VSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG-CVPDV 282
+ + A + M + G +P+VV NT+I LC+NG V A +L EM KKG D+
Sbjct: 147 LRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADL 206
Query: 283 ITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
+TY+ L R+ + M + I P + T+ L+ F + G L ++K+
Sbjct: 207 VTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQ 266
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
M + P+ YN+L++ L G L A+K + M +KG
Sbjct: 267 MLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKG 306
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 133/300 (44%), Gaps = 11/300 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ TF + + + +++A + + G + + V Y L+D LC+ V A EL
Sbjct: 133 PSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALEL 192
Query: 124 CFG-ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
E K + LV YN +L G W + +M KR + D+ +++
Sbjct: 193 LNEMEKKGRLAADLVT------YNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTA 246
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D K G +A +LYK+M + I + V YN++I + + + A + + M G
Sbjct: 247 LIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKG 306
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--C-LEKPREIL 299
C P+VVT NT+I C++ RV + + M ++G V D TY+ C + K R
Sbjct: 307 CFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAK 366
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+F M+ G+ P + T+ +LL G + V + M AYN ++ L
Sbjct: 367 DIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGL 426
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 113/240 (47%), Gaps = 7/240 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+ +L KM+ + + +M+ G+ DL+S++I + C+ + A+ L +M
Sbjct: 618 FTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMM 677
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDF--AMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
K G + +V +++ G +G F A+ + M E+G +P+VV NTVI LC+N
Sbjct: 678 KLGFQPSIVTLGSLLN--GFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRD 735
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVM 319
+ A + M KKG V D +TY+ L + L M++ I P + +
Sbjct: 736 LNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTA 795
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L+ F + G L ++K+M P+ YN+L++ +G L A+ + M +KG
Sbjct: 796 LIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKG 855
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 153/341 (44%), Gaps = 13/341 (3%)
Query: 45 FEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVS 103
+FD ++ L M + IP+ F + + + + F+K++ G+ D S
Sbjct: 594 IKFDDAFGLFCEMLQS-RPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYS 652
Query: 104 YCNLVDALCEYKHVIEAQELCFGENKNVGFS-GLVEMNKTKIYNMILRGWFKMSWWGKCR 162
+ L+ C A L G+ +GF +V + +L G+ + + + +
Sbjct: 653 FTILIHCFCRCSRFSLALAL-LGKMMKLGFQPSIVTLGS------LLNGFCQGNRFQEAV 705
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+ M + G+ ++ Y+ ++ +CK+ A++++ M+KKGI D V YNT+I +
Sbjct: 706 SLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGL 765
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
S A R+ R+M + P+V+ +I + G + EA + EM ++ P++
Sbjct: 766 CNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNI 825
Query: 283 ITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
+TY+ C++ + + +FD M+ G P + TY L+ F + + ++ +
Sbjct: 826 LTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCE 885
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
M G D F YN L+ G L++A+K M G+
Sbjct: 886 MTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 926
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 134/321 (41%), Gaps = 52/321 (16%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGE 127
+F I+ + ++ A+ K+ + G V++ +L+ C + +A
Sbjct: 102 SFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDA------- 154
Query: 128 NKNVGFSGLVEMNKTK------IYNMILRGWFKMSWWGKCREFWEEMDKRG-VVKDLHSY 180
FS + M K+ +YN ++ K E EM+K+G + DL +Y
Sbjct: 155 -----FSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTY 209
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ + +C SG+ +A ++ ++M K+ I DV + +I A +D A +Y++M +
Sbjct: 210 NTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQ 269
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG 300
P+ VT N++I LC +GR+ A M KGC P+V+TY+ K R
Sbjct: 270 SSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRR--- 326
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+E G++ ++++M G D F YN L+
Sbjct: 327 -----VEDGMK------------------------LFQRMYREGLVGDTFTYNTLIHGYC 357
Query: 361 DKGMLDMARKYDEEMFAKGLS 381
G L +A+ M + G++
Sbjct: 358 QVGKLRVAKDIFSWMVSCGVT 378
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 135/309 (43%), Gaps = 11/309 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C D ALE N +E TYN+++ L E+ + ++ M + P
Sbjct: 181 CKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRIN-P 239
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELC 124
+ TF + +V ++EA + ++ + + + V+Y +L++ LC + + A++
Sbjct: 240 DVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTF 299
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F +V YN ++ G+ K + ++ M + G+V D +Y+ +
Sbjct: 300 DLMASKGCFPNVVT------YNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLI 353
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
C+ GK A ++ M G+ D++ + ++ + V+ + AM + +MR
Sbjct: 354 HGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKY 413
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF--RCLEKP-REILGL 301
+V N +I LC+ +V EA+ + +P +G PD TY C P RE L
Sbjct: 414 LGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 473
Query: 302 FDRMIESGI 310
F RM E GI
Sbjct: 474 FRRMKEDGI 482
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 140/319 (43%), Gaps = 16/319 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
YN++ID L K + +++ L++ M+ + T+ + + +A
Sbjct: 172 VYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRD 231
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIYNMI 148
+ + + +V ++ L+DA + ++ EAQEL + +++ + T YN +
Sbjct: 232 MTKRRINPDVFTFTALIDAFVKQGNLDEAQEL---------YKQMLQSSIGPNTVTYNSL 282
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G ++ ++ M +G ++ +Y+ ++ CKS + +KL++ M ++G+
Sbjct: 283 INGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGL 342
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
D YNT+I + A ++ M G P ++T ++ LC NG + A
Sbjct: 343 VGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMV 402
Query: 269 VLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+M ++ Y+ L +K E LF R+ G++P TY +++
Sbjct: 403 KFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLC 462
Query: 326 RWGFLRPVFVVWKKMEELG 344
+ G R ++++M+E G
Sbjct: 463 KNGPRREADELFRRMKEDG 481
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 122/276 (44%), Gaps = 11/276 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI- 64
CY+ +W++A + T T+ ++ID K D + L +M SSI
Sbjct: 217 CYSGEWRQAARILRDM-TKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQ--SSIG 273
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL 123
PN T+ + + A TF+ + G + V+Y L++ C+ + V + +L
Sbjct: 274 PNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKL 333
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F G G T YN ++ G+ ++ ++ + M GV D+ ++ I
Sbjct: 334 -FQRMYREGLVG-----DTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCIL 387
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ +C +G+ A+ + +M+ + +VAYN +I + ++ V+ A ++ + G
Sbjct: 388 LHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGV 447
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
+P T +I LC+NG REA + M + G +
Sbjct: 448 KPDARTYTIMILGLCKNGPRREADELFRRMKEDGII 483
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 5/158 (3%)
Query: 229 DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY--- 285
D A ++ EM + PS+V V+ + + + + +M G D+ ++
Sbjct: 597 DDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTIL 656
Query: 286 -HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
HCF RC + L L +M++ G +P + T LL F + + + M ELG
Sbjct: 657 IHCFCRC-SRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELG 715
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
P+ YN +++ L L+ A + M KG+ A
Sbjct: 716 LEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVA 753
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 16/193 (8%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++I K + L M + + + T+ + Y A +N A FN+
Sbjct: 862 TYNTLITGFCKSKRVEDGMKLFCEMT-HQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 920
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI-YNMILR 150
+ + G+ D V+Y L+D LC + +A + KN +M+ I YN+I++
Sbjct: 921 MVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKN-------QMDVDIITYNIIIQ 973
Query: 151 GWFKMSWWGKCREFW---EEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
G M K +E W + ++GV D +Y + +C++G +A KL MK+ G
Sbjct: 974 G---MCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDG 1030
Query: 208 IKMDVVAYNTVIR 220
Y+ +R
Sbjct: 1031 FMPSERIYDETLR 1043
>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
Length = 332
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 120/239 (50%), Gaps = 3/239 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y+ ++ G+FK K + EM + + ++ +Y+ + +CK+ KA+++ M
Sbjct: 15 YSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMV 74
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K G+ D + YN+++ S A+ ++MR G +P VVT N+++ LC+NGR
Sbjct: 75 KSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCT 134
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLL 321
EA + M K+G PD+ TY + E+ GL D M+ +GI P + +L+
Sbjct: 135 EARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILV 194
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + + +V+ KM + G +P+ Y ++D L G ++ A Y E+M +GL
Sbjct: 195 CAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGL 253
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 146/326 (44%), Gaps = 51/326 (15%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNK-LDEFGLKDEVSYCNLVDALCEYKHVIEAQEL 123
P+ ++ + + +++ T+N+ LD+ + V+Y +++ ALC+ + V +A E+
Sbjct: 10 PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEV 69
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
K SG+ M YN I+ G+ + F ++M GV D+ +Y+
Sbjct: 70 LTTMVK----SGV--MPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSL 123
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIR----------------------- 220
MD +CK+G+ +A K++ M K+G+K D+ Y T+++
Sbjct: 124 MDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 183
Query: 221 ------------AVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
A E V+ AM V+ +MR+ G P+ VT TVI +LC++GRV +A
Sbjct: 184 HPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAML 243
Query: 269 VLAEMPKKGCVPDVITYH------CFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLR 322
+M +G PD I Y+ C F EK E LF M++ GI + ++
Sbjct: 244 YFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEE---LFLEMLDRGICLSTIFFNSIID 300
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPD 348
+ G + ++ M +G PD
Sbjct: 301 SHCKEGRVIESVKLFDLMVRIGVKPD 326
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 133/283 (46%), Gaps = 33/283 (11%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS+I L K D + ++ M + +P+ T+ + + ++ EA+ K
Sbjct: 49 TYNSIIAALCKAQTVDKAMEVLTTMVKS-GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKK 107
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGF-----------------S 134
+ G++ D V+Y +L+D LC+ EA+++ F G
Sbjct: 108 MRSDGVEPDVVTYNSLMDYLCKNGRCTEARKI-FDSMTKRGLKPDITTYGTLLQGYATKG 166
Query: 135 GLVEMN-------------KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
LVEM+ ++++++ + K + + +M ++G+ + +Y
Sbjct: 167 ALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYG 226
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+D++CKSG+ A+ +++M +G++ D + YN++I ++ + + + A ++ EM +
Sbjct: 227 TVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDR 286
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
G S + N++I C+ GRV E+ + M + G PD+IT
Sbjct: 287 GICLSTIFFNSIIDSHCKEGRVIESVKLFDLMVRIGVKPDIIT 329
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---L 299
C P VV+ +TVI + G + + Y+ EM K P+V+TY+ L K + + +
Sbjct: 8 CPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAM 67
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ M++SG+ P TY ++ F G + V KKM G PD YN+L+D L
Sbjct: 68 EVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYL 127
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
G ARK + M +GL KP L+QG
Sbjct: 128 CKNGRCTEARKIFDSMTKRGL--KPDITTYGTLLQG 161
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 175/414 (42%), Gaps = 78/414 (18%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTY----------------NSVID---ILGKFFE---- 46
D K AL+FF F H ++Y SVI +LG+ F
Sbjct: 107 DPKSALKFFKEAGARAGFRHAAESYCVLAHILFCGMFYLDARSVIKEWILLGREFPGCDF 166
Query: 47 FDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN 106
FD+ W+ + + P F +F V ++ EA F K+++F + +V CN
Sbjct: 167 FDMLWSTRNVCR------PGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCN 220
Query: 107 LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE 166
E H + K S G F++
Sbjct: 221 ------ELLHRLS----------------------------------KSSKGGLALSFFK 240
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
+M G+ + +Y++ + + + G A L++EMK KG++ D+V YN++I G
Sbjct: 241 DMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVG 300
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
+ A+ V+ EM++ GC+P V+T N++I C+ R+ +A+ L M ++G P+V+TY
Sbjct: 301 MLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYS 360
Query: 287 CFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
K +L F MI G++P TY L+ + G L F + +M++
Sbjct: 361 TLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQA 420
Query: 344 GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA--KPREELGTKLVQG 395
G + + Y AL+D L + G + A EE+F L A +++ T L G
Sbjct: 421 GVNLNIVTYTALLDGLCEDGRMREA----EELFGALLKAGWTLNQQIYTSLFHG 470
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 171/416 (41%), Gaps = 69/416 (16%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS+I+ KF ++ +H MK PN T+ + + A ++ EA F
Sbjct: 323 TYNSLINCFCKFERIPQAFEYLHGMKQRGLQ-PNVVTYSTLIDAFCKAGMLLEANKFFVD 381
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL-----CFGENKNVG-----FSGLVEMNK 141
+ GL+ +E +Y +L+DA C+ + EA +L G N N+ GL E +
Sbjct: 382 MIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGR 441
Query: 142 TK-------------------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL----- 177
+ IY + G+ K K + EEM+K+ + DL
Sbjct: 442 MREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGT 501
Query: 178 ------------------------------HSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
+ Y+ +D K GK +AV L +EM+ G
Sbjct: 502 KIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLG 561
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
IK+ VV Y +I + V A+R + M G QP+++ +I LC+N + EA
Sbjct: 562 IKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAK 621
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKF 324
+ EM KG PD + Y K P E L L +RM+E G+ + Y L+ F
Sbjct: 622 NLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGF 681
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
R+G ++ + +M G PD+ L+ + G ++ A ++M +GL
Sbjct: 682 SRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGL 737
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 165/375 (44%), Gaps = 13/375 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS+ID GK + ++ MKD P+ T+ + + + +A +
Sbjct: 288 TYNSLIDGYGKVGMLTGAVSVFEEMKDAGCE-PDVITYNSLINCFCKFERIPQAFEYLHG 346
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + GL+ + V+Y L+DA C+ ++EA + F + VG Y ++
Sbjct: 347 MKQRGLQPNVVTYSTLIDAFCKAGMLLEANKF-FVDMIRVGLQ-----PNEFTYTSLIDA 400
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K+ + + EM + GV ++ +Y+ +D +C+ G+ +A +L+ + K G ++
Sbjct: 401 NCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLN 460
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
Y ++ ++ ++ AM + EM + +P ++ T I LC + ++ AV+
Sbjct: 461 QQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIR 520
Query: 272 EMPKKGCVPDVITYHCFFRC---LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM G + Y + K E + L M + GI+ + TY +L+ + G
Sbjct: 521 EMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIG 580
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREEL 388
++ + M G P+ Y AL+D L L+ A+ EM KG+S P + +
Sbjct: 581 LVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGIS--PDKLV 638
Query: 389 GTKLVQGGLDGEQSG 403
T L+ G + G
Sbjct: 639 YTSLIDGNMKHGNPG 653
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 170/421 (40%), Gaps = 84/421 (19%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
AL FF + + + TYN VI L + + + + +L MK P+ T+ +
Sbjct: 235 ALSFFKDMVV-AGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLR-PDIVTYNSL 292
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
Y ++ A+ F ++ + G + D ++Y +L++ C+++ + +A E G
Sbjct: 293 IDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHG------ 346
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
M +RG+ ++ +YS +D CK+G
Sbjct: 347 -----------------------------------MKQRGLQPNVVTYSTLIDAFCKAGM 371
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
+A K + +M + G++ + Y ++I A ++ A ++ EM++ G ++VT
Sbjct: 372 LLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTA 431
Query: 253 VIKLLCENGRVRE-----------------------------------AYAVLAEMPKKG 277
++ LCE+GR+RE A +L EM KK
Sbjct: 432 LLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKN 491
Query: 278 CVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
PD++ Y L + EI + + M++ G+ Y L+ + + G
Sbjct: 492 LKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAV 551
Query: 335 VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQ 394
+ ++M++LG Y L+D L G++ A +Y + M GL +P + T L+
Sbjct: 552 NLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGL--QPNIMIYTALID 609
Query: 395 G 395
G
Sbjct: 610 G 610
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 102/239 (42%), Gaps = 8/239 (3%)
Query: 46 EFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSY 104
E + S +I M D + N + + Y EA+ ++ + G+K V+Y
Sbjct: 511 EIEDSMAVIREMMDCGLT-ANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTY 569
Query: 105 CNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREF 164
L+D LC+ V +A +N GL IY ++ G K + +
Sbjct: 570 GVLIDGLCKIGLVQQAVRYFDHMTRN----GL--QPNIMIYTALIDGLCKNDCLEEAKNL 623
Query: 165 WEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGV 224
+ EM +G+ D Y+ +D K G P +A+ L M + G+++D+ AY ++I
Sbjct: 624 FNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSR 683
Query: 225 SEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVI 283
V A + EM G P V C +++ E G + EA A+ +M ++G + I
Sbjct: 684 YGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLISGTI 742
>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 687
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 164/377 (43%), Gaps = 16/377 (4%)
Query: 11 WKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDN--PSSIPNHA 68
W+ A++ V + F +T TYN VID K + + +L+ +M N P+ + +++
Sbjct: 233 WEEAMDLLEEV-IEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYS 291
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGE 127
+ R EAM ++ G+ V SY + +DA + EA +L E
Sbjct: 292 SVIAACGR---GRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDL-LRE 347
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
VG V YN W + E +EM +G+ + SY+ +D
Sbjct: 348 MTTVGLVPTVIS-----YNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDAC 402
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
K G+ KAVKL + M G D++++N+ I A G + + A+ + REM G P+V
Sbjct: 403 AKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNV 462
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE---ILGLFDR 304
+T N+ I+ + R +EA + EMP +G P+V+TY+ K + + L
Sbjct: 463 ITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTG 522
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
M G+ P + +Y + G+ + K M G PD +YN+ V A G
Sbjct: 523 MPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGR 582
Query: 365 LDMARKYDEEMFAKGLS 381
A ++M GL+
Sbjct: 583 WREALGLLKDMATVGLT 599
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 161/379 (42%), Gaps = 20/379 (5%)
Query: 11 WKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
W A++ + T+ +Y+SVI G+ + + +L+ +M+ S PN ++
Sbjct: 268 WLEAMDLLGQMLTN-DIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVS-PNVISY 325
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHV-IEAQELCFGENK 129
EA+ ++ GL V N A C +EA EL K
Sbjct: 326 NSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELL----K 381
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
+ G+ T YN L K W K + M G D+ S++ +D C
Sbjct: 382 EMPAQGIAP--NTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAID-ACG 438
Query: 190 SGKPWK-AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
G+ W+ AV+L +EM G+ +V+ YN+ I A G S AM ++REM G P+VV
Sbjct: 439 RGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVV 498
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE---ILGLFDRM 305
T N++I + + A +L MP +G PDVI+Y+ K + L L M
Sbjct: 499 TYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGM 558
Query: 306 IESGIRPKMDTY---VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
G +P + +Y V K GRW R + K M +G +P+ +Y A + A
Sbjct: 559 PTRGPKPDIISYNSAVTACAKSGRW---REALGLLKDMATVGLTPNTVSYGAAIHACGKG 615
Query: 363 GMLDMARKYDEEMFAKGLS 381
D+A + +EM G +
Sbjct: 616 EQWDVAVRILKEMQTHGAT 634
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 131/290 (45%), Gaps = 17/290 (5%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS--IPN 66
W++A++ + T ++NS ID G+ +++ + L+ M P++ PN
Sbjct: 406 GQWEKAVKLLRGMST-VGSDPDIISFNSAIDACGRGQQWETAVELLREM---PTAGLTPN 461
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCF 125
T+ + + EAMG F ++ GL V +Y +++DA + + A +L
Sbjct: 462 VITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLT 521
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
G ++ YN + K W + + M RG D+ SY+ +
Sbjct: 522 GMPARGVAPDVIS------YNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVT 575
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
KSG+ +A+ L K+M G+ + V+Y I A G E D A+R+ +EM+ G P
Sbjct: 576 ACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATP 635
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY----HCFFRC 291
+++T + I + GR +EA +L ++ ++G PD TY F RC
Sbjct: 636 NLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVISAFQRC 685
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 150/384 (39%), Gaps = 14/384 (3%)
Query: 4 LSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
L DW+ AL + + TT +YN I ++ + L+ M
Sbjct: 84 LEAKGRDWRTALAALDEFKISGGSLDTT-SYNIAIAACSNGRQWATAVRLLREMPTE-GV 141
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKL---DEFGLKDEVSYCNLVDALCEYKHVIEA 120
P+ T+ EAM ++ E D V+Y + + A EA
Sbjct: 142 TPDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEA 201
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+L L+ YN + K W + + EE+ ++G +Y
Sbjct: 202 MDLLEQMVAQGVPPNLI------TYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTY 255
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ +D K G+ +A+ L +M I DV++Y++VI A G AM + +MR
Sbjct: 256 NPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRT 315
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH-CFFRCLEKPR--E 297
G P+V++ N+ I + R +EA +L EM G VP VI+Y+ C R E
Sbjct: 316 QGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVE 375
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
L L M GI P +Y L + G + + M +G PD ++N+ +D
Sbjct: 376 ALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAID 435
Query: 358 ALIDKGMLDMARKYDEEMFAKGLS 381
A + A + EM GL+
Sbjct: 436 ACGRGQQWETAVELLREMPTAGLT 459
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 77/198 (38%), Gaps = 35/198 (17%)
Query: 191 GKPWK-AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
G+ W+ A+ E K G +D +YN I A A+R+ REM G P VVT
Sbjct: 88 GRDWRTALAALDEFKISGGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVT 147
Query: 250 CNTVIKLLCENGRVREAYAVLAEM--PKKGCVPDVITYHCFFRCLEKPREILGLFDRMIE 307
N+ I + GR +EA +L +M P +G PDV+TY+
Sbjct: 148 YNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYN--------------------- 186
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
+ + GRW + + ++M G P+ YN+ + A +
Sbjct: 187 --------SAIAACSNGGRW---KEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEE 235
Query: 368 ARKYDEEMFAKGLSAKPR 385
A EE+ +G R
Sbjct: 236 AMDLLEEVIEQGFPPSTR 253
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 156/362 (43%), Gaps = 29/362 (8%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY ++I+ L K + L+ M+ PN F + V EA F++
Sbjct: 177 TYGTLINGLCKVGNTSAAIRLLRSMEQGNCQ-PNVVVFSTLIDSLCKDRQVTEAFNIFSE 235
Query: 93 LDEFGLKDE-VSYCNLVDALC---EYKHVIEAQELCFGENKNVGFSGLVEMNKTKI---- 144
+ G+ V+Y +L+ LC E+KHV EM +KI
Sbjct: 236 MITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMN---------------EMVDSKIMPDV 280
Query: 145 --YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
N ++ K + + + M RGV ++ +Y+ MD C + AVK++
Sbjct: 281 FTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDT 340
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M K +V++YNT+I + VD AM ++ EM P+ VT NT+I LC GR
Sbjct: 341 MVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGR 400
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVM 319
+++A ++ EM +G +PD++TY L K R + + L + S P + Y
Sbjct: 401 LQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTT 460
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+L R G L ++ + G P+ + YN ++ L +G+L A K EM G
Sbjct: 461 ILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 520
Query: 380 LS 381
S
Sbjct: 521 CS 522
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 151/322 (46%), Gaps = 23/322 (7%)
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNK-LDEFGLKDEVSYCNLVDALCEYKH-----VIE 119
+H TF + + + ++EA+ TFN+ L + V + L+ ++ + KH +
Sbjct: 37 SHNTFH---SKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLS 93
Query: 120 AQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
Q FG +V ++ + +N N R F S K + K G D +
Sbjct: 94 RQMDSFGIPPDV-YTLAIVINSLCHLN---RVDFAFSALAK-------ILKLGHQPDATT 142
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
++ + +C GK +A+ L+ +M +G + +VV Y T+I + A+R+ R M
Sbjct: 143 FTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSME 202
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---R 296
+ CQP+VV +T+I LC++ +V EA+ + +EM KG P+++TY+ L K +
Sbjct: 203 QGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWK 262
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
+ L + M++S I P + T ++ + G + V M G P+ YNAL+
Sbjct: 263 HVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 322
Query: 357 DALIDKGMLDMARKYDEEMFAK 378
D + +D+A K + M K
Sbjct: 323 DGHCLRNEVDVAVKVFDTMVHK 344
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 110/239 (46%), Gaps = 3/239 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+N +L K +MD G+ D+++ +I ++ +C + A ++
Sbjct: 73 FNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKIL 132
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K G + D + T+IR + V + A+ ++ +M G QP+VVT T+I LC+ G
Sbjct: 133 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTS 192
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
A +L M + C P+V+ + L K R++ +F MI GI P + TY L+
Sbjct: 193 AAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLI 252
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + V + +M + PD F N +VDAL +GM+ A + M +G+
Sbjct: 253 HGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 311
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 144/336 (42%), Gaps = 20/336 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDIL---GKFFE-FDLSWNLIHRMKDNP 61
C +WK N + D T N+V+D L G E D+ +IHR +
Sbjct: 256 CKLCEWKHVTTLMNEM-VDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE-- 312
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL-DEFGLKDEVSYCNLVDALCEYKHVIEA 120
PN T+ + + + V+ A+ F+ + + + + +SY L++ C+ + V +A
Sbjct: 313 ---PNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKA 369
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
L F E + T YN ++ G + + EM RG + DL +Y
Sbjct: 370 MYL-FEEMSRQELTP-----NTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTY 423
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
D +CK+ KA+ L K ++ D+ Y T++ + + ++ A ++ +
Sbjct: 424 RTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSS 483
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL- 299
G QP+V T N +I LC+ G + EA + +EM K GC P+ TY+ R + E L
Sbjct: 484 KGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALR 543
Query: 300 --GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
L + M+ G + T +L+ G + V
Sbjct: 544 TIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSV 579
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 3/190 (1%)
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
+A+ + M K V +N ++ ++ ++ + + R+M G P V T VI
Sbjct: 53 EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVI 112
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIR 311
LC RV A++ LA++ K G PD T+ R C+E K E L LFD+MI G +
Sbjct: 113 NSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQ 172
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
P + TY L+ + G + + ME+ C P+ ++ L+D+L + A
Sbjct: 173 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNI 232
Query: 372 DEEMFAKGLS 381
EM KG+S
Sbjct: 233 FSEMITKGIS 242
>gi|297843042|ref|XP_002889402.1| hypothetical protein ARALYDRAFT_470202 [Arabidopsis lyrata subsp.
lyrata]
gi|297335244|gb|EFH65661.1| hypothetical protein ARALYDRAFT_470202 [Arabidopsis lyrata subsp.
lyrata]
Length = 490
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 163/335 (48%), Gaps = 19/335 (5%)
Query: 13 RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
+ LEF+ + F H++ + ++++ ILG+ +FD W ++ K S+ + T ++
Sbjct: 89 QTLEFYRYAGARRGFYHSSFSLDTMLYILGRNRKFDQIWEILIETKRKDRSLISPRTMQV 148
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEF--GLKDEVSYCNLVDALCEYKHVIEAQELCFGENKN 130
+ R V + + +F K D + L+ LC+ K + +A +N
Sbjct: 149 VLGRVAKLCSVRQTVESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDA--------RN 200
Query: 131 VGFSGLVEMNKT-KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
V S + + +N++L GW + F+EEM +G+ D+ +Y+ +D+ CK
Sbjct: 201 VYHSLKHQFQPDLQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCK 257
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
+ KA KL +M+++ DV+ Y T+I +G+ D A V +EM+E GC P V
Sbjct: 258 DREIEKAYKLIDKMREEDETPDVITYTTIIGGLGLIGQPDKAREVLKEMKEYGCYPDVAA 317
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG----LFDRM 305
N I+ C R+ +A ++ EM KKG P+ TY+ FFR L + LG L++RM
Sbjct: 318 YNAAIRNYCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLAND-LGRSWELYERM 376
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
+ +G P + + L++ F R + +W+ M
Sbjct: 377 LGNGCLPNTQSCMFLIKMFKRHEKVDMAMRLWEDM 411
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 77/174 (44%), Gaps = 7/174 (4%)
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
D +N ++R + + + A VY ++ QP + T N LL EA A
Sbjct: 178 DTACFNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNI---LLSGWKSSEEAEAFF 233
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
EM KG PDV+TY+ K REI L D+M E P + TY ++ G
Sbjct: 234 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEDETPDVITYTTIIGGLGLI 293
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G V K+M+E GC PD AYNA + L A K +EM KGLS
Sbjct: 294 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNYCIARRLGDADKLVDEMVKKGLS 347
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 95/228 (41%), Gaps = 48/228 (21%)
Query: 97 GLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK---IYNMILRGW 152
GLK D V+Y +L+D C+ + + +A +L + E ++T Y I+ G
Sbjct: 240 GLKPDVVTYNSLIDVYCKDREIEKAYKL---------IDKMREEDETPDVITYTTIIGGL 290
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
+ K RE +EM + G D+ +Y+ + C + + A KL EM KKG+ +
Sbjct: 291 GLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNYCIARRLGDADKLVDEMVKKGLSPNA 350
Query: 213 VAYNTVIRAVGVS-----------------------------------EGVDFAMRVYRE 237
YN R + ++ E VD AMR++ +
Sbjct: 351 TTYNLFFRVLSLANDLGRSWELYERMLGNGCLPNTQSCMFLIKMFKRHEKVDMAMRLWED 410
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
M G + + ++ LLC+ +V EA L EM +KG P +++
Sbjct: 411 MVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSF 458
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 151/320 (47%), Gaps = 10/320 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQEL 123
PN TF + + V+EA+ +++ E + V N L++ LC V EA L
Sbjct: 137 PNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVL 196
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
++ V + E N+ Y +L K + + +M++R + + YSI
Sbjct: 197 I---DRMVKYG--CEANEIT-YGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIV 250
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D +CK G A+ L+ EM+ KGIK DVVAY+++I + D ++ REM
Sbjct: 251 IDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNI 310
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILG 300
P+VVT + +I + + G++ EA + EM +G PD ITY C E + E
Sbjct: 311 IPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQ 370
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+ D M+ G P + TY +L+ + + + ++ ++ G D YN LV
Sbjct: 371 MLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFC 430
Query: 361 DKGMLDMARKYDEEMFAKGL 380
G L++A++ +EM ++G+
Sbjct: 431 QSGKLNVAKELFQEMVSRGV 450
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 181/383 (47%), Gaps = 34/383 (8%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY V++ + K L+ +L +M++ S + + I+ +++A+ FN+
Sbjct: 211 TYGPVLNRMCKSGNTALALDLFRKMEER-SIKASVVQYSIVIDSLCKDGNLDDALSLFNE 269
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC---FGEN---KNVGFSGLVEM------ 139
++ G+K D V+Y +++ LC + ++ G N V FS L+++
Sbjct: 270 MEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGK 329
Query: 140 -----------------NKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
T Y+ ++ G+ K + G+ + + M +G ++ +YSI
Sbjct: 330 LLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSI 389
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ CK+ + ++L+ E+ KG+ D V YNT+++ S ++ A +++EM G
Sbjct: 390 LINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRG 449
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREIL 299
PSVVT ++ LC+NG +++A + +M K + + Y+ + K +
Sbjct: 450 VPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAW 509
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
LF + G++P + TY +++ + G L ++++KM+E GC+P + YN L+ A
Sbjct: 510 SLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAH 569
Query: 360 IDKGMLDMARKYDEEMFAKGLSA 382
+ + + + EEM +G +A
Sbjct: 570 LGGSGVISSVELIEEMKMRGFAA 592
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 152/333 (45%), Gaps = 29/333 (8%)
Query: 53 LIHRMK-DNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDAL 111
+I R+K N + I + T RI Y ++EA ++ + G+ D + +A+
Sbjct: 2 MIQRLKASNFTQIIDKGTLRISLLHY---SCISEAKVSYKERLRNGIVD----IKVNEAI 54
Query: 112 CEYKHVIEAQELCFGENKNVGFSGLVE-MNKTKIYNMILRGWFKMSWWGKCREFWEEMDK 170
++ +I+++ L + FS L + + K Y+++L F +EMD
Sbjct: 55 DLFESMIQSRPL----PSLIDFSKLFSAVARRKEYDLVL-------------GFCKEMDL 97
Query: 171 RGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF 230
G+ ++++ +I ++ C+ K A + K G + + + ++T+I + V
Sbjct: 98 NGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSE 157
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR 290
A+ + M EM +P+VVT NT+I LC GRV EA ++ M K GC + ITY
Sbjct: 158 AVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLN 217
Query: 291 CLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
+ K L LF +M E I+ + Y +++ + G L ++ +ME G
Sbjct: 218 RMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKA 277
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
D AY++++ L + G D K EM + +
Sbjct: 278 DVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNI 310
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 114/255 (44%), Gaps = 8/255 (3%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T TY+S+ID K + ++ M PN T+ I+ Y A V+ M F
Sbjct: 349 TITYSSLIDGFCKENRLGEANQMLDLMVSKGCE-PNIVTYSILINSYCKAKRVDNGMRLF 407
Query: 91 NKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
++ GL D V+Y LV C+ + A+EL F E + G V Y ++L
Sbjct: 408 CEISSKGLVADTVTYNTLVQGFCQSGKLNVAKEL-FQEMVSRGVPPSV-----VTYGILL 461
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G K E +E+M K ++ + Y+I + MC + K A L+ + KG+K
Sbjct: 462 DGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVK 521
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
DV+ YN +I + + A ++R+M+E GC PS T N +I+ V + +
Sbjct: 522 PDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVEL 581
Query: 270 LAEMPKKGCVPDVIT 284
+ EM +G D T
Sbjct: 582 IEEMKMRGFAADAST 596
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 3/185 (1%)
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
KEM GI+ ++ N +I + FA V + G +P+ +T +T+I C
Sbjct: 93 KEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLE 152
Query: 261 GRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTY 317
GRV EA A++ M + P+V+T + CL+ + E L L DRM++ G TY
Sbjct: 153 GRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITY 212
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
+L + + G +++KMEE Y+ ++D+L G LD A EM
Sbjct: 213 GPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEM 272
Query: 378 KGLSA 382
KG+ A
Sbjct: 273 KGIKA 277
>gi|224128023|ref|XP_002329235.1| predicted protein [Populus trichocarpa]
gi|222871016|gb|EEF08147.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 144/317 (45%), Gaps = 34/317 (10%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PN T I+ + V+ K+ + GL+ D V + L++ LC+ +A EL
Sbjct: 118 PNTYTLNILINCFCKLQHVDLGFSVLAKVIKLGLQPDVVPFTTLINGLCKVGKFSQAVEL 177
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F E G YN ++ G S W + EM ++ D+ ++++
Sbjct: 178 -FDETVERG------------YNSLIHGLCNCSQWKEASAILNEMTSLNIMPDIVTFNVL 224
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D CK GK +A + K M + +++DVV YN+++ + V A +++ M GC
Sbjct: 225 VDTFCKEGKVSEAQGVLKTMTEMSVELDVVTYNSLMYGHSLWMEVVEARKLFGFMITKGC 284
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC-LEKPREILGLF 302
+P+V + N +I C+ + EA + EM +G P++++Y+ C L K RE L
Sbjct: 285 KPNVFSYNILINGYCKAEMIDEAKQLFNEMIHQGLTPNIVSYNTHGFCQLGKLREAQELN 344
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWG-------------------FLRPVFVVWKKMEEL 343
+ M +G P + TY +LL F + G L ++KMEE
Sbjct: 345 ENMHTNGNLPDLCTYSILLDGFCKQGNHIAARKLFSELFVQGLQRLLDEALETFRKMEED 404
Query: 344 GCSPDEFAYNALVDALI 360
GC P+E++YN ++ +
Sbjct: 405 GCPPNEWSYNVIIRGFL 421
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 123/293 (41%), Gaps = 30/293 (10%)
Query: 107 LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGK 160
L++ C+ +HV ++GFS L ++ K + + ++ G K+ + +
Sbjct: 126 LINCFCKLQHV------------DLGFSVLAKVIKLGLQPDVVPFTTLINGLCKVGKFSQ 173
Query: 161 CREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIR 220
E ++E +RG +H +C + +A + EM I D+V +N ++
Sbjct: 174 AVELFDETVERGYNSLIHG-------LCNCSQWKEASAILNEMTSLNIMPDIVTFNVLVD 226
Query: 221 AVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVP 280
V A V + M EM + VVT N+++ V EA + M KGC P
Sbjct: 227 TFCKEGKVSEAQGVLKTMTEMSVELDVVTYNSLMYGHSLWMEVVEARKLFGFMITKGCKP 286
Query: 281 DVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVW 337
+V +Y+ K E LF+ MI G+ P + +Y F + G LR +
Sbjct: 287 NVFSYNILINGYCKAEMIDEAKQLFNEMIHQGLTPNIVSYNT--HGFCQLGKLREAQELN 344
Query: 338 KKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGT 390
+ M G PD Y+ L+D +G ARK E+F +GL E L T
Sbjct: 345 ENMHTNGNLPDLCTYSILLDGFCKQGNHIAARKLFSELFVQGLQRLLDEALET 397
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 123/283 (43%), Gaps = 27/283 (9%)
Query: 103 SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKM-SWWGKC 161
S+ N+ DAL + H++ + L +++ K +L KM ++
Sbjct: 61 SFRNIDDALASFNHMLHRKPL----------PCIIQFTK------LLSAIVKMRQYYDAV 104
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
M+ G+ + ++ +I ++ CK + ++ K G++ DVV + T+I
Sbjct: 105 ISLSRPMELAGLSPNTYTLNILINCFCKLQHVDLGFSVLAKVIKLGLQPDVVPFTTLING 164
Query: 222 VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
+ A+ ++ E E G N++I LC + +EA A+L EM +PD
Sbjct: 165 LCKVGKFSQAVELFDETVERGY-------NSLIHGLCNCSQWKEASAILNEMTSLNIMPD 217
Query: 282 VITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWK 338
++T++ C E K E G+ M E + + TY L+ W + ++
Sbjct: 218 IVTFNVLVDTFCKEGKVSEAQGVLKTMTEMSVELDVVTYNSLMYGHSLWMEVVEARKLFG 277
Query: 339 KMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
M GC P+ F+YN L++ M+D A++ EM +GL+
Sbjct: 278 FMITKGCKPNVFSYNILINGYCKAEMIDEAKQLFNEMIHQGLT 320
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 27/273 (9%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + WK A N + T + T+N ++D K + + ++ M + +
Sbjct: 194 CNCSQWKEASAILNEM-TSLNIMPDIVTFNVLVDTFCKEGKVSEAQGVLKTMTEMSVELD 252
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELC 124
+M+ + +V EA F + G K V SY L++ C+ + + EA++L
Sbjct: 253 VVTYNSLMYGHSLWMEVV-EARKLFGFMITKGCKPNVFSYNILINGYCKAEMIDEAKQL- 310
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F E + G + I + G+ ++ + +E E M G + DL +YSI +
Sbjct: 311 FNEMIHQGLT-------PNIVSYNTHGFCQLGKLREAQELNENMHTNGNLPDLCTYSILL 363
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D CK G A KL+ E+ +G++ +D A+ +R+M E GC
Sbjct: 364 DGFCKQGNHIAARKLFSELFVQGLQ----------------RLLDEALETFRKMEEDGCP 407
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
P+ + N +I+ + A ++ EM +G
Sbjct: 408 PNEWSYNVIIRGFLRHRDESRAVQLIGEMRDRG 440
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 177/400 (44%), Gaps = 25/400 (6%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C K+ALE + + D + T+ +ID L K E + + M + +P
Sbjct: 274 CKIAHVKKALELYQEMLGDGLLPNVV-TFGILIDGLCKTDEMVSARKFLIDMA-SFGVVP 331
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELC 124
N + + Y A ++EA+ +++++ L D +Y L+ LC + EA L
Sbjct: 332 NIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL- 390
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
E K GF + YN ++ G+ K K E +M ++G+ ++ ++S +
Sbjct: 391 LQEMKKKGF-----LPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLI 445
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D CK+GK A+ LY EM KG+ DVVAY +I A R+++EM+E G
Sbjct: 446 DGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLH 505
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLA-------------EMPKKGCVPDVITYHCFFRC 291
P+V T + +I LC++GR+ +A + E+ + C P+ + Y +
Sbjct: 506 PNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQG 565
Query: 292 LEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
L I F M SG+RP + T +++++ R LR V ++ + ++G P+
Sbjct: 566 LCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPN 625
Query: 349 EFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREEL 388
Y L + G L A + E++ G+ +L
Sbjct: 626 SSVYRVLAKGYEESGYLKSALRCSEDLSGIGIGCSNLNDL 665
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 162/357 (45%), Gaps = 25/357 (7%)
Query: 56 RMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEY 114
R N +PN T+ M Y V +A+ + ++ GL + V++ L+D LC+
Sbjct: 252 RTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKT 311
Query: 115 KHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVV 174
++ A++ ++ G+V +YN ++ G+ K + E++K ++
Sbjct: 312 DEMVSARKFLI----DMASFGVVP--NIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEIL 365
Query: 175 KDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRV 234
D+ +YSI + +C + +A L +EMKKKG + V YNT+I ++ A+ V
Sbjct: 366 PDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEV 425
Query: 235 YREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
+M E G +P+++T +T+I C+ G++ A + EM KG +PDV+ Y K
Sbjct: 426 CSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFK 485
Query: 295 ---PREILGLFDRMIESGIRPKMDTYVML---LRKFGRWGFLRPVFVVWKKMEELG---- 344
+E L M E+G+ P + T L L K GR +F+ + G
Sbjct: 486 DGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTN 545
Query: 345 ------CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
CSP+ Y AL+ L G + A K+ +M GL +P ++QG
Sbjct: 546 ELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGL--RPDVFTCIVIIQG 600
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 129/285 (45%), Gaps = 15/285 (5%)
Query: 102 VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVE---MNKTKIYNMILRGWFKMSWW 158
V+Y L+D C ++A L F ++E IY +++RG S
Sbjct: 194 VTYGTLIDGCCRQGDFLKAFRL---------FDEMIEKKIFPTVVIYTILIRGLCGESRI 244
Query: 159 GKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTV 218
+ + M G++ +L++Y+ MD CK KA++LY+EM G+ +VV + +
Sbjct: 245 SEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGIL 304
Query: 219 IRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGC 278
I + ++ + A + +M G P++ N +I C+ G + EA ++ +E+ K
Sbjct: 305 IDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEI 364
Query: 279 VPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFV 335
+PDV TY + L ++ E GL M + G P TY L+ + + G +
Sbjct: 365 LPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIE 424
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
V +M E G P+ ++ L+D G ++ A EM KGL
Sbjct: 425 VCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 112/238 (47%), Gaps = 5/238 (2%)
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
NM+L G K + + + +M RG ++ +Y +D C+ G KA +L+ EM +
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
K I VV Y +IR + + A ++R MR G P++ T NT++ C+ V++
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG----LFDRMIESGIRPKMDTYVMLL 321
A + EM G +P+V+T+ L K E++ L D M G+ P + Y L+
Sbjct: 282 ALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLID-MASFGVVPNIFVYNCLI 340
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ + G L + ++E+ PD F Y+ L+ L ++ A +EM KG
Sbjct: 341 DGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 7/211 (3%)
Query: 170 KRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVD 229
K V+ + + ++ +D + K G+ K+Y +M +G +VV Y T+I G D
Sbjct: 151 KMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLID--GCCRQGD 208
Query: 230 F--AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
F A R++ EM E P+VV +I+ LC R+ EA ++ M G +P++ TY+
Sbjct: 209 FLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNT 268
Query: 288 FFR--C-LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
C + ++ L L+ M+ G+ P + T+ +L+ + + M G
Sbjct: 269 MMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFG 328
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
P+ F YN L+D G L A E+
Sbjct: 329 VVPNIFVYNCLIDGYCKAGNLSEALSLHSEI 359
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 7/179 (3%)
Query: 209 KMDVV----AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
KMDV+ A N V+ + D +VY +M G P+VVT T+I C G
Sbjct: 151 KMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLL 321
+A+ + EM +K P V+ Y R L + E +F M SG+ P + TY ++
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + ++ ++++M G P+ + L+D L + ARK+ +M + G+
Sbjct: 271 DGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGV 329
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 150/356 (42%), Gaps = 45/356 (12%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ TF + + + EA+ F+K+ G + + V+Y L++ LC+ + V EA +
Sbjct: 113 PDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNI 172
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F E G S YN ++ G K+ W EM ++ D+ + +
Sbjct: 173 -FSEMITKGISP-----NIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 226
Query: 184 MDIMCKSGKPWKA-----------------------------------VKLYKEMKKKGI 208
+D +CK G +A VK++ M K
Sbjct: 227 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 286
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+V++YNT+I + VD AM ++ EM P+ VT NT+I LC GR+++A +
Sbjct: 287 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 346
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ EM +G +PD++TY L K R + + L + S P + Y +L
Sbjct: 347 LFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMC 406
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
R G L ++ + G P+ + YN ++ L +G+L A K EM G S
Sbjct: 407 RAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCS 462
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 174/405 (42%), Gaps = 27/405 (6%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
N AL FN + H +T + ++ + K + +L +M D+ P+
Sbjct: 560 NTLDDALSSFNRM-LHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQM-DSFGIPPDVY 617
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCE------------YK 115
T I+ + + A KL + G + D V+Y L++ LC+ Y
Sbjct: 618 TLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYN 677
Query: 116 HVIEAQ-ELCFGENKNVGFSGLVE---MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKR 171
+I A LC ++ + +V M +++ ++ K + + M KR
Sbjct: 678 SLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKR 737
Query: 172 GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFA 231
GV D+ +Y+ MD C + +AVK++ M KG +V +YN +I + +D A
Sbjct: 738 GVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKA 797
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC 291
M + +M G VT NT+I LC GR++ A A+ EM G +PD++TY
Sbjct: 798 MGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDY 857
Query: 292 LEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
L K E + L + S + + Y + + R G L ++ + G PD
Sbjct: 858 LCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 917
Query: 349 EFAYNALVDALIDKGMLDMA----RKYDE-EMFAKGLSAKPREEL 388
YN ++ L +G+LD A RK DE ++++ S++ ++ L
Sbjct: 918 VRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTSSRNQKSL 962
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 113/237 (47%), Gaps = 3/237 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+N +L K +MD G+ D+++ +I ++ +C + A ++
Sbjct: 48 FNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKIL 107
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K G + D + T+IR + V + A+ ++ +M G QP+VVT T+I LC++ +V
Sbjct: 108 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVT 167
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLL 321
EA+ + +EM KG P+++TY+ L K + + L + M++S I P + T ++
Sbjct: 168 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV 227
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+ G + V M G P+ YNAL+D + +D+A K + M K
Sbjct: 228 DALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 284
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 144/336 (42%), Gaps = 20/336 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDIL---GKFFE-FDLSWNLIHRMKDNP 61
C +WK N + D T N+V+D L G E D+ +IHR +
Sbjct: 196 CKLCEWKHVTTLMNEM-VDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE-- 252
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL-DEFGLKDEVSYCNLVDALCEYKHVIEA 120
PN T+ + + + V+ A+ F+ + + + + +SY L++ C+ + V +A
Sbjct: 253 ---PNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKA 309
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
L F E + T YN ++ G + + EM RG + DL +Y
Sbjct: 310 MYL-FEEMSRQELTP-----NTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTY 363
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
D +CK+ KA+ L K ++ D+ Y T++ + + ++ A ++ +
Sbjct: 364 RTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSS 423
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL- 299
G QP+V T N +I LC+ G + EA + +EM K GC P+ TY+ R + E L
Sbjct: 424 KGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALR 483
Query: 300 --GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
L + M+ G + T +L+ G + V
Sbjct: 484 TIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSV 519
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
+A+ + M K V +N ++ ++ ++ + + R+M G P V T VI
Sbjct: 28 EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVI 87
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIR 311
LC RV A++ LA++ K G PD T+ R C+E K E L LFD+MI G +
Sbjct: 88 NSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQ 147
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
P + TY L+ + + F ++ +M G SP+ YN+L+ L
Sbjct: 148 PNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGL 195
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 160/410 (39%), Gaps = 66/410 (16%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY ++ D L K D + L+ ++ + P+ + + A + +A F+
Sbjct: 362 TYRTLSDYLCKNRHLDKAMALLKAIEGSNWD-PDIQIYTTILDGMCRAGELEDARDLFSN 420
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
L GL+ V +Y ++ LC+ + EA +L NKN G + T YN+I RG
Sbjct: 421 LSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKN----GCSPNDCT--YNLITRG 474
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM-------------DIMCK---SGKPW- 194
+ + + + E EEM RG D+ + ++ + I+CK S +P
Sbjct: 475 FLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSG 534
Query: 195 -----------------------------KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVS 225
A+ + M V + ++ ++
Sbjct: 535 TQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKM 594
Query: 226 EGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
+ + + +M G P V T N +I C R+ A++VLA++ K G PDV+TY
Sbjct: 595 KHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTY 654
Query: 286 HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
L K MI GI P + TY L+ + V + +M
Sbjct: 655 GTLMNGLCK----------MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKI 704
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
P+ ++ +VDAL +GM+ +A + M +G+ +P T L+ G
Sbjct: 705 MPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGV--EPDVVTYTALMDG 752
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 59/157 (37%), Gaps = 3/157 (1%)
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
+D A+ + M PS V N ++ + + ++ +M G PDV T
Sbjct: 26 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85
Query: 288 FFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
L + ++++ G +P T+ L+R G + ++ KM G
Sbjct: 86 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
P+ Y L++ L + A EM KG+S
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGIS 182
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 168/369 (45%), Gaps = 13/369 (3%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKR 76
F +E D T YN + +L K + L L +M + + P+ +TF I+ +
Sbjct: 150 LFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVAD-AVPPDVSTFNILIRA 208
Query: 77 YVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSG 135
AH + A+ + +GL+ DE ++ L+ E V A + K +
Sbjct: 209 LCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRI-----KELMVES 263
Query: 136 LVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK 195
E+ + N+++ G K + F E + G D +++ ++ +C++G +
Sbjct: 264 GCELTSVSV-NVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQ 320
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
+++ M +KG ++DV YN++I + +D A+ + M C+P+ VT NT+I
Sbjct: 321 GLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIG 380
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPREI-LGLFDRMIESGIRP 312
LC+ V A + + KG +PDV T++ + CL REI + LF+ M E G P
Sbjct: 381 TLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDP 440
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
TY +L+ L+ ++ K+ME GC+ + YN L+D L + A
Sbjct: 441 DEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIF 500
Query: 373 EEMFAKGLS 381
++M G+S
Sbjct: 501 DQMEMLGVS 509
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 143/325 (44%), Gaps = 46/325 (14%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQELC-FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWW 158
D+V++ LV+ LC H+ + E+ F K GF E++ YN ++ G K+
Sbjct: 301 DQVTFNALVNGLCRTGHIKQGLEMMDFMLEK--GF----ELD-VYTYNSLISGLCKLGEI 353
Query: 159 GKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTV 218
+ E M R + +Y+ + +CK A +L + + KG+ DV +N++
Sbjct: 354 DEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSL 413
Query: 219 IRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGC 278
I+ + ++ + AM ++ EM+E GC P T + +I+ LC R++EA +L EM GC
Sbjct: 414 IQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGC 473
Query: 279 VPDVITYHCFFRCLEKPR------------EILG-------------------------- 300
+V+ Y+ L K E+LG
Sbjct: 474 ARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQ 533
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L D+MI G++P TY +L+ F + G ++ + + M GC PD Y L+ L
Sbjct: 534 LMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLC 593
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPR 385
G +D+A K + KG+ P+
Sbjct: 594 KAGRVDVASKLLRSVQMKGMVLTPQ 618
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 138/290 (47%), Gaps = 12/290 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+NS+I L +++ L MK+ P+ T+ I+ + + + EA+ +
Sbjct: 409 TFNSLIQGLCLTSNREIAMELFEEMKEKGCD-PDEFTYSILIESLCSERRLKEALMLLKE 467
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
++ G ++ V Y L+D LC+ V +A+++ F + + +G S + YN ++ G
Sbjct: 468 MELSGCARNVVVYNTLIDGLCKNNRVGDAEDI-FDQMEMLGVS-----RSSVTYNTLING 521
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + + ++M G+ D +Y+ + C+ G +A + + M G + D
Sbjct: 522 LCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPD 581
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+V Y T+I + + VD A ++ R ++ G + N VI+ LC+ R +EA +
Sbjct: 582 IVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFR 641
Query: 272 EMPKKGCVPDVITYHCFFRCL----EKPREILGLFDRMIESGIRPKMDTY 317
EM +KG PDVITY FR L +E + M+E GI P+ ++
Sbjct: 642 EMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSF 691
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 163/340 (47%), Gaps = 22/340 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY S+I L K + D ++ L+ M+D P A + K A +A+G F
Sbjct: 32 TYGSLIHGLCKAGKLDQAYELLDEMRDRGIP-PGVAVHNGVIKGLCKAGRFGDALGYFKT 90
Query: 93 LDEFGLK---DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+ G K D +++ LVDAL + V EA ++ E+ + L Y ++
Sbjct: 91 V--AGTKCTPDIITFNILVDALVKSGRVEEAFQI--FESMHTSSQCL---PNVVTYTTVI 143
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G K + E + M++ G ++ +YS+ ++ +CK+G+ K L +EM ++G +
Sbjct: 144 NGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQ 203
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
DV+ YNT++ + S +D A+ + + M GC P+VVT N++++L C + +V A+ +
Sbjct: 204 PDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRL 263
Query: 270 LAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLL----- 321
+ M ++GC PDVI Y+ L + + L +M+ + P + TY ++
Sbjct: 264 IQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCK 323
Query: 322 --RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
R W L + + M++ GC P+ Y +++ L
Sbjct: 324 DWRVDADWK-LEAACEILEMMKQTGCPPNAGTYAVVIEGL 362
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 4/210 (1%)
Query: 174 VKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMR 233
V + +Y + +CK+GK +A +L EM+ +GI V +N VI+ + + A+
Sbjct: 27 VPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALG 86
Query: 234 VYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM-PKKGCVPDVITYHCFFRCL 292
++ + C P ++T N ++ L ++GRV EA+ + M C+P+V+TY L
Sbjct: 87 YFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGL 146
Query: 293 EKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE 349
K ++ + L D M E+G P + TY +L+ + G F + ++M G PD
Sbjct: 147 CKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDV 206
Query: 350 FAYNALVDALIDKGMLDMARKYDEEMFAKG 379
YN L++ L LD A + + M G
Sbjct: 207 IMYNTLLNGLCKSRRLDEALELVQLMIRSG 236
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 167/409 (40%), Gaps = 41/409 (10%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
+ A + F + T TY +VI+ L K + D + L+ M + PN T+
Sbjct: 117 EEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNET-GCCPNVITYS 175
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL------- 123
++ + A ++ ++ G + D + Y L++ LC+ + + EA EL
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRS 235
Query: 124 ----------------CFGENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKC 161
C + + F + M++ YN ++ G + +
Sbjct: 236 GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDA 295
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKS---GKPWK---AVKLYKEMKKKGIKMDVVAY 215
+ ++M V D+ +YS +D +CK WK A ++ + MK+ G + Y
Sbjct: 296 QALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTY 355
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
VI + + A+ + R M + P + + + VI LC++ + AY + M +
Sbjct: 356 AVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSE 415
Query: 276 KGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
+ C P+ + Y L K E+ + +F+ M+ES RP + TY +L G +
Sbjct: 416 RECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEE 474
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ + M C PD +Y AL+ L ++ A + + + AKG +
Sbjct: 475 AVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFA 523
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 155/355 (43%), Gaps = 16/355 (4%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN++++ L K D + L+ M + P T+ + + + + V+ A +
Sbjct: 209 YNTLLNGLCKSRRLDEALELVQLMIRS-GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM 267
Query: 94 DEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVE--MNKTKIYNMILR 150
E G D ++Y ++ LC + +AQ L K + + V + + I + + +
Sbjct: 268 SERGCPPDVINYNTVIAGLCRDARLDDAQALL----KQMVAARCVPDVITYSTIIDGLCK 323
Query: 151 GWFKMSWW---GKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
W + W C E E M + G + +Y++ ++ +C++ K +A+ L + M
Sbjct: 324 DWRVDADWKLEAAC-EILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSE 382
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ D+ +++ VI ++ S +D A +++ M E C+P+ V +I L + G V +A
Sbjct: 383 VVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAV 442
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
V E+ + P V TY+ L + E + + + MI P +Y L+R
Sbjct: 443 RVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGL 501
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R + + +++ +E G + + YN LV+ L K L A ++ G
Sbjct: 502 CRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 82/205 (40%), Gaps = 46/205 (22%)
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
A N ++RA + A++++RE R C P+ T ++I LC+ G++ +AY +L EM
Sbjct: 4 ALNLLVRAGQHGQ----AVQLFREER---CVPNEFTYGSLIHGLCKAGKLDQAYELLDEM 56
Query: 274 PKKG-----------------------------------CVPDVITYHCFFRCLEKP--- 295
+G C PD+IT++ L K
Sbjct: 57 RDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRV 116
Query: 296 REILGLFDRM-IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
E +F+ M S P + TY ++ + G L + M E GC P+ Y+
Sbjct: 117 EEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSV 176
Query: 355 LVDALIDKGMLDMARKYDEEMFAKG 379
LV+ L G D +EM +G
Sbjct: 177 LVEGLCKAGRTDKGFTLLQEMTRRG 201
>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 401
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 143/299 (47%), Gaps = 14/299 (4%)
Query: 85 EAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI 144
+A F++L G+ D SY L++ LC+ EA EL + G
Sbjct: 35 DARHVFDELLRRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCP----PDVVS 90
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y+ ++ G+FK K +D+R + ++ +Y+ + +CK+ KA+++ M
Sbjct: 91 YSTVINGFFKEGDLDKM------LDQR-ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMV 143
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K G+ D + YN+++ S A+ ++MR G +P VVT N+++ LC+NGR
Sbjct: 144 KSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCT 203
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLL 321
EA + M K+G PD+ TY + E+ GL D M+ +GI P + +L+
Sbjct: 204 EARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILV 263
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + + +V+ KM + G +P+ Y ++D L G ++ A Y E+M +GL
Sbjct: 264 CAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGL 322
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 133/297 (44%), Gaps = 50/297 (16%)
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
LD+ + V+Y +++ ALC+ + V +A E+ K SG+ M YN I+ G+
Sbjct: 108 LDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVK----SGV--MPDCMTYNSIVHGF 161
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
+ F ++M GV D+ +Y+ MD +CK+G+ +A K++ M K+G+K D+
Sbjct: 162 CSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDI 221
Query: 213 VAYNTVIR-----------------------------------AVGVSEGVDFAMRVYRE 237
Y T+++ A E V+ AM V+ +
Sbjct: 222 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSK 281
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRC 291
MR+ G P+ VT TVI +LC++GRV +A +M +G PD I Y+ C F
Sbjct: 282 MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDK 341
Query: 292 LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
EK E LF M++ GI + ++ + G + ++ M +G PD
Sbjct: 342 WEKAEE---LFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPD 395
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 136/292 (46%), Gaps = 19/292 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS+I L K D + ++ M + +P+ T+ + + ++ EA+ K
Sbjct: 118 TYNSIIAALCKAQTVDKAMEVLTTMVKS-GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKK 176
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G++ D V+Y +L+D LC+ EA+++ F G Y +L+G
Sbjct: 177 MRSDGVEPDVVTYNSLMDYLCKNGRCTEARKI-FDSMTKRGLK-----PDITTYGTLLQG 230
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + + M + G+ + + +SI + K K +A+ ++ +M+++G+ +
Sbjct: 231 YATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPN 290
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V Y TVI + S V+ AM + +M + G +P + N++I LC + +A +
Sbjct: 291 AVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFL 350
Query: 272 EMPKKG-CVP-----DVITYHCF-FRCLEKPREILGLFDRMIESGIRPKMDT 316
EM +G C+ +I HC R +E + LFD M+ G++P + T
Sbjct: 351 EMLDRGICLSTIFFNSIIDSHCKEGRVIESGK----LFDLMVRIGVKPDIIT 398
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 173/390 (44%), Gaps = 19/390 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGK----FFEFDLSWNLIHRMKDNP 61
C + + + AL+ +E Y ++ID K +DL +I +
Sbjct: 169 CKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVK----- 223
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEA 120
PN TF + + + EA+G N++ + V N L+D LC+ V +A
Sbjct: 224 KIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKA 283
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+ +V VE N Y ++ G+F + K + + + RGV ++HSY
Sbjct: 284 TSVL-----SVMIKQGVEPNVVT-YTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSY 337
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
S+ ++ +CK+ +AVKL+KEM K + + V Y+++I + S + + E+
Sbjct: 338 SVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINN 397
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---RE 297
G +++T N+++ LC+N +V +A A+L +M +G PD+ TY L K ++
Sbjct: 398 RGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKD 457
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
++ ++ G + Y +++ + GF + +ME+ GC PD Y L+
Sbjct: 458 AQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLIS 517
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPREE 387
AL A K EM A+ +E+
Sbjct: 518 ALFKNNKNGKAVKLLREMIARESDCSGKEQ 547
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 163/382 (42%), Gaps = 37/382 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N +I+ + + +++++ ++ P+ T + + V EA+ +
Sbjct: 90 TFNILINCFSHLCQLNFAFSMVAKILK-LGYQPDTVTVNTLLRGLCLNGKVKEALNFHDH 148
Query: 93 L--DEFGLKDEVSYCNLVDALCEYKHVIEAQEL----------------------CFGEN 128
+ F L D+VSY L++ LC+ A +L F ++
Sbjct: 149 VIRKRFHL-DQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKD 207
Query: 129 KNV--GFSGLVEMNKTKIY------NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
K V + EM KIY N ++ G+ + + EM V +++++
Sbjct: 208 KLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTF 267
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+I +D +CK G+ KA + M K+G++ +VV Y +++ + + V+ A V+ +
Sbjct: 268 NILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISL 327
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---RE 297
G P+V + + +I LC+N V EA + EM K P+ +TY L K +
Sbjct: 328 RGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISD 387
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ L D + G + TY LL + + + KM++ G PD Y LVD
Sbjct: 388 VWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVD 447
Query: 358 ALIDKGMLDMARKYDEEMFAKG 379
L G L A++ +++ KG
Sbjct: 448 GLCKNGRLKDAQRIYQDLLCKG 469
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 124/279 (44%), Gaps = 28/279 (10%)
Query: 106 NLVDALCEYKHVIEAQELC---FGENKNVGFSGLVEMNKTKI------------------ 144
NL DA+ + H++ F NK S LV+MN KI
Sbjct: 32 NLDDAVSSFNHILHMNNHTPPIFEFNK--ILSSLVKMNHFKIAISFSQQMELKGIQPEMF 89
Query: 145 -YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+N+++ + + ++ K G D + + + +C +GK +A+ + +
Sbjct: 90 TFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHV 149
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE-MGCQPSVVTCNTVIKLLCENGR 262
+K +D V+Y T+I + S A+++ R++ + +P V+ +I C++
Sbjct: 150 IRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKL 209
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVM 319
V +AY + +EM K P+V+T++ F + + +E +GL + M + + P + T+ +
Sbjct: 210 VIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNI 269
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
L+ + G ++ V M + G P+ Y +L+D
Sbjct: 270 LIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDG 308
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 100/239 (41%), Gaps = 41/239 (17%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A+ ++M+ KGI+ ++ +N +I ++FA + ++ ++G QP VT NT+++
Sbjct: 72 AISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLR 131
Query: 256 LLCENGRVREA------------------YAVLAE-MPKKG-----------------CV 279
LC NG+V+EA Y L + K G
Sbjct: 132 GLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVR 191
Query: 280 PDVITYHCFFRCLEKPREILGLFD---RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVV 336
PDVI Y K + ++ +D MI I P + T+ L+ F G L+ +
Sbjct: 192 PDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGL 251
Query: 337 WKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+M +P+ + +N L+D L +G + A M +G+ +P T L+ G
Sbjct: 252 LNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGV--EPNVVTYTSLMDG 308
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 5/172 (2%)
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ +N ++ ++ A+ ++M G QP + T N +I ++ A++++A
Sbjct: 53 IFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVA 112
Query: 272 EMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
++ K G PD +T + R CL K +E L D +I +Y L+ + G
Sbjct: 113 KILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSG 172
Query: 329 FLRPVFVVWKKMEE-LGCSPDEFAYNALVDALI-DKGMLDMARKYDEEMFAK 378
R + +K+E L PD Y A++D+ DK ++D Y E + K
Sbjct: 173 ETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKK 224
>gi|297724885|ref|NP_001174806.1| Os06g0499301 [Oryza sativa Japonica Group]
gi|52076487|dbj|BAD45366.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|125597333|gb|EAZ37113.1| hypothetical protein OsJ_21452 [Oryza sativa Japonica Group]
gi|255677074|dbj|BAH93534.1| Os06g0499301 [Oryza sativa Japonica Group]
Length = 642
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 158/337 (46%), Gaps = 11/337 (3%)
Query: 47 FDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN 106
D++ ++H + P+ T+ + A V++A+ +++ G+ ++
Sbjct: 189 LDVALRILHEIIPGWDLAPDKFTYSTVVSALADAGRVDDAVALVHEMVADGVVAAEAFNP 248
Query: 107 LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE 166
++ A+ V A +L FG + G V T YN+++ G G
Sbjct: 249 VLRAMLRAGDVKGAAKL-FGFMQ---LKGCVPTTAT--YNVLVHGLLVCGRAGAAMGVMR 302
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
M++ GVV + +Y +D + + G+ A K+ +EM++ G+ + Y+TVI S
Sbjct: 303 RMEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLAWNEFVYSTVITGFCKSG 362
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY- 285
+D A++V+ M +P+VV + +I L G++ EA + EM C P++ITY
Sbjct: 363 EIDCALKVWEAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIHSKCAPNIITYG 422
Query: 286 ---HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE 342
+F+ + R L +++ MI +G P +Y +L+ G L+ +VWK M +
Sbjct: 423 SIIQGYFKIGDTSRA-LSVWEEMIGAGCVPNAVSYSILINGLCNVGRLKDAMMVWKHMLD 481
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
GC+PD AY +++ L GM+D + +M A G
Sbjct: 482 RGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASG 518
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 121/303 (39%), Gaps = 48/303 (15%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQE 122
+P AT+ ++ + AMG +++ G+ V +Y +VD L V +A +
Sbjct: 275 VPTTATYNVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVDGLVRCGRVKDAWK 334
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ +N GL +Y+ ++ G+ K + WE M V ++ YS
Sbjct: 335 VAEEMERN----GLAW--NEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPNVVLYSA 388
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ + GK +A L++EM +++ Y ++I+ A+ V+ EM G
Sbjct: 389 MIGGLANFGKMTEAELLFREMIHSKCAPNIITYGSIIQGYFKIGDTSRALSVWEEMIGAG 448
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---------- 292
C P+ V+ + +I LC GR+++A V M +GC PD I Y + L
Sbjct: 449 CVPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGL 508
Query: 293 ------------------------------EKPREILGLFDRMIESGIRPKMDTYVMLLR 322
+ PR + L +RM++ G P T + LR
Sbjct: 509 RLFYDMLASGHADPDVISYNVLLDGLLLAKDLPRA-MDLLNRMLDQGCDPDTVTCNIFLR 567
Query: 323 KFG 325
+FG
Sbjct: 568 EFG 570
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 108/260 (41%), Gaps = 44/260 (16%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +V+D L + +W + M+ N + N + + + + ++ A+ +
Sbjct: 315 TYGAVVDGLVRCGRVKDAWKVAEEMERNGLAW-NEFVYSTVITGFCKSGEIDCALKVWEA 373
Query: 93 LDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ ++ V Y ++ L + + EA EL F E + + Y I++G
Sbjct: 374 MVASPVRPNVVLYSAMIGGLANFGKMTEA-ELLFREMIHSKCA-----PNIITYGSIIQG 427
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+FK+ + WEEM G V + SYSI ++ +C G+ A+ ++K M +G D
Sbjct: 428 YFKIGDTSRALSVWEEMIGAGCVPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRGCAPD 487
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREM---------------------------REM--- 241
+AY ++I+ + VS VD +R++ +M R M
Sbjct: 488 TIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHADPDVISYNVLLDGLLLAKDLPRAMDLL 547
Query: 242 ------GCQPSVVTCNTVIK 255
GC P VTCN ++
Sbjct: 548 NRMLDQGCDPDTVTCNIFLR 567
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 5/158 (3%)
Query: 228 VDFAMRVYREMREM-GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
+D A+R+ E+ P T +TV+ L + GRV +A A++ EM G V ++
Sbjct: 189 LDVALRILHEIIPGWDLAPDKFTYSTVVSALADAGRVDDAVALVHEMVADGVV-AAEAFN 247
Query: 287 CFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
R + + ++ G LF M G P TY +L+ G V ++ME
Sbjct: 248 PVLRAMLRAGDVKGAAKLFGFMQLKGCVPTTATYNVLVHGLLVCGRAGAAMGVMRRMERE 307
Query: 344 GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G P Y A+VD L+ G + A K EEM GL+
Sbjct: 308 GVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLA 345
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 154/319 (48%), Gaps = 10/319 (3%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+PN TF I+ Y + +A+ N + ++ D V+Y ++D LC+ + +A++
Sbjct: 205 VPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARD 264
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L ++ GL+ T YN+++ G+ KM W + E M + ++ D+ +Y++
Sbjct: 265 LLM----DMKSRGLLPNRNT--YNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNM 318
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ +C G+ +A KL EM+ + DVV+YNT+I + A ++ EM E G
Sbjct: 319 LINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKG 378
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLF 302
+P+ VT N ++K C+ G++ +A + +M + G PD +TY+ K + F
Sbjct: 379 VKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAF 438
Query: 303 DRMIESGIRP-KMDTYVM--LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
M E G + KMD+ + +LR R L + + + G DE +Y L+
Sbjct: 439 RTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGY 498
Query: 360 IDKGMLDMARKYDEEMFAK 378
G +D A K +EM K
Sbjct: 499 FKDGNVDRALKLWDEMKEK 517
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 157/357 (43%), Gaps = 23/357 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+YN++I+ ++ + ++ L+ M + PN T IM K Y +++A T K
Sbjct: 350 SYNTLINGCLEWSKISEAFKLLEEMSEKGVK-PNAVTHNIMVKWYCKEGKMDDASNTITK 408
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI------Y 145
++E G D V+Y L++ C+ ++ EA F + EM + +
Sbjct: 409 MEESGFSPDCVTYNTLINGYCKAGNMGEA------------FRTMDEMGRKNMKMDSVTL 456
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N ILR + + + KRG D SY + K G +A+KL+ EMK+
Sbjct: 457 NTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKE 516
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
K I V YN +I + + A+ E+ E G P T NT++ C G V +
Sbjct: 517 KEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEK 576
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFR--CLEKPRE-ILGLFDRMIESGIRPKMDTYVMLLR 322
A+ +M + PDV T + R C+E E L LF+ + G TY L+
Sbjct: 577 AFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLIT 636
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ G L F + +MEE PD + YNA++ AL D G + A ++ +M KG
Sbjct: 637 SLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKG 693
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 146/347 (42%), Gaps = 54/347 (15%)
Query: 10 DWKRALEFFNWVE--TDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
+W + E F +E ++ T+N ++ K + D + N I +M+++ S P+
Sbjct: 360 EWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFS-PDC 418
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK----DEVSYCNLVDALCEYKHVIEAQEL 123
T+ + Y A + EA F +DE G K D V+ ++ LC K + EA +L
Sbjct: 419 VTYNTLINGYCKAGNMGEA---FRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKL 475
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
K F V Y ++ G+FK + + W+EM ++ ++ +Y+
Sbjct: 476 LSSARKRGYFIDEVS------YGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCI 529
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ +C+ GK +A+ E+ + G+ D YNT++ V+ A + + +M E
Sbjct: 530 IGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSF 589
Query: 244 QPSVVTCN-----------------------------------TVIKLLCENGRVREAYA 268
+P V TCN T+I LC+ GR+ +A+
Sbjct: 590 KPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFN 649
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLE---KPREILGLFDRMIESGIRP 312
+L+EM +K PD TY+ L + RE +M+E G P
Sbjct: 650 LLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLP 696
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 101/193 (52%), Gaps = 6/193 (3%)
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV---GVSEGVDFAMRVYREMREMGCQP 245
+SG+P A +++K+MK+ ++ +++ NT++ ++ S V F+ + + ++G P
Sbjct: 147 QSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVP 206
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRM 305
+V T N VI C + ++A L M K C PD +TY+ L K + D +
Sbjct: 207 NVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLL 266
Query: 306 IE---SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
++ G+ P +TY +L+ + + G+L+ V + M + PD + YN L++ L ++
Sbjct: 267 MDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNE 326
Query: 363 GMLDMARKYDEEM 375
G ++ A K +EM
Sbjct: 327 GRIEEAFKLRDEM 339
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 135/355 (38%), Gaps = 77/355 (21%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQEL 123
P+ A YV + + A F K+ L+ + CN L+++L Y
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYP-------- 184
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ +V FS RE + + K G+V ++++++I
Sbjct: 185 ---SSHSVSFS---------------------------REAFNDAIKLGIVPNVNTFNIV 214
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV----GVSEGVDFAM------- 232
+ C K AV+ M K D V YNT++ + + + D M
Sbjct: 215 IYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGL 274
Query: 233 ------------------------RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
V M + P V T N +I LC GR+ EA+
Sbjct: 275 LPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFK 334
Query: 269 VLAEMPKKGCVPDVITYHCFFR-CLE--KPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ EM +PDV++Y+ CLE K E L + M E G++P T+ ++++ +
Sbjct: 335 LRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYC 394
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ G + KMEE G SPD YN L++ G + A + +EM K +
Sbjct: 395 KEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNM 449
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 77/150 (51%), Gaps = 2/150 (1%)
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
SGL+ T YN IL G+ + K +F +M + D+ + +I + +C G
Sbjct: 552 SGLLPDETT--YNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVL 609
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
KA+KL+ KG +D V YNT+I ++ +D A + EM E P T N +
Sbjct: 610 EKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAI 669
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVI 283
I L ++GR+REA +++M +KG +PD +
Sbjct: 670 ITALTDSGRIREAEEFMSKMLEKGNLPDQV 699
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 101/260 (38%), Gaps = 34/260 (13%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQE 122
IP+ T+ + +A+ N+L E GL DE +Y ++ C V +A +
Sbjct: 520 IPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQ 579
Query: 123 LCFGENKNVGFSGLVEMNKTKIY--NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
NK V S K ++ N++LRG K + + +G D +Y
Sbjct: 580 F---HNKMVENSF-----KPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTY 631
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ + +CK G+ A L EM++K + D YN +I A+ S + A +M E
Sbjct: 632 NTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLE 691
Query: 241 MGCQPSVV----TCNTV-------------------IKLLCENGRVREAYAVLAEMPKKG 277
G P V TV IK LC G+ ++A + E +KG
Sbjct: 692 KGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKG 751
Query: 278 CVPDVITYHCFFRCLEKPRE 297
D TY L K R+
Sbjct: 752 ITVDKSTYINLMDGLIKRRK 771
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 165/353 (46%), Gaps = 12/353 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN +I L + + + +++ M + P+ T+ I+ + +AM +
Sbjct: 9 TYNPLIHTLCERGQVRDALSVLDDMLCRGCA-PDVVTYNILLEATCKGRGYRQAMELIDL 67
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G + V+Y L+D +C V +A EL +N+ G T YN +L+G
Sbjct: 68 MRAEGCTPNNVTYNVLMDGMCGEGDVDDALELL----RNLPSHGCKP--STVNYNTVLKG 121
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
WG E EM + + ++++ + +C+ G +A++L ++M K G +
Sbjct: 122 LCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTAN 181
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+V YN +I + VD AM + +M+ GC+P +VT NT++K LC R +A ++
Sbjct: 182 IVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMD 241
Query: 272 EMPKKGCVPDVITYHCF--FRCLEKPR-EILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M + GC+PD +T++ F C + + + +F +M + G P TY ++ +
Sbjct: 242 NMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKAT 301
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
L ++ +M G +PD+ Y L + L D ++ A + ++ G+S
Sbjct: 302 KLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGIS 353
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 110/245 (44%), Gaps = 21/245 (8%)
Query: 173 VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM 232
V + ++Y+ + +C+ G+ A+ + +M +G DVV YN ++ A G AM
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 233 RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
+ MR GC P+ VT N ++ +C G V +A +L +P GC P + Y+ + L
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122
Query: 293 ---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE 349
E+ + L M+ P T+ +++ R G L+ + +KM + GC+ +
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182
Query: 350 FAYNALVDALIDK-------GMLDMARKY-------DEEMFAKGLSAKPR----EELGTK 391
YNA+++ L ++ G+L + Y KGL + R EEL
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242
Query: 392 LVQGG 396
+ Q G
Sbjct: 243 MTQNG 247
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 135/317 (42%), Gaps = 47/317 (14%)
Query: 6 CYANDWKRALEFF-NWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM-KDNPSS 63
C D ALE N C +T YN+V+ L + + L+ M ++N
Sbjct: 88 CGEGDVDDALELLRNLPSHGCK--PSTVNYNTVLKGLCSAERWGDADELVTEMLREN--C 143
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQE 122
PN ATF ++ L+ +A+ K+ + G + V+Y +++ LCE ++V A
Sbjct: 144 PPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMG 203
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L + K+ G + YN +L+G + W E + M + G + D +++
Sbjct: 204 L-LSKMKSYGCKPDI-----VTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNT 257
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM---- 238
+ +C+ G A++++K+M KG + + Y+T+I + + +D A+ ++ EM
Sbjct: 258 LIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKG 317
Query: 239 ------------------------------REMGCQPSVVTCNTVIKLLCENGRVREAYA 268
++ G P V N ++ LC NG+ A
Sbjct: 318 FNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAID 377
Query: 269 VLAEMPKKGCVPDVITY 285
++A M GC+PD +TY
Sbjct: 378 IMAYMVSSGCMPDDLTY 394
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---RE 297
M QP+ T N +I LCE G+VR+A +VL +M +GC PDV+TY+ K R+
Sbjct: 1 MPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQ 60
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ L D M G P TY +L+ G + + + + GC P YN ++
Sbjct: 61 AMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLK 120
Query: 358 AL 359
L
Sbjct: 121 GL 122
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 115/252 (45%), Gaps = 13/252 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++I+ L + D + L+ +MK P+ T+ + K +A +A +
Sbjct: 184 TYNAIINGLCEQRNVDGAMGLLSKMKSYGCK-PDIVTYNTLLKGLCSAARWVDAEELMDN 242
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + G L D V++ L+ LC+ +++A E+ F + + G + + Y+ I+ G
Sbjct: 243 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEV-FKQMPDKGCTP-----NSITYSTIISG 296
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + + E + EM +G D Y + + + +A++ ++++ GI
Sbjct: 297 LAKATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPH 355
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V YN ++ + + +FA+ + M GC P +T +I+ L G + EA +L
Sbjct: 356 TVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLI 415
Query: 272 EMPKKGCVPDVI 283
++ C DV+
Sbjct: 416 KL----CSRDVL 423
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 163/375 (43%), Gaps = 54/375 (14%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQEL 123
P T+ I+ AH A+ F +L GL+ ++ N L+ CE K EA ++
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 168
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVV--KDLHSYS 181
+G + Y+++L+ G+ + M + G V D+ +Y+
Sbjct: 169 LLHRTPELGC-----VPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYN 223
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF----------- 230
+D K G KA L+KEM ++GI D V Y++V+ A+ + +D
Sbjct: 224 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNK 283
Query: 231 ------------------------AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
A+RV++EMR P VVT N ++ LC+ G+++EA
Sbjct: 284 GVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEA 343
Query: 267 YAVLAEMPKKGCVPDVITYHCFFR------CLEKPREILGLFDRMIESGIRPKMDTYVML 320
V M KG PDV +Y+ CL ++ LFD M+ GI P + T+ +L
Sbjct: 344 RDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLV---DMTDLFDLMLGDGIAPVICTFNVL 400
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
++ + G L +++ +M + G P+ Y ++ AL G +D A + +M +G+
Sbjct: 401 IKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGV 460
Query: 381 SAKPREELGTKLVQG 395
+ P + L+QG
Sbjct: 461 A--PDKYAYHCLIQG 473
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 159/387 (41%), Gaps = 82/387 (21%)
Query: 83 VNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
VN+A F ++ + G+ D V+Y ++V ALC+ + + +A+ + + G++ N
Sbjct: 235 VNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFL----RQMVNKGVLPNNW 290
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
T YN ++ G+ W + ++EM ++ ++ D+ ++++ M +CK GK +A ++
Sbjct: 291 T--YNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFD 348
Query: 202 EMKKKGIKMDVVAYN-----------------------------------TVIRAVGVSE 226
M KG DV +YN +I+A
Sbjct: 349 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCG 408
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
+D AM ++ EMR+ G +P+V+T TVI LC G++ +A +M +G PD YH
Sbjct: 409 MLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 468
Query: 287 CFFR------CLEKPREILG--------------------------------LFDRMIES 308
C + L K +E++ +FD +
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNV 528
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G+ P Y ML+ + G + V+ M G P++ Y LV+ G +D
Sbjct: 529 GLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEG 588
Query: 369 RKYDEEMFAKGLSAKPREELGTKLVQG 395
EM KG+ KP L ++ G
Sbjct: 589 LSLFREMLQKGI--KPSTILYNIIIDG 613
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 169/385 (43%), Gaps = 40/385 (10%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+SV+ L K D + + +M N +PN+ T+ + Y + EA+ F +
Sbjct: 256 TYSSVVHALCKARAMDKAEAFLRQMV-NKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKE 314
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL-----CFGENKNV--------GFSG--- 135
+ L D V++ L+ +LC+Y + EA+++ G+N +V G++
Sbjct: 315 MRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGC 374
Query: 136 LVEMNK-------------TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
LV+M +N++++ + K + EM GV ++ +Y+
Sbjct: 375 LVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTT 434
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ +C+ GK A++ + +M +G+ D AY+ +I+ + A + E+ G
Sbjct: 435 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG 494
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPR 296
+V +++I LC+ GRV +A + G P + Y +C +EK
Sbjct: 495 MHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKA- 553
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
L +FD M+ +GI P Y L+ + + G + ++++M + G P YN ++
Sbjct: 554 --LRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIII 611
Query: 357 DALIDKGMLDMARKYDEEMFAKGLS 381
D L + G A+ EM G++
Sbjct: 612 DGLFEAGRTVPAKVKFHEMTESGIA 636
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 142/320 (44%), Gaps = 10/320 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
P TF ++ K Y ++++AM FN++ + G+K V +Y ++ ALC + +A E
Sbjct: 392 PVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEK 451
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + + G + Y+ +++G+ K +E E+ G+ D+ +S
Sbjct: 452 -FNQMIDQGVA-----PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSI 505
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
++ +CK G+ A ++ G+ V Y+ ++ + ++ A+RV+ M G
Sbjct: 506 INNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 565
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL-EKPREILG-- 300
+P+ V T++ C+ GR+ E ++ EM +KG P I Y+ L E R +
Sbjct: 566 EPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 625
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
F M ESGI TY ++LR + ++K++ + D N ++ +
Sbjct: 626 KFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMF 685
Query: 361 DKGMLDMARKYDEEMFAKGL 380
++ A+ + GL
Sbjct: 686 QTRRVEEAKDLFASISRSGL 705
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 158/353 (44%), Gaps = 15/353 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +VI L + + D + ++M D + P+ + + + + T + +A ++
Sbjct: 431 TYTTVIAALCRIGKMDDAMEKFNQMIDQGVA-PDKYAYHCLIQGFCTHGSLLKAKELISE 489
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G+ D V + ++++ LC+ V++AQ + F NVG +Y+M++ G
Sbjct: 490 IMNNGMHLDIVLFSSIINNLCKLGRVMDAQNI-FDLTVNVGLH-----PTAVVYSMLMDG 543
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + K ++ M G+ + Y ++ CK G+ + + L++EM +KGIK
Sbjct: 544 YCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS 603
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ YN +I + + A + EM E G + T + V++ L +N EA +
Sbjct: 604 TILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFK 663
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
E+ D+IT + + + R E LF + SG+ P + TY +++ + G
Sbjct: 664 ELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEG 723
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY----DEEMFA 377
+ ++ M+ GC PD N +V L+ K + A Y DE F+
Sbjct: 724 LVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFS 776
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 168/343 (48%), Gaps = 17/343 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N VI+ F+ L+ +++ +M P+ T + + + V++A+ +K
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYE-PDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G + D V+Y ++D+LC+ + V +A + K +G G+ T Y ++ G
Sbjct: 181 MVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFF----KEIGRKGIRPNVVT--YTALVNG 234
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
W +M KR + ++ +YS +D K+GK +A ++++EM + I D
Sbjct: 235 LCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPD 294
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+V Y+++I + + + +D A +++ M GC P VV+ NT+I C+ RV + +
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFR 354
Query: 272 EMPKKGCVPDVITYHC----FFRC--LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+M ++G V + +TY+ FF+ ++K +E F +M G+ P + TY +LL
Sbjct: 355 KMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQE---FFSQMDSFGVSPDIWTYNILLGGLC 411
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G L V+++ M++ D Y ++ + G ++ A
Sbjct: 412 DNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDA 454
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 129/255 (50%), Gaps = 14/255 (5%)
Query: 27 FTHTTDTYNSVIDIL---GKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLV 83
T TY++++D GK E + + RM +P + T+ + +
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIV----TYSSLINGLCLHDRI 311
Query: 84 NEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKT 142
+EA F+ + G D VSY L++ C+ K V + +L + + GLV N T
Sbjct: 312 DEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLF----RKMSQRGLV--NNT 365
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
YN +++G+F++ K +EF+ +MD GV D+ +Y+I + +C +G KA+ ++++
Sbjct: 366 VTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFED 425
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M+K + +D+V Y TVI+ + + V+ A ++ + G +P +VT T++ LC G
Sbjct: 426 MQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485
Query: 263 VREAYAVLAEMPKKG 277
E A+ +M ++G
Sbjct: 486 QHEVEALYTKMKQEG 500
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 112/238 (47%), Gaps = 3/238 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+N +L KM + ++M+ G+ DL++++I ++ C + A+ + +M
Sbjct: 88 FNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKML 147
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K G + D V +++ V A+ + +M E+G +P +V N +I LC+ RV
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVN 207
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLL 321
+A E+ +KG P+V+TY L + L MI+ I P + TY LL
Sbjct: 208 DALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALL 267
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
F + G + ++++M + PD Y++L++ L +D A + + M +KG
Sbjct: 268 DAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 107/236 (45%), Gaps = 5/236 (2%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+ EM K + ++ + + K K + L K+M+ GI+ D+ +N VI
Sbjct: 71 NLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCF 130
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
V A+ V +M ++G +P VT +++ C RV +A +++ +M + G PD+
Sbjct: 131 CCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDI 190
Query: 283 ITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
+ Y+ L K R + L F + GIRP + TY L+ G + +
Sbjct: 191 VAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRD 250
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
M + +P+ Y+AL+DA + G + A++ EEM +S P + L+ G
Sbjct: 251 MIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVR--MSIDPDIVTYSSLING 304
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 7/169 (4%)
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY----H 286
A+ ++REM + PS+V N ++ + + + ++ +M G D+ T+ +
Sbjct: 69 AINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 287 CFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
CF C + L + +M++ G P T L+ F R + + KM E+G
Sbjct: 129 CFCCCFQVSLA-LSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYR 187
Query: 347 PDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
PD AYNA++D+L ++ A + +E+ KG+ +P T LV G
Sbjct: 188 PDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGI--RPNVVTYTALVNG 234
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 168/393 (42%), Gaps = 46/393 (11%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N+++ L + NL H+M + PN TF + + EA+ ++
Sbjct: 151 TFNTLLHGLCVEDRVSEALNLFHQMFETTCR-PNVVTFTTLMNGLCREGRIVEAVALLDR 209
Query: 93 LDEFGLK-DEVSYCNLVDALC----------------EYKHVIE--------AQELCFGE 127
+ E GL+ +++Y +VD +C E H+I LC
Sbjct: 210 MMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDG 269
Query: 128 NKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
+ + EM + I YN ++ G+ W + +EM +R + D+ +Y+
Sbjct: 270 RHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
++ K GK ++A +LY EM +GI + + Y+++I +D A ++ M
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREI 298
GC P+++T NT+I C R+ + +L EM + G V D TY+ F +
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL-----------GCSP 347
L L MI SG+ P + T LL G L+ ++K M++ G P
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
D YN L+ LI++G A + EEM +G+
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 168/387 (43%), Gaps = 35/387 (9%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TY +++D + K + + NL+ +M++ IPN + + ++A
Sbjct: 218 TQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Query: 90 FNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI---- 144
F ++ E G+ D +Y +++ C +A++L L EM + KI
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL------------LQEMLERKISPDV 325
Query: 145 --YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
YN ++ + K + + E ++EM RG++ + +YS +D CK + A ++
Sbjct: 326 VTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYL 385
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M KG +++ +NT+I ++ +D M + EM E G T NT+I G
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIES----------- 308
+ A +L EM G PD++T L K ++ L +F M +S
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G+ P + TY +L+ G ++++M G PD Y++++D L + LD A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 369 RKYDEEMFAKGLSAKPREELGTKLVQG 395
+ + M +K S P T L+ G
Sbjct: 566 TQMFDSMGSKSFS--PNVVTFTTLING 590
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 141/322 (43%), Gaps = 17/322 (5%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGE 127
+F I+ K + + + A+ TF K+ + GL D V++ L+ LC V EA L
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNL---- 171
Query: 128 NKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F + E + ++ G + + + M + G+ +Y +
Sbjct: 172 -----FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226
Query: 185 DIMCKSGKPWKAVKLYKEMKK-KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
D MCK G A+ L ++M++ I +VV Y+ +I ++ A ++ EM+E G
Sbjct: 227 DGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILG 300
P + T N++I C +GR +A +L EM ++ PDV+TY+ K E
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEE 346
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L+D M+ GI P TY ++ F + L ++ M GCSP+ +N L+D
Sbjct: 347 LYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406
Query: 361 DKGMLDMARKYDEEMFAKGLSA 382
+D + EM GL A
Sbjct: 407 GAKRIDDGMELLHEMTETGLVA 428
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 45/260 (17%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+++M+++ + D++S++I + C K A+ + ++ K G+ DVV +NT++ +
Sbjct: 100 SLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGL 159
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
V + V A+ ++ +M E C+P+VVT T++ LC GR+ EA A+L M + G P
Sbjct: 160 CVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219
Query: 283 ITYHC----------------FFRCLEKPREIL-----------------------GLFD 303
ITY R +E+ I+ LF
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT 279
Query: 304 RMIESGIRPKMDTYVMLLRKF---GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
M E GI P + TY ++ F GRW + ++M E SPD YNAL++A +
Sbjct: 280 EMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL---QEMLERKISPDVVTYNALINAFV 336
Query: 361 DKGMLDMARKYDEEMFAKGL 380
+G A + +EM +G+
Sbjct: 337 KEGKFFEAEELYDEMLPRGI 356
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 154/347 (44%), Gaps = 32/347 (9%)
Query: 33 TYNSVIDIL---GKFFEFDLSWN-LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
TYN++I+ GKFFE + ++ ++ R IPN T+ M + + ++ A
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPR-----GIIPNTITYSSMIDGFCKQNRLDAAEH 381
Query: 89 TFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
F + G +++ L+D C K + + EL + +GLV T YN
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTE----TGLVA--DTTTYNT 435
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK- 206
++ G++ + + +EM G+ D+ + +D +C +GK A++++K M+K
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495
Query: 207 ----------GIKMDVVAYNTVIRAVGVSEGVDF-AMRVYREMREMGCQPSVVTCNTVIK 255
G++ DV YN +I + ++EG A +Y EM G P +T +++I
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGL-INEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRP 312
LC+ R+ EA + M K P+V+T+ K + L LF M GI
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 614
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
TY+ L+ F + G + ++++M G PD ++ L
Sbjct: 615 NAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
GE+ GF G K+ + G+ ++ + + +M + + + + M
Sbjct: 36 GESCEAGFGG----ESLKLQS----GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMG 87
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
++ + +P + LY++M++K I+ D+ ++ +I+ + FA+ + ++ ++G P
Sbjct: 88 VVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHP 147
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLF 302
VVT NT++ LC RV EA + +M + C P+V+T+ C E + E + L
Sbjct: 148 DVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALL 207
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG-CSPDEFAYNALVDALID 361
DRM+E G++P TY ++ + G + +KMEE+ P+ Y+A++D+L
Sbjct: 208 DRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCK 267
Query: 362 KGMLDMARKYDEEMFAKGL 380
G A+ EM KG+
Sbjct: 268 DGRHSDAQNLFTEMQEKGI 286
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 140/307 (45%), Gaps = 14/307 (4%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T TY+S+ID K D + ++ + M S PN TF + Y A +++ M
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS-PNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 91 NKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+++ E GL D +Y L+ + A +L E + G + T + +
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDL-LQEMISSGLCPDIVTCDTLLDGLCD 477
Query: 150 RGWFK--MSWWGKCREFWEEMDK----RGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
G K + + ++ +++D GV D+ +Y+I + + GK +A +LY+EM
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
+GI D + Y+++I + +D A +++ M P+VVT T+I C+ GRV
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 264 REAYAVLAEMPKKGCVPDVITY---HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVML 320
+ + EM ++G V + ITY C FR + L +F MI SG+ P DT +
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYP--DTITIR 655
Query: 321 LRKFGRW 327
G W
Sbjct: 656 NMLTGLW 662
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 123/287 (42%), Gaps = 52/287 (18%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N++ID D L+H M + + + T+ + + +N A+ +
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTET-GLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNV-------GFSGLVEMNKTKI 144
+ GL ++ C+ L+D LC+ + +A E+ K+ F+G VE + +
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNG-VEPD-VQT 513
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK--------------- 189
YN+++ G + + E +EEM RG+V D +YS +D +CK
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 190 --------------------SGKPWKAVKLYKEMKKKGIKMDVVAYNTVI---RAVGVSE 226
+G+ ++L+ EM ++GI + + Y T+I R VG
Sbjct: 574 SKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG--- 630
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
++ A+ +++EM G P +T ++ L ++ A A+L ++
Sbjct: 631 NINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 77/179 (43%), Gaps = 17/179 (9%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ I+ + EA + ++ G+ D ++Y +++D LC+ + EA ++
Sbjct: 509 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 568
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + FS V + ++ G+ K E + EM +RG+V + +Y
Sbjct: 569 -FDSMGSKSFSPNV-----VTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI----------RAVGVSEGVDFAM 232
+ K G A+ +++EM G+ D + ++ RAV + E + +M
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMSM 681
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 168/393 (42%), Gaps = 46/393 (11%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N+++ L + NL H+M + PN TF + + EA+ ++
Sbjct: 151 TFNTLLHGLCVEDRVSEALNLFHQMFETTCR-PNVVTFTTLMNGLCREGRIVEAVALLDR 209
Query: 93 LDEFGLK-DEVSYCNLVDALC----------------EYKHVIE--------AQELCFGE 127
+ E GL+ +++Y +VD +C E H+I LC
Sbjct: 210 MMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDG 269
Query: 128 NKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
+ + EM + I YN ++ G+ W + +EM +R + D+ +Y+
Sbjct: 270 RHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
++ K GK ++A +LY EM +GI + + Y+++I +D A ++ M
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREI 298
GC P+++T NT+I C R+ + +L EM + G V D TY+ F +
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL-----------GCSP 347
L L MI SG+ P + T LL G L+ ++K M++ G P
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
D YN L+ LI++G A + EEM +G+
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 168/387 (43%), Gaps = 35/387 (9%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TY +++D + K + + NL+ +M++ IPN + + ++A
Sbjct: 218 TQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Query: 90 FNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI---- 144
F ++ E G+ D +Y +++ C +A++L L EM + KI
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL------------LQEMLERKISPDV 325
Query: 145 --YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
YN ++ + K + + E ++EM RG++ + +YS +D CK + A ++
Sbjct: 326 VTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYL 385
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M KG +++ +NT+I ++ +D M + EM E G T NT+I G
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIES----------- 308
+ A +L EM G PD++T L K ++ L +F M +S
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G+ P + TY +L+ G ++++M G PD Y++++D L + LD A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 369 RKYDEEMFAKGLSAKPREELGTKLVQG 395
+ + M +K S P T L+ G
Sbjct: 566 TQMFDSMGSKSFS--PNVVTFTTLING 590
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 141/322 (43%), Gaps = 17/322 (5%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGE 127
+F I+ K + + + A+ TF KL + GL D V++ L+ LC V EA L
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNL---- 171
Query: 128 NKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F + E + ++ G + + + M + G+ +Y +
Sbjct: 172 -----FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226
Query: 185 DIMCKSGKPWKAVKLYKEMKK-KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
D MCK G A+ L ++M++ I +VV Y+ +I ++ A ++ EM+E G
Sbjct: 227 DGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILG 300
P + T N++I C +GR +A +L EM ++ PDV+TY+ K E
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEE 346
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L+D M+ GI P TY ++ F + L ++ M GCSP+ +N L+D
Sbjct: 347 LYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406
Query: 361 DKGMLDMARKYDEEMFAKGLSA 382
+D + EM GL A
Sbjct: 407 GAKRIDDGMELLHEMTETGLVA 428
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 45/260 (17%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+++M+++ + D++S++I + C K A+ + ++ K G+ DVV +NT++ +
Sbjct: 100 SLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGL 159
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
V + V A+ ++ +M E C+P+VVT T++ LC GR+ EA A+L M + G P
Sbjct: 160 CVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219
Query: 283 ITYHC----------------FFRCLEKPREIL-----------------------GLFD 303
ITY R +E+ I+ LF
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT 279
Query: 304 RMIESGIRPKMDTYVMLLRKF---GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
M E GI P + TY ++ F GRW + ++M E SPD YNAL++A +
Sbjct: 280 EMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL---QEMLERKISPDVVTYNALINAFV 336
Query: 361 DKGMLDMARKYDEEMFAKGL 380
+G A + +EM +G+
Sbjct: 337 KEGKFFEAEELYDEMLPRGI 356
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 154/347 (44%), Gaps = 32/347 (9%)
Query: 33 TYNSVIDIL---GKFFEFDLSWN-LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
TYN++I+ GKFFE + ++ ++ R IPN T+ M + + ++ A
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPR-----GIIPNTITYSSMIDGFCKQNRLDAAEH 381
Query: 89 TFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
F + G +++ L+D C K + + EL + +GLV T YN
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTE----TGLVA--DTTTYNT 435
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK- 206
++ G++ + + +EM G+ D+ + +D +C +GK A++++K M+K
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495
Query: 207 ----------GIKMDVVAYNTVIRAVGVSEGVDF-AMRVYREMREMGCQPSVVTCNTVIK 255
G++ DV YN +I + ++EG A +Y EM G P +T +++I
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGL-INEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRP 312
LC+ R+ EA + M K P+V+T+ K + L LF M GI
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 614
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
TY+ L+ F + G + ++++M G PD ++ L
Sbjct: 615 NAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
GE+ GF G K+ + G+ ++ + + +M + + + + M
Sbjct: 36 GESCEAGFGG----ESLKLQS----GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMG 87
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
++ + +P + LY++M++K I+ D+ ++ +I+ + FA+ + ++ ++G P
Sbjct: 88 VVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHP 147
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLF 302
VVT NT++ LC RV EA + +M + C P+V+T+ C E + E + L
Sbjct: 148 DVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALL 207
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG-CSPDEFAYNALVDALID 361
DRM+E G++P TY ++ + G + +KMEE+ P+ Y+A++D+L
Sbjct: 208 DRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCK 267
Query: 362 KGMLDMARKYDEEMFAKGL 380
G A+ EM KG+
Sbjct: 268 DGRHSDAQNLFTEMQEKGI 286
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 140/307 (45%), Gaps = 14/307 (4%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T TY+S+ID K D + ++ + M S PN TF + Y A +++ M
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS-PNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 91 NKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+++ E GL D +Y L+ + A +L E + G + T + +
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDL-LQEMISSGLCPDIVTCDTLLDGLCD 477
Query: 150 RGWFK--MSWWGKCREFWEEMDK----RGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
G K + + ++ +++D GV D+ +Y+I + + GK +A +LY+EM
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
+GI D + Y+++I + +D A +++ M P+VVT T+I C+ GRV
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 264 REAYAVLAEMPKKGCVPDVITY---HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVML 320
+ + EM ++G V + ITY C FR + L +F MI SG+ P DT +
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYP--DTITIR 655
Query: 321 LRKFGRW 327
G W
Sbjct: 656 NMLTGLW 662
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 123/287 (42%), Gaps = 52/287 (18%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N++ID D L+H M + + + T+ + + +N A+ +
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTET-GLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNV-------GFSGLVEMNKTKI 144
+ GL ++ C+ L+D LC+ + +A E+ K+ F+G VE + +
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNG-VEPD-VQT 513
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK--------------- 189
YN+++ G + + E +EEM RG+V D +YS +D +CK
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 190 --------------------SGKPWKAVKLYKEMKKKGIKMDVVAYNTVI---RAVGVSE 226
+G+ ++L+ EM ++GI + + Y T+I R VG
Sbjct: 574 SKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG--- 630
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
++ A+ +++EM G P +T ++ L ++ A A+L ++
Sbjct: 631 NINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 77/179 (43%), Gaps = 17/179 (9%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ I+ + EA + ++ G+ D ++Y +++D LC+ + EA ++
Sbjct: 509 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 568
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + FS V + ++ G+ K E + EM +RG+V + +Y
Sbjct: 569 -FDSMGSKSFSPNV-----VTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI----------RAVGVSEGVDFAM 232
+ K G A+ +++EM G+ D + ++ RAV + E + +M
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMSM 681
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 168/393 (42%), Gaps = 46/393 (11%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N+++ L + NL H+M + PN TF + + EA+ ++
Sbjct: 151 TFNTLLHGLCVEDRVSEALNLFHQMFETTCR-PNVVTFTTLMNGLCREGRIVEAVALLDR 209
Query: 93 LDEFGLK-DEVSYCNLVDALC----------------EYKHVIE--------AQELCFGE 127
+ E GL+ +++Y +VD +C E H+I LC
Sbjct: 210 MMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDG 269
Query: 128 NKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
+ + EM + I YN ++ G+ W + +EM +R + D+ +Y+
Sbjct: 270 RHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
++ K GK ++A +LY EM +GI + + Y+++I +D A ++ M
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREI 298
GC P+++T NT+I C R+ + +L EM + G V D TY+ F +
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL-----------GCSP 347
L L MI SG+ P + T LL G L+ ++K M++ G P
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
D YN L+ LI++G A + EEM +G+
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 168/387 (43%), Gaps = 35/387 (9%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TY +++D + K + + +L+ +M++ IPN + + ++A
Sbjct: 218 TQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Query: 90 FNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI---- 144
F ++ E G+ D +Y +++ C +A++L L EM + KI
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL------------LQEMLERKISPDV 325
Query: 145 --YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
YN ++ + K + + E ++EM RG++ + +YS +D CK + A ++
Sbjct: 326 VTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYL 385
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M KG +++ +NT+I ++ +D M + EM E G T NT+I G
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIES----------- 308
+ A +L EM G PD++T L K ++ L +F M +S
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G+ P + TY +L+ G ++++M G PD Y++++D L + LD A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 369 RKYDEEMFAKGLSAKPREELGTKLVQG 395
+ + M +K S P T L+ G
Sbjct: 566 TQMFDSMGSKSFS--PNVVTFTTLING 590
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 141/322 (43%), Gaps = 17/322 (5%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGE 127
+F I+ K + + + A+ TF K+ + GL D V++ L+ LC V EA L
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNL---- 171
Query: 128 NKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F + E + ++ G + + + M + G+ +Y +
Sbjct: 172 -----FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226
Query: 185 DIMCKSGKPWKAVKLYKEMKK-KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
D MCK G A+ L ++M++ I +VV Y+ +I ++ A ++ EM+E G
Sbjct: 227 DGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILG 300
P + T N++I C +GR +A +L EM ++ PDV+TY+ K E
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEE 346
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L+D M+ GI P TY ++ F + L ++ M GCSP+ +N L+D
Sbjct: 347 LYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406
Query: 361 DKGMLDMARKYDEEMFAKGLSA 382
+D + EM GL A
Sbjct: 407 GAKRIDDGMELLHEMTETGLVA 428
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 45/260 (17%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+++M+++ + D++S++I + C K A+ + ++ K G+ DVV +NT++ +
Sbjct: 100 SLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGL 159
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
V + V A+ ++ +M E C+P+VVT T++ LC GR+ EA A+L M + G P
Sbjct: 160 CVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219
Query: 283 ITYHC----------------FFRCLEKPREIL-----------------------GLFD 303
ITY R +E+ I+ LF
Sbjct: 220 ITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT 279
Query: 304 RMIESGIRPKMDTYVMLLRKF---GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
M E GI P + TY ++ F GRW + ++M E SPD YNAL++A +
Sbjct: 280 EMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL---QEMLERKISPDVVTYNALINAFV 336
Query: 361 DKGMLDMARKYDEEMFAKGL 380
+G A + +EM +G+
Sbjct: 337 KEGKFFEAEELYDEMLPRGI 356
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 154/347 (44%), Gaps = 32/347 (9%)
Query: 33 TYNSVIDIL---GKFFEFDLSWN-LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
TYN++I+ GKFFE + ++ ++ R IPN T+ M + + ++ A
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPR-----GIIPNTITYSSMIDGFCKQNRLDAAEH 381
Query: 89 TFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
F + G +++ L+D C K + + EL + +GLV T YN
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTE----TGLVA--DTTTYNT 435
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK- 206
++ G++ + + +EM G+ D+ + +D +C +GK A++++K M+K
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495
Query: 207 ----------GIKMDVVAYNTVIRAVGVSEGVDF-AMRVYREMREMGCQPSVVTCNTVIK 255
G++ DV YN +I + ++EG A +Y EM G P +T +++I
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGL-INEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRP 312
LC+ R+ EA + M K P+V+T+ K + L LF M GI
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 614
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
TY+ L+ F + G + ++++M G PD ++ L
Sbjct: 615 NAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
GE+ GF G K+ + G+ ++ + + +M + + + + M
Sbjct: 36 GESCEAGFGG----ESLKLQS----GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMG 87
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
++ + +P + LY++M++K I+ D+ ++ +I+ + FA+ + ++ ++G P
Sbjct: 88 VVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHP 147
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLF 302
VVT NT++ LC RV EA + +M + C P+V+T+ C E + E + L
Sbjct: 148 DVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALL 207
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG-CSPDEFAYNALVDALID 361
DRM+E G++P TY ++ + G + +KMEE+ P+ Y+A++D+L
Sbjct: 208 DRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCK 267
Query: 362 KGMLDMARKYDEEMFAKGL 380
G A+ EM KG+
Sbjct: 268 DGRHSDAQNLFTEMQEKGI 286
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 140/307 (45%), Gaps = 14/307 (4%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T TY+S+ID K D + ++ + M S PN TF + Y A +++ M
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS-PNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 91 NKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+++ E GL D +Y L+ + A +L E + G + T + +
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDL-LQEMISSGLCPDIVTCDTLLDGLCD 477
Query: 150 RGWFK--MSWWGKCREFWEEMDK----RGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
G K + + ++ +++D GV D+ +Y+I + + GK +A +LY+EM
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
+GI D + Y+++I + +D A +++ M P+VVT T+I C+ GRV
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 264 REAYAVLAEMPKKGCVPDVITY---HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVML 320
+ + EM ++G V + ITY C FR + L +F MI SG+ P DT +
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYP--DTITIR 655
Query: 321 LRKFGRW 327
G W
Sbjct: 656 NMLTGLW 662
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 123/287 (42%), Gaps = 52/287 (18%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N++ID D L+H M + + + T+ + + +N A+ +
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTET-GLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNV-------GFSGLVEMNKTKI 144
+ GL ++ C+ L+D LC+ + +A E+ K+ F+G VE + +
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNG-VEPD-VQT 513
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK--------------- 189
YN+++ G + + E +EEM RG+V D +YS +D +CK
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 190 --------------------SGKPWKAVKLYKEMKKKGIKMDVVAYNTVI---RAVGVSE 226
+G+ ++L+ EM ++GI + + Y T+I R VG
Sbjct: 574 SKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG--- 630
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
++ A+ +++EM G P +T ++ L ++ A A+L ++
Sbjct: 631 NINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 77/179 (43%), Gaps = 17/179 (9%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ I+ + EA + ++ G+ D ++Y +++D LC+ + EA ++
Sbjct: 509 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 568
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + FS V + ++ G+ K E + EM +RG+V + +Y
Sbjct: 569 -FDSMGSKSFSPNV-----VTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI----------RAVGVSEGVDFAM 232
+ K G A+ +++EM G+ D + ++ RAV + E + +M
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMSM 681
>gi|326513116|dbj|BAK06798.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 154/313 (49%), Gaps = 20/313 (6%)
Query: 69 TFRIMFKRYVTAHLVNE-AMGTFNKLDEFG--LKDEVSYCNLVDALCEYKHVIEAQELCF 125
TF I+F+R+ + + A+ F L ++D + +L+DAL + +H +A L
Sbjct: 128 TFPILFERFAASQRRPDIAVRLFLSLHRSHRVVQDLPLFNSLLDALGKSRHASKAASLVR 187
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
+ + YN + GW + + + +M + GV +Y+I +
Sbjct: 188 ALERRFPPDVVT-------YNTLADGWCRAKDTSRALDLLRQMAESGVTPTKTTYNIILK 240
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIK-----MDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
++G+ A + +MKK+G K D+V+Y T+I +GV+ +D A +++ EM +
Sbjct: 241 GFFRAGQIQHAWNFFLQMKKRGAKDESCKPDIVSYTTIIHGLGVAGQLDKARKLFDEMSK 300
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPRE 297
GC PSV T N +I+++C+ G V +A V +M +K +P+V+TY R L K
Sbjct: 301 EGCTPSVATYNALIQVICKKGNVEDAVTVFDDMVRKDYMPNVVTYTVLIRGLCHVGKIDR 360
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE-LGCSPDEFAYNALV 356
+ L +RM G P + TY +L+R G + ++++M + C P++ YN ++
Sbjct: 361 AMKLMERMKGEGCEPVVQTYNVLIRYSFEEGEIEKALCLFERMSKGEDCLPNQDTYNIII 420
Query: 357 DAL-IDKGMLDMA 368
A+ + K DMA
Sbjct: 421 SAMFVRKRAEDMA 433
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 117/252 (46%), Gaps = 10/252 (3%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
++N +L K K +++R D+ +Y+ D C++ +A+ L ++M
Sbjct: 165 LFNSLLDALGKSRHASKAASLVRALERR-FPPDVVTYNTLADGWCRAKDTSRALDLLRQM 223
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG-----CQPSVVTCNTVIKLLC 258
+ G+ YN +++ + + A + +M++ G C+P +V+ T+I L
Sbjct: 224 AESGVTPTKTTYNIILKGFFRAGQIQHAWNFFLQMKKRGAKDESCKPDIVSYTTIIHGLG 283
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMD 315
G++ +A + EM K+GC P V TY+ + + K + + +FD M+ P +
Sbjct: 284 VAGQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNVEDAVTVFDDMVRKDYMPNVV 343
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
TY +L+R G + + ++M+ GC P YN L+ ++G ++ A E M
Sbjct: 344 TYTVLIRGLCHVGKIDRAMKLMERMKGEGCEPVVQTYNVLIRYSFEEGEIEKALCLFERM 403
Query: 376 FAKGLSAKPREE 387
+KG P ++
Sbjct: 404 -SKGEDCLPNQD 414
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 112/268 (41%), Gaps = 22/268 (8%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMK----DNP 61
C A D RAL+ + + T T TYN ++ + + +WN +MK +
Sbjct: 208 CRAKDTSRALDLLRQM-AESGVTPTKTTYNIILKGFFRAGQIQHAWNFFLQMKKRGAKDE 266
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEA 120
S P+ ++ + A +++A F+++ + G V +Y L+ +C+ +V
Sbjct: 267 SCKPDIVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNV--- 323
Query: 121 QELCFGENKNVGFSGLVE---MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
E+ F +V M Y +++RG + + + E M G +
Sbjct: 324 ------EDAVTVFDDMVRKDYMPNVVTYTVLIRGLCHVGKIDRAMKLMERMKGEGCEPVV 377
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKK-KGIKMDVVAYNTVIRAVGV---SEGVDFAMR 233
+Y++ + + G+ KA+ L++ M K + + YN +I A+ V +E + A R
Sbjct: 378 QTYNVLIRYSFEEGEIEKALCLFERMSKGEDCLPNQDTYNIIISAMFVRKRAEDMATAAR 437
Query: 234 VYREMREMGCQPSVVTCNTVIKLLCENG 261
+ EM E G P N V+ L G
Sbjct: 438 MVMEMVERGYLPRRFMLNRVLNGLMLTG 465
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 161/330 (48%), Gaps = 21/330 (6%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEA----QEL 123
T+ ++ ++EA G F++L E GL + +Y +L+ C+ +V +A +E+
Sbjct: 593 TYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEM 652
Query: 124 CF-GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
C G N ++ YN+++ G K + + +++++ RG+ + +Y+
Sbjct: 653 CIKGINPDI-----------VTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAA 701
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D CKS P A +L +EM +G+ D YN ++ E + A+ +++EM E G
Sbjct: 702 MVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG 761
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REIL 299
S V+ NT+I+ C++G+++EA +L EM +K +P+ +TY K E
Sbjct: 762 F-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAK 820
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
L+ M E + P TY LL + G + V ++++M G PD+ Y ++DA
Sbjct: 821 RLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAY 880
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPREELG 389
+G + A K +E+ KG+ K LG
Sbjct: 881 CREGNVMEACKLKDEILVKGMPMKSGFRLG 910
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 168/387 (43%), Gaps = 24/387 (6%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + RA E + ++ T TY+ +I+ L + + ++ M N P
Sbjct: 392 CRGQNMARAFELLDEMKKR-KLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLK-P 449
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELC 124
N + + + V E+ ++ E G L D Y +L+ C+ K + EA+
Sbjct: 450 NAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEAR--- 506
Query: 125 FGENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
+ L+EM + ++ Y + G+ K ++ EM GV+ ++
Sbjct: 507 ---------TYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVG 557
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
Y+ ++ CK G +A +++ + + + DV Y+ +I + + + A ++ E+
Sbjct: 558 IYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSEL 617
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI 298
+E G P+ T N++I C+ G V +A +L EM KG PD++TY+ L K EI
Sbjct: 618 QEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEI 677
Query: 299 ---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
LFD + G+ P TY ++ + + F + ++M G PD F YN +
Sbjct: 678 ERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVI 737
Query: 356 VDALIDKGMLDMARKYDEEMFAKGLSA 382
++ + + A +EM KG ++
Sbjct: 738 LNFCCKEEKFEKALDLFQEMLEKGFAS 764
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 155/354 (43%), Gaps = 17/354 (4%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKR 76
+ N + C + D ++++ K D + L M D +P+ T+ I+
Sbjct: 227 YTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDK-GLVPDLYTYDILING 285
Query: 77 YVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSG 135
+ EA ++ + GLK E ++Y L+D + +A + K+ +
Sbjct: 286 FCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRI-----KDEMVAC 340
Query: 136 LVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK 195
+E N I+N +L G K K E +EM ++GV D +YS+ ++ C+ +
Sbjct: 341 GIEANLI-IWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMAR 399
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A +L EMKK+ + V+ Y+ +I + + + REM G +P+ V T++
Sbjct: 400 AFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMT 459
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCLEKPREILGLFDRMIESG 309
+ GRV E+ +L M ++G +PDV Y+ C + +E+ R L M+E
Sbjct: 460 AHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLM---EMLERR 516
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
+RP TY + + + G + + +M G P+ Y AL++ +G
Sbjct: 517 LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEG 570
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 119/296 (40%), Gaps = 58/296 (19%)
Query: 98 LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSW 157
L D +Y N++ A C+ +V +A+ + L+EM + K
Sbjct: 221 LPDVYTYTNMISAHCKVGNVKDAKRV------------LLEMGE------------KARL 256
Query: 158 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
+ E M +G+V DL++Y I ++ C + +A + EM G+K + + YN
Sbjct: 257 LDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNA 316
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
+I ++ A R+ EM G + +++ NT++ +C+ G++ +A ++ EM
Sbjct: 317 LIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM---- 372
Query: 278 CVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVW 337
+E G+ P TY +L+ R + F +
Sbjct: 373 ----------------------------MEKGVEPDSQTYSLLIEGHCRGQNMARAFELL 404
Query: 338 KKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLV 393
+M++ +P Y+ +++ L G L EM GL KP + T L+
Sbjct: 405 DEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGL--KPNAVVYTTLM 458
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 108/242 (44%), Gaps = 22/242 (9%)
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
+ + MD K G +AV ++ K + +++ N+++ + V+ +V+ M
Sbjct: 157 FDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMC 216
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK-----------------GCVPDV 282
P V T +I C+ G V++A VL EM +K G VPD+
Sbjct: 217 AHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDL 276
Query: 283 ITYHCFFR--CLEK-PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
TY C+EK RE + MI+ G++P+ TY L+ F R G + F + +
Sbjct: 277 YTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDE 336
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDG 399
M G + +N L++ + G ++ A + +EM KG+ +P + + L++G G
Sbjct: 337 MVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGV--EPDSQTYSLLIEGHCRG 394
Query: 400 EQ 401
+
Sbjct: 395 QN 396
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 140/326 (42%), Gaps = 50/326 (15%)
Query: 100 DEVSYCNLVDALCE---YKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMS 156
D+ ++ LV+ LC+ KH IE ++ E G+ V YN ++ G K+
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE----GYDPDV-----YTYNSVISGLCKLG 344
Query: 157 WWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
+ E ++M R + +Y+ + +CK + +A +L + + KGI DV +N
Sbjct: 345 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 404
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
++I+ + ++ AM ++ EMR GC+P T N +I LC G++ EA +L +M
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 277 GCVPDVITYHCF---FRCLEKPREILGLF------------------------------- 302
GC VITY+ F K RE +F
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 303 ----DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
D+MI G +P TY LL F R G ++ + + M GC PD Y L+
Sbjct: 525 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAKP 384
L G +++A K + KG++ P
Sbjct: 585 LCKAGRVEVASKLLRSIQMKGINLTP 610
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 183/444 (41%), Gaps = 75/444 (16%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D AL FN +F+ Y ++ LG+ FD ++ MK + + +T
Sbjct: 62 DDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEM-GTST 120
Query: 70 FRIMFKRYVTAHLVNEAMGTFN-KLDEFGLKDEVSYCN-----LVDA----LCEYKHV-- 117
F I+ + Y L +E + + +DEFGLK + + N LVD L E H
Sbjct: 121 FLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKM 180
Query: 118 -------------IEAQELCFGEN--------KNVGFSGLVEMNKTKIYNMILRGW---- 152
+ + LC +++ GLV KT + +++G+
Sbjct: 181 SVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKT--FTTVMQGYIEEG 238
Query: 153 --------------FKMSW---------WGKCRE--------FWEEM-DKRGVVKDLHSY 180
F SW G C+E F +EM ++ G D +++
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTF 298
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ ++ +CK+G A+++ M ++G DV YN+VI + V A+ V +M
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT 358
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPREI 298
C P+ VT NT+I LC+ +V EA + + KG +PDV T++ + CL + +
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV 418
Query: 299 -LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ LF+ M G P TY ML+ G L + K+ME GC+ YN L+D
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Query: 358 ALIDKGMLDMARKYDEEMFAKGLS 381
A + +EM G+S
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVS 502
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 176/395 (44%), Gaps = 37/395 (9%)
Query: 6 CYANDWKRALEFFNWVET-DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C + K A+E + + T DC + T TYN++I L K + + + L R+ + +
Sbjct: 341 CKLGEVKEAVEVLDQMITRDC--SPNTVTYNTLISTLCKENQVEEATELA-RVLTSKGIL 397
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ TF + + AM F ++ G + DE +Y L+D+LC + EA +
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
K + SG T YN ++ G+ K + + E ++EM+ GV ++ +Y+
Sbjct: 458 L----KQMELSGCARSVIT--YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D +CKS + A +L +M +G K D YN+++ + A + + M GC
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILG 300
+P +VT T+I LC+ GRV A +L + KG Y+ + L + R E +
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAIN 631
Query: 301 LFDRMIESG-IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
LF M+E P +Y ++ R G P A + LV+ L
Sbjct: 632 LFREMLEQNEAPPDAVSYRIVFRGLCNGG-----------------GPIREAVDFLVE-L 673
Query: 360 IDKGML-DMARKYDEEMFAKGLSAKPREELGTKLV 393
++KG + + + Y M A+GL EE KLV
Sbjct: 674 LEKGFVPEFSSLY---MLAEGLLTLSMEETLVKLV 705
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 152/368 (41%), Gaps = 23/368 (6%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A K A+E + + + + TYNSVI L K E + ++ +M S P
Sbjct: 306 CKAGHVKHAIEIMDVMLQE-GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS-P 363
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCF 125
N T+ + + V EA L G+ +V C + +I Q LC
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDV---------CTFNSLI--QGLCL 412
Query: 126 GENKNVGFSGLVEMNKTK------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
N V EM YNM++ + ++M+ G + + +
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y+ +D CK+ K +A +++ EM+ G+ + V YNT+I + S V+ A ++ +M
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR--E 297
G +P T N+++ C G +++A ++ M GC PD++TY L K E
Sbjct: 533 MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592
Query: 298 ILGLFDRMIE-SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM-EELGCSPDEFAYNAL 355
+ R I+ GI Y +++ R ++++M E+ PD +Y +
Sbjct: 593 VASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIV 652
Query: 356 VDALIDKG 363
L + G
Sbjct: 653 FRGLCNGG 660
>gi|226497014|ref|NP_001152455.1| GTP binding protein [Zea mays]
gi|195656487|gb|ACG47711.1| GTP binding protein [Zea mays]
Length = 455
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 132/278 (47%), Gaps = 12/278 (4%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
+L FF + FTH D S++ + G L L + D P S + F ++
Sbjct: 100 SLRFFLFAAAMPGFTHLPD---SLLILAGSLAGTRLFPLLRSLLSDLPRSALSRDLFPLL 156
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENK-NVG 132
F+ Y A L +A+ F+ ++ F V+ + + + ++E E F E+
Sbjct: 157 FRAYARAGLPEDAIRAFSSMERFCFLPTVADLHSLLFTLSHNGLVEHAEAFFRESPFQFD 216
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
S K Y +++ GW ++ K ++ ++EM +RGV D+ +Y+ +D +C+ G
Sbjct: 217 LSA-------KTYTILISGWAVVASPVKAQKLFDEMIERGVQPDVPAYNALIDALCRGGD 269
Query: 193 PWKAVKLYKEMKK-KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
A + K+M++ +G+ D Y +R+ S+ A+RV MR P+V T N
Sbjct: 270 VALAQEQLKDMQRSRGLAPDAATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFTYN 329
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF 289
VI+LLCE G V E+Y +L EM G PDV +Y+
Sbjct: 330 AVIRLLCELGEVDESYNILNEMATYGEKPDVWSYNTLL 367
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 87/242 (35%), Gaps = 44/242 (18%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDK---RGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
++ ++ R + + + M++ V DLHS + + +G A +
Sbjct: 152 LFPLLFRAYARAGLPEDAIRAFSSMERFCFLPTVADLHSL---LFTLSHNGLVEHAEAFF 208
Query: 201 KEMKKKGIKMDVVA--YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
+E + D+ A Y +I V A +++ EM E G QP V N +I LC
Sbjct: 209 RE---SPFQFDLSAKTYTILISGWAVVASPVKAQKLFDEMIERGVQPDVPAYNALIDALC 265
Query: 259 ENGRVREAYAVLAEMPK-KGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTY 317
G V A L +M + +G PD TY F R ++
Sbjct: 266 RGGDVALAQEQLKDMQRSRGLAPDAATYGPFLRSACASKDA------------------- 306
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
R V +M +P+ F YNA++ L + G +D + EM
Sbjct: 307 -------------RAALRVLDRMRARSLTPNVFTYNAVIRLLCELGEVDESYNILNEMAT 353
Query: 378 KG 379
G
Sbjct: 354 YG 355
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 155/360 (43%), Gaps = 52/360 (14%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P T+ I+ AH A+ F +L GL+ D + +L+ CE K EA ++
Sbjct: 111 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 170
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVV--KDLHSYS 181
+G + YN++L+ G+ + M + G V D+ +Y+
Sbjct: 171 LLHRTPELGC-----VPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYN 225
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF----------- 230
+D K G KA L+KEM ++GI D+V Y++V+ A+ + +D
Sbjct: 226 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNK 285
Query: 231 ------------------------AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
A+RV++EMR P VV NT++ LC+ G+++EA
Sbjct: 286 GVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEA 345
Query: 267 YAVLAEMPKKGCVPDVITYHCFFR------CLEKPREILGLFDRMIESGIRPKMDTYVML 320
V M KG PDV +Y CL ++ LFD M+ GI P + T+ +L
Sbjct: 346 RDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLV---DMTDLFDLMLGDGIAPVICTFNVL 402
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
++ + G L +++ +M + G P Y ++ AL G +D A + +M +G+
Sbjct: 403 IKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGV 462
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 156/387 (40%), Gaps = 82/387 (21%)
Query: 83 VNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
VN+A F ++ + G+ D V+Y ++V ALC+ + + +A+ + + G++ N
Sbjct: 237 VNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFL----RQMVNKGVLPDNW 292
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
T YN ++ G+ W + ++EM ++ ++ D+ + + M +CK GK +A ++
Sbjct: 293 T--YNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD 350
Query: 202 EMKKKGIKMDVVAY-----------------------------------NTVIRAVGVSE 226
M KG DV +Y N +I+A
Sbjct: 351 TMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCG 410
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
+D AM ++ EMR+ G +P VVT TVI LC G++ +A +M +G VPD YH
Sbjct: 411 MLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYH 470
Query: 287 CFFR------CLEKPREILG--------------------------------LFDRMIES 308
C + L K +E++ +FD +
Sbjct: 471 CLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNV 530
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G+ P Y ML+ + G + V+ M G P+ Y LV+ G +D
Sbjct: 531 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEG 590
Query: 369 RKYDEEMFAKGLSAKPREELGTKLVQG 395
EM KG+ KP L ++ G
Sbjct: 591 LSLFREMLQKGI--KPSTILYNIIIDG 615
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 168/383 (43%), Gaps = 36/383 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+SV+ L K D + + +M N +P++ T+ + Y + EA+ F +
Sbjct: 258 TYSSVVHALCKARAMDKAEAFLRQMV-NKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKE 316
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL-----CFGENKNVGFSGLVEMN--KTK- 143
+ L D V+ L+ +LC+Y + EA+++ G+N +V FS + +N TK
Sbjct: 317 MRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDV-FSYTIMLNGYATKG 375
Query: 144 ----------------------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
+N++++ + K + EM GV + +Y
Sbjct: 376 CLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYM 435
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+ +C+ GK A++ + +M +G+ D AY+ +I+ + A + E+
Sbjct: 436 TVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNN 495
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CL-EKPREI 298
G + +V ++I LC+ GRV +A + G PD + Y+ CL K +
Sbjct: 496 GMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKA 555
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
L +FD M+ +GI P + Y L+ + + G + ++++M + G P YN ++D
Sbjct: 556 LRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDG 615
Query: 359 LIDKGMLDMARKYDEEMFAKGLS 381
L + G A+ EM G++
Sbjct: 616 LFEAGRTVPAKVKFHEMTESGIA 638
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 170/384 (44%), Gaps = 18/384 (4%)
Query: 4 LSCYAN--DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+ YAN +A+ FN + H TY +VI L + + D + ++M D
Sbjct: 403 IKAYANCGMLDKAMIIFNEMRDHGVKPHVV-TYMTVIAALCRIGKMDDAMEKFNQMIDQ- 460
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA 120
+P+ + + + + T + +A +++ G++ D V + ++++ LC+ V++A
Sbjct: 461 GVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDA 520
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
Q + F NVG +YNM++ G+ + K ++ M G+ ++ Y
Sbjct: 521 QNI-FDLTVNVGLH-----PDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGY 574
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
++ CK G+ + + L++EM +KGIK + YN +I + + A + EM E
Sbjct: 575 GTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTE 634
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---E 297
G + T + V++ L +N EA + E+ D+IT + + + R E
Sbjct: 635 SGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEE 694
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
LF + SG+ P TY +++ + G + ++ M+ GC PD N +V
Sbjct: 695 AKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVR 754
Query: 358 ALIDKGMLDMARKY----DEEMFA 377
L+ K + A Y DE F+
Sbjct: 755 ELLKKNEIVRAGAYLSKIDERNFS 778
>gi|255552808|ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543458|gb|EEF44989.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 177/376 (47%), Gaps = 19/376 (5%)
Query: 3 TLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPS 62
+L DW+R+L +W+ ++ + YN V+ + + ++DL+ L M+
Sbjct: 106 SLISQEADWQRSLALLDWINEVARYSPSVFAYNVVLRNVLRAKKWDLAHGLFDEMRQRAL 165
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVD---ALCEYKHVI 118
S P+ T+ + + A + +E++ ++++ + D V Y NL++ LC+Y I
Sbjct: 166 S-PDRYTYSTLITSFGKAGMFDESLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAI 224
Query: 119 EAQELCFGENKNVGFS-GLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
F K G + LV YN ++ + K + + R EM + GV+ D
Sbjct: 225 S----IFMRLKRSGITPDLVA------YNSMINVFGKARLFREARMLVHEMREVGVLPDT 274
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
SYS + + ++ K +A+ ++ EM + +D++ N +I G + V A R++
Sbjct: 275 VSYSTLLSVYVENEKFVEALSVFAEMNEANCSLDLMTCNIMIDVYGQLDMVKEADRLFWS 334
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
MR+MG +P+VV+ NT++K+ E EA + M +K +V+TY+ + K E
Sbjct: 335 MRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 394
Query: 298 ---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
L M + GI P TY ++ +G+ G L ++++K+ G D+ Y
Sbjct: 395 HEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQT 454
Query: 355 LVDALIDKGMLDMARK 370
++ A G++ A++
Sbjct: 455 MIVAYERAGLVAHAKR 470
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 175/382 (45%), Gaps = 44/382 (11%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D+ +A+ F ++ T YNS+I++ GK F + L+H M++ +P+ +
Sbjct: 219 DYSKAISIFMRLKR-SGITPDLVAYNSMINVFGKARLFREARMLVHEMRE-VGVLPDTVS 276
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGEN 128
+ + YV EA+ F +++E ++ CN ++D + V EA L F
Sbjct: 277 YSTLLSVYVENEKFVEALSVFAEMNEANCSLDLMTCNIMIDVYGQLDMVKEADRL-FWSM 335
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
+ +G +E N YN +L+ + + +G+ + M ++ + +++ +Y+ + I
Sbjct: 336 RKMG----IEPNVVS-YNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 390
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ---- 244
KS + KA L +EM+K+GI+ + + Y+T+I G + +D A +++++R G +
Sbjct: 391 KSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQV 450
Query: 245 ---------------------------PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
P ++ +T IK+L GR+ EA V + G
Sbjct: 451 LYQTMIVAYERAGLVAHAKRLLHDLKCPDIIPRDTAIKILARAGRIEEATWVFRQAFDAG 510
Query: 278 CVPDVITYHC---FFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
V D+ + C F ++P ++ +F++M +G P D ++L +G+
Sbjct: 511 EVKDISVFRCMIELFSRNKRPANVVEVFEKMRGAGYFPDSDVIALVLNAYGKLREFEKAD 570
Query: 335 VVWKKMEELGCS-PDEFAYNAL 355
V+++M+E C PDE + L
Sbjct: 571 AVYREMQEEECVFPDEVHFQML 592
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 172/403 (42%), Gaps = 41/403 (10%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+ +D ALE+F + F HT TY +I+ L E D L+ +MK S +
Sbjct: 52 HEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISC-S 110
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCF 125
F + Y A +A+ TF ++ +F +K V Y +++DAL + ++ + +
Sbjct: 111 EDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLD-ENRFQMINPIY 169
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
K G V YN++L+ K + + EM +G D SY+ +
Sbjct: 170 SNMKKDGMEPNV-----FTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLIS 224
Query: 186 IMCKSGK------------PW------------------KAVKLYKEMKKKGIKMDVVAY 215
+CK GK P +A +L EM KGI +V++Y
Sbjct: 225 SLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISY 284
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
T+I A+ + V+ ++ V +M GC P++ T ++IK G EA M +
Sbjct: 285 TTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIR 344
Query: 276 KGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
+G VP+V+ Y+ L R + + +F++M +G P + TY L+ + + G L
Sbjct: 345 EGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDG 404
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
VW M GC P+ AY +VD L M + A E M
Sbjct: 405 ASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENM 447
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 166/380 (43%), Gaps = 25/380 (6%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A ++AL+ F ++ D T YN ++D L F + + MK + PN
Sbjct: 124 AGSSEQALKTFYRMQ-DFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGME-PNV 181
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFG 126
T+ I+ K + V+ A ++ G DEVSY L+ +LC+ V EA+EL
Sbjct: 182 FTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMS 241
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
+V +YN ++ G K + + + +EM +G+ ++ SY+ ++
Sbjct: 242 FTPSV-----------PVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINA 290
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV----GVSEGVDFAMRVYREMREMG 242
+ +G ++ + +M +G ++ + ++I+ G E +DF R+ RE G
Sbjct: 291 LSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIRE----G 346
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG-- 300
P+VV N ++ LC + +A +V +M GC P+V TY K ++ G
Sbjct: 347 VVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGAS 406
Query: 301 -LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+++ MI G P + Y ++ R + + + M+ C P+ +N + L
Sbjct: 407 EVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGL 466
Query: 360 IDKGMLDMARKYDEEMFAKG 379
G +D A K ++M G
Sbjct: 467 CGSGRVDWAIKVFDQMGNSG 486
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 166/357 (46%), Gaps = 19/357 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+Y ++I+ L +LS ++ +M S PN TF + K + +EA+ +++
Sbjct: 283 SYTTIINALSDAGNVELSLAVLAKMFARGCS-PNLHTFTSLIKGFFLKGGSHEALDFWDR 341
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN----KTKIYNM 147
+ G+ + V+Y L+ LC + + +A V +E+N + Y+
Sbjct: 342 MIREGVVPNVVAYNALMHGLCSKRSLGDA----------VSVFNQMEINGCCPNVRTYSA 391
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++ G+ K E W M G ++ +Y+ +D++C++ +A L + M+ +
Sbjct: 392 LIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVEN 451
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ V +NT I+ + S VD+A++V+ +M GC P+ T N ++ L ++ R EA+
Sbjct: 452 CPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAF 511
Query: 268 AVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
++ +M +G +++TY+ + C E L L +M+ G +P T +++ +
Sbjct: 512 GLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAY 571
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ G + + ++ PD AY +L+ + ++ A Y M ++G+S
Sbjct: 572 CKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGIS 628
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 137/309 (44%), Gaps = 35/309 (11%)
Query: 89 TFNKLDEFGLK----DEVSYCNLVDALCEYKHV-----IEAQELCFGENKNVGFSGLVEM 139
F LDE K + +SY +++AL + +V + A+ G + N+
Sbjct: 265 AFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNL-------- 316
Query: 140 NKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKL 199
+ +++G+F + +FW+ M + GVV ++ +Y+ M +C AV +
Sbjct: 317 ---HTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSV 373
Query: 200 YKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCE 259
+ +M+ G +V Y+ +I + +D A V+ M GC P+VV ++ +LC
Sbjct: 374 FNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCR 433
Query: 260 NGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDT 316
N +AY ++ M + C P+ +T++ F + L + + +FD+M SG P T
Sbjct: 434 NSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTT 493
Query: 317 YVMLL------RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
Y LL R+FG F + K ME G + YN ++ GML A +
Sbjct: 494 YNELLDSLLKDRRFGE------AFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALE 547
Query: 371 YDEEMFAKG 379
+M +G
Sbjct: 548 LLGKMVVRG 556
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 151/360 (41%), Gaps = 21/360 (5%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
FT + YN++I+ + K + F+ ++ L+ M N PN ++ + A V +
Sbjct: 242 FTPSVPVYNALINGVCKEYTFEEAFQLLDEMM-NKGIDPNVISYTTIINALSDAGNVELS 300
Query: 87 MGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGF------SGLVEMN 140
+ K+ G L + +I+ L G ++ + F G+V
Sbjct: 301 LAVLAKMFARGCSPN---------LHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVP-- 349
Query: 141 KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
YN ++ G G + +M+ G ++ +YS +D K+G A +++
Sbjct: 350 NVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVW 409
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
M G +VVAY ++ + + + A + M+ C P+ VT NT IK LC +
Sbjct: 410 NWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGS 469
Query: 261 GRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTY 317
GRV A V +M GC P+ TY+ L K R E GL M GI + TY
Sbjct: 470 GRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTY 529
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
++ + G L + KM G PD N ++DA +G +++A + + + A
Sbjct: 530 NTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSA 589
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 4/207 (1%)
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
++G +A+K + M+ +K V YN ++ A+ +Y M++ G +P+V
Sbjct: 123 RAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVF 182
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIES 308
T N ++K LC+N RV A+ +L EM KGC PD ++Y L K ++ R +
Sbjct: 183 TYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA--RELAM 240
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
P + Y L+ + F + +M G P+ +Y +++AL D G ++++
Sbjct: 241 SFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELS 300
Query: 369 RKYDEEMFAKGLSAKPREELGTKLVQG 395
+MFA+G S P T L++G
Sbjct: 301 LAVLAKMFARGCS--PNLHTFTSLIKG 325
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 125/271 (46%), Gaps = 15/271 (5%)
Query: 8 ANDWKRALEFFNWVETD-CHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
A D A E +NW+ T CH Y ++D+L + F+ ++ LI M+ + PN
Sbjct: 399 AGDLDGASEVWNWMITHGCH--PNVVAYTCMVDVLCRNSMFNQAYCLIENMQVE-NCPPN 455
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCF 125
TF K + V+ A+ F+++ G + +Y L+D+L + + EA F
Sbjct: 456 TVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEA----F 511
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
G K++ G +E+N YN I+ G+ G+ E +M RG D + +I +D
Sbjct: 512 GLVKDMEHRG-IELNLVT-YNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVID 569
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
CK GK A++L + D++AY ++I + GV+ A+ R M G P
Sbjct: 570 AYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISP 629
Query: 246 SVVTCNTVIKLLCEN----GRVREAYAVLAE 272
+V T N +++ L N G V+ AVL
Sbjct: 630 NVATWNVLVRHLFSNMGHSGAVQFLDAVLGS 660
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 9/222 (4%)
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
+ F+ D R V + Y+ +D + + +Y MKK G++ +V YN +++A
Sbjct: 132 KTFYRMQDFR-VKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKA 190
Query: 222 VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
+ + VD A ++ EM GC P V+ T+I LC+ G+V+EA + P
Sbjct: 191 LCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSF-----TPS 245
Query: 282 VITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWK 338
V Y+ + K E L D M+ GI P + +Y ++ G + V
Sbjct: 246 VPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLA 305
Query: 339 KMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
KM GCSP+ + +L+ KG A + + M +G+
Sbjct: 306 KMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGV 347
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 117/264 (44%), Gaps = 10/264 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PN T+ + Y A ++ A +N + G + V+Y +VD LC ++ + Q
Sbjct: 384 PNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLC--RNSMFNQAY 441
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
C EN V T +N ++G + +++M G + +Y+
Sbjct: 442 CLIENMQVENCP----PNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNEL 497
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D + K + +A L K+M+ +GI++++V YNT+I + + A+ + +M G
Sbjct: 498 LDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGT 557
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILG 300
+P +T N VI C+ G+V A ++ + PD+I Y C E +
Sbjct: 558 KPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIV 617
Query: 301 LFDRMIESGIRPKMDTYVMLLRKF 324
RM+ GI P + T+ +L+R
Sbjct: 618 YLRRMLSEGISPNVATWNVLVRHL 641
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 163/372 (43%), Gaps = 45/372 (12%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F+ T+N +I + DL+ + + + + P T+ I+ + Y+ ++EA
Sbjct: 75 FSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEA 134
Query: 87 MGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
+ +++ GL+ D +Y + LC+ V A E N ++ Y
Sbjct: 135 LKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVIT------Y 188
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N++LR W + ++ E+ RG ++ +YSI + +C+ GK ++V L K MK+
Sbjct: 189 NILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKE 248
Query: 206 KGIKMD-----------------------------------VVAYNTVIRAVGVSEGVDF 230
KG+ D +V YNT++ A+ + D
Sbjct: 249 KGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDH 308
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR 290
A+ ++ ++ E+GC P+V + NT++ L +G A ++++M KG PDVITY+
Sbjct: 309 AVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLIS 368
Query: 291 CLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
CL + E +GL M+ +P + +Y +L + + V M E GC P
Sbjct: 369 CLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQP 428
Query: 348 DEFAYNALVDAL 359
+E Y L++ +
Sbjct: 429 NETTYTLLIEGI 440
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 118/275 (42%), Gaps = 48/275 (17%)
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
+++G+F K ++K G D+ +Y+ + CK+ + A + MK+KG
Sbjct: 16 LIKGFFNSRNIDKATRVMGILEKHGK-PDVFAYNAVISGFCKANRIESAKTVLDRMKRKG 74
Query: 208 IKMDVVAYN------------------------------------TVIRAVGVSEGVDFA 231
DVV +N +I A + G+D A
Sbjct: 75 FSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEA 134
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC 291
+++ EM G +P T N + + LC+ G+V A+ + + +GC PDVITY+ R
Sbjct: 135 LKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRA 194
Query: 292 L-------EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
L E + + +F R G P + TY +L+ R G + + K M+E G
Sbjct: 195 LLNQGKWDEGEKWMSEIFSR----GCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKG 250
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+PD + Y+ L+ A +G LDMA ++ + M G
Sbjct: 251 LTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDG 285
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 185/412 (44%), Gaps = 38/412 (9%)
Query: 4 LSCYANDWK--RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
L+C K AL F+ ++ D TYN +ID+L + ++ + M +
Sbjct: 358 LTCLGKKRKVDEALTLFDVMKKDAK--PNISTYNIIIDMLCMAGRVNEAYKIRDEM-ELA 414
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA 120
PN + IM R A+ + EA F E G + V+YC+L+D L + + +A
Sbjct: 415 GLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDA 474
Query: 121 QELC-----FGENKN-VGFSGLV--------EMNKTKIYN-MILRGW------------- 152
L G + N + ++ L+ + + KIY MI RG
Sbjct: 475 YRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDC 534
Query: 153 -FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
FK K R +E+M G + D+ SYSI + + K+G+ + +++ M ++G +D
Sbjct: 535 VFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALD 594
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
AYN V+ + S VD A V EM+ P+V T +++ L + R+ EAY +
Sbjct: 595 ARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFE 654
Query: 272 EMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
E KG +VI Y F + + E + + M++ G+ P + T+ L+ +
Sbjct: 655 EAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTE 714
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + ++ M+E+ CSP+ + Y+ L++ L + A + +EM +GL
Sbjct: 715 EIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGL 766
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 168/364 (46%), Gaps = 16/364 (4%)
Query: 6 CYANDWKRALEFF-NWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C AN + A F + E C+ + TY S+ID LGK + D ++ L +M D
Sbjct: 431 CKANQLEEAHRIFESASERGCN--PNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDA 488
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNL-VDALCEYKH-VIEAQE 122
N + + + + + + ++ G + +++ N +D C +K +E
Sbjct: 489 -NPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMD--CVFKAGEVEKGR 545
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
F + K+ GF + + Y++++ G K + ++ M ++G D +Y+
Sbjct: 546 AIFEDMKSFGF-----LPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNA 600
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D +CKSGK KA ++ +EMK K + V Y +++ + + +D A ++ E + G
Sbjct: 601 VVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKG 660
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---L 299
+ +V+ +++I + GR+ EAY +L EM KKG P+V T++ L K EI L
Sbjct: 661 IELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEAL 720
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
F M E P TY +L+ R FV W++M++ G P+ Y ++ L
Sbjct: 721 ICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGL 780
Query: 360 IDKG 363
G
Sbjct: 781 AKVG 784
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 172/407 (42%), Gaps = 43/407 (10%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSW--NLIHRMKDNPSSIPNHATFR 71
A FF D YN+V+ F DL+ ++ M +PN A
Sbjct: 91 AAPFFLLASASSSQPLPPDAYNAVL----PFLSHDLAALEKVLEEMSHLGYGLPNPACAA 146
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKN 130
++ V + + +A + + S Y L+ AL E + A EL + ++
Sbjct: 147 LV-ATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALEL-LRQMQD 204
Query: 131 VGFSGLVEMNKTKIYNMILRGWFKMSWW------GKCRE--------------------- 163
VG+ V + T + + G + + G C E
Sbjct: 205 VGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDM 264
Query: 164 ---FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIR 220
F+ E+ G+ D SY+ + ++CK+G+ +A +L+ +M+ + AYNT+I
Sbjct: 265 AWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIM 324
Query: 221 AVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVP 280
G +E D A ++ +RE GC PSVV+ N+++ L + +V EA + M KK P
Sbjct: 325 GYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM-KKDAKP 383
Query: 281 DVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVW 337
++ TY+ L + E + D M +G+ P + + +++ + + L ++
Sbjct: 384 NISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIF 443
Query: 338 KKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
+ E GC+P+ Y +L+D L KG +D A + E+M G A P
Sbjct: 444 ESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANP 490
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 168/385 (43%), Gaps = 49/385 (12%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMK------DNPS------------------------- 62
YN ID GK D++W H +K D+ S
Sbjct: 249 YNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQME 308
Query: 63 ---SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVI 118
+P + M Y +A ++A +L E G + VS+ +++ L + + V
Sbjct: 309 AERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVD 368
Query: 119 EAQELCFGENKNVGFSGLVEMNKTKI--YNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
EA L F + + K I YN+I+ + + +EM+ G+ +
Sbjct: 369 EALTL---------FDVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPN 419
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
L S +I +D +CK+ + +A ++++ ++G + V Y ++I +G +D A R++
Sbjct: 420 LLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFE 479
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR 296
+M + G + + ++I+ +GR + + + EM ++G PD+ + + C+ K
Sbjct: 480 KMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAG 539
Query: 297 EI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
E+ +F+ M G P + +Y +L+ + G R +++ M + G + D AYN
Sbjct: 540 EVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYN 599
Query: 354 ALVDALIDKGMLDMARKYDEEMFAK 378
A+VD L G +D A + EEM K
Sbjct: 600 AVVDGLCKSGKVDKAYEVLEEMKVK 624
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 120/248 (48%), Gaps = 9/248 (3%)
Query: 102 VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKC 161
+Y ++VD L + + EA L F E K+ G +E+N +Y+ ++ G+ K+ +
Sbjct: 631 ATYGSIVDGLAKIDRLDEAYML-FEEAKSKG----IELN-VILYSSLIDGFGKVGRIDEA 684
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
EEM K+G+ ++++++ MD + K+ + +A+ ++ MK+ + Y+ +I
Sbjct: 685 YLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILING 744
Query: 222 VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
+ + + A ++EM++ G P+VVT T+I L + G + +AY++ G +PD
Sbjct: 745 LCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPD 804
Query: 282 VITYHCFFRCLE---KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWK 338
+++ + +P E +F+ G R + T + LL + L +V
Sbjct: 805 SASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQAAIVGA 864
Query: 339 KMEELGCS 346
+ E+ S
Sbjct: 865 VLSEIAKS 872
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 161/376 (42%), Gaps = 46/376 (12%)
Query: 50 SWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLV 108
+ NL H+M + PN TF + + EA+ +++ E GL+ +++Y +V
Sbjct: 168 ALNLFHQMFETTCR-PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226
Query: 109 DALC----------------EYKHVIE--------AQELCFGENKNVGFSGLVEMNKTKI 144
D +C E H+I LC + + EM + I
Sbjct: 227 DGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
Query: 145 ------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK 198
YN ++ G+ W + +EM +R + D+ +Y+ ++ K GK ++A +
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEE 346
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
LY EM +GI + + Y+++I +D A ++ M GC P+++T NT+I C
Sbjct: 347 LYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMD 315
R+ + +L EM + G V D TY+ F + L L MI SG+ P +
Sbjct: 407 GAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIV 466
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEEL-----------GCSPDEFAYNALVDALIDKGM 364
T LL G L+ ++K M++ G PD YN L+ LI++G
Sbjct: 467 TCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGK 526
Query: 365 LDMARKYDEEMFAKGL 380
A + EEM +G+
Sbjct: 527 FLEAEELYEEMPHRGI 542
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 168/387 (43%), Gaps = 35/387 (9%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TY +++D + K + + NL+ +M++ IPN + + ++A
Sbjct: 218 TQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Query: 90 FNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI---- 144
F ++ E G+ D +Y +++ C +A++L L EM + KI
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL------------LQEMLERKISPDV 325
Query: 145 --YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
YN ++ + K + + E ++EM RG++ + +YS +D CK + A ++
Sbjct: 326 VTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYL 385
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M KG +++ +NT+I ++ +D M + EM E G T NT+I G
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIES----------- 308
+ A +L EM G PD++T L K ++ L +F M +S
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G+ P + TY +L+ G ++++M G PD Y++++D L + LD A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 369 RKYDEEMFAKGLSAKPREELGTKLVQG 395
+ + M +K S P T L+ G
Sbjct: 566 TQMFDSMGSKSFS--PNVVTFTTLING 590
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 141/322 (43%), Gaps = 17/322 (5%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGE 127
+F I+ K + + + A+ TF K+ + GL D V++ L+ LC V EA L
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNL---- 171
Query: 128 NKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F + E + ++ G + + + M + G+ +Y +
Sbjct: 172 -----FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226
Query: 185 DIMCKSGKPWKAVKLYKEMKK-KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
D MCK G A+ L ++M++ I +VV Y+ +I ++ A ++ EM+E G
Sbjct: 227 DGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILG 300
P + T N++I C +GR +A +L EM ++ PDV+TY+ K E
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEE 346
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L+D M+ GI P TY ++ F + L ++ M GCSP+ +N L+D
Sbjct: 347 LYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406
Query: 361 DKGMLDMARKYDEEMFAKGLSA 382
+D + EM GL A
Sbjct: 407 GAKRIDDGMELLHEMTETGLVA 428
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 154/347 (44%), Gaps = 32/347 (9%)
Query: 33 TYNSVIDIL---GKFFEFDLSWN-LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
TYN++I+ GKFFE + ++ ++ R IPN T+ M + + ++ A
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPR-----GIIPNTITYSSMIDGFCKQNRLDAAEH 381
Query: 89 TFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
F + G +++ L+D C K + + EL + +GLV T YN
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTE----TGLVA--DTTTYNT 435
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK- 206
++ G++ + + +EM G+ D+ + +D +C +GK A++++K M+K
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495
Query: 207 ----------GIKMDVVAYNTVIRAVGVSEGVDF-AMRVYREMREMGCQPSVVTCNTVIK 255
G++ DV YN +I + ++EG A +Y EM G P +T +++I
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGL-INEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRP 312
LC+ R+ EA + M K P+V+T+ K + L LF M GI
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 614
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
TY+ L+ F + G + ++++M G PD ++ L
Sbjct: 615 NAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 119/260 (45%), Gaps = 45/260 (17%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+++M+++ + D++S++I + C K A+ + ++ K G+ DVV + T++ +
Sbjct: 100 SLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGL 159
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
V + V A+ ++ +M E C+P+VVT T++ LC GR+ EA A+L M + G P
Sbjct: 160 CVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219
Query: 283 ITYHC----------------FFRCLEKPREIL-----------------------GLFD 303
ITY R +E+ I+ LF
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT 279
Query: 304 RMIESGIRPKMDTYVMLLRKF---GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
M E GI P + TY ++ F GRW + ++M E SPD YNAL++A +
Sbjct: 280 EMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL---QEMLERKISPDVVTYNALINAFV 336
Query: 361 DKGMLDMARKYDEEMFAKGL 380
+G A + +EM +G+
Sbjct: 337 KEGKFFEAEELYDEMLPRGI 356
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
GE+ GF G K+ + G+ ++ + + +M + + + + M
Sbjct: 36 GESCEAGFGG----ESLKLQS----GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMG 87
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
++ + +P + LY++M++K I+ D+ ++N +I+ + FA+ + ++ ++G P
Sbjct: 88 VVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHP 147
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLF 302
VVT T++ LC RV EA + +M + C P+V+T+ C E + E + L
Sbjct: 148 DVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALL 207
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG-CSPDEFAYNALVDALID 361
DRM+E G++P TY ++ + G + +KMEE+ P+ Y+A++D+L
Sbjct: 208 DRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCK 267
Query: 362 KGMLDMARKYDEEMFAKGL 380
G A+ EM KG+
Sbjct: 268 DGRHSDAQNLFTEMQEKGI 286
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 140/307 (45%), Gaps = 14/307 (4%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T TY+S+ID K D + ++ + M S PN TF + Y A +++ M
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS-PNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 91 NKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+++ E GL D +Y L+ + A +L E + G + T + +
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDL-LQEMISSGLCPDIVTCDTLLDGLCD 477
Query: 150 RGWFK--MSWWGKCREFWEEMDK----RGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
G K + + ++ +++D GV D+ +Y+I + + GK +A +LY+EM
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
+GI D + Y+++I + +D A +++ M P+VVT T+I C+ GRV
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 264 REAYAVLAEMPKKGCVPDVITY---HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVML 320
+ + EM ++G V + ITY C FR + L +F MI SG+ P DT +
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYP--DTITIR 655
Query: 321 LRKFGRW 327
G W
Sbjct: 656 NMLTGLW 662
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 123/287 (42%), Gaps = 52/287 (18%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N++ID D L+H M + + + T+ + + +N A+ +
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTET-GLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNV-------GFSGLVEMNKTKI 144
+ GL ++ C+ L+D LC+ + +A E+ K+ F+G VE + +
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNG-VEPD-VQT 513
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK--------------- 189
YN+++ G + + E +EEM RG+V D +YS +D +CK
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 190 --------------------SGKPWKAVKLYKEMKKKGIKMDVVAYNTVI---RAVGVSE 226
+G+ ++L+ EM ++GI + + Y T+I R VG
Sbjct: 574 SKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG--- 630
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
++ A+ +++EM G P +T ++ L ++ A A+L ++
Sbjct: 631 NINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 77/179 (43%), Gaps = 17/179 (9%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ I+ + EA + ++ G+ D ++Y +++D LC+ + EA ++
Sbjct: 509 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 568
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + FS V + ++ G+ K E + EM +RG+V + +Y
Sbjct: 569 -FDSMGSKSFSPNV-----VTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI----------RAVGVSEGVDFAM 232
+ K G A+ +++EM G+ D + ++ RAV + E + +M
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMSM 681
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 163/354 (46%), Gaps = 19/354 (5%)
Query: 34 YNSVIDILGK----FFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
YN++ID L K DL +I + P+ T+ + + + EA+G
Sbjct: 207 YNTIIDSLCKDKLVIHASDLCSEMIVK-----RIFPDVVTYTTLIYGCLIVGRLKEAVGL 261
Query: 90 FNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
FN++ +K +V N LVD LC+ + +A+ + K S +V YN +
Sbjct: 262 FNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVT------YNSL 315
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G+F + K + M +RGV D+ SYSI ++ +CK+ +AV L+KEM K +
Sbjct: 316 MDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSM 375
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ V YN++I + + A + EM G V+T ++++ LC+N +V +A
Sbjct: 376 APNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAIT 435
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFG 325
++ ++ +G P++ TY L K ++ ++ ++ G + Y +++
Sbjct: 436 LITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLC 495
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ G + KME+ GC PD Y LV AL + D A K EM +G
Sbjct: 496 KEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 166/385 (43%), Gaps = 11/385 (2%)
Query: 2 ETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP 61
+ L + ++ A+ FN + + +N ++ L K F + + +M+
Sbjct: 35 QPLPSFIDNVDDAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQ 94
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA 120
P+ TF I+ + +N A K+ + G D V+ L+ LC V EA
Sbjct: 95 IQ-PDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREA 153
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+ +V G +++ Y ++ G K + ++D V ++ Y
Sbjct: 154 LHF----HDDVIAKGF-HLDQVS-YGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMY 207
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ +D +CK A L EM K I DVV Y T+I + + A+ ++ +M
Sbjct: 208 NTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLL 267
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPRE 297
+P V T N ++ LC+ G +++A VLA M K+G +++TY+ + +++ +
Sbjct: 268 KNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENK 327
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+F+ M G+ P + +Y +++ + + ++K+M +P+ YN+L+D
Sbjct: 328 ATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLID 387
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSA 382
L+ G + A EM +G A
Sbjct: 388 GLLKYGRISDAWDLVNEMHNRGQPA 412
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 90/180 (50%), Gaps = 12/180 (6%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKD--NPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
T TYNS+ID L K+ +W+L++ M + P+ + T+ + H V++A+
Sbjct: 379 TVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADV---ITYSSLLDALCKNHQVDKAIT 435
Query: 89 TFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
K+ + G++ + +Y LVD LC+ + +AQ + + + G+ V+M YN+
Sbjct: 436 LITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAV-YQDLLIKGYHLDVKM-----YNV 489
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++ G K + + +M+ G + D +Y + + ++ K KAVKL +EM +G
Sbjct: 490 MVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 178/420 (42%), Gaps = 59/420 (14%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + K++L F + V F +Y +++ L K E + L+ ++D S+ P
Sbjct: 91 CLKGEVKKSLHFHDKVVAQ-GFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDR-STRP 148
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELC 124
+ + + LV+EA +++++ G+ D ++Y L+ C ++EA
Sbjct: 149 DVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEA---- 204
Query: 125 FGENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
F L EM I YN ++ K + + M K+GV D+
Sbjct: 205 --------FGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVV 256
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
YSI MD C G+ KA +++ M + G+ DV +YN +I + + VD AM + REM
Sbjct: 257 IYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREM 316
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI 298
P VT +++I LC+ GR+ + EM +G +++TY+ L K + +
Sbjct: 317 LHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNL 376
Query: 299 ---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP----------------------- 332
+ LF +M E GI+P TY L+ + G L+
Sbjct: 377 DKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVM 436
Query: 333 ------------VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ KME+ GC P+ + ++ +L++K D A K EM AKGL
Sbjct: 437 ISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGL 496
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 120/242 (49%), Gaps = 3/242 (1%)
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
T I N +++G K F +++ +G D SY I ++ +CK G+ A+KL +
Sbjct: 80 TIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLR 139
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
++ + + DVV Y+T+I + + VD A +Y EM G P V+T T+I C G
Sbjct: 140 TIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAG 199
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYV 318
++ EA+ +L EM K P++ TY+ L K +E L M + G++P + Y
Sbjct: 200 QLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYS 259
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+L+ + G ++ ++ M + G +PD ++YN +++ L +D A EM K
Sbjct: 260 ILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHK 319
Query: 379 GL 380
+
Sbjct: 320 NM 321
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 117/244 (47%), Gaps = 9/244 (3%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y ++L G K+ + ++ R D+ YS +D +CK +A LY EM
Sbjct: 118 YGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMN 177
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+GI DV+ Y T+I ++ + A + EM P++ T NT+I LC+ G+V+
Sbjct: 178 ARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVK 237
Query: 265 EAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPKMDTYV 318
E+ +LA M KKG PDV+ Y +C ++K ++I F M+++G+ P + +Y
Sbjct: 238 ESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQI---FLVMVQTGVNPDVYSYN 294
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+++ + + + ++M PD Y++L+D L G + +EM +
Sbjct: 295 IIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHR 354
Query: 379 GLSA 382
G A
Sbjct: 355 GQPA 358
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 131/285 (45%), Gaps = 13/285 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++ID L K + S NL+ M P+ + I+ Y V +A F
Sbjct: 222 TYNTLIDTLCKEGKVKESKNLLAVMTKKGVK-PDVVIYSILMDGYCLVGEVQKAKQIFLV 280
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGE-NKNVGFSGLVEMNKTKIYNMILR 150
+ + G+ +V SY +++ LC+ K V EA L +KN+ + T Y+ ++
Sbjct: 281 MVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNM-------IPDTVTYSSLID 333
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
G K+ + +EM RG +L +Y+ +D +CK+ KA+ L+ +MK++GI+
Sbjct: 334 GLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQP 393
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
+ Y +I + + +++ + G V T +I LC+ G EA A+
Sbjct: 394 NKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMK 453
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPRE---ILGLFDRMIESGIRP 312
++M GC+P+ +T+ R L + E L MI G+ P
Sbjct: 454 SKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 117/275 (42%), Gaps = 38/275 (13%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK------------ 192
+ IL KM + ++M+ +G+V DL + SI ++ C G+
Sbjct: 13 FGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKIL 72
Query: 193 -------------PWKAVKLYKEMKK----------KGIKMDVVAYNTVIRAVGVSEGVD 229
K + L E+KK +G +MD V+Y ++ +
Sbjct: 73 KLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETR 132
Query: 230 FAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH--- 286
A+++ R + + +P VV +T+I LC++ V EAY + +EM +G PDVITY
Sbjct: 133 CAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLI 192
Query: 287 CFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
C F + E GL + MI I P + TY L+ + G ++ + M + G
Sbjct: 193 CGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVK 252
Query: 347 PDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
PD Y+ L+D G + A++ M G++
Sbjct: 253 PDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVN 287
>gi|296088471|emb|CBI37462.3| unnamed protein product [Vitis vinifera]
Length = 673
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 116/221 (52%), Gaps = 6/221 (2%)
Query: 166 EEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD---VVAYNTVIRAV 222
EEM + G D +Y+ +D CK+G +A +L++ M+ KG M Y +I A+
Sbjct: 397 EEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMILAL 456
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
S+ + ++ ++M G P V T VI+ +C G+V EAY L EM KG PD+
Sbjct: 457 VQSDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRPDI 516
Query: 283 ITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
+TY+CF L +K E LGL+ RMIE+G P + T+ ML+ F G F W +
Sbjct: 517 VTYNCFLDVLCENKKSEEALGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETWHE 576
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
M++ GC+ D Y +++ L + ++ A +E+ KG+
Sbjct: 577 MDKRGCARDTDTYCVMIEGLFNCNKMEDACFLLDEVVNKGI 617
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 151/362 (41%), Gaps = 55/362 (15%)
Query: 12 KRALEFFNWV-ETDCHFTHTTDTYNSVIDILG----KFFEFDLSWNLIHRMKDN-PSSIP 65
K A FF W DC ++H YN +IDIL K +F + +++ MK N S+P
Sbjct: 281 KMAFRFFMWAGHQDC-YSHEPRAYNEMIDILSSTKYKVKQFRIVCDMLDYMKRNDKKSVP 339
Query: 66 NHATFRIMFKRYVTAHLV---------------------------------NEAMGTFNK 92
I+ ++Y HL + M +
Sbjct: 340 VEVLLMIL-RKYTEKHLAHLHKFAKKKKIRVKTQPEINALNLLLDALCKNPSRGMRVLEE 398
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELC-FGENKNVGFSGLVEMNKTKIYNMILR 150
+ E G D +Y +D+ C+ V EA EL F K S K Y +++
Sbjct: 399 MIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPT----AKTYAIMIL 454
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
+ +C + ++M GV+ D+ +Y ++ MC +GK +A K +EM KG +
Sbjct: 455 ALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRP 514
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
D+V YN + + ++ + A+ +Y M E GC PSV T N +I + E G A+
Sbjct: 515 DIVTYNCFLDVLCENKKSEEALGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETW 574
Query: 271 AEMPKKGCVPDVITY----HCFFRCLEKPREILGLFDRMIESGIR---PKMDTYVMLLRK 323
EM K+GC D TY F C K + L D ++ GI+ K D ++M L
Sbjct: 575 HEMDKRGCARDTDTYCVMIEGLFNC-NKMEDACFLLDEVVNKGIKLPYRKFDCFLMQLSM 633
Query: 324 FG 325
G
Sbjct: 634 IG 635
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 16/211 (7%)
Query: 6 CYANDWKRALEFFNWVET--DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
C A A E F ++ T + T TY +I L + + + LI M N
Sbjct: 419 CKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEECFKLIKDMI-NSGV 477
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK----DEVSYCNLVDALCEYKHVIE 119
+P+ +T++ + + A V EA + L+E G K D V+Y +D LCE K E
Sbjct: 478 LPDVSTYKQVIEGMCLAGKVEEA---YKFLEEMGNKGYRPDIVTYNCFLDVLCENKKSEE 534
Query: 120 AQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
A L +G G V +NM++ +F++ E W EMDKRG +D +
Sbjct: 535 ALGL-YGRMIEAGCVPSVH-----TFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDT 588
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
Y + ++ + K A L E+ KGIK+
Sbjct: 589 YCVMIEGLFNCNKMEDACFLLDEVVNKGIKL 619
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 185/417 (44%), Gaps = 59/417 (14%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVN-------- 84
+YN VI+ L K E D ++ L H M PN T+ + A ++
Sbjct: 141 SYNMVINGLFKEGEVDKAYTLFHEMLGQGFP-PNIVTYNSVIDGLCKAQAMDKAEAVLQQ 199
Query: 85 --------EAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC-----FGENKN 130
EA+ K+ GL+ D V+Y L+D C+ EA+ + G+N +
Sbjct: 200 MFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPD 259
Query: 131 V--------GFS---GLVEMN-------------KTKIYNMILRGWFKMSWWGKCREFWE 166
G++ LV+M+ + ++N+++R + K K +
Sbjct: 260 AYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFI 319
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
EM ++G ++ +Y+ +DI+CK+G+ AV + +M +G+ D++ + ++I +
Sbjct: 320 EMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIG 379
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
++ EM G P+ + NT++ LC+ GRV EA+ ++ G PDV++Y
Sbjct: 380 EWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYT 439
Query: 287 CFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
CL+ K E + L RM+ G+RP TY LL + + G + ++++M
Sbjct: 440 ILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSK 499
Query: 344 GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGT---KLVQGGL 397
P+ YN ++ L G + AR++ ++ G+ +LG +V GGL
Sbjct: 500 DVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGI------QLGINTYNIVLGGL 550
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 165/381 (43%), Gaps = 54/381 (14%)
Query: 50 SWNLIHRMKDNPSSIP-NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNL 107
S +H M D+ + P N ++ ++ V++A F+++ G V+Y ++
Sbjct: 121 SRAAVHMMADDGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSV 180
Query: 108 VDALCEYKHVIEAQELC---FGEN---------KNVGFSGLVEMNKTKIYNMILRGWFKM 155
+D LC+ + + +A+ + F + K + GL Y++++ + K+
Sbjct: 181 IDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGL--QPDVVTYSLLIDYYCKI 238
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
+ R ++ M +RG D ++Y + G L M + GI ++ +
Sbjct: 239 GRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVF 298
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
N +IRA +E +D AM + EMR+ G P+VVT TVI +LC+ GRV +A + ++M
Sbjct: 299 NILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVS 358
Query: 276 KGCVPDVITYHCFFRCL---------EK-----------PREIL---------------- 299
+G PD+IT+ L EK P I
Sbjct: 359 EGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLE 418
Query: 300 --GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
FD++I G++P + +Y +L+ + G + + +M +G PD Y+AL++
Sbjct: 419 AHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLN 478
Query: 358 ALIDKGMLDMARKYDEEMFAK 378
G +D A EMF+K
Sbjct: 479 GYCKNGRVDDALALYREMFSK 499
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 153/333 (45%), Gaps = 11/333 (3%)
Query: 52 NLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDA 110
+L+ M + + +H F I+ + Y +++AM F ++ + G + V+Y ++D
Sbjct: 281 DLLALMIQDGIPLEDH-VFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDI 339
Query: 111 LCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDK 170
LC+ V +A F + + G S + ++ G + W K + EM
Sbjct: 340 LCKAGRVEDAVS-HFSQMVSEGLS-----PDIITFTSLIHGLCTIGEWKKVEKLSFEMIN 393
Query: 171 RGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF 230
RG+ + + MD +CK G+ +A + ++ G+K DVV+Y +I + +D
Sbjct: 394 RGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDE 453
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR 290
++++ M +G +P VT + ++ C+NGRV +A A+ EM K P+ ITY+
Sbjct: 454 SIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILH 513
Query: 291 CLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
L ++ + ++++SGI+ ++TY ++L F+ +++ +
Sbjct: 514 GLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQL 573
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ +N ++ L+ G + A+ + GL
Sbjct: 574 EVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGL 606
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 141/324 (43%), Gaps = 44/324 (13%)
Query: 49 LSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNL 107
LS+ +I+R PN + V EA F+++ G+K D VSY L
Sbjct: 387 LSFEMINR-----GIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTIL 441
Query: 108 VDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEE 167
+D C + E+ +L G ++G L N T Y+ +L G+ K + E
Sbjct: 442 IDGYCLDGKMDESIKL-LGRMVSIG---LRPDNVT--YSALLNGYCKNGRVDDALALYRE 495
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M + V + +Y+I + + +G+ A + Y ++ GI++ + YN V+ + +
Sbjct: 496 MFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSF 555
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
VD A+R+++ +R Q V T N +I L + GR+ +A ++ + + G VPD I Y
Sbjct: 556 VDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIY-- 613
Query: 288 FFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
GL MI+S I G L ++ ME+ GC+
Sbjct: 614 ------------GL---MIQSHIEE---------------GLLEESDELFLSMEKNGCTA 643
Query: 348 DEFAYNALVDALIDKGMLDMARKY 371
+ NA+V L++KG + A Y
Sbjct: 644 NSRTLNAIVRKLLEKGDVRRAGTY 667
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 111/248 (44%), Gaps = 42/248 (16%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ ++ I+ Y ++E++ ++ GL+ D V+Y L++ C+ V +A L
Sbjct: 433 PDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALAL 492
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ E FS V+ N YN+IL G F REF+ ++ G+ +++Y+I
Sbjct: 493 -YREM----FSKDVKPNAIT-YNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIV 546
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA---VG----------------- 223
+ +C++ +A+++++ ++ K +++V +N +I VG
Sbjct: 547 LGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGL 606
Query: 224 VSEGVDFAMRV---------------YREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
V + + + + + + M + GC + T N +++ L E G VR A
Sbjct: 607 VPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGT 666
Query: 269 VLAEMPKK 276
L ++ +K
Sbjct: 667 YLTKIDEK 674
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 171/357 (47%), Gaps = 23/357 (6%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN +ID + K + +++L +M P+ T+ + + +N A+ FNK+
Sbjct: 204 YNMIIDNMCKAKLVNDAFDLYSQMVAK-RICPDVFTYNALISGFSAVSKLNYAIDLFNKM 262
Query: 94 DEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI------YN 146
+ + V N LVD C+ V +A+ + L M K I YN
Sbjct: 263 KKENINPNVYTFNILVDGFCKEGKVNDAKVV------------LAIMMKDDIKPDVVTYN 310
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++ G+ ++ K ++ ++ M GV+ ++ Y+ ++ CK +A+ L++EM+ +
Sbjct: 311 SLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCR 370
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
I +VV Y+++I + + +A+++ EM + G P++VT ++++ LC+N V +A
Sbjct: 371 KIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKA 430
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRK 323
A+L + +G PD+ TY + L + + +F+ ++ G + Y ++++
Sbjct: 431 IALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQG 490
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
F GF + KME+ GC P+ Y ++ +L +K D A K EM +GL
Sbjct: 491 FCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGL 547
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 165/371 (44%), Gaps = 21/371 (5%)
Query: 18 FNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRY 77
FN + + T T +N ++ L K + +L +M+ N + TF I+ +
Sbjct: 48 FNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIE-SDFFTFNILINCF 106
Query: 78 VTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNV--GFS 134
L + + F K+ + G +++ L+ LC H+ +A +K V GF
Sbjct: 107 SQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHF---HDKVVAQGF- 162
Query: 135 GLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPW 194
+++ Y ++ G K+ + + +D + V + Y++ +D MCK+
Sbjct: 163 ---HLDQVS-YGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVN 218
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
A LY +M K I DV YN +I +++A+ ++ +M++ P+V T N ++
Sbjct: 219 DAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILV 278
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIES 308
C+ G+V +A VLA M K PDV+TY +C + K ++I FD M
Sbjct: 279 DGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDI---FDSMASG 335
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G+ + Y ++ F + + ++++M P+ Y++L+D L G + A
Sbjct: 336 GVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYA 395
Query: 369 RKYDEEMFAKG 379
K +EM +G
Sbjct: 396 LKLVDEMHDRG 406
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 120/254 (47%), Gaps = 5/254 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+N+++ + ++ + ++ K+G +++ + +C G +A+ + ++
Sbjct: 99 FNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVV 158
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+G +D V+Y T+I + + A+++ + + QP+ V N +I +C+ V
Sbjct: 159 AQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVN 218
Query: 265 EAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLL 321
+A+ + ++M K PDV TY+ F + K + LF++M + I P + T+ +L+
Sbjct: 219 DAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILV 278
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
F + G + VV M + PD YN+L+D ++ A+ + M + G+
Sbjct: 279 DGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVI 338
Query: 382 AKPREELGTKLVQG 395
A ++ T +V G
Sbjct: 339 A--NVQIYTTMVNG 350
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 110/246 (44%), Gaps = 8/246 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS++D + + + ++ M I N + M + +V+EA+ F +
Sbjct: 308 TYNSLMDGYCSINKVNKAKDIFDSMASG-GVIANVQIYTTMVNGFCKIKMVDEAINLFEE 366
Query: 93 LD-EFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + + V+Y +L+D LC+ + A +L E + G + Y+ IL
Sbjct: 367 MRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLV-DEMHDRG-----QPPNIVTYSSILDA 420
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K K + +G+ D+++Y+I + +C+SG+ A +++++ KG +D
Sbjct: 421 LCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLD 480
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V AY +I+ D A+ + +M + GC P+ T VI L E A +L
Sbjct: 481 VYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLR 540
Query: 272 EMPKKG 277
EM +G
Sbjct: 541 EMIVRG 546
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 119/238 (50%), Gaps = 6/238 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G+ + R M V D ++Y+ + ++C G+ A+ L +M
Sbjct: 113 YNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDML 169
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
++G + +VV Y ++ A+ + G + AM V EMR GC P++VT N +I +C GRV
Sbjct: 170 RRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 229
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLL 321
+A +L + GC PD ++Y + L + ++ LF M+E P T+ ML+
Sbjct: 230 DARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLI 289
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R F R G + V ++M E C+ + N +++++ +G +D A K+ M + G
Sbjct: 290 RFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYG 347
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 159/368 (43%), Gaps = 44/368 (11%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV-DALCEYKHVIEAQE 122
+PN TF ++ + + +V A+ ++ E + CN+V +++C+ V +A
Sbjct: 279 MPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDA-- 336
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
F N+G G T Y +L+G + W +E +EM + + +++
Sbjct: 337 --FKFLNNMGSYGCNP--DTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNT 392
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR------ 236
++ I+C+ G +A+ L ++M++ G + VV YN ++ V +D A+ ++R
Sbjct: 393 FICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKP 452
Query: 237 --------------------------EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
EM C P+VVT N ++ C+ G + EA ++
Sbjct: 453 NTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELV 512
Query: 271 AEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
+M + GC P++ITY+ F + K + L L ++ G+ P + T+ ++ +
Sbjct: 513 EQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKE 572
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREE 387
+ ++ +++G P YN ++ L + +D A + M + G P E
Sbjct: 573 DRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNG--CMPNES 630
Query: 388 LGTKLVQG 395
L++G
Sbjct: 631 TYIILIEG 638
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 165/374 (44%), Gaps = 21/374 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
YN+++ ++ D + LI M P + R++ R A +A+ +
Sbjct: 112 AYNTLVAGYCRYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVA----DALSLLDD 167
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G + + V+Y L++A+C+ +A + E + G + YN+I+ G
Sbjct: 168 MLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAV-LDEMRAKGCTP-----NIVTYNVIING 221
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK-LYKEMKKKGIKM 210
+ R+ + G D SY+ + +C S K W V+ L+ EM +K
Sbjct: 222 MCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCAS-KRWDDVEELFAEMMEKNCMP 280
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
+ V ++ +IR V+ A++V ++M E C + CN VI +C+ GRV +A+ L
Sbjct: 281 NEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFL 340
Query: 271 AEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
M GC PD I+Y + L E+ + L M+ + P T+ + +
Sbjct: 341 NNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQK 400
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREE 387
G + ++ ++M+E GC+ YNALV+ +G +D A E+F + + KP
Sbjct: 401 GLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSAL----ELF-RSMPCKPNTI 455
Query: 388 LGTKLVQGGLDGEQ 401
T L+ G + E+
Sbjct: 456 TYTTLLTGLCNAER 469
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 106/225 (47%), Gaps = 14/225 (6%)
Query: 159 GKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTV 218
G R + G D++ + + +C+ G+ A ++ + + G +DV AYNT+
Sbjct: 57 GAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTL 116
Query: 219 IRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGC 278
+ +D A R+ + M P T +I++LC+ GRV +A ++L +M ++GC
Sbjct: 117 VAGYCRYGHLDAARRL---IGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGC 173
Query: 279 VPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFV 335
P+V+TY + K + + + D M G P + TY +++ R G +
Sbjct: 174 QPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARD 233
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD--EEMFAK 378
+ ++ GC PD +Y L+ L ++++D EE+FA+
Sbjct: 234 LLNRLFSYGCQPDTVSYTTLLKGLC------ASKRWDDVEELFAE 272
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 120/282 (42%), Gaps = 28/282 (9%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T +Y +V+ L + ++ + L+ M N + PN TF L+ +A+
Sbjct: 352 TISYTTVLKGLCRAERWNDAKELLKEMVRN-NCPPNEVTFNTFICILCQKGLIEQAIMLI 410
Query: 91 NKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL--------------------CFGENK 129
++ E G V+Y LV+ C H+ A EL C E
Sbjct: 411 EQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERL 470
Query: 130 NVGFSGLVEM------NKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ + EM +N+++ + + + + E E+M + G +L +Y+
Sbjct: 471 DAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTL 530
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
D + K A++L + KG+ DV+ ++++I + + V+ A++++ +++G
Sbjct: 531 FDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGM 590
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
+P + N ++ LC+ + A LA M GC+P+ TY
Sbjct: 591 RPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTY 632
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 73/189 (38%), Gaps = 37/189 (19%)
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------HCFFRCLEKP 295
G P V C +I+ LC GR +A VL G DV Y +C + L+
Sbjct: 70 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 129
Query: 296 REILG-----------------------------LFDRMIESGIRPKMDTYVMLLRKFGR 326
R ++G L D M+ G +P + TY +LL +
Sbjct: 130 RRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCK 189
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPRE 386
V +M GC+P+ YN +++ + +G +D AR +F+ G +P
Sbjct: 190 NSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYG--CQPDT 247
Query: 387 ELGTKLVQG 395
T L++G
Sbjct: 248 VSYTTLLKG 256
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/304 (19%), Positives = 118/304 (38%), Gaps = 35/304 (11%)
Query: 6 CYANDWKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C A W A E V +C T +N+ I IL + + + LI +M+++ ++
Sbjct: 363 CRAERWNDAKELLKEMVRNNCPPNEVT--FNTFICILCQKGLIEQAIMLIEQMQEHGCTV 420
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELC 124
T+ + + ++ A+ F + + ++Y L+ LC + + A EL
Sbjct: 421 -GVVTYNALVNGFCVQGHIDSALELFRSMP--CKPNTITYTTLLTGLCNAERLDAAAELV 477
Query: 125 F------GENKNVGFSGLVEMNKTK-----------------------IYNMILRGWFKM 155
V F+ LV K YN + G K
Sbjct: 478 AEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKD 537
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
E + +GV D+ ++S + I+ K + +A++++ + G++ + Y
Sbjct: 538 CSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVY 597
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
N ++ + +D A+ M GC P+ T +I+ L G ++EA +L+ +
Sbjct: 598 NKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCS 657
Query: 276 KGCV 279
+G V
Sbjct: 658 RGVV 661
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 172/403 (42%), Gaps = 41/403 (10%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+ +D ALE+F + F HT TY +I+ L E D L+ +MK S +
Sbjct: 52 HEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISC-S 110
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCF 125
F + Y A +A+ TF ++ +F +K V Y +++DAL + ++ + +
Sbjct: 111 EDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLD-ENRFQMINPIY 169
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
K G V YN++L+ K + + EM +G D SY+ +
Sbjct: 170 SNMKKDGMEPNV-----FTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLIS 224
Query: 186 IMCKSGK------------PW------------------KAVKLYKEMKKKGIKMDVVAY 215
+CK GK P +A +L EM KGI +V++Y
Sbjct: 225 SLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISY 284
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
T+I A+ + V+ ++ V +M GC P++ T ++IK G EA M +
Sbjct: 285 TTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIR 344
Query: 276 KGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
+G VP+V+ Y+ L R + + +F++M +G P + TY L+ + + G L
Sbjct: 345 EGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDG 404
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
VW M GC P+ AY +VD L M + A E M
Sbjct: 405 ASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENM 447
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 166/380 (43%), Gaps = 25/380 (6%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A ++AL+ F ++ D T YN ++D L F + + MK + PN
Sbjct: 124 AGSSEQALKTFYRMQ-DFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGME-PNV 181
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFG 126
T+ I+ K + V+ A ++ G DEVSY L+ +LC+ V EA+EL
Sbjct: 182 FTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMS 241
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
+V +YN ++ G K + + + +EM +G+ ++ SY+ ++
Sbjct: 242 FTPSV-----------PVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINA 290
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV----GVSEGVDFAMRVYREMREMG 242
+ +G ++ + +M +G ++ + ++I+ G E +DF R+ RE G
Sbjct: 291 LSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIRE----G 346
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG-- 300
P+VV N ++ LC + +A +V +M GC P+V TY K ++ G
Sbjct: 347 VVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGAS 406
Query: 301 -LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+++ MI G P + Y ++ R + + + M+ C P+ +N + L
Sbjct: 407 EVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGL 466
Query: 360 IDKGMLDMARKYDEEMFAKG 379
G +D A K ++M G
Sbjct: 467 CGSGRVDWAIKVFDQMGNSG 486
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 166/357 (46%), Gaps = 19/357 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+Y ++I+ L +LS ++ +M S PN TF + K + +EA+ +++
Sbjct: 283 SYTTIINALSDAGNVELSLAVLAKMFARGCS-PNLHTFTSLIKGFFLKGGSHEALDFWDR 341
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN----KTKIYNM 147
+ G+ + V+Y L+ LC + + +A V +E+N + Y+
Sbjct: 342 MIREGVVPNVVAYNALMHGLCSKRSLGDA----------VSVFNQMEINGCCPNVRTYSA 391
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++ G+ K E W M G ++ +Y+ +D++C++ +A L + M+ +
Sbjct: 392 LIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVEN 451
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ V +NT I+ + S VD+A++V+ +M GC P+ T N ++ L ++ R EA+
Sbjct: 452 CPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAF 511
Query: 268 AVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
++ +M +G +++TY+ + C E L L +M+ G +P T +++ +
Sbjct: 512 GLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAY 571
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ G + + ++ PD AY +L+ + ++ A Y M ++G+S
Sbjct: 572 CKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGIS 628
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 137/309 (44%), Gaps = 35/309 (11%)
Query: 89 TFNKLDEFGLK----DEVSYCNLVDALCEYKHV-----IEAQELCFGENKNVGFSGLVEM 139
F LDE K + +SY +++AL + +V + A+ G + N+
Sbjct: 265 AFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNL-------- 316
Query: 140 NKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKL 199
+ +++G+F + +FW+ M + GVV ++ +Y+ M +C AV +
Sbjct: 317 ---HTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSV 373
Query: 200 YKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCE 259
+ +M+ G +V Y+ +I + +D A V+ M GC P+VV ++ +LC
Sbjct: 374 FNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCR 433
Query: 260 NGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDT 316
N +AY ++ M + C P+ +T++ F + L + + +FD+M SG P T
Sbjct: 434 NSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTT 493
Query: 317 YVMLL------RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
Y LL R+FG F + K ME G + YN ++ GML A +
Sbjct: 494 YNELLDSLLKDRRFGE------AFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALE 547
Query: 371 YDEEMFAKG 379
+M +G
Sbjct: 548 LLGKMVVRG 556
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 151/360 (41%), Gaps = 21/360 (5%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
FT + YN++I+ + K + F+ ++ L+ M N PN ++ + A V +
Sbjct: 242 FTPSVPVYNALINGVCKEYTFEEAFQLLDEMM-NKGIDPNVISYTTIINALSDAGNVELS 300
Query: 87 MGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGF------SGLVEMN 140
+ K+ G L + +I+ L G ++ + F G+V
Sbjct: 301 LAVLAKMFARGCSPN---------LHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVP-- 349
Query: 141 KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
YN ++ G G + +M+ G ++ +YS +D K+G A +++
Sbjct: 350 NVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVW 409
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
M G +VVAY ++ + + + A + M+ C P+ VT NT IK LC +
Sbjct: 410 NWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGS 469
Query: 261 GRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTY 317
GRV A V +M GC P+ TY+ L K R E GL M GI + TY
Sbjct: 470 GRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTY 529
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
++ + G L + KM G PD N ++DA +G +++A + + + A
Sbjct: 530 NTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSA 589
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 4/207 (1%)
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
++G +A+K + M+ +K V YN ++ A+ +Y M++ G +P+V
Sbjct: 123 RAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVF 182
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIES 308
T N ++K LC+N RV A+ +L EM KGC PD ++Y L K ++ R +
Sbjct: 183 TYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKE--ARELAM 240
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
P + Y L+ + F + +M G P+ +Y +++AL D G ++++
Sbjct: 241 SFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELS 300
Query: 369 RKYDEEMFAKGLSAKPREELGTKLVQG 395
+MFA+G S P T L++G
Sbjct: 301 LAVLAKMFARGCS--PNLHTFTSLIKG 325
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 9/222 (4%)
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
+ F+ D R V + Y+ +D + + +Y MKK G++ +V YN +++A
Sbjct: 132 KTFYRMQDFR-VKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKA 190
Query: 222 VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
+ + VD A ++ EM GC P V+ T+I LC+ G+V+EA + P
Sbjct: 191 LCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSF-----TPS 245
Query: 282 VITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWK 338
V Y+ + K E L D M+ GI P + +Y ++ G + V
Sbjct: 246 VPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLA 305
Query: 339 KMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
KM GCSP+ + +L+ KG A + + M +G+
Sbjct: 306 KMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGV 347
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 128/297 (43%), Gaps = 23/297 (7%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PN T+ + Y A ++ A +N + G + V+Y +VD LC ++ + Q
Sbjct: 384 PNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLC--RNSMFNQAY 441
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
C EN V T +N ++G + +++M G + +Y+
Sbjct: 442 CLIENMQVENCP----PNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNEL 497
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D + K + +A L K+M+ +GI++++V YNT+I + + A+ + +M G
Sbjct: 498 LDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGT 557
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILG 300
+P +T N VI C+ G+V A ++ + PD+I Y C E +
Sbjct: 558 KPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIV 617
Query: 301 LFDRMIESGIRPKMDTYVMLLRK-FGRWG------------FLRPVFVVWKKMEELG 344
RM+ GI P + T+ +L+R F G ++P FVV +E G
Sbjct: 618 YLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDASSIMQPKFVVLIITKEAG 674
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 139/353 (39%), Gaps = 60/353 (16%)
Query: 8 ANDWKRALEFFNWVETD-CHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
A D A E +NW+ T CH Y ++D+L + F+ ++ LI M+ + PN
Sbjct: 399 AGDLDGASEVWNWMITHGCH--PNVVAYTCMVDVLCRNSMFNQAYCLIENMQVE-NCPPN 455
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFG 126
TF K + V+ A+ F+++ G CF
Sbjct: 456 TVTFNTFIKGLCGSGRVDWAIKVFDQMGNSG--------------------------CFP 489
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
T YN +L K +G+ ++M+ RG+ +L +Y+ +
Sbjct: 490 --------------NTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYG 535
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
C +G +A++L +M +G K D + N VI A V+ A+++ + P
Sbjct: 536 YCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPD 595
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMI 306
++ ++I +C + V EA L M +G P+V T++ R LF M
Sbjct: 596 IIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVR---------HLFSNMG 646
Query: 307 ESGIRPKMDT-------YVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
SG +D +V+L+ G L V + +E C+ ++F +
Sbjct: 647 HSGAVQFLDASSIMQPKFVVLIITKEAGGQLHSVSSMGSPVERAICAKNQFLF 699
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 153/336 (45%), Gaps = 18/336 (5%)
Query: 35 NSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL- 93
NS++ L + F+ L+ +M + PN TF I+ V++A+ K+
Sbjct: 309 NSLLTGLAREGNFNRMNELMEKMVEMDIQ-PNVVTFGILINHMCKFRRVDDALEVLEKMS 367
Query: 94 ---DEFGLK-----DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
+ G+ D V Y L+D LC+ E L G + T Y
Sbjct: 368 GGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAP-----DTITY 422
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N ++ G+ K K +E ++EM+K GV ++ + + + MC++G+ AV + E ++
Sbjct: 423 NCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQR 482
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+G+K D V Y +I A + AM ++ EM + GC P + T+I + GR+ +
Sbjct: 483 RGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMAD 542
Query: 266 AYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLR 322
A VLAE+ K G PD + Y+ F K + + M E+G++P TY L+
Sbjct: 543 ASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIA 602
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+ G L+ V +KM + G P Y A+++A
Sbjct: 603 YASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINA 638
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 141/308 (45%), Gaps = 16/308 (5%)
Query: 88 GTFNKLDEFGLK--------DEVSYCNLVDALCEYKHVIEAQELC---FGENKNVGFSGL 136
G FN+++E K + V++ L++ +C+++ V +A E+ G ++ G S
Sbjct: 319 GNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVS 378
Query: 137 VEMNKTKIYNMILRGWFKMSWWGKCREFWEEM-DKRGVVKDLHSYSIYMDIMCKSGKPWK 195
VE + IYN ++ G K+ + E M ++G D +Y+ +D CK+G+ K
Sbjct: 379 VEPDVV-IYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEK 437
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
+L+ EM K+G+ +VV NT++ + + V A+ + E + G + VT +I
Sbjct: 438 GKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALIN 497
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRP 312
C +A + EM K GC PD I Y+ + + + + + GIRP
Sbjct: 498 AFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRP 557
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
Y L+ F R VF + K+MEE G PD YN L+ G L A+K
Sbjct: 558 DTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVM 617
Query: 373 EEMFAKGL 380
+M G+
Sbjct: 618 RKMIKAGV 625
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 146/346 (42%), Gaps = 12/346 (3%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T TYN +ID K E + L M + PN T + V+ A+ F
Sbjct: 419 TITYNCLIDGFCKAGEIEKGKELFDEM-NKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFF 477
Query: 91 NKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+ G+K D V+Y L++A C + +A EL F E G S +Y ++
Sbjct: 478 VEAQRRGMKGDAVTYTALINAFCNVNNFEKAMEL-FNEMLKSGCSP-----DAIVYYTLI 531
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G+ + E+ K G+ D Y+ + C++ K + ++ KEM++ G+K
Sbjct: 532 SGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLK 591
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
D + YNT+I + + FA +V R+M + G P+V T VI C NG EA +
Sbjct: 592 PDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEI 651
Query: 270 LAEMPKKGCV-PDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+M V P+ + Y+ L K + + L + M G+ P TY + +
Sbjct: 652 FKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLR 711
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
L VF +M E C+PD L + L G ++ +K+
Sbjct: 712 DEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKF 757
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 150/348 (43%), Gaps = 11/348 (3%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN++ID L K L+ RM+ P+ T+ + + A + + F+++
Sbjct: 386 YNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEM 445
Query: 94 DEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
++ G+ V N LV +C V A F E + G G Y ++ +
Sbjct: 446 NKEGVAPNVVTVNTLVGGMCRTGRVSSAVNF-FVEAQRRGMKG-----DAVTYTALINAF 499
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
++ + K E + EM K G D Y + ++G+ A + E+KK GI+ D
Sbjct: 500 CNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDT 559
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V YNT+I + + +EM E G +P +T NT+I +NG ++ A V+ +
Sbjct: 560 VCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRK 619
Query: 273 MPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRM-IESGIRPKMDTYVMLLRKFGRWG 328
M K G VP V TY CL E + +F M S + P Y +L+ +
Sbjct: 620 MIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNN 679
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
++ + + M+ G +P+ YNA+ L D+ L+ ++ + M
Sbjct: 680 KVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMI 727
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 95/242 (39%), Gaps = 47/242 (19%)
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+C++ K + L+ EM K G ++ A N+++ + + + +M EM QP+
Sbjct: 280 LCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPN 339
Query: 247 VVT--------C-----------------------------------NTVIKLLCENGRV 263
VVT C NT+I LC+ GR
Sbjct: 340 VVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQ 399
Query: 264 REAYAVLAEM-PKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVM 319
+E ++ M +KGC PD ITY+C K EI LFD M + G+ P + T
Sbjct: 400 QEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNT 459
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L+ R G + + + + G D Y AL++A + + A + EM G
Sbjct: 460 LVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSG 519
Query: 380 LS 381
S
Sbjct: 520 CS 521
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 115/296 (38%), Gaps = 47/296 (15%)
Query: 6 CYANDWKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C N++++A+E FN +++ C
Sbjct: 500 CNVNNFEKAMELFNEMLKSGCS-------------------------------------- 521
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ + + + A + +A +L + G++ D V Y L+ C E+
Sbjct: 522 PDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEM 581
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
K + +GL T YN ++ K ++ +M K GVV + +Y
Sbjct: 582 L----KEMEEAGLKP--DTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAV 635
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKG-IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ C +G +A++++K+MK + + V YN +I ++ + V A+ + +M+ G
Sbjct: 636 INAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWG 695
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI 298
P+ T N + K L + + + + + M + C PD IT L EI
Sbjct: 696 VTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEI 751
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 95/234 (40%), Gaps = 50/234 (21%)
Query: 174 VKDLHSYS---IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF 230
+ L SY+ I+ C+ +LYK K+ I + V A + ++RA G SE V+
Sbjct: 116 TQSLLSYTFQAIFELAFCEPDSNANLSRLYKTSKELNIPLTVNAASFLLRASGRSELVEE 175
Query: 231 AMRVYREMREMGCQPSVVTC---NTVIKLLCENGRVREAYAVLAEM----PKKGCVPDVI 283
++ ++ ++ PSV N + +L +GRV++A V+ EM C P+
Sbjct: 176 SLILFNDL-----DPSVKNTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDA 230
Query: 284 TYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF------ 334
T F L E+ E+L D V L+ KFG G L F
Sbjct: 231 TGDILFSFLLKRERNEELLS-------------EDEIVNLVLKFGEHGVLISSFWMGRLI 277
Query: 335 -------------VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
++ +M +LG + A N+L+ L +G + + E+M
Sbjct: 278 TRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKM 331
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 146/309 (47%), Gaps = 26/309 (8%)
Query: 82 LVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN 140
L EA F+++ G + D+V++ +L+D + + E G K + +G
Sbjct: 270 LHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARK----HEEAIGVLKRMENAGCTPSV 325
Query: 141 KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
T YN ++ + K + E +EM+ RG+ D+ +Y+ + + + GK A+ Y
Sbjct: 326 VT--YNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATY 383
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
EM + G ++ YN +I+ GV M V+ ++R G P VVT NT++ + +N
Sbjct: 384 SEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQN 443
Query: 261 GRVREAYAVLAEMPKKGCVPDVITY----HCFFRCLEKPREILGLFD-------RMIESG 309
G E V EM K G +P+ TY + RC GLFD RMIE+G
Sbjct: 444 GLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRC--------GLFDQAMEIYKRMIEAG 495
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
I P + TY +L R G ++ +M + C PDE +Y++L+ A + LD +
Sbjct: 496 IYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMK 555
Query: 370 KYDEEMFAK 378
E+++A+
Sbjct: 556 TLSEDIYAE 564
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 110/224 (49%), Gaps = 4/224 (1%)
Query: 145 YNMILRGWFKMSW-WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
YN++ + KMS W + + M + G+ +D ++Y+ + + G +A +++ EM
Sbjct: 222 YNVVFHAYSKMSVPWKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEM 281
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
K G + D V +N+++ G + + A+ V + M GC PSVVT N++I ++G +
Sbjct: 282 KAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLL 341
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVML 320
EA + EM +G PDV+TY L++ +I L + M+ +G P + TY L
Sbjct: 342 EEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNAL 401
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
++ G G + V+ + G PD +N L+ G+
Sbjct: 402 IKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGL 445
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 99/219 (45%), Gaps = 10/219 (4%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK-AVKLYKEM 203
Y ++ + + + ++ M GV L +Y++ K PWK V L M
Sbjct: 187 YTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVVALVDSM 246
Query: 204 KKKGIKMDVVAYNTVI---RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
K+ GI+ D YNT+I R G+ A +V+ EM+ G +P VT N+++ + +
Sbjct: 247 KEDGIERDRYTYNTLISCCRRRGLHRE---AAQVFDEMKAAGFEPDKVTFNSLLDVYGKA 303
Query: 261 GRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTY 317
+ EA VL M GC P V+TY+ K E L L M G++P + TY
Sbjct: 304 RKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTY 363
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
L+ R G + + +M GCSP+ YNAL+
Sbjct: 364 TTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALI 402
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 4/210 (1%)
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG-VSEGVDFAMRV 234
D +Y+ + ++G+ AV +++ M G++ +V YN V A +S + +
Sbjct: 183 DASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVVAL 242
Query: 235 YREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
M+E G + T NT+I G REA V EM G PD +T++ K
Sbjct: 243 VDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGK 302
Query: 295 PR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFA 351
R E +G+ RM +G P + TY L+ + + G L + ++ME G PD
Sbjct: 303 ARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVT 362
Query: 352 YNALVDALIDKGMLDMARKYDEEMFAKGLS 381
Y L+ L G +D A EM G S
Sbjct: 363 YTTLISGLDRVGKIDAALATYSEMVRNGCS 392
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/405 (20%), Positives = 165/405 (40%), Gaps = 54/405 (13%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY ++I L + + D + M N S PN T+ + K + E M F+
Sbjct: 362 TYTTLISGLDRVGKIDAALATYSEMVRNGCS-PNLCTYNALIKLHGVRGKFTEMMAVFDD 420
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
L G + D V++ L+ + E + F E K G+ + + Y ++
Sbjct: 421 LRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGV-FKEMKKAGY-----IPERDTYVSLISS 474
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + + + E ++ M + G+ D+ +Y+ + + + G+ +A KL+ EM + K D
Sbjct: 475 YSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPD 534
Query: 212 VVAYNTVIRAVGVSEGVD---------FAMRV--------------------------YR 236
++Y++++ A ++ +D +A R+ ++
Sbjct: 535 ELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQ 594
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY----HCFFRC- 291
E+R C + N ++ + +N V++ VL+ M + TY H + R
Sbjct: 595 ELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLG 654
Query: 292 -LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF 350
EK IL + SG+RP +Y ++ +GR G ++ ++ +M+ G PD
Sbjct: 655 DCEKCESIL---TEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIV 711
Query: 351 AYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
YN + + + M + A + +G +P E ++QG
Sbjct: 712 TYNIFIKSYVANIMFEEAIDLVRYLVTQG--CRPNERTFNSILQG 754
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/424 (20%), Positives = 173/424 (40%), Gaps = 85/424 (20%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+NS++D+ GK + + + ++ RM +N P+ T+ + YV L+ EA+ +
Sbjct: 292 TFNSLLDVYGKARKHEEAIGVLKRM-ENAGCTPSVVTYNSLISAYVKDGLLEEALELKQE 350
Query: 93 LDEFGLK-DEVSYCNLVDAL-------------------------CEYKHVIEAQEL--- 123
++ G+K D V+Y L+ L C Y +I+ +
Sbjct: 351 MEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGK 410
Query: 124 ------CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
F + ++ G+ + +N +L + + + ++EM K G + +
Sbjct: 411 FTEMMAVFDDLRSAGY-----VPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPER 465
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
+Y + + G +A+++YK M + GI D+ YN V+ A+ + A +++ E
Sbjct: 466 DTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAE 525
Query: 238 MREMGCQPSVVTCNTVI------------KLLCE--------------------NGRVR- 264
M + C+P ++ ++++ K L E N +V
Sbjct: 526 MVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNNKVNN 585
Query: 265 --EAYAVLAEMPKKGCVPDV------ITYHCFFRCLEKPREILGLFDRMIESGIRPKMDT 316
E E+ ++ C D+ ++ + + ++K E+L L M+E+ I T
Sbjct: 586 LPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSL---MMENSINHSAAT 642
Query: 317 YVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
Y L+ + R G + +++ G PD ++YN ++ A KG + A + EM
Sbjct: 643 YNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMK 702
Query: 377 AKGL 380
G+
Sbjct: 703 CSGV 706
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 86/168 (51%), Gaps = 8/168 (4%)
Query: 116 HVIEAQELCFGENKNVG-----FSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEE 167
+V+ A +G+NK V S ++E + YN ++ + ++ KC E
Sbjct: 606 NVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTE 665
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
+ G+ D +SY+ + + G+ +A +L+ EMK G+K D+V YN I++ +
Sbjct: 666 IKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANIM 725
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
+ A+ + R + GC+P+ T N++++ +GR+ EA + L+ +PK
Sbjct: 726 FEEAIDLVRYLVTQGCRPNERTFNSILQGYSRHGRMVEAKSFLSNLPK 773
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 71/195 (36%), Gaps = 41/195 (21%)
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK----- 294
E P ++ GR R+A AV M G P ++TY+ F K
Sbjct: 177 EAAPAPDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPW 236
Query: 295 ----------------------------------PREILGLFDRMIESGIRPKMDTYVML 320
RE +FD M +G P T+ L
Sbjct: 237 KEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSL 296
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
L +G+ V K+ME GC+P YN+L+ A + G+L+ A + +EM +G+
Sbjct: 297 LDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGM 356
Query: 381 SAKPREELGTKLVQG 395
KP T L+ G
Sbjct: 357 --KPDVVTYTTLISG 369
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 133/301 (44%), Gaps = 11/301 (3%)
Query: 32 DTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
DTY S+I + FD + + RM + P+ +T+ + +A F
Sbjct: 466 DTYVSLISSYSRCGLFDQAMEIYKRMIE-AGIYPDISTYNAVLSALARGGRWEQAEKLFA 524
Query: 92 KLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
++ + K DE+SY +L+ A K + + + L ++++ ++ +E + + ++L
Sbjct: 525 EMVDRDCKPDELSYSSLLHAYANAKKLDKMKTL----SEDI-YAERIERHNWLVKTLVLV 579
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
K++ + + ++E+ +R D++ + + I K+ K ++ M + I
Sbjct: 580 NN-KVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINH 638
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
YN+++ + + E++ G +P + NTVI G+++EA +
Sbjct: 639 SAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLF 698
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
+EM G PD++TY+ F + E + L ++ G RP T+ +L+ + R
Sbjct: 699 SEMKCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYSRH 758
Query: 328 G 328
G
Sbjct: 759 G 759
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 81/416 (19%), Positives = 157/416 (37%), Gaps = 74/416 (17%)
Query: 33 TYNSVID---ILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
TYN++I + GKF E ++ + + +P+ T+ + + L +E G
Sbjct: 397 TYNALIKLHGVRGKFTEMMAVFDDLR----SAGYVPDVVTWNTLLSVFGQNGLDSEVSGV 452
Query: 90 FNKLDEFG----------LKDEVSYCNLVDALCE-YKHVIEAQELCFGENKNVGFSGLVE 138
F ++ + G L S C L D E YK +IEA G+
Sbjct: 453 FKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEA--------------GIYP 498
Query: 139 MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD-------LHSYS---------- 181
T YN +L + W + + + EM R D LH+Y+
Sbjct: 499 DIST--YNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKT 556
Query: 182 ----IYMD--------------IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
IY + + K + K ++E++++ +D+ N ++ G
Sbjct: 557 LSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYG 616
Query: 224 VSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVI 283
++ V V M E S T N+++ + G + ++L E+ G PD
Sbjct: 617 KNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRY 676
Query: 284 TYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
+Y+ + +E LF M SG++P + TY + ++ + + + +
Sbjct: 677 SYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYL 736
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM--FAKGLSAKPREELGTKLVQ 394
GC P+E +N+++ G + A+ + + G+S + ++ L L +
Sbjct: 737 VTQGCRPNERTFNSILQGYSRHGRMVEAKSFLSNLPKIYPGISKQEKQRLSELLAK 792
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 171/388 (44%), Gaps = 51/388 (13%)
Query: 33 TYNSVIDIL----GKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
+YN+V+ L G S + + +P++ PN ++ + + + EA+
Sbjct: 85 SYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGEAVA 144
Query: 89 TFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
+ G++ D V+Y L+ LC+ + A EL E G V+ N +Y+
Sbjct: 145 LLRSMQASGVRADVVTYGTLIRGLCDASELDAALEL-LDEMCGSG----VQPNVV-VYSC 198
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK--------- 198
+LRG+ + W + +E+M +RG+ D+ ++ +D +CK GK KA K
Sbjct: 199 LLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRG 258
Query: 199 --------------------------LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM 232
L KEM KG+ DVV YNT+I + +D AM
Sbjct: 259 LEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAM 318
Query: 233 RVYREM--REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF-- 288
EM + +P VVT N+VI LC+ GR+ +A V M ++GC+ +++TY+
Sbjct: 319 SFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIG 378
Query: 289 -FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
F + K + + L D + SG+ P TY +L+ F + + M + G
Sbjct: 379 GFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKA 438
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEM 375
+ F Y L+ A+ +GM++ A EM
Sbjct: 439 ELFHYIPLLAAMCQQGMMERAMGLFNEM 466
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 142/317 (44%), Gaps = 45/317 (14%)
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEY--KHVIEAQELCFGENKN 130
+ R + V EA + L + ++D VSY ++ ALC H+ +A+ L
Sbjct: 57 LLNRRLRGAPVTEACSLLSALPD--VRDAVSYNTVLAALCRRGGDHLRQARSL------- 107
Query: 131 VGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS 190
LV+M+ RE V SY+ M +C S
Sbjct: 108 -----LVDMS---------------------REAHPAARPNAV-----SYTTVMRGLCAS 136
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTC 250
+ +AV L + M+ G++ DVV Y T+IR + + +D A+ + EM G QP+VV
Sbjct: 137 RRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVY 196
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIE 307
+ +++ C +GR ++ V +M ++G PDVI + C E K + + D M++
Sbjct: 197 SCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQ 256
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
G+ P + TY +L+ + G +R + K+M++ G +PD YN L+ L +D
Sbjct: 257 RGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDE 316
Query: 368 ARKYDEEMFAKGLSAKP 384
A + EEM +P
Sbjct: 317 AMSFLEEMIQGDTVVEP 333
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 140/325 (43%), Gaps = 9/325 (2%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PN T+ ++ V EA+ ++D+ G+ D V+Y L+ L + EA +
Sbjct: 261 PNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEA--M 318
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F E G + +VE + +N ++ G K+ + + E M +RG + +L +Y+
Sbjct: 319 SFLEEMIQGDT-VVEPDVVT-FNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYL 376
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ + K A+ L E+ G++ D Y+ +I VD A + MR+ G
Sbjct: 377 IGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGI 436
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILG 300
+ + ++ +C+ G + A + EM K C D I Y K + +
Sbjct: 437 KAELFHYIPLLAAMCQQGMMERAMGLFNEM-DKNCGLDAIAYSTMIHGACKSGDMKTVKQ 495
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L M++ G+ P TY ML+ + + G L V K+M G PD +++L+
Sbjct: 496 LIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYS 555
Query: 361 DKGMLDMARKYDEEMFAKGLSAKPR 385
+G D K EM AK ++ P+
Sbjct: 556 AEGQTDKVLKLIHEMRAKNVAFDPK 580
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 102/227 (44%), Gaps = 13/227 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN +I + + ++ NL+ + + P+ T+ I+ + V+ A
Sbjct: 372 TYNYLIGGFLRVHKVKMAMNLMDELAISGLE-PDSFTYSILINGFSKMWEVDRAEKFLCT 430
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + G+K E+ Y L+ A+C+ + A L +KN G + Y+ ++ G
Sbjct: 431 MRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGLDAIA-------YSTMIHG 483
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K ++ ++M G+ D +YS+ +++ K G +A ++ K+M G D
Sbjct: 484 ACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPD 543
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMR--EMGCQPSVVTCNTVIKL 256
V ++++I+ D +++ EMR + P +++ T+I+L
Sbjct: 544 VAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIIS--TIIRL 588
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 175/393 (44%), Gaps = 28/393 (7%)
Query: 6 CYANDWKRALEFFNWV-ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C + AL+FF+ + ET C T+ ++++ L + + L+ RM ++
Sbjct: 160 CVEDRVSEALDFFHQMFETTCR--PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQ- 216
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG--LKDEVSYCNLVDALCEYKHVIEAQE 122
P T+ + A+ K++E + + V Y ++D+LC+ +AQ
Sbjct: 217 PTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQN 276
Query: 123 LCFGENKNVG-FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
L F E + G F L YN ++ G+ W + +EM +R + D+ +Y+
Sbjct: 277 L-FTEMQEKGIFPDLF------TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
++ K GK ++A +LY EM +GI + + Y+++I +D A ++ M
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREI 298
GC P+++T NT+I C R+ + +L EM + G V D TY+ F +
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL-----------GCSP 347
L L MI SG+ P + T LL G L+ ++K M++ G P
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
D YN L+ LI++G A + EEM +G+
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 168/387 (43%), Gaps = 35/387 (9%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TY +++D + K + + NL+ +M++ IPN + + ++A
Sbjct: 218 TQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Query: 90 FNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI---- 144
F ++ E G+ D +Y +++ C +A++L L EM + KI
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL------------LQEMLERKISPDV 325
Query: 145 --YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
YN ++ + K + + E ++EM RG++ + +YS +D CK + A ++
Sbjct: 326 VTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYL 385
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M KG +++ +NT+I ++ +D M + EM E G T NT+I G
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIES----------- 308
+ A +L EM G PD++T L K ++ L +F M +S
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G+ P + TY +L+ G ++++M G PD Y++++D L + LD A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 369 RKYDEEMFAKGLSAKPREELGTKLVQG 395
+ + M +K S P T L+ G
Sbjct: 566 TQMFDSMGSKSFS--PNVVTFTTLING 590
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 141/322 (43%), Gaps = 17/322 (5%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGE 127
+F I+ K + + + A+ TF K+ + GL D V++ L+ LC V EA +
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDF---- 171
Query: 128 NKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F + E + ++ G + + + M + G+ +Y +
Sbjct: 172 -----FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226
Query: 185 DIMCKSGKPWKAVKLYKEMKK-KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
D MCK G A+ L ++M++ I +VV Y+ +I ++ A ++ EM+E G
Sbjct: 227 DGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILG 300
P + T N++I C +GR +A +L EM ++ PDV+TY+ K E
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEE 346
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L+D M+ GI P TY ++ F + L ++ M GCSP+ +N L+D
Sbjct: 347 LYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406
Query: 361 DKGMLDMARKYDEEMFAKGLSA 382
+D + EM GL A
Sbjct: 407 GAKRIDDGMELLHEMTETGLVA 428
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 154/347 (44%), Gaps = 32/347 (9%)
Query: 33 TYNSVIDIL---GKFFEFDLSWN-LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
TYN++I+ GKFFE + ++ ++ R IPN T+ M + + ++ A
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPR-----GIIPNTITYSSMIDGFCKQNRLDAAEH 381
Query: 89 TFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
F + G +++ L+D C K + + EL + +GLV T YN
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTE----TGLVA--DTTTYNT 435
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK- 206
++ G++ + + +EM G+ D+ + +D +C +GK A++++K M+K
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495
Query: 207 ----------GIKMDVVAYNTVIRAVGVSEGVDF-AMRVYREMREMGCQPSVVTCNTVIK 255
G++ DV YN +I + ++EG A +Y EM G P +T +++I
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGL-INEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRP 312
LC+ R+ EA + M K P+V+T+ K + L LF M GI
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 614
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
TY+ L+ F + G + ++++M G PD ++ L
Sbjct: 615 NAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 45/260 (17%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+++M+++ + D++S++I + C K A+ + ++ K G+ DVV + T++ +
Sbjct: 100 SLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGL 159
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
V + V A+ + +M E C+P+VVT T++ LC GR+ EA A+L M + G P
Sbjct: 160 CVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219
Query: 283 ITYHC----------------FFRCLEKPREIL-----------------------GLFD 303
ITY R +E+ I+ LF
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT 279
Query: 304 RMIESGIRPKMDTYVMLLRKF---GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
M E GI P + TY ++ F GRW + ++M E SPD YNAL++A +
Sbjct: 280 EMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL---QEMLERKISPDVVTYNALINAFV 336
Query: 361 DKGMLDMARKYDEEMFAKGL 380
+G A + +EM +G+
Sbjct: 337 KEGKFFEAEELYDEMLPRGI 356
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 140/307 (45%), Gaps = 14/307 (4%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T TY+S+ID K D + ++ + M S PN TF + Y A +++ M
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS-PNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 91 NKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+++ E GL D +Y L+ + A +L E + G + T + +
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDL-LQEMISSGLCPDIVTCDTLLDGLCD 477
Query: 150 RGWFK--MSWWGKCREFWEEMDK----RGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
G K + + ++ +++D GV D+ +Y+I + + GK +A +LY+EM
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
+GI D + Y+++I + +D A +++ M P+VVT T+I C+ GRV
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 264 REAYAVLAEMPKKGCVPDVITY---HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVML 320
+ + EM ++G V + ITY C FR + L +F MI SG+ P DT +
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYP--DTITIR 655
Query: 321 LRKFGRW 327
G W
Sbjct: 656 NMLTGLW 662
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 125/259 (48%), Gaps = 12/259 (4%)
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
GE+ GF G K+ + G+ ++ + + +M + + + + M
Sbjct: 36 GESCEAGFGG----ESLKLQS----GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMG 87
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
++ + +P + LY++M++K I+ D+ ++N +I+ + FA+ + ++ ++G P
Sbjct: 88 VVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHP 147
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLF 302
VVT T++ LC RV EA +M + C P+V+T+ C E + E + L
Sbjct: 148 DVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALL 207
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG-CSPDEFAYNALVDALID 361
DRM+E G++P TY ++ + G + +KMEE+ P+ Y+A++D+L
Sbjct: 208 DRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCK 267
Query: 362 KGMLDMARKYDEEMFAKGL 380
G A+ EM KG+
Sbjct: 268 DGRHSDAQNLFTEMQEKGI 286
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 123/287 (42%), Gaps = 52/287 (18%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N++ID D L+H M + + + T+ + + +N A+ +
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTET-GLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNV-------GFSGLVEMNKTKI 144
+ GL ++ C+ L+D LC+ + +A E+ K+ F+G VE + +
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNG-VEPD-VQT 513
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK--------------- 189
YN+++ G + + E +EEM RG+V D +YS +D +CK
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 190 --------------------SGKPWKAVKLYKEMKKKGIKMDVVAYNTVI---RAVGVSE 226
+G+ ++L+ EM ++GI + + Y T+I R VG
Sbjct: 574 SKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG--- 630
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
++ A+ +++EM G P +T ++ L ++ A A+L ++
Sbjct: 631 NINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 77/179 (43%), Gaps = 17/179 (9%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ I+ + EA + ++ G+ D ++Y +++D LC+ + EA ++
Sbjct: 509 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 568
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + FS V + ++ G+ K E + EM +RG+V + +Y
Sbjct: 569 -FDSMGSKSFSPNV-----VTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI----------RAVGVSEGVDFAM 232
+ K G A+ +++EM G+ D + ++ RAV + E + +M
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMSM 681
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 143/306 (46%), Gaps = 16/306 (5%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
P+ T+ ++ + A NK+++ L+ V Y ++D LC+YKH+ +A L
Sbjct: 14 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 73
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F E + G V Y+ ++ W +M +R + D+ ++S
Sbjct: 74 -FKEMETKGIRPNV-----VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 127
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D K GK +A KLY EM K+ I +V Y+++I + + +D A +++ M C
Sbjct: 128 IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 187
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL------EKPRE 297
P VVT NT+IK C+ RV E V EM ++G V + +TY+ + L + +E
Sbjct: 188 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 247
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
I F M+ G+ P + TY LL + G L VV++ ++ P + YN +++
Sbjct: 248 I---FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 304
Query: 358 ALIDKG 363
+ G
Sbjct: 305 GMCKAG 310
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 179/383 (46%), Gaps = 34/383 (8%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY V++ L K + DL++NL+++M+ P + + +++A+ F +
Sbjct: 18 TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE-PGVLIYNTIIDGLCKYKHMDDALNLFKE 76
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE-----NKNV-GFSGLV-------- 137
++ G++ + V+Y +L+ LC Y +A L N +V FS L+
Sbjct: 77 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 136
Query: 138 ---------EMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
EM K I Y+ ++ G+ + ++ +E M + D+ +Y+
Sbjct: 137 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 196
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ CK + + +++++EM ++G+ + V YN +I+ + + D A +++EM G
Sbjct: 197 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 256
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG-- 300
P+++T NT++ LC+NG++ +A V + + P + TY+ + K ++
Sbjct: 257 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 316
Query: 301 -LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
LF + G++P + Y ++ F R G ++K+M+E G P+ YN L+ A
Sbjct: 317 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRAR 376
Query: 360 IDKGMLDMARKYDEEMFAKGLSA 382
+ G + + + +EM + G +
Sbjct: 377 LRDGDREASAELIKEMRSCGFAG 399
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 174/371 (46%), Gaps = 18/371 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C AL F +ET TY+S+I L + + + L+ M + + P
Sbjct: 62 CKYKHMDDALNLFKEMETK-GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN-P 119
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELC 124
+ TF + +V + EA ++++ + + V+Y +L++ C + + EA+++
Sbjct: 120 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 179
Query: 125 -FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F +K+ F +V YN +++G+ K + E + EM +RG+V + +Y+I
Sbjct: 180 EFMVSKHC-FPDVV------TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 232
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ + ++G A +++KEM G+ +++ YNT++ + + ++ AM V+ ++
Sbjct: 233 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 292
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPR-EILG 300
+P++ T N +I+ +C+ G+V + + + + KG PDV+ Y+ C + + E
Sbjct: 293 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 352
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE----FAYNALV 356
LF M E G P Y L+R R G + K+M G + D N L
Sbjct: 353 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLH 412
Query: 357 DALIDKGMLDM 367
D +DK LDM
Sbjct: 413 DGRLDKSFLDM 423
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 108/218 (49%), Gaps = 3/218 (1%)
Query: 166 EEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVS 225
+ M +G DL +Y + ++ +CK G A L +M++ ++ V+ YNT+I +
Sbjct: 5 DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKY 64
Query: 226 EGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
+ +D A+ +++EM G +P+VVT +++I LC GR +A +L++M ++ PDV T+
Sbjct: 65 KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 124
Query: 286 HCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE 342
K +++ L+D M++ I P + TY L+ F L +++ M
Sbjct: 125 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 184
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
C PD YN L+ ++ + EM +GL
Sbjct: 185 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 222
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 3/183 (1%)
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
L M KG + D+V Y V+ + D A + +M + +P V+ NT+I LC
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMD 315
+ + +A + EM KG P+V+TY CL + + L MIE I P +
Sbjct: 63 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
T+ L+ F + G L ++ +M + P Y++L++ LD A++ E M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182
Query: 376 FAK 378
+K
Sbjct: 183 VSK 185
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 79/170 (46%), Gaps = 11/170 (6%)
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC 291
M + M GCQP +VT V+ LC+ G A+ +L +M + P V+ Y+
Sbjct: 1 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60
Query: 292 LEKPREI---LGLFDRMIESGIRPKMDTYVMLLR---KFGRWGFLRPVFVVWKKMEELGC 345
L K + + L LF M GIRP + TY L+ +GRW + M E
Sbjct: 61 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS---DASRLLSDMIERKI 117
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+PD F ++AL+DA + +G L A K +EM + S P + L+ G
Sbjct: 118 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR--SIDPSIVTYSSLING 165
>gi|242064536|ref|XP_002453557.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
gi|241933388|gb|EES06533.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
Length = 390
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 149/331 (45%), Gaps = 45/331 (13%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
YN+VI+ LGK D + ++ +M ++ PN T+ IM T G ++
Sbjct: 47 AYNTVIEALGKNKMVDKAIFMLSKMIESDCQ-PNQFTYSIMLDVLATG-------GQLHR 98
Query: 93 LDEF-----GLKDEVSYCNLVDALCEYKHVIEA-----------------------QELC 124
L+E G + Y LV ALC+ H EA + LC
Sbjct: 99 LNEILDICSGHLNRSVYSYLVKALCKSGHASEAHSVFCRMWSSHEKGDRDAFVSMLEALC 158
Query: 125 FGENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
E L M + I YN+I K+ +++M GV D+
Sbjct: 159 NAEKTAEAIDLLHMMPEKGITTDVGMYNIIFSALGKLKQVSFMSSLYDKMKANGVAPDVF 218
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+Y+I + + G KA +L++EM K DV+ YN++I +G + +D A ++++M
Sbjct: 219 TYNIMISSFGRVGLVDKASELFEEMDDSSCKPDVITYNSMINCLGKNGDLDEAHMLFKDM 278
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE---KP 295
+E G P V T + +I+ ++ +V A ++ EM +GCVP+++TY+ CLE K
Sbjct: 279 QEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMIAQGCVPNIVTYNILLDCLERHGKT 338
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
RE L++ + + G+ P TY +L R R
Sbjct: 339 REAHKLYETLKQQGLAPDSITYSILERLESR 369
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 125/282 (44%), Gaps = 70/282 (24%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M + D ++Y+I + + K+GK K V +EM KG ++++AYNTVI A+G ++
Sbjct: 1 MKQNNCDPDAYTYTILIRMSGKAGKATKFVSFLEEMVSKGCVLNLIAYNTVIEALGKNKM 60
Query: 228 VDFAMRVYREMREMGCQPSVVTCNT--------------------------------VIK 255
VD A+ + +M E CQP+ T + ++K
Sbjct: 61 VDKAIFMLSKMIESDCQPNQFTYSIMLDVLATGGQLHRLNEILDICSGHLNRSVYSYLVK 120
Query: 256 LLCENGRVREAYAV-----------------------------------LAEMPKKGCVP 280
LC++G EA++V L MP+KG
Sbjct: 121 ALCKSGHASEAHSVFCRMWSSHEKGDRDAFVSMLEALCNAEKTAEAIDLLHMMPEKGITT 180
Query: 281 DVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVW 337
DV Y+ F L K +++ L+D+M +G+ P + TY +++ FGR G + ++
Sbjct: 181 DVGMYNIIFSALGKLKQVSFMSSLYDKMKANGVAPDVFTYNIMISSFGRVGLVDKASELF 240
Query: 338 KKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++M++ C PD YN++++ L G LD A ++M KG
Sbjct: 241 EEMDDSSCKPDVITYNSMINCLGKNGDLDEAHMLFKDMQEKG 282
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 170/377 (45%), Gaps = 18/377 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C AL F+ + D F TY ++I+ L K + L+ M+ + P
Sbjct: 146 CVEGKIGEALHLFDKM-IDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQG-NCQP 203
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALC---EYKHVIEAQ 121
+ + + V EA F+++ G+ ++ +Y +LV ALC E+KHV
Sbjct: 204 DVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLL 263
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
N+ V L ++ I++ ++ K + E + M +RGV D+ +Y+
Sbjct: 264 ------NQMVNSKILPDV---VIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYT 314
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
MD C + +AVK++ M +KG DV++Y T+I +D AM ++ EM
Sbjct: 315 TLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRK 374
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EI 298
P T NT++ LC GR+++A A+ EM +G +PD++TY L K R E
Sbjct: 375 EWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEA 434
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+ L + S + P + Y +++ R G L ++ + G P + YN ++
Sbjct: 435 MALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHG 494
Query: 359 LIDKGMLDMARKYDEEM 375
L +G+L+ A K EM
Sbjct: 495 LCKRGLLNEANKLFMEM 511
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 146/320 (45%), Gaps = 10/320 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PN T+ + + A+ +++ + D V Y +++D+LC+ + V EA L
Sbjct: 168 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNL 227
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + G S + Y ++ + W +M ++ D+ +S
Sbjct: 228 -FSQMVGQGISPDI-----FTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTV 281
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D +CK GK +A ++ M ++G++ DVV Y T++ + +D A++V+ M G
Sbjct: 282 VDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 341
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILG 300
P V++ T+I C+ ++ +A + EM +K +PD TY+ L + ++ +
Sbjct: 342 APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIA 401
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
LF M+ G P + TY +LL + L + K +E +PD YN ++D +
Sbjct: 402 LFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMC 461
Query: 361 DKGMLDMARKYDEEMFAKGL 380
G L+ AR + +KGL
Sbjct: 462 RAGELEAARDLFSNLSSKGL 481
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 3/217 (1%)
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
+MD GV ++++ +I ++ C + A + ++ K G + D + T+IR + V
Sbjct: 90 QMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEG 149
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
+ A+ ++ +M + G QP+VVT T+I LC+ G A +L M + C PDV+ Y
Sbjct: 150 KIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYT 209
Query: 287 CFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
L K R++ LF +M+ GI P + TY L+ + V + +M
Sbjct: 210 SIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNS 269
Query: 344 GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
PD ++ +VDAL +G + A + + M +G+
Sbjct: 270 KILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGV 306
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 134/312 (42%), Gaps = 20/312 (6%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C +WK N + + +++V+D L K + + ++ M P
Sbjct: 251 CNLCEWKHVTTLLNQM-VNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVE-P 308
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEA---- 120
+ T+ + + ++EA+ F+ + G D +SY L++ C+ + +A
Sbjct: 309 DVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLF 368
Query: 121 QELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+E+C E + TK YN ++ G + + EM RG + DL +Y
Sbjct: 369 EEMCRKE----------WIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTY 418
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
SI +D +CK+ +A+ L K ++ + D+ YN +I + + ++ A ++ +
Sbjct: 419 SILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSS 478
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL- 299
G PSV T N +I LC+ G + EA + EM C PD TY+ R + E L
Sbjct: 479 KGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLR 538
Query: 300 --GLFDRMIESG 309
L + M+ G
Sbjct: 539 AIQLLEEMLARG 550
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 161/410 (39%), Gaps = 70/410 (17%)
Query: 15 LEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
L FF+ + +F + +N++ D L F N + M PS + F +
Sbjct: 26 LPFFS--SSQNNFHSKSLHFNTLDDALSSF-------NRLLHMHPPPSIV----DFAKLL 72
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGF 133
+ + ++D FG+ V N L+++ C V F
Sbjct: 73 TSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRV------------GFAF 120
Query: 134 SGLVEMNK------TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
S L ++ K + ++RG G+ +++M G ++ +Y ++ +
Sbjct: 121 SVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGL 180
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
CK G A++L + M++ + DVV Y ++I ++ V A ++ +M G P +
Sbjct: 181 CKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDI 240
Query: 248 VT--------CN---------------------------TVIKLLCENGRVREAYAVLAE 272
T CN TV+ LC+ G+V EA+ ++
Sbjct: 241 FTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDM 300
Query: 273 MPKKGCVPDVITYHCFF--RCLEKP-REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M ++G PDV+TY CL+ E + +FD M+ G P + +Y L+ + +
Sbjct: 301 MIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHK 360
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ ++++M PD YN L+ L G L A EM A+G
Sbjct: 361 IDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARG 410
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 3/174 (1%)
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
+V + ++ ++ + + + +M G P+V T N +I C RV A++VL
Sbjct: 64 SIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVL 123
Query: 271 AEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
A++ K G PD T+ R C+E K E L LFD+MI+ G +P + TY L+ +
Sbjct: 124 AKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKV 183
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G + + ME+ C PD Y +++D+L + A +M +G+S
Sbjct: 184 GNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGIS 237
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 11/226 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKL-DEFGLKDEVSYCNLVDALCEYKHVIEAQEL 123
P+ ++ + Y H +++AM F ++ + + D +Y L+ LC + +A L
Sbjct: 343 PDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIAL 402
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F E G +M Y+++L K + + ++ + D+ Y+I
Sbjct: 403 -FHEMVARG-----QMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNII 456
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D MC++G+ A L+ + KG+ V YN +I + ++ A +++ EM C
Sbjct: 457 IDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDC 516
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF 289
P T NT+ + +N A +L EM +G D CF
Sbjct: 517 SPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSAD----SCFL 558
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 157/354 (44%), Gaps = 27/354 (7%)
Query: 46 EFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SY 104
+FD+++ +I M +P+ +T+ + A V +A F ++ G+ +V +Y
Sbjct: 268 KFDMAFQIIKVMMGK-GFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTY 326
Query: 105 CNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREF 164
L+D+ C+ +IE F E +++G S V Y +L + K + +
Sbjct: 327 TILIDSFCK-AGLIEQARSWFDEMRSIGCSANV-----VTYTALLHAYLKAKQLPQASDI 380
Query: 165 WEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM----------------KKKGI 208
+ M G + +YS +D +CK+G+ KA ++Y ++ I
Sbjct: 381 FNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSI 440
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+VV Y +I + + V A + M GC+P+ + + +I C+ G++ A
Sbjct: 441 APNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQE 500
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFG 325
V M K G +P V TY + K R + + + +M+ES P + TY ++
Sbjct: 501 VFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLC 560
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R G + + MEE GCSP+ Y AL+D L G +D++ + +M KG
Sbjct: 561 RIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKG 614
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 142/324 (43%), Gaps = 15/324 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +ID K + + + M+ S N T+ + Y+ A + +A FN+
Sbjct: 325 TYTILIDSFCKAGLIEQARSWFDEMRSIGCS-ANVVTYTALLHAYLKAKQLPQASDIFNR 383
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL---CFGENKNVGFSGLVEMNKTK----- 143
+ + G + ++Y LVD LC+ + +A E+ G + NVG E T
Sbjct: 384 MIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPN 443
Query: 144 --IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
Y ++ G K +E + M G + Y +D CK GK A +++
Sbjct: 444 VVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFL 503
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
M K G V Y ++I A+ +D AM+V +M E C P+VVT +I LC G
Sbjct: 504 RMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIG 563
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYV 318
++A +L+ M +KGC P+V+TY L K ++ L LF +M G P TY
Sbjct: 564 ECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYR 623
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEE 342
+L+ G L + +M++
Sbjct: 624 VLINHCCAAGLLDEAHSLLSEMKQ 647
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 172/394 (43%), Gaps = 29/394 (7%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM---------- 57
A +A + FN + D T TY++++D L K E + + ++
Sbjct: 371 AKQLPQASDIFNRM-IDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSD 429
Query: 58 -----KDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDAL 111
K S PN T+ + AH V +A + + G + + + Y L+D
Sbjct: 430 FYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGF 489
Query: 112 CEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKR 171
C+ + AQE+ F G+ + Y ++ FK + +M +
Sbjct: 490 CKVGKIDNAQEV-FLRMSKCGY-----LPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVES 543
Query: 172 GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFA 231
++ +Y+ +D +C+ G+ KA+KL M++KG +VV Y +I +G S VD +
Sbjct: 544 SCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLS 603
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC 291
++++ +M GC P+ VT +I C G + EA+++L+EM K+ P + +C
Sbjct: 604 LQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEM-KQTYWPKYLQGYCSVVQ 662
Query: 292 LEKPREI--LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE 349
+ I LGL + + G P Y +L+ F + G L + K+M EL S +
Sbjct: 663 GFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNI 722
Query: 350 FA---YNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ Y +L+ AL L+ A + E+ KG+
Sbjct: 723 TSKDMYTSLIQALCLASQLEKAFELYSEITRKGV 756
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 161/369 (43%), Gaps = 27/369 (7%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F T TY+ VI L + + + ++ L MK + P+ T+ I+ + A L+ +A
Sbjct: 284 FVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVN-PDVYTYTILIDSFCKAGLIEQA 342
Query: 87 MGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
F+++ G + V+Y L+ A + K + +A ++ F + G T Y
Sbjct: 343 RSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDI-FNRMIDAGCP-----PNTITY 396
Query: 146 NMILRGWFKMSWWGKCREFWEEM----DKRG------------VVKDLHSYSIYMDIMCK 189
+ ++ G K K E + ++ D G + ++ +Y +D +CK
Sbjct: 397 SALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCK 456
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
+ K A +L M G + + + Y+ +I +D A V+ M + G P+V T
Sbjct: 457 AHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHT 516
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMI 306
++I + ++ R+ A VL++M + C P+V+TY L + E L L M
Sbjct: 517 YTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMME 576
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
E G P + TY L+ G+ G + ++ +M GC+P+ Y L++ G+LD
Sbjct: 577 EKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLD 636
Query: 367 MARKYDEEM 375
A EM
Sbjct: 637 EAHSLLSEM 645
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 113/251 (45%), Gaps = 21/251 (8%)
Query: 164 FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
++EM GV D+++Y+I +D CK+G +A + EM+ G +VV Y ++ A
Sbjct: 310 LFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYL 369
Query: 224 VSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM---------- 273
++ + A ++ M + GC P+ +T + ++ LC+ G +++A V ++
Sbjct: 370 KAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSD 429
Query: 274 ------PKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKF 324
P+V+TY L K +++ L D M+ +G P Y L+ F
Sbjct: 430 FYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGF 489
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
+ G + V+ +M + G P Y +L+DA+ LD+A K +M S P
Sbjct: 490 CKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVES--SCTP 547
Query: 385 REELGTKLVQG 395
T ++ G
Sbjct: 548 NVVTYTAMIDG 558
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 160/374 (42%), Gaps = 33/374 (8%)
Query: 47 FDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN 106
FD + + +HRM+ N S IPN T+R + ++ + N + + G S N
Sbjct: 123 FDEAISFLHRMRCN-SCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFN 181
Query: 107 -LVDALCEYKHVIEAQELCFGENKNVGFS-GLVEMNKTKIYNMILRGWFKMS---WWGKC 161
LV + C + A +L + G G V N I+ + G ++
Sbjct: 182 SLVHSYCNARDYPYAYKL-LKRMADCGCPPGYVAYN---IFIGSICGGEELPSPDLLALA 237
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
+ +EEM V + + + + +C GK A ++ K M KG D Y+ VI
Sbjct: 238 EKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITF 297
Query: 222 VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
+ + V+ A +++EM+ +G P V T +I C+ G + +A + EM GC +
Sbjct: 298 LCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSAN 357
Query: 282 VITY----HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVW 337
V+TY H + + + P+ +F+RMI++G P TY L+ + G ++ V+
Sbjct: 358 VVTYTALLHAYLKAKQLPQAS-DIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVY 416
Query: 338 KKM----EELGC------------SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
K+ + +G +P+ Y AL+D L + A++ + M + G
Sbjct: 417 TKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNG-- 474
Query: 382 AKPREELGTKLVQG 395
+P + L+ G
Sbjct: 475 CEPNHIIYDALIDG 488
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 107/254 (42%), Gaps = 17/254 (6%)
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
T + ++ G + S + + F M + ++ +Y + K + ++
Sbjct: 107 TVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIIN 166
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
M K+G + +N+++ + + +A ++ + M + GC P V N I +C
Sbjct: 167 MMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGE 226
Query: 262 RVRE------AYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDR-------MIES 308
+ A V EM CV + + F RCL +G FD M+
Sbjct: 227 ELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCG----MGKFDMAFQIIKVMMGK 282
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G P TY ++ + F+++++M+ +G +PD + Y L+D+ G+++ A
Sbjct: 283 GFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQA 342
Query: 369 RKYDEEMFAKGLSA 382
R + +EM + G SA
Sbjct: 343 RSWFDEMRSIGCSA 356
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 83/219 (37%), Gaps = 43/219 (19%)
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE---------MGC--------- 243
E+K G + YN +++ + + +D RV +EM E +GC
Sbjct: 30 ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89
Query: 244 --------------QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF 289
+ V C +I L E EA + L M C+P+V+TY
Sbjct: 90 RWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLL 149
Query: 290 RCLEKPREILG----LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
K ++ LG + + M++ G P + L+ + + + K+M + GC
Sbjct: 150 TGFLKKKQ-LGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGC 208
Query: 346 SPDEFAYNALVDA------LIDKGMLDMARKYDEEMFAK 378
P AYN + + L +L +A K EEM A
Sbjct: 209 PPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLAS 247
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 120/276 (43%), Gaps = 13/276 (4%)
Query: 23 TDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHL 82
+ C + T TY S+ID + K DL+ ++ +M ++ S PN T+ M
Sbjct: 506 SKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVES-SCTPNVVTYTAMIDGLCRIGE 564
Query: 83 VNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
+A+ + ++E G + V+Y L+D L + V + +L F + G +
Sbjct: 565 CQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQL-FIQMSTKGCA-----PN 618
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
Y +++ + EM + K L Y + K K ++ L +
Sbjct: 619 YVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSK--KFIASLGLLE 676
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN---TVIKLLC 258
E++ G Y +I + ++ A+ +++EM E+ ++ + + ++I+ LC
Sbjct: 677 ELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALC 736
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
++ +A+ + +E+ +KG VP++ + C + L K
Sbjct: 737 LASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIK 772
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 171/375 (45%), Gaps = 18/375 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+++I+ K +F ++ L+ M+ +P++A + + K V+ A+ +
Sbjct: 35 TYSTLINGFCKARDFQQAYRLLDEMEKR-GIVPHNAVYNTIIKGLCDNGRVDSALVHYRD 93
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ ++Y LVDALC+ + +A L + G + V YN ++ G+
Sbjct: 94 MQRHCAPSVITYTILVDALCKSARISDA-SLILEDMIEAGCAPNV-----VTYNTLINGF 147
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K+ + + +M + D+ +Y+I +D CK +P KL +EM K G + +
Sbjct: 148 CKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNF 207
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
+ YNT++ ++ S A + + M C+PS T N +I + C+ G++ AY +
Sbjct: 208 ITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQL 267
Query: 273 MPKKGCVPDVITYH------CFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
M +GC+PD+ TY+ C ++ R++L +RM E+G P + TY ++ +
Sbjct: 268 MTDRGCLPDIYTYNIMISGACRANRIDDARQLL---ERMTEAGCPPDVVTYNSIVSGLCK 324
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPRE 386
+ + V++ + G D + L+D L LD A K EM G + P
Sbjct: 325 ASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNG--SAPDV 382
Query: 387 ELGTKLVQGGLDGEQ 401
T L+ G +Q
Sbjct: 383 VAYTILIHGFCKADQ 397
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 154/320 (48%), Gaps = 19/320 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++I+ K D + L ++M +N S P+ T+ I+ Y + +
Sbjct: 139 TYNTLINGFCKLGNMDEAVVLFNQMLENSCS-PDVFTYNILIDGYCKQERPQDGAKLLQE 197
Query: 93 LDEFGLKDE-VSYCNLVDALCEYKHVIEA----QELCFGENKNVGFSGLVEMNKTKIYNM 147
+ ++G + ++Y L+D+L + I+A Q + + K F+ +N+
Sbjct: 198 MVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFT----------FNL 247
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++ + K+ E ++ M RG + D+++Y+I + C++ + A +L + M + G
Sbjct: 248 MIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAG 307
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
DVV YN+++ + + VD A VY +R G VVTC+T+I LC++ R+ +A
Sbjct: 308 CPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAE 367
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKF 324
+L EM + G PDV+ Y K ++ L F M++ G P + TY +++ K
Sbjct: 368 KLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKL 427
Query: 325 GRWGFLRPVFVVWKKMEELG 344
+ +R ++ K M E G
Sbjct: 428 CKSARVRDGCMLLKTMLERG 447
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 141/311 (45%), Gaps = 11/311 (3%)
Query: 73 MFKRYVTAHLVNEAMGTF-NKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNV 131
+ +V EA F N L D ++Y L++ C+ + +A L K
Sbjct: 4 LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKR- 62
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
G+V N +YN I++G + +M +R + +Y+I +D +CKS
Sbjct: 63 ---GIVPHNA--VYNTIIKGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKSA 116
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
+ A + ++M + G +VV YNT+I +D A+ ++ +M E C P V T N
Sbjct: 117 RISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYN 176
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFD---RMIES 308
+I C+ R ++ +L EM K GC P+ ITY+ L K + + F+ M+
Sbjct: 177 ILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRR 236
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
+P T+ +++ F + G L + +++ M + GC PD + YN ++ +D A
Sbjct: 237 DCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDA 296
Query: 369 RKYDEEMFAKG 379
R+ E M G
Sbjct: 297 RQLLERMTEAG 307
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 97/228 (42%), Gaps = 37/228 (16%)
Query: 15 LEFFNWVET----DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
++ FN + DC +H T +N +ID+ K + DL++ L M D +P+ T+
Sbjct: 224 IDAFNLAQMMLRRDCKPSHFT--FNLMIDMFCKVGQLDLAYELFQLMTDR-GCLPDIYTY 280
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE------- 122
IM A+ +++A ++ E G D V+Y ++V LC+ V EA E
Sbjct: 281 NIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRN 340
Query: 123 ----------------LCFGENKNVGFSGLVEMNKTK------IYNMILRGWFKMSWWGK 160
LC + L EM + Y +++ G+ K K
Sbjct: 341 GGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDK 400
Query: 161 CREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
F+ EM +G V + +YSI +D +CKS + L K M ++G+
Sbjct: 401 SLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 154/351 (43%), Gaps = 37/351 (10%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCE---------- 113
P+ ATF + + + EA+ F+K+ G + D V+Y L++ LC+
Sbjct: 129 PDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRL 188
Query: 114 ---------------YKHVIEAQELCFGENKNVGFSGLVEMNKTKI------YNMILRGW 152
Y +I++ LC F+ EM I YN ++
Sbjct: 189 LGSMVQKNCQPNVFAYNTIIDS--LCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHAL 246
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
+ W EM ++ D+ S++ +D +CK GK +A + +M ++G++ +V
Sbjct: 247 CNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNV 306
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V Y ++ + +D A++V+ M GC P+V++ NT+I C+ R+ +A + E
Sbjct: 307 VTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGE 366
Query: 273 MPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M ++ +PD +TY L E+ ++ + LF M+ P + TY +LL + +
Sbjct: 367 MCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRY 426
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
L + K +E PD N +D + G L+ AR + +KGL
Sbjct: 427 LAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGL 477
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 168/362 (46%), Gaps = 29/362 (8%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYV-------TAHLVNEA 86
YN++ID L K + ++NL M S P+ T+ + A L+NE
Sbjct: 204 YNTIIDSLCKDRQVTEAFNLFSEMVTKGIS-PDIFTYNSLIHALCNLCEWKHVATLLNEM 262
Query: 87 MGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYN 146
+D + D VS+ +VDALC+ V EA ++ +K + VE N Y
Sbjct: 263 ------VDSKIMPDVVSFNTVVDALCKEGKVTEAHDVV---DKMIQRG--VEPNVVT-YT 310
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++ G +S + + ++ M +G + ++ SY+ ++ CK + KA+ L+ EM ++
Sbjct: 311 ALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQ 370
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
+ D V Y+T+I + E + A+ ++ EM P++VT ++ LC+N + EA
Sbjct: 371 ELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEA 430
Query: 267 YAVLAEMPKKGCVPDV------ITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVML 320
A+L + PD+ I C LE R+ LF + G++P + TY ++
Sbjct: 431 MALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARD---LFSNLSSKGLQPDVWTYSIM 487
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ R G L ++++M+E GC+ + YN + + A + +EM A+G
Sbjct: 488 INGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGF 547
Query: 381 SA 382
SA
Sbjct: 548 SA 549
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 116/254 (45%), Gaps = 5/254 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+N +L KM +MD G+ ++++ I ++ C + A + ++
Sbjct: 64 FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K G + D + T+IR + V + A+ ++ +M G +P VVT T+I LC+ G
Sbjct: 124 KLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS 183
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
A +L M +K C P+V Y+ L K R++ LF M+ GI P + TY L+
Sbjct: 184 AAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLI 243
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ V + +M + PD ++N +VDAL +G + A ++M +G+
Sbjct: 244 HALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGV- 302
Query: 382 AKPREELGTKLVQG 395
+P T L+ G
Sbjct: 303 -EPNVVTYTALMDG 315
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 113/237 (47%), Gaps = 3/237 (1%)
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
++++ + ++ G ++ K G D +++ + + GK +A+ L+ +M
Sbjct: 100 HILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIG 159
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+G + DVV Y T+I + A+R+ M + CQP+V NT+I LC++ +V E
Sbjct: 160 EGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTE 219
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLR 322
A+ + +EM KG PD+ TY+ L + + L + M++S I P + ++ ++
Sbjct: 220 AFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVD 279
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ G + V KM + G P+ Y AL+D +D A K + M KG
Sbjct: 280 ALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKG 336
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 3/189 (1%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A+ + M + V +N ++ ++ + + + +M G P++ T + +I
Sbjct: 45 AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILIN 104
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRP 312
C RV A++VLA++ K G PD T+ R + K E L LFD+MI G RP
Sbjct: 105 SFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRP 164
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
+ TY L+ + G + M + C P+ FAYN ++D+L + A
Sbjct: 165 DVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLF 224
Query: 373 EEMFAKGLS 381
EM KG+S
Sbjct: 225 SEMVTKGIS 233
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 102/231 (44%), Gaps = 7/231 (3%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKL-DEFGLKDEVSYCNLVDALCEYKHVIEAQE 122
+PN ++ + Y +++AM F ++ + + D V+Y L+ LC + + +A
Sbjct: 338 MPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIA 397
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L F E ++ Y ++L K + + + ++ + D+ +I
Sbjct: 398 L-FHE-----MVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNI 451
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D MC++G+ A L+ + KG++ DV Y+ +I + +D A +++REM E G
Sbjct: 452 AIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENG 511
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE 293
C + NT+ + N A +L EM +G D T F + L
Sbjct: 512 CTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLS 562
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 111/241 (46%), Gaps = 8/241 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+YN++I+ K D + L M IP+ T+ + + +A+ F++
Sbjct: 343 SYNTLINGYCKIQRIDKAMYLFGEMCRQ-ELIPDTVTYSTLIHGLCHVERLQDAIALFHE 401
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + + V+Y L+D LC+ +++ EA L K + S L ++ N+ + G
Sbjct: 402 MVACSQIPNLVTYRILLDYLCKNRYLAEAMALL----KAIEGSNLDP--DIQVNNIAIDG 455
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ R+ + + +G+ D+ +YSI ++ +C+ G +A KL++EM + G ++
Sbjct: 456 MCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLN 515
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
YNT+ R + A+++ +EM G T +K+L ++G + +L
Sbjct: 516 GCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILR 575
Query: 272 E 272
E
Sbjct: 576 E 576
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 163/340 (47%), Gaps = 22/340 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY S+I L K + D ++ L+ M+D P A + + A +A+G F
Sbjct: 32 TYGSLIHGLCKAGKLDQAYELLDEMRDRGIP-PGVAVHNGVIRGLCKAGRFGDALGYFKT 90
Query: 93 LDEFGLK---DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+ G K D +++ LVDAL + V EA ++ E+ + L Y ++
Sbjct: 91 V--AGTKCTPDIITFNILVDALVKSGRVEEAFQI--FESMHTSSQCL---PNVVTYTTVI 143
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G K + E + M++ G ++ +YS+ ++ +CK+G+ K L +EM ++G +
Sbjct: 144 NGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQ 203
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
DV+ YNT++ + S +D A+ + + M GC P+VVT N++++L C + +V A+ +
Sbjct: 204 PDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRL 263
Query: 270 LAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLL----- 321
+ M ++GC PDVI Y+ L + + L +M+ + P + TY ++
Sbjct: 264 IQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCK 323
Query: 322 --RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
R W L + + M++ GC P+ Y +++ L
Sbjct: 324 DWRVDADWK-LEAACEILEMMKQTGCPPNAGTYAVVIEGL 362
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 4/210 (1%)
Query: 174 VKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMR 233
V + +Y + +CK+GK +A +L EM+ +GI V +N VIR + + A+
Sbjct: 27 VPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALG 86
Query: 234 VYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM-PKKGCVPDVITYHCFFRCL 292
++ + C P ++T N ++ L ++GRV EA+ + M C+P+V+TY L
Sbjct: 87 YFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGL 146
Query: 293 EKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE 349
K ++ + L D M E+G P + TY +L+ + G F + ++M G PD
Sbjct: 147 CKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDV 206
Query: 350 FAYNALVDALIDKGMLDMARKYDEEMFAKG 379
YN L++ L LD A + + M G
Sbjct: 207 IMYNTLLNGLCKSRRLDEALELVQLMIRSG 236
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 167/409 (40%), Gaps = 41/409 (10%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
+ A + F + T TY +VI+ L K + D + L+ M + PN T+
Sbjct: 117 EEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNET-GCCPNVITYS 175
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL------- 123
++ + A ++ ++ G + D + Y L++ LC+ + + EA EL
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRS 235
Query: 124 ----------------CFGENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKC 161
C + + F + M++ YN ++ G + +
Sbjct: 236 GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDA 295
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKS---GKPWK---AVKLYKEMKKKGIKMDVVAY 215
+ ++M V D+ +YS +D +CK WK A ++ + MK+ G + Y
Sbjct: 296 QALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTY 355
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
VI + + A+ + R M + P + + + VI LC++ + AY + M +
Sbjct: 356 AVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSE 415
Query: 276 KGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
+ C P+ + Y L K E+ + +F+ M+ES RP + TY +L G +
Sbjct: 416 RECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEE 474
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ + M C PD +Y AL+ L ++ A + + + AKG +
Sbjct: 475 AVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFA 523
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 155/355 (43%), Gaps = 16/355 (4%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN++++ L K D + L+ M + P T+ + + + + V+ A +
Sbjct: 209 YNTLLNGLCKSRRLDEALELVQLMIRS-GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM 267
Query: 94 DEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVE--MNKTKIYNMILR 150
E G D ++Y ++ LC + +AQ L K + + V + + I + + +
Sbjct: 268 SERGCPPDVINYNTVIAGLCRDARLDDAQALL----KQMVAARCVPDVITYSTIIDGLCK 323
Query: 151 GWFKMSWW---GKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
W + W C E E M + G + +Y++ ++ +C++ K +A+ L + M
Sbjct: 324 DWRVDADWKLEAAC-EILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSE 382
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ D+ +++ VI ++ S +D A +++ M E C+P+ V +I L + G V +A
Sbjct: 383 VVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAV 442
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
V E+ + P V TY+ L + E + + + MI P +Y L+R
Sbjct: 443 RVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGL 501
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R + + +++ +E G + + YN LV+ L K L A ++ G
Sbjct: 502 CRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 11/159 (6%)
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
A N ++RA + A++++RE R C P+ T ++I LC+ G++ +AY +L EM
Sbjct: 4 ALNLLVRAGQHGQ----AVQLFREER---CVPNEFTYGSLIHGLCKAGKLDQAYELLDEM 56
Query: 274 PKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
+G P V ++ R L K + LG F + + P + T+ +L+ + G +
Sbjct: 57 RDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRV 116
Query: 331 RPVFVVWKKMEELG-CSPDEFAYNALVDALIDKGMLDMA 368
F +++ M C P+ Y +++ L G LD A
Sbjct: 117 EEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRA 155
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 177/370 (47%), Gaps = 19/370 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N VI+ F+ L+ +++ +M P+ T + + + V++A+ +K
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYE-PDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G K D V+Y ++D+LC+ K V +A + F E + G V Y ++ G
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF-FKEIERKGIRPNVV-----TYTALVNG 234
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
S W +M K+ + ++ +YS +D K+GK +A +L++EM + I D
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+V Y+++I + + + +D A +++ M GC VV+ NT+I C+ RV + +
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354
Query: 272 EMPKKGCVPDVITYHC----FFRC--LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
EM ++G V + +TY+ FF+ ++K +E F +M GI P + TY +LL
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE---FFSQMDFFGISPDIWTYNILLGGLC 411
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
G L V+++ M++ D Y ++ + G ++ A + KGL KP
Sbjct: 412 DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL--KPD 469
Query: 386 EELGTKLVQG 395
T ++ G
Sbjct: 470 IVTYTTMMSG 479
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 138/276 (50%), Gaps = 15/276 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDIL---GKFFEFDLSWNLIHRMKDNPS 62
C ++ W A + + T TY++++D GK E + + RM +P
Sbjct: 236 CNSSRWSDAARLLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQ 121
+ T+ + ++EA F+ + G L D VSY L++ C+ K V +
Sbjct: 295 IV----TYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
+L F E G ++ T YN +++G+F+ K +EF+ +MD G+ D+ +Y+
Sbjct: 351 KL-FREMSQRGL-----VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
I + +C +G+ KA+ ++++M+K+ + +D+V Y TVIR + + V+ A ++ +
Sbjct: 405 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
G +P +VT T++ LC G + E A+ +M ++G
Sbjct: 465 GLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 115/241 (47%), Gaps = 3/241 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+N +L K+ + ++M+ G+ DL++++I ++ C + A+ + +M
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K G + D V +++ V A+ + +M E+G +P +V N +I LC+ RV
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLL 321
+A+ E+ +KG P+V+TY L + + L MI+ I P + TY LL
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
F + G + ++++M + PD Y++L++ L +D A + + M +KG
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 382 A 382
A
Sbjct: 328 A 328
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 108/239 (45%), Gaps = 11/239 (4%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+ + +M K + ++ + + K K + L K+M+ GI+ D+ +N VI
Sbjct: 71 DLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCF 130
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
V A+ + +M ++G +P VT +++ C RV +A +++ +M + G PD+
Sbjct: 131 CCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDI 190
Query: 283 ITYHCFFRCLEKPREILGLFDRMIE---SGIRPKMDTYVMLLRKF---GRWGFLRPVFVV 336
+ Y+ L K + + FD E GIRP + TY L+ RW +
Sbjct: 191 VAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS---DAARL 247
Query: 337 WKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
M + +P+ Y+AL+DA + G + A++ EEM +S P + L+ G
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR--MSIDPDIVTYSSLING 304
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 160/355 (45%), Gaps = 14/355 (3%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
+T+N I L K + L+ RM + PN T+ ++ V+EA
Sbjct: 305 VNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFT-PNSFTYGVLMHGLCRMGKVDEARMLL 363
Query: 91 NKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
NK+ + V + L++ + EA+ + +VG YN ++
Sbjct: 364 NKVPN---PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGP-----DIFTYNTLIL 415
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
G K + RE EM +G ++ +Y+I +D CK G+ +A + EM KG+ +
Sbjct: 416 GLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLAL 475
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
+ V YN +I A+ E V A+ ++ +M GC+P + T N++I LC+ + EA +
Sbjct: 476 NAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLY 535
Query: 271 AEMPKKGCVPDVITY----HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
+M +G + + ITY H F R +E L L + M+ G TY L++ R
Sbjct: 536 QDMLLEGVIANTITYNTLIHAFLR-RGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCR 594
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G + +++ M G +P+ + N L++ L G + A ++ +M +GL+
Sbjct: 595 AGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLT 649
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 160/335 (47%), Gaps = 11/335 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++I L K + L++ M+ PN T+ I+ R+ + EA ++
Sbjct: 409 TYNTLILGLCKKGYLVSARELMNEMQIKGCE-PNVITYTILIDRFCKEGRLEEARNVLDE 467
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ GL + V Y L+ ALC+ + V +A + FG+ + G +N ++ G
Sbjct: 468 MSGKGLALNAVGYNCLISALCKDEKVQDALNM-FGDMSSKGCKP-----DIFTFNSLIFG 521
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K++ + + +++M GV+ + +Y+ + + G +A+KL +M +G +D
Sbjct: 522 LCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLD 581
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ YN +I+A+ + ++ + ++ +M G P+ ++CN +I LC G ++ A L
Sbjct: 582 DITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLR 641
Query: 272 EMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+M +G PD++TY+ L K +E L LFD++ GI P TY L+ + G
Sbjct: 642 DMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEG 701
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
++ + + G P+E + LV I +G
Sbjct: 702 MFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 736
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 118/277 (42%), Gaps = 40/277 (14%)
Query: 141 KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVK---DLHSYSIYMDIMCKSGKPWKAV 197
+ ++ +I++ + + G+ +D RGV SY++ +D++ P
Sbjct: 163 RESLFILIMKHYGRAGLPGQATRLL--LDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVP 220
Query: 198 KLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLL 257
++ EM KGI V + V++A+ + VD A + ++M GC P+ + T+I L
Sbjct: 221 NVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHAL 280
Query: 258 CENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKM 314
+ GRV E +L EM GC+PDV T++ L K E L DRM+ G P
Sbjct: 281 SKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNS 340
Query: 315 DTYVMLLRKFGRWG-------FLRPV-------------------------FVVWKKMEE 342
TY +L+ R G L V V+ + M
Sbjct: 341 FTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLS 400
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+GC PD F YN L+ L KG L AR+ EM KG
Sbjct: 401 VGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKG 437
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 156/363 (42%), Gaps = 24/363 (6%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T +YN V+D+L + N+ + M S P TF ++ K + V+ A
Sbjct: 199 TFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGIS-PTVYTFGVVMKALCLVNEVDSACAL 257
Query: 90 FNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
+ G + + + Y L+ AL + V E + + + G + +N
Sbjct: 258 LKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLK----LLEEMLLMGCIP--DVNTFNDA 311
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G KM + + + M RG + +Y + M +C+ GK +A L ++
Sbjct: 312 IHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNP-- 369
Query: 209 KMDVVAYNTVIRAVGVSEG-VDFAMRVYRE-MREMGCQPSVVTCNTVIKLLCENGRVREA 266
+VV +NT+I VS G +D A V E M +GC P + T NT+I LC+ G + A
Sbjct: 370 --NVVLFNTLINGY-VSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSA 426
Query: 267 YAVLAEMPKKGCVPDVITYHCFFR--C----LEKPREILGLFDRMIESGIRPKMDTYVML 320
++ EM KGC P+VITY C LE+ R +L D M G+ Y L
Sbjct: 427 RELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL---DEMSGKGLALNAVGYNCL 483
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + ++ ++ M GC PD F +N+L+ L + A ++M +G+
Sbjct: 484 ISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGV 543
Query: 381 SAK 383
A
Sbjct: 544 IAN 546
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 85/216 (39%), Gaps = 33/216 (15%)
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK-GIKMDVVAYNTVIRAVGVS 225
+M + G+V + + M ++G P +A +L +M+ + +YN V+ +
Sbjct: 154 QMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAG 213
Query: 226 EGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
V+ EM G P+V T V+K LC V A A+L +M + GCVP+ I Y
Sbjct: 214 NCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVY 273
Query: 286 HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
T + L K GR + V + ++M +GC
Sbjct: 274 Q-----------------------------TLIHALSKVGR---VNEVLKLLEEMLLMGC 301
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
PD +N + L + A K + M +G +
Sbjct: 302 IPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFT 337
>gi|224141335|ref|XP_002324029.1| predicted protein [Populus trichocarpa]
gi|222867031|gb|EEF04162.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 181/395 (45%), Gaps = 19/395 (4%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
+DW+R+L +W+ ++ + YN V+ + + ++D + L M+ N + P+
Sbjct: 85 SDWQRSLALLDWINDIARYSPSVFAYNVVLRNVLRAKQWDHAHGLFDEMR-NRALAPDRY 143
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVD---ALCEYKHVIEAQELC 124
T+ + + A + + ++ ++++ + D V Y NL++ LC+Y I
Sbjct: 144 TYSTLITHFGKAGMFDASLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAIS----I 199
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F K G M YN ++ + K + + + +EM + GV+ D SYS +
Sbjct: 200 FMRLKRSGI-----MPDLVAYNSMINVFGKAKLFREAKLLMKEMREVGVMPDTVSYSTLL 254
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ ++ K +A+ ++ EM + +D+ N +I G + A R++ MR+MG +
Sbjct: 255 SVYVENEKFVEALSVFAEMNEAKCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIE 314
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE---ILGL 301
P+VV+ NT++++ E EA + M KK +V+TY+ + K E L
Sbjct: 315 PNVVSYNTLLRVYGETELFGEAIHLFRLMQKKDIEQNVVTYNTMIKVYGKSLEHEKATNL 374
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
M GI P TY ++ +G+ G L ++++K+ G D+ Y ++ A
Sbjct: 375 MQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYER 434
Query: 362 KGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGG 396
G++ A++ E+ K + PRE L + G
Sbjct: 435 SGLVAHAKRLLHEL--KHPDSIPRETAIKILARAG 467
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 158/357 (44%), Gaps = 39/357 (10%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
YNS+I++ GK F + L+ M++ +P+ ++ + YV EA+ F +
Sbjct: 214 AYNSMINVFGKAKLFREAKLLMKEMRE-VGVMPDTVSYSTLLSVYVENEKFVEALSVFAE 272
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFG------ENKNVGFSGLVE------- 138
++E +++ CN ++D + EA L + E V ++ L+
Sbjct: 273 MNEAKCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGETEL 332
Query: 139 ----------MNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
M K I YN +++ + K K +EM RG+ + +YS
Sbjct: 333 FGEAIHLFRLMQKKDIEQNVVTYNTMIKVYGKSLEHEKATNLMQEMQNRGIEPNAITYST 392
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ I K+GK +A L+++++ G+++D V Y T+I A S V A R+ E++
Sbjct: 393 IISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERSGLVAHAKRLLHELK--- 449
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC---FFRCLEKPREIL 299
P + T IK+L GR+ EA V + G V D+ + C F KP ++
Sbjct: 450 -HPDSIPRETAIKILARAGRIEEATWVFRQAFDAGEVKDISVFGCMVDLFSRNRKPANVI 508
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS-PDEFAYNAL 355
+F++M +G P + ++L +G+ ++K+M+E C PDE + L
Sbjct: 509 EVFEKMRGAGYFPDSNVIALVLNAYGKLHEFEKADALYKEMQEEECVFPDEVHFQML 565
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 180/418 (43%), Gaps = 46/418 (11%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A EF N + + F T +Y +V+ L ++ L M + + +PN TF ++
Sbjct: 234 AREFLNRLSSY-GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK-NCMPNEVTFDML 291
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV-DALCEYKHVIEAQELCFGENKNVG 132
+ + +V A+ ++ G + CN+V + +C+ V +A F N+G
Sbjct: 292 VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDA----FQFLNNMG 347
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
G T Y +L+G + W +E +EM ++ + +++ ++ I+C+ G
Sbjct: 348 SYGCSP--DTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGL 405
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY----------------- 235
+A L ++M + G ++++V YN ++ V VD A+ ++
Sbjct: 406 IEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLT 465
Query: 236 ---------------REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVP 280
EM + C P+VVT N ++ C+ G + EA ++ +M + GC P
Sbjct: 466 GLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTP 525
Query: 281 DVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVW 337
++ITY+ + K E L L ++ +G+ P + TY ++ R + ++
Sbjct: 526 NLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMF 585
Query: 338 KKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+++LG P YN ++ AL + D A + M + G P E L++G
Sbjct: 586 HIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNG--CMPNELTYITLIEG 641
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 145/330 (43%), Gaps = 15/330 (4%)
Query: 56 RMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEY 114
R + +S PN A R+ +R + + EA ++ G +V C L+ LC
Sbjct: 34 RPEAPSASSPNPANARL--RRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRR 91
Query: 115 KHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVV 174
+A + + SG YN ++ G+ + R M V
Sbjct: 92 GRTSDAARVLRAAER----SGTAV--DVFAYNTLVAGYCRYGQLDAARRLIASMP---VA 142
Query: 175 KDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRV 234
D ++Y+ + +C G+ +A+ L +M +G + VV Y ++ AV S G AM V
Sbjct: 143 PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEV 202
Query: 235 YREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
EMR GC P++VT N +I +C GRV +A L + G PD ++Y + L
Sbjct: 203 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCA 262
Query: 295 PR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFA 351
+ ++ LF M+E P T+ ML+R F R G + V ++M GC+ +
Sbjct: 263 AKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTL 322
Query: 352 YNALVDALIDKGMLDMARKYDEEMFAKGLS 381
N +++ + +G +D A ++ M + G S
Sbjct: 323 CNIVINTICKQGRVDDAFQFLNNMGSYGCS 352
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 149/354 (42%), Gaps = 22/354 (6%)
Query: 33 TYNSVIDIL---GKFFE-FDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
TY +I L G+ E L +++HR P+ T+ ++ + + +AM
Sbjct: 147 TYTPIIRGLCDRGRVGEALSLLDDMLHR-----GCQPSVVTYTVLLEAVCKSTGFGQAME 201
Query: 89 TFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
+++ G V+Y +++ +C V +A+E + GF T Y
Sbjct: 202 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF-LNRLSSYGFQP-----DTVSYTT 255
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
+L+G W E + EM ++ + + ++ + + C+ G +A+++ ++M G
Sbjct: 256 VLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG 315
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ N VI + VD A + M GC P ++ TV+K LC R +A
Sbjct: 316 CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAK 375
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKF 324
+L EM +K C P+ +T++ F L + + L ++M E G + TY L+ F
Sbjct: 376 ELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGF 435
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
G + ++ M C P+ Y L+ L + LD A + EM K
Sbjct: 436 CVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQK 486
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 144/348 (41%), Gaps = 45/348 (12%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN+++ ++ + D + LI M P+ T+ + + V EA+ + +
Sbjct: 116 YNTLVAGYCRYGQLDAARRLIASMP----VAPDAYTYTPIIRGLCDRGRVGEALSLLDDM 171
Query: 94 DEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
G + V +Y L++A+C+ +A E+ E + G + YN+I+ G
Sbjct: 172 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEV-LDEMRAKGCTP-----NIVTYNVIINGM 225
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK-LYKEMKKKGIKMD 211
+ REF + G D SY+ + +C + K W+ V+ L+ EM +K +
Sbjct: 226 CREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLC-AAKRWEDVEELFAEMMEKNCMPN 284
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V ++ ++R V+ A++V +M GC + CN VI +C+ GRV +A+ L
Sbjct: 285 EVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLN 344
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
M GC PD I+Y + L + RW +
Sbjct: 345 NMGSYGCSPDTISYTTVLKGLCRAE-----------------------------RWEDAK 375
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ K+M C P+E +N + L KG+++ A E+M G
Sbjct: 376 ELL---KEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 420
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 122/285 (42%), Gaps = 18/285 (6%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWG 159
D +Y LV C Y + A+ L + + Y I+RG G
Sbjct: 112 DVFAYNTLVAGYCRYGQLDAARRL---------IASMPVAPDAYTYTPIIRGLCDRGRVG 162
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+ ++M RG + +Y++ ++ +CKS +A+++ EM+ KG ++V YN +I
Sbjct: 163 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVII 222
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
+ VD A + G QP V+ TV+K LC R + + AEM +K C+
Sbjct: 223 NGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCM 282
Query: 280 PDVITYHCFFR--C----LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
P+ +T+ R C +E+ ++L ++M G +++ + G +
Sbjct: 283 PNEVTFDMLVRFFCRGGMVERAIQVL---EQMSGHGCAANTTLCNIVINTICKQGRVDDA 339
Query: 334 FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
F M GCSPD +Y ++ L + A++ +EM K
Sbjct: 340 FQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK 384
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 109/245 (44%), Gaps = 18/245 (7%)
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++R + ++ G D+ +Y+ + C+ G+ A +L M
Sbjct: 84 LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP--- 140
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ D Y +IR + V A+ + +M GCQPSVVT +++ +C++ +A
Sbjct: 141 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 200
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCL------EKPREILGLFDRMIESGIRPKMDTYVMLL 321
VL EM KGC P+++TY+ + + RE L +R+ G +P +Y +L
Sbjct: 201 EVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL---NRLSSYGFQPDTVSYTTVL 257
Query: 322 RKF---GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+ RW + +F +M E C P+E ++ LV GM++ A + E+M
Sbjct: 258 KGLCAAKRWEDVEELFA---EMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGH 314
Query: 379 GLSAK 383
G +A
Sbjct: 315 GCAAN 319
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 127/307 (41%), Gaps = 18/307 (5%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRM--KDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
T +Y +V+ L + ++ + L+ M K+ P PN TF L+ +A
Sbjct: 355 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCP---PNEVTFNTFICILCQKGLIEQATM 411
Query: 89 TFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
++ E G + + V+Y LV+ C V A EL F + T Y
Sbjct: 412 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALEL---------FYSMPCKPNTITYTT 462
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
+L G E EM ++ ++ ++++ + C+ G +A++L ++M + G
Sbjct: 463 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 522
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+++ YNT++ + + A+ + + G P +VT +++I +L RV EA
Sbjct: 523 CTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI 582
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFD---RMIESGIRPKMDTYVMLLRKF 324
+ + G P + Y+ L K G D M+ +G P TY+ L+
Sbjct: 583 KMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGL 642
Query: 325 GRWGFLR 331
FL+
Sbjct: 643 ANEDFLK 649
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 126/287 (43%), Gaps = 24/287 (8%)
Query: 6 CYANDWKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C A W+ A E V +C T +N+ I IL + + + LI +M ++ +
Sbjct: 366 CRAERWEDAKELLKEMVRKNCPPNEVT--FNTFICILCQKGLIEQATMLIEQMSEHGCEV 423
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELC 124
N T+ + + V+ A+ F + + ++Y L+ LC + + A EL
Sbjct: 424 -NIVTYNALVNGFCVQGRVDSALELFYSMP--CKPNTITYTTLLTGLCNAERLDAAAEL- 479
Query: 125 FGENKNVGFSGLVEM------NKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
L EM +N+++ + + + E E+M + G +L
Sbjct: 480 -----------LAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLI 528
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+Y+ +D + K +A++L + G+ D+V Y+++I + + V+ A++++ +
Sbjct: 529 TYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIV 588
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
+++G +P V N ++ LC+ A A M GC+P+ +TY
Sbjct: 589 QDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTY 635
>gi|356513957|ref|XP_003525674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Glycine max]
Length = 626
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 168/396 (42%), Gaps = 66/396 (16%)
Query: 1 RETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILG--KFFE--FDLSWNLIHR 56
R L C + D L FFNWV+ D + T T Y ++ IL + F +L LI
Sbjct: 91 RILLRCQS-DHSSVLTFFNWVKNDLNITPTLHNYCVIVHILAWSRVFSHAMNLLSELIQL 149
Query: 57 MKDNPSSIP------------------NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL 98
++ +P N A F ++ K YV A +V + + TF + E
Sbjct: 150 VEVEGVCVPPNDGIYENLVECTEDCNWNPAIFDMLIKAYVKAGMVEKGLATFRRNIEACF 209
Query: 99 KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWW 158
V CN +L G + ++
Sbjct: 210 IPNVIACNC----------------------------------------LLSGLSRFNYI 229
Query: 159 GKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTV 218
G+C +EEM + G+ ++ ++++I ++CK G K + +M+++G + D+V YNT+
Sbjct: 230 GQCWAVYEEMGRLGIHRNAYTFNIMTHVLCKDGDTDKVTRFLDKMEEEGFEPDLVTYNTL 289
Query: 219 IRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGC 278
+ + ++ A +Y+ M G P+++T ++ LCE G+V+EA+ + +M +G
Sbjct: 290 VNSYCKKRRLEDAFYLYKIMYIRGVMPNLITHTVLMNGLCEEGKVKEAHQLFHQMVHRGI 349
Query: 279 VPDVITYHCFFR--CLEKPREIL-GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFV 335
PDV++Y+ C E ++ L MI +GI P T +++ F R G L
Sbjct: 350 DPDVVSYNTLVSGYCREGKMQMCRSLLHEMIGNGICPDSVTCRLIVEGFARDGKLLSALN 409
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
+++ E Y+ L+ AL +G AR +
Sbjct: 410 TVVELKRFRIKIPEDLYDYLIVALCIEGRPFAARSF 445
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 147/336 (43%), Gaps = 13/336 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N + +L K + D + +M++ P+ T+ + Y + +A +
Sbjct: 250 TFNIMTHVLCKDGDTDKVTRFLDKMEEEGFE-PDLVTYNTLVNSYCKKRRLEDAFYLYKI 308
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G + + +++ L++ LCE V EA +L F + + G V YN ++ G
Sbjct: 309 MYIRGVMPNLITHTVLMNGLCEEGKVKEAHQL-FHQMVHRGIDPDVVS-----YNTLVSG 362
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + CR EM G+ D + + ++ + GK A+ E+K+ IK+
Sbjct: 363 YCREGKMQMCRSLLHEMIGNGICPDSVTCRLIVEGFARDGKLLSALNTVVELKRFRIKIP 422
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYR-EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
Y+ +I A+ + EG FA R + + + G P + T N +++ LC+ V EA +
Sbjct: 423 EDLYDYLIVALCI-EGRPFAARSFLLRISQDGYMPKINTYNKLVESLCKFNNVEEALILK 481
Query: 271 AEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
+EM K+ + +++ Y CL + E GL + M+ SGI P ++ L+ +
Sbjct: 482 SEMVKRSMILNLVAYRAVISCLCRVNRTLEAEGLLEEMVSSGILPDVEISRALINGYCEE 541
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
+ + K D +YNA+V D G
Sbjct: 542 NKVDKAVSLLKFFANEFQVYDTESYNAVVKVFCDVG 577
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 3/195 (1%)
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
K+G K + ++ + +V+A N ++ + + VY EM +G +
Sbjct: 190 KAGMVEKGLATFRRNIEACFIPNVIACNCLLSGLSRFNYIGQCWAVYEEMGRLGIHRNAY 249
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRM 305
T N + +LC++G + L +M ++G PD++TY+ K R + L+ M
Sbjct: 250 TFNIMTHVLCKDGDTDKVTRFLDKMEEEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIM 309
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
G+ P + T+ +L+ G ++ ++ +M G PD +YN LV +G +
Sbjct: 310 YIRGVMPNLITHTVLMNGLCEEGKVKEAHQLFHQMVHRGIDPDVVSYNTLVSGYCREGKM 369
Query: 366 DMARKYDEEMFAKGL 380
M R EM G+
Sbjct: 370 QMCRSLLHEMIGNGI 384
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 117/273 (42%), Gaps = 12/273 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+YN+++ + + + +L+H M N P+ T R++ + + + A+ T +
Sbjct: 355 SYNTLVSGYCREGKMQMCRSLLHEMIGN-GICPDSVTCRLIVEGFARDGKLLSALNTVVE 413
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
L F +K E Y L+ ALC A+ +++ G+ M K YN ++
Sbjct: 414 LKRFRIKIPEDLYDYLIVALCIEGRPFAARSFLLRISQD-GY-----MPKINTYNKLVES 467
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + + EM KR ++ +L +Y + +C+ + +A L +EM GI D
Sbjct: 468 LCKFNNVEEALILKSEMVKRSMILNLVAYRAVISCLCRVNRTLEAEGLLEEMVSSGILPD 527
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V +I VD A+ + + + N V+K+ C+ G V E +
Sbjct: 528 VEISRALINGYCEENKVDKAVSLLKFFANEFQVYDTESYNAVVKVFCDVGNVAELLELQD 587
Query: 272 EMPKKGCVPDVIT----YHCFFRCLEKPREILG 300
++ K G V + +T H + +E+ E+LG
Sbjct: 588 KLLKVGYVSNRLTCKYVIHGLQKAMEQDDEMLG 620
>gi|356506754|ref|XP_003522141.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Glycine max]
Length = 258
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 126/247 (51%), Gaps = 19/247 (7%)
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
K++N+IL GW + K + W ++ D+ +Y+ ++ + K GKP
Sbjct: 2 KMWNVILNGWCVLGNSHKAKRVWRDIVASPCKPDIFTYATFIKALTKGGKP--------- 52
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
DVV N +I A+ + + A++++ +M E GC+P+V T N +IK +C R
Sbjct: 53 --------DVVICNCIIDALCFKKRIPEALKIFCDMSERGCEPNVATYNFLIKYMCNIQR 104
Query: 263 VREAYAVLAEMPKK--GCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVML 320
+ + Y ++ EM +K C+P+ +TY + L++ ++ + +RM +G D Y M+
Sbjct: 105 MEKVYELVDEMERKKGSCLPNAVTYCYLLKSLKESGKVCRVLERMERNGCGMNGDVYNMV 164
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
L + +W V W++ME G P+ +Y ++ +KG + A +Y EEM +KG+
Sbjct: 165 LSLYMKWDDGDGVRKTWEEMERNGWGPNRRSYTIMIHENFEKGRVKDAVRYLEEMISKGM 224
Query: 381 SAKPREE 387
+PR +
Sbjct: 225 VLEPRTD 231
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 12/195 (6%)
Query: 88 GTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYN 146
TF K G K +V CN ++DALC K + EA ++ F + G V YN
Sbjct: 40 ATFIKALTKGGKPDVVICNCIIDALCFKKRIPEALKI-FCDMSERGCEPNVA-----TYN 93
Query: 147 MILRGWFKMSWWGKCREFWEEMDKR--GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+++ + K E +EM+++ + + +Y + + +SG K ++ + M+
Sbjct: 94 FLIKYMCNIQRMEKVYELVDEMERKKGSCLPNAVTYCYLLKSLKESG---KVCRVLERME 150
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+ G M+ YN V+ + D + + EM G P+ + +I E GRV+
Sbjct: 151 RNGCGMNGDVYNMVLSLYMKWDDGDGVRKTWEEMERNGWGPNRRSYTIMIHENFEKGRVK 210
Query: 265 EAYAVLAEMPKKGCV 279
+A L EM KG V
Sbjct: 211 DAVRYLEEMISKGMV 225
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 186/436 (42%), Gaps = 76/436 (17%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSI--PNHATFRIM 73
FF W + F H T T NS++++ F D +R+ KD ++ P+ T+ +
Sbjct: 3 FFQWAKARPGFQHNTYTCNSLLEV----FVNDGCHREAYRVFKDELVTLFRPDDFTYGTL 58
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKN-- 130
+ + A + +A+ ++ G+ V++ +L+ LCE +A ++ F + +
Sbjct: 59 IRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQI-FHQMIDMK 117
Query: 131 ---------VGFSGLVEMNKTKI-------------------YNMILRGWFKMSWWGKCR 162
V L ++NK + Y +++ FK W +
Sbjct: 118 VKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGH 177
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK------------- 209
+ +EEM +G +L +Y+ ++ CK+G+ +A+ L + +K G
Sbjct: 178 QIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGL 237
Query: 210 --------------------MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
DV+ Y + I + + +D A V+ +M E GC P V+
Sbjct: 238 CKHDRHDEARELFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVS 297
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMI 306
N +I LC++ RV EA ++ + ++ C+P V L K R E + +RM+
Sbjct: 298 YNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERML 357
Query: 307 ESGIR-PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
E+G R P + TY ++ + L +VV +KM GC PD Y A++DA G L
Sbjct: 358 ETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRL 417
Query: 366 DMARKYDEEMFAKGLS 381
D AR+ + M +G +
Sbjct: 418 DEARELFQRMHERGCA 433
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 167/381 (43%), Gaps = 15/381 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C N +AL+ F+ + D Y VI L K + DL+ + RM + +P
Sbjct: 98 CELNFTDKALQIFHQM-IDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQS-GCLP 155
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELC 124
+ T+ ++ A + F ++ G E V+Y +V+ C+ + +A L
Sbjct: 156 DKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSL- 214
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
K G S +Y+ ++ G K + RE +E G V+D+ Y+ ++
Sbjct: 215 MRRLKGTGRS-----PSGSLYSTLIDGLCKHDRHDEARELFEM--AAGDVQDVIVYTSFI 267
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+CK+GK +A ++ +M + G D V+YN +I ++ V A + + E C
Sbjct: 268 SGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCM 327
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGC-VPDVITYHCFFRCLEKPREI---LG 300
P V C ++ LC++ RV EA +L M + G P V+TY L K +
Sbjct: 328 PGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYV 387
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+ +M +G P + TY ++ F + G L ++++M E GC+ D AYN L+
Sbjct: 388 VLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYC 447
Query: 361 DKGMLDMARKYDEEMFAKGLS 381
+D A EEM +G+
Sbjct: 448 RAAKVDEAIAMIEEMAGRGIQ 468
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 118/273 (43%), Gaps = 18/273 (6%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + A E F D Y S I L K + D +H P
Sbjct: 238 CKHDRHDEARELFEMAAGD---VQDVIVYTSFISGLCKAGKLD-EAKAVHVKMIEAGCAP 293
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELC 124
+ ++ ++ + V+EA ++ E V C LVD LC+ + V EA
Sbjct: 294 DPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEA---- 349
Query: 125 FGENKNVGFSGLVEMN----KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
V ++E Y+ ++ G K ++M + G V D+ +Y
Sbjct: 350 -----CVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTY 404
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ +D CK G+ +A +L++ M ++G +DVVAYN +IR + VD A+ + EM
Sbjct: 405 TAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAG 464
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
G QP+VV+ +T++ LC+ RV EA ++ +M
Sbjct: 465 RGIQPNVVSLSTIVDGLCKESRVEEARLLMEKM 497
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 114/253 (45%), Gaps = 11/253 (4%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
Y+++ID L K D + L + + + +F A ++EA K+
Sbjct: 230 YSTLIDGLCKHDRHDEARELFEMAAGDVQDVIVYTSF---ISGLCKAGKLDEAKAVHVKM 286
Query: 94 DEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
E G D VSY ++ +LC+ V EA+EL + G+ + +++ G
Sbjct: 287 IEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGV------PVCTVLVDGL 340
Query: 153 FKMSWWGKCREFWEEMDKRG-VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + E M + G + +YS +D +CK+ + A + ++M++ G D
Sbjct: 341 CKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPD 400
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
VV Y +I A +D A +++ M E GC VV N +I+ C +V EA A++
Sbjct: 401 VVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIE 460
Query: 272 EMPKKGCVPDVIT 284
EM +G P+V++
Sbjct: 461 EMAGRGIQPNVVS 473
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 97/246 (39%), Gaps = 11/246 (4%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y ++RG+ K + EM G+ + ++ + +C+ KA++++ +M
Sbjct: 55 YGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMI 114
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+K D Y VI + +D A + M + GC P VT ++ L + +
Sbjct: 115 DMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWE 174
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVML- 320
+ + + EM KG P+++TY K I L L R+ +G P Y L
Sbjct: 175 QGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLI 234
Query: 321 --LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
L K R R +F + G D Y + + L G LD A+ +M
Sbjct: 235 DGLCKHDRHDEARELFEMAA-----GDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEA 289
Query: 379 GLSAKP 384
G + P
Sbjct: 290 GCAPDP 295
>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 452
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 154/319 (48%), Gaps = 22/319 (6%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQEL 123
P+ T+ + + + EA+G FN++ +K ++ N LVD LC+ + +A+ +
Sbjct: 152 PDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNV 211
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
K ++ YN ++ G+F + K + M +RGV D+HSYS+
Sbjct: 212 LAVMIKQSVDPDVIT------YNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVM 265
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
++ +CK+ +AV L KEM K + + V Y+++I + S + A + EM G
Sbjct: 266 INGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQ 325
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFD 303
V+T N+++ LC+N +V +A +L ++ +G PD+ TY L D
Sbjct: 326 PADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTI-------------LVD 372
Query: 304 RMIESG-IRPKMDTY-VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
+ ++G ++ + Y ++L++ + + KME+ GC+P+ + L+ AL +
Sbjct: 373 GLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRALFE 432
Query: 362 KGMLDMARKYDEEMFAKGL 380
M D A + EM A+GL
Sbjct: 433 NDMNDKAVELLREMIARGL 451
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 113/220 (51%), Gaps = 9/220 (4%)
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG------KPWKAVKLYK 201
I K++ + +M+ RG+ DL + +I ++ C G K + + +
Sbjct: 14 IFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKVKETLHFHD 73
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
++ KG +++ V+Y T+I + + AM+V R + + QP+VV +T+I LC++
Sbjct: 74 DVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDK 133
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCF-FRCL--EKPREILGLFDRMIESGIRPKMDTYV 318
V +A+ + ++M K PDVITY+ + CL + +E +GLF++M+ I+P + T+
Sbjct: 134 LVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFN 193
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+L+ + G ++ V M + PD YN+L+D
Sbjct: 194 ILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDG 233
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 110/241 (45%), Gaps = 3/241 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y ++ G K + +D V ++ YS + +CK A LY +M
Sbjct: 87 YGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQML 146
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K I DV+ YNT++ + + A+ ++ +M +P + T N ++ LC+ G ++
Sbjct: 147 LKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMK 206
Query: 265 EAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLL 321
+A VLA M K+ PDVITY+ + +++ + +F+ M G+ P + +Y +++
Sbjct: 207 KARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMI 266
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ + + K+M +P+ Y++L+D L G + A EM +G
Sbjct: 267 NGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQP 326
Query: 382 A 382
A
Sbjct: 327 A 327
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 114/239 (47%), Gaps = 11/239 (4%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
F +++ +G + SY +D +CK+G+ A+++ + + ++ +VV Y+T+I ++
Sbjct: 70 HFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSL 129
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
+ V A +Y +M P V+T NT++ GR++EA + +M K PD+
Sbjct: 130 CKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDI 189
Query: 283 ITYHCFFRCL------EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVV 336
T++ L +K R +L + MI+ + P + TY L+ + V
Sbjct: 190 YTFNILVDGLCKEGEMKKARNVLAV---MIKQSVDPDVITYNSLMDGYFLVKQENKATFV 246
Query: 337 WKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+ M G +PD +Y+ +++ L M+D A +EM +K ++ P + L+ G
Sbjct: 247 FNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMA--PNTVTYSSLIDG 303
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 88/185 (47%), Gaps = 34/185 (18%)
Query: 31 TDTYNSVIDIL---GKFFEFDLSWNLIHRMKD--NPSSIPNHATFRIMFKRYVTAHLVNE 85
T TY+S+ID L G+ F+ +W+L++ M + P+ + T+ + H V++
Sbjct: 294 TVTYSSLIDGLHKSGRIFD---AWDLVNEMHNRGQPADV---ITYNSLLDALCKNHQVDK 347
Query: 86 AMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI 144
A+ K+ + G++ ++ +Y LVD LC+ + +AQE +
Sbjct: 348 AITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQE---------------------V 386
Query: 145 YNMIL-RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
Y ++L +G+ S + K +M+ G + ++ I + + ++ KAV+L +EM
Sbjct: 387 YQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREM 446
Query: 204 KKKGI 208
+G+
Sbjct: 447 IARGL 451
>gi|242041823|ref|XP_002468306.1| hypothetical protein SORBIDRAFT_01g043390 [Sorghum bicolor]
gi|241922160|gb|EER95304.1| hypothetical protein SORBIDRAFT_01g043390 [Sorghum bicolor]
Length = 519
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 153/340 (45%), Gaps = 21/340 (6%)
Query: 35 NSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLD 94
++ + +LG+ F W+L+ + T I+ R V+E + +F +L
Sbjct: 114 DTALYVLGRARRFPHMWDLLATTRRICPDAVTSRTAMIVLGRVAKVCSVHETVASFRRL- 172
Query: 95 EFGLKDEVSYCNLVDALCEYKHVIEA--QELCFGENKNVGFSGL---VEMNKTKIYNMIL 149
+ VD C + ++ QE + +NV F L +N+ +N++L
Sbjct: 173 -------ARMFHAVDPACLFNALLRTLCQEKSMSDARNV-FHALKYDFRVNR-HTFNILL 223
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
GW F EM + GV DL +Y+ +D CK+ KA KL EM++K I
Sbjct: 224 SGWKSAE---DAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRDVEKAYKLLDEMREKDIS 280
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
D++ Y ++I +G+ D A + +EM E+GC P V N I+ R+ +A+A+
Sbjct: 281 PDIITYTSLIGGLGLIGQPDKARDLLKEMHELGCSPDVPAYNAAIRNFVIAKRLGDAFAL 340
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGR 326
+ +M KG +P+ TY+ FFRC +I L++RM G P + + ++R R
Sbjct: 341 MDQMASKGLMPNPTTYNLFFRCYYWAFDIGSTWRLYERMRSEGCFPNTQSCMFIIRLCHR 400
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
+G + +W M + L D L D+G L+
Sbjct: 401 YGKVGQALELWSDMVSNRFGSFTLVSDVLFDLLCDEGKLE 440
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
+A A +AEM + G PD++TY+ C K R++ L D M E I P + TY L+
Sbjct: 231 DAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRDVEKAYKLLDEMREKDISPDIITYTSLI 290
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G G + K+M ELGCSPD AYNA + + L A ++M +KGL
Sbjct: 291 GGLGLIGQPDKARDLLKEMHELGCSPDVPAYNAAIRNFVIAKRLGDAFALMDQMASKGLM 350
Query: 382 AKP 384
P
Sbjct: 351 PNP 353
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 122/317 (38%), Gaps = 66/317 (20%)
Query: 11 WKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
++R F+ V+ C F N+++ L + + N+ H +K + N TF
Sbjct: 169 FRRLARMFHAVDPACLF-------NALLRTLCQEKSMSDARNVFHALKYDFRV--NRHTF 219
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENK 129
I+ + +A +A ++ E G++ D V+Y +L+D C+ + V +A +L
Sbjct: 220 NILLSGWKSAE---DAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRDVEKAYKL------ 270
Query: 130 NVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
L EM + I Y ++ G + K R+ +EM + G D+ +Y+
Sbjct: 271 ------LDEMREKDISPDIITYTSLIGGLGLIGQPDKARDLLKEMHELGCSPDVPAYNAA 324
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ + + A L +M KG+ + YN R + + R+Y MR GC
Sbjct: 325 IRNFVIAKRLGDAFALMDQMASKGLMPNPTTYNLFFRCYYWAFDIGSTWRLYERMRSEGC 384
Query: 244 QPSVVTCNTVIKL-----------------------------------LCENGRVREAYA 268
P+ +C +I+L LC+ G++ E
Sbjct: 385 FPNTQSCMFIIRLCHRYGKVGQALELWSDMVSNRFGSFTLVSDVLFDLLCDEGKLEEVER 444
Query: 269 VLAEMPKKGCVPDVITY 285
+M + G P + +
Sbjct: 445 CFCQMVEFGQKPSNVAF 461
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 166/371 (44%), Gaps = 18/371 (4%)
Query: 3 TLSCYANDW---KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLS--WNLIHRM 57
TLS N + KR + V+ + DT I G F S L+ RM
Sbjct: 157 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 216
Query: 58 KDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKH 116
PN T+ ++ ++ A NK++ ++ + V Y ++D+LC+Y+H
Sbjct: 217 VQRGCQ-PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 275
Query: 117 VIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
+A L F E +N G V Y+ ++ W +M +R + +
Sbjct: 276 EDDALNL-FTEMENKGVRPNV-----ITYSSLISCLCNYERWSDASRLLSDMIERKINPN 329
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
+ +++ +D K GK +A KLY EM K+ I D+ Y+++I + + +D A ++
Sbjct: 330 VVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 389
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY----HCFFRCL 292
M C P+VVT NT+I C+ R+ E + EM ++G V + +TY H FF+
Sbjct: 390 LMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQAR 449
Query: 293 EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
+ + +F +M+ G+ P + TY LL + G L VV++ ++ P + Y
Sbjct: 450 DCDNAQM-VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 508
Query: 353 NALVDALIDKG 363
N +++ + G
Sbjct: 509 NIMIEGMCKAG 519
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 164/354 (46%), Gaps = 17/354 (4%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
+N ++ + K +FDL +L +M+ S N T+ I+ + ++ A+ K+
Sbjct: 88 FNKLLSAIAKMKKFDLVISLGEKMQRLGIS-HNLYTYNILINCFCRRSQISLALALLGKM 146
Query: 94 DEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIYNMIL 149
+ G + V+ +L++ C K + +A L +VEM T + ++
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVAL---------VDQMVEMGYRPDTITFTTLI 197
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G F + + + M +RG +L +Y + ++ +CK G A L +M+ I+
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 257
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
+VV Y+TVI ++ D A+ ++ EM G +P+V+T +++I LC R +A +
Sbjct: 258 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRL 317
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGR 326
L++M ++ P+V+T++ K +++ L+D MI+ I P + TY L+ F
Sbjct: 318 LSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 377
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
L +++ M C P+ YN L++ +D + EM +GL
Sbjct: 378 HDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL 431
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 108/239 (45%), Gaps = 3/239 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y ILR + M K + + ++ + + K K + L ++M+
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+ GI ++ YN +I + A+ + +M ++G +PS+VT ++++ C R+
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLL 321
+A A++ +M + G PD IT+ L K E + L DRM++ G +P + TY +++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ G + F + KME + Y+ ++D+L D A EM KG+
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 291
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 136/288 (47%), Gaps = 11/288 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+S+I L + + + L+ M + + PN TF + +V + EA +++
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKIN-PNVVTFNALIDAFVKEGKLVEAEKLYDE 355
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + + ++ +Y +L++ C + + EA+ + F +V YN ++ G
Sbjct: 356 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT------YNTLING 409
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K + E + EM +RG+V + +Y+ + ++ A ++K+M G+ +
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPN 469
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
++ YNT++ + + ++ AM V+ ++ +P++ T N +I+ +C+ G+V + + +
Sbjct: 470 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 529
Query: 272 EMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDT 316
+ KG PDVI Y+ + E LF +M E G P T
Sbjct: 530 SLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 100/233 (42%), Gaps = 18/233 (7%)
Query: 155 MSWWGKCREFWE-EMDKRGVVKD-LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
M +WG R F D R ++++ LHS K A+ L+ M K +
Sbjct: 39 MCYWG--RAFSSGSGDYREILRNGLHSM-----------KLDDAIGLFGGMVKSRPLPSI 85
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
+N ++ A+ + D + + +M+ +G ++ T N +I C ++ A A+L +
Sbjct: 86 FEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGK 145
Query: 273 MPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M K G P ++T ++ + + L D+M+E G RP T+ L+
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ +M + GC P+ Y +V+ L +G +D+A +M A + A
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 258
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 156/336 (46%), Gaps = 15/336 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N +ID L K + L++ M PN T+ I+ + + EA N
Sbjct: 379 TFNIMIDGLVKKGYLVSALELLNEMVAKRFE-PNVITYTILINGFCKQGRLEEAAEIVNS 437
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY--NMIL 149
+ GL + V Y L+ ALC+ ++ EA +L FGE G K IY N ++
Sbjct: 438 MSAKGLSLNTVGYNCLICALCKDGNIEEALQL-FGEMSGKGC-------KPDIYTFNSLI 489
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G K + + +M GV+ + +Y+ + +A KL EM +G
Sbjct: 490 NGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCP 549
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
+D + YN +I+A+ + V+ + ++ EM G P++++CN +I LC G+V +A
Sbjct: 550 LDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKF 609
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
L +M +G PD++TY+ L K +E LF+++ GIRP TY L+ +
Sbjct: 610 LQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCH 669
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
G ++ K + G P+E ++ L++ ++ K
Sbjct: 670 EGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVKK 705
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 157/343 (45%), Gaps = 10/343 (2%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T YN++I F+ + +L++ P+ TF IM V + A+
Sbjct: 340 NTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALEL 399
Query: 90 FNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
N++ + V +Y L++ C+ + EA E+ ++ GL +N T YN +
Sbjct: 400 LNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIV----NSMSAKGL-SLN-TVGYNCL 453
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ K + + + EM +G D+++++ ++ +CK+ K +A+ LY +M +G+
Sbjct: 454 ICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGV 513
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ V YNT++ A + + + A ++ EM GC +T N +IK LC+ G V +
Sbjct: 514 IANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLG 573
Query: 269 VLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ EM KG P +I+ + L K + L MI G+ P + TY L+
Sbjct: 574 LFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLC 633
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
+ G ++ ++ K++ G PD YN L+ +GM + A
Sbjct: 634 KMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDA 676
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 167/359 (46%), Gaps = 16/359 (4%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F+ TY ++ L + + D + L++++ + PN + + YV + EA
Sbjct: 306 FSTDALTYGYLMHGLCRMGQVDEARALLNKIPN-----PNTVLYNTLISGYVASGRFEEA 360
Query: 87 MGT-FNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI 144
+N + G + D ++ ++D L + +++ A EL N + E N
Sbjct: 361 KDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELL-----NEMVAKRFEPNVIT- 414
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y +++ G+ K + E M +G+ + Y+ + +CK G +A++L+ EM
Sbjct: 415 YTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMS 474
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
KG K D+ +N++I + + ++ A+ +Y +M G + VT NT++ ++
Sbjct: 475 GKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQ 534
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
+A+ ++ EM +GC D ITY+ + L K + LGLF+ M+ GI P + + +L+
Sbjct: 535 QAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILI 594
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
R G + + M G +PD YN+L++ L G + A ++ ++G+
Sbjct: 595 SGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGI 653
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 150/373 (40%), Gaps = 48/373 (12%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D ++E F ++HT D +ID LG +F + L+ +MKD + +
Sbjct: 78 DIPTSMELFQRAGAQKGYSHTFDACYLLIDKLGAVGDFKVIEKLLKQMKDE-GLLFKESL 136
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENK 129
F ++ K Y A L +A T LD +G V C+
Sbjct: 137 FILIMKHYGKAGLPGQA--TRLLLDMWG----VYSCD----------------------- 167
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
K YN++L + +M RGV ++++ + M +C
Sbjct: 168 ----------PTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCM 217
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
+ A L ++M K G + V Y T+I A+ + V A+++ +M M C+P V T
Sbjct: 218 VSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQT 277
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDR---MI 306
N VI LC GR+ EA +L M +G D +TY L + +G D ++
Sbjct: 278 FNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCR----MGQVDEARALL 333
Query: 307 ESGIRPKMDTYVMLLRKFGRWG-FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
P Y L+ + G F +++ M G PD + +N ++D L+ KG L
Sbjct: 334 NKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYL 393
Query: 366 DMARKYDEEMFAK 378
A + EM AK
Sbjct: 394 VSALELLNEMVAK 406
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 154/362 (42%), Gaps = 22/362 (6%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T +YN V+DIL ++ N+ + M S P TF ++ K V+ A
Sbjct: 169 TFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVS-PTVYTFGVVMKALCMVSEVDSACSL 227
Query: 90 FNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
+ + G + + V Y L+ ALCE V EA +L E+ F E + + +N +
Sbjct: 228 LRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLL--EDM---FLMCCEPD-VQTFNDV 281
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G + + + + M RG D +Y M +C+ G+ +A L ++
Sbjct: 282 IHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNP-- 339
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRV-YREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ V YNT+I S + A + Y M G +P T N +I L + G + A
Sbjct: 340 --NTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSAL 397
Query: 268 AVLAEMPKKGCVPDVITYHCFFR--C----LEKPREILGLFDRMIESGIRPKMDTYVMLL 321
+L EM K P+VITY C LE+ EI+ + M G+ Y L+
Sbjct: 398 ELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIV---NSMSAKGLSLNTVGYNCLI 454
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ G + ++ +M GC PD + +N+L++ L ++ A +MF +G+
Sbjct: 455 CALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVI 514
Query: 382 AK 383
A
Sbjct: 515 AN 516
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 164/342 (47%), Gaps = 11/342 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY ++ID + +F ++ L M + P + I+ + ++EA F
Sbjct: 195 TYGTLIDGCCRQGDFLKAFRLFDEMIEK-KIFPTVVIYTILIRGLCGESRISEAESMFRT 253
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G L + +Y ++D C+ HV +A EL + E G + + +++ G
Sbjct: 254 MRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL-YQEMLGDGL-----LPNVVTFGILIDG 307
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K R+F +M GVV ++ Y+ +D CK+G +A+ L+ E++K I D
Sbjct: 308 LCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPD 367
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V Y+ +I+ + + ++ A + +EM++ G P+ VT NT+I C+ G + +A V +
Sbjct: 368 VFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCS 427
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+M +KG P++IT+ K ++ +GL+ M+ G+ P + Y L+ + G
Sbjct: 428 QMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDG 487
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
+ F + K+M+E G P+ F + L+D L G + A K
Sbjct: 488 NTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIK 529
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 161/350 (46%), Gaps = 11/350 (3%)
Query: 35 NSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLD 94
N V+D L K FD W + M +S PN T+ + +A F+++
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGAS-PNVVTYGTLIDGCCRQGDFLKAFRLFDEMI 220
Query: 95 EFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWF 153
E + V Y L+ LC + EA+ + F +N G + YN ++ G+
Sbjct: 221 EKKIFPTVVIYTILIRGLCGESRISEAESM-FRTMRNSGM-----LPNLYTYNTMMDGYC 274
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
K++ K E ++EM G++ ++ ++ I +D +CK+ + A K +M G+ ++
Sbjct: 275 KIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
YN +I + + A+ ++ E+ + P V T + +IK LC R+ EA +L EM
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394
Query: 274 PKKGCVPDVITYHCFFR--CLEKPRE-ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
KKG +P+ +TY+ C E E + + +M E GI P + T+ L+ + + G +
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
++ +M G PD AY AL+D G A + +EM GL
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGL 504
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 7/179 (3%)
Query: 209 KMDVV----AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
KMDV+ A N V+ + D +VY +M G P+VVT T+I C G
Sbjct: 151 KMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLL 321
+A+ + EM +K P V+ Y R L + E +F M SG+ P + TY ++
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + ++ ++++M G P+ + L+D L + ARK+ +M + G+
Sbjct: 271 DGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGV 329
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 94/209 (44%), Gaps = 20/209 (9%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN +ID K + +L H + +P+ T+ I+ K + EA G ++
Sbjct: 336 YNCLIDGYCKAGNLSEALSL-HSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394
Query: 94 DEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFG------ENKNVGFSGLVEMNKTKIYN 146
+ G L + V+Y L+D C+ ++ +A E+C E + FS L++
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLID-------- 446
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
G+ K + EM +G++ D+ +Y+ +D K G +A +L+KEM++
Sbjct: 447 ----GYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEA 502
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
G+ +V + +I + + A++++
Sbjct: 503 GLHPNVFTLSCLIDGLCKDGRISDAIKLF 531
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 150/316 (47%), Gaps = 10/316 (3%)
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGEN 128
F I+ + V+ A K+ + G + D V++ +L++ LC A E F E
Sbjct: 122 FNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEF-FDEM 180
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
G+ YN I++G+ K+ ++MDK G D+ Y+ +D +C
Sbjct: 181 VASGYQP-----NLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLC 235
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
K +A+ ++ E+K KG++ DV Y+ ++ + S+ + A ++ EM + P VV
Sbjct: 236 KDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVV 295
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRM 305
T N ++ LC+ G + EA ++ M +KG P+ TY+ CL+ K E +FD M
Sbjct: 296 TFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAM 355
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
I G P + +Y +L+ + + + ++ +M G P+ F YN L+ L G
Sbjct: 356 ITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRH 415
Query: 366 DMARKYDEEMFAKGLS 381
AR+ ++M A+G S
Sbjct: 416 CEARELFKDMQAQGCS 431
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 140/303 (46%), Gaps = 10/303 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PN T+ + K + A+G K+D+ G + D V Y ++D LC+ + V EA ++
Sbjct: 187 PNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDI 246
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F E K G V Y++++ G + + EM ++ D+ +++I
Sbjct: 247 -FSEIKGKGVRPDVF-----TYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNIL 300
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D +CK G +A + K M +KG++ + YN+++ + V A V+ M GC
Sbjct: 301 VDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGC 360
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILG 300
P+VV+ N +I C+ R+ EA + EM +G +P+ Y+ L + E
Sbjct: 361 MPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARE 420
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
LF M G P + T +LL + G+L +++ M++ P+ Y+ L+ A+
Sbjct: 421 LFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMY 480
Query: 361 DKG 363
G
Sbjct: 481 KSG 483
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 154/327 (47%), Gaps = 12/327 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C+ + + RA+EFF+ + + TYN++I K + ++ L+ +M D P
Sbjct: 165 CFEDKFARAMEFFDEMVAS-GYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKM-DKAGGRP 222
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELC 124
+ + + LV+EA+ F+++ G++ +V +Y L+ LC EA L
Sbjct: 223 DIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASAL- 281
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F E ++ M +N+++ K + + + M ++GV + +Y+ M
Sbjct: 282 FNEMMSLNI-----MPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLM 336
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ C K ++A ++ M KG +VV+YN +I ++ +D A ++ EM G
Sbjct: 337 NGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLI 396
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGL 301
P+ NT+I LC+ GR EA + +M +GC PD++T L K + L L
Sbjct: 397 PNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRL 456
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWG 328
F M +S ++P + TY +L+R + G
Sbjct: 457 FRAMQDSCLKPNLVTYDILIRAMYKSG 483
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 127/281 (45%), Gaps = 19/281 (6%)
Query: 103 SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCR 162
S N+ DAL + H+I L +VE +K +L ++ +G
Sbjct: 61 SLTNIEDALFSFNHMIHKHPL----------PCIVEFDK------LLSALVRIKHYGTVL 104
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+ ++ + +D+ ++I ++ + + A + ++ K G + D V ++++I +
Sbjct: 105 SLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGL 164
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
+ AM + EM G QP++ T NT+IK C+ G+ A +L +M K G PD+
Sbjct: 165 CFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDI 224
Query: 283 ITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
+ Y+ L K R E L +F + G+RP + TY +L+ ++ +
Sbjct: 225 VIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNE 284
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
M L PD +N LVD L +GML A+ + M KG+
Sbjct: 285 MMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGV 325
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 111/204 (54%), Gaps = 13/204 (6%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+P+ TF I+ + +++EA G + E G++ + +Y +L++ C V EA+
Sbjct: 291 MPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARM 350
Query: 123 LCFGENKNVGFSGLVE---MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
+ F ++ M YN+++ G+ K + RE ++EM RG++ + +
Sbjct: 351 V---------FDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFN 401
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y+ + +C++G+ +A +L+K+M+ +G D+V ++ ++ +D A+R++R M+
Sbjct: 402 YNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQ 461
Query: 240 EMGCQPSVVTCNTVIKLLCENGRV 263
+ +P++VT + +I+ + ++G++
Sbjct: 462 DSCLKPNLVTYDILIRAMYKSGKI 485
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 160/355 (45%), Gaps = 14/355 (3%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
+T+N I L K + L+ RM + PN T+ ++ V+EA
Sbjct: 287 VNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFT-PNSFTYGVLMHGLCRMGKVDEARMLL 345
Query: 91 NKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
NK+ + V + L++ + EA+ + +VG YN ++
Sbjct: 346 NKVPN---PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGP-----DIFTYNTLIL 397
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
G K + RE EM +G ++ +Y+I +D CK G+ +A + EM KG+ +
Sbjct: 398 GLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLAL 457
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
+ V YN +I A+ E V A+ ++ +M GC+P + T N++I LC+ + EA +
Sbjct: 458 NAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLY 517
Query: 271 AEMPKKGCVPDVITY----HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
+M +G + + ITY H F R +E L L + M+ G TY L++ R
Sbjct: 518 QDMLLEGVIANTITYNTLIHAFLR-RGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCR 576
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G + +++ M G +P+ + N L++ L G + A ++ +M +GL+
Sbjct: 577 AGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLT 631
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 160/335 (47%), Gaps = 11/335 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++I L K + L++ M+ PN T+ I+ R+ + EA ++
Sbjct: 391 TYNTLILGLCKKGYLVSARELMNEMQIKGCE-PNVITYTILIDRFCKEGRLEEARNVLDE 449
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ GL + V Y L+ ALC+ + V +A + FG+ + G +N ++ G
Sbjct: 450 MSGKGLALNAVGYNCLISALCKDEKVQDALNM-FGDMSSKGCKP-----DIFTFNSLIFG 503
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K++ + + +++M GV+ + +Y+ + + G +A+KL +M +G +D
Sbjct: 504 LCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLD 563
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ YN +I+A+ + ++ + ++ +M G P+ ++CN +I LC G ++ A L
Sbjct: 564 DITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLR 623
Query: 272 EMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+M +G PD++TY+ L K +E L LFD++ GI P TY L+ + G
Sbjct: 624 DMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEG 683
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
++ + + G P+E + LV I +G
Sbjct: 684 MFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 718
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 119/277 (42%), Gaps = 40/277 (14%)
Query: 141 KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVK---DLHSYSIYMDIMCKSGKPWKAV 197
+ ++ +I++ + + G+ +D RGV SY++ +D++ P
Sbjct: 145 RESLFILIMKHYGRAGLPGQATRLL--LDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVP 202
Query: 198 KLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLL 257
++ EM KGI V + V++A+ + VD A + ++M GC P+ + T+I L
Sbjct: 203 NVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHAL 262
Query: 258 CENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKM 314
+ GRV E +L EM GC+PDV T++ L K E L DRM+ G P
Sbjct: 263 XKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNS 322
Query: 315 DTYVMLLRKFGRWGFL-----------RPVFVVW---------------------KKMEE 342
TY +L+ R G + P V++ + M
Sbjct: 323 FTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLS 382
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+GC PD F YN L+ L KG L AR+ EM KG
Sbjct: 383 VGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKG 419
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 156/363 (42%), Gaps = 24/363 (6%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T +YN V+D+L + N+ + M S P TF ++ K + V+ A
Sbjct: 181 TFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGIS-PTVYTFGVVMKALCLVNEVDSACAL 239
Query: 90 FNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
+ G + + + Y L+ AL + V E + + + G + +N
Sbjct: 240 LKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLK----LLEEMLLMGCIP--DVNTFNDA 293
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G KM + + + M RG + +Y + M +C+ GK +A L ++
Sbjct: 294 IHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNP-- 351
Query: 209 KMDVVAYNTVIRAVGVSEG-VDFAMRVYRE-MREMGCQPSVVTCNTVIKLLCENGRVREA 266
+VV +NT+I VS G +D A V E M +GC P + T NT+I LC+ G + A
Sbjct: 352 --NVVLFNTLINGY-VSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSA 408
Query: 267 YAVLAEMPKKGCVPDVITYHCFFR--C----LEKPREILGLFDRMIESGIRPKMDTYVML 320
++ EM KGC P+VITY C LE+ R +L D M G+ Y L
Sbjct: 409 RELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL---DEMSGKGLALNAVGYNCL 465
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + ++ ++ M GC PD F +N+L+ L + A ++M +G+
Sbjct: 466 ISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGV 525
Query: 381 SAK 383
A
Sbjct: 526 IAN 528
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 91/241 (37%), Gaps = 33/241 (13%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+Y M++ + +M + G+V + + M ++G P +A +L +M
Sbjct: 113 VYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 172
Query: 204 KKK-GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
+ + +YN V+ + V+ EM G P+V T V+K LC
Sbjct: 173 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNE 232
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLR 322
V A A+L +M + GCVP+ I Y T + L
Sbjct: 233 VDSACALLKDMTRHGCVPNAIVYQ-----------------------------TLIHALX 263
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
K GR + V + ++M +GC PD +N + L + A K + M +G +
Sbjct: 264 KVGR---VNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTP 320
Query: 383 K 383
Sbjct: 321 N 321
>gi|356561955|ref|XP_003549241.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Glycine max]
Length = 622
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 172/379 (45%), Gaps = 20/379 (5%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLI-------HRMKDNPSSIPNHAT 69
F W +T F +++V++ L K EFD +W L+ + + + T
Sbjct: 144 LFLWAQTRPAFRPGPKLFDAVVNALAKAREFDAAWKLVLHHAEKDGEEEGEKERLVSVGT 203
Query: 70 FRIMFKRYVTAHLVNEAMGTF----NKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELC 124
F IM +RY A + A+ T+ N E+S L+D+LC+ V EA E
Sbjct: 204 FAIMIRRYARAGMSKLAIRTYEFATNNKSIVDSGSEMSLLEILMDSLCKEGSVREASEY- 262
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F K + S + + ++YN++L GWF++ + W EM K + + +Y +
Sbjct: 263 FLWKKELDLSWVPSI---RVYNIMLNGWFRLRKLKQGERLWAEM-KENMRPTVVTYGTLV 318
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ C+ + KA+++ +M K+GI + + YN +I A+ + A+ + +
Sbjct: 319 EGYCRMRRVEKALEMVGDMTKEGIAPNAIVYNPIIDALAEAGRFKEALGMLERFHVLEIG 378
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGL 301
P+ T N+++K C+ G + A +L M +G +P TY+ FFR + R+I + L
Sbjct: 379 PTDSTYNSLVKGFCKAGDLVGASKILKMMISRGFLPSATTYNYFFRYFSRCRKIEEGMNL 438
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
+ ++I+SG P TY +L++ L V K+M G D LV L
Sbjct: 439 YTKLIQSGYTPDRLTYHLLVKMLCEEEKLDLAVQVSKEMRHNGYDMDLATSTMLVHLLCK 498
Query: 362 KGMLDMARKYDEEMFAKGL 380
L+ A E+M +G+
Sbjct: 499 VRRLEEAFVEFEDMIRRGI 517
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 127/284 (44%), Gaps = 12/284 (4%)
Query: 6 CYANDWKRALEFFNWV-ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C + A E+F W E D + + YN +++ + + L MK+N
Sbjct: 251 CKEGSVREASEYFLWKKELDLSWVPSIRVYNIMLNGWFRLRKLKQGERLWAEMKENMR-- 308
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
P T+ + + Y V +A+ + + G+ + + Y ++DAL E EA L
Sbjct: 309 PTVVTYGTLVEGYCRMRRVEKALEMVGDMTKEGIAPNAIVYNPIIDALAEAGRFKEA--L 366
Query: 124 CFGENKNVGFSGLVEMNKT-KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
E +V +E+ T YN +++G+ K + + M RG + +Y+
Sbjct: 367 GMLERFHV-----LEIGPTDSTYNSLVKGFCKAGDLVGASKILKMMISRGFLPSATTYNY 421
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ + K + + LY ++ + G D + Y+ +++ + E +D A++V +EMR G
Sbjct: 422 FFRYFSRCRKIEEGMNLYTKLIQSGYTPDRLTYHLLVKMLCEEEKLDLAVQVSKEMRHNG 481
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
+ T ++ LLC+ R+ EA+ +M ++G VP +T+
Sbjct: 482 YDMDLATSTMLVHLLCKVRRLEEAFVEFEDMIRRGIVPQYLTFQ 525
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 154/321 (47%), Gaps = 14/321 (4%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+PN + M Y + A + +++ G+K D ++Y L+ CE +E E
Sbjct: 759 VPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGD-MENAE 817
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ K G S VE YN+++ G+ + + KC + +EM+ G + ++ SY
Sbjct: 818 QEVNKMKLKGVSPSVE-----TYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGT 872
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ +CK K +A + ++M+ +G+ +V YN +I ++ A R EM + G
Sbjct: 873 LINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKG 932
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREIL 299
+ ++VT NT+I L NG++ EA +L E+ +KG PDV TY+ +R + +
Sbjct: 933 IELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCI 992
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
L++ M SGI+P + TY +L+ + G + + K E+ PD YN ++
Sbjct: 993 ALYEEMKTSGIKPTLKTYHLLISLCTKEG----IELTKKIFGEMSLQPDLLVYNGVLHCY 1048
Query: 360 IDKGMLDMARKYDEEMFAKGL 380
G +D A ++M K +
Sbjct: 1049 AVHGDMDKAFNLQKQMIEKSI 1069
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 114/240 (47%), Gaps = 3/240 (1%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+Y ++ K+S GK E + M + + Y++ +D +CK + A +L+ EM
Sbjct: 554 MYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEM 613
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
+ + ++ YNT+I + + +V M+ +PS++T NT++K L + G V
Sbjct: 614 LARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMV 673
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFF---RCLEKPREILGLFDRMIESGIRPKMDTYVML 320
+A VL EM +G VPD T+ F +K LG+++ ++SG++ T +L
Sbjct: 674 EDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSIL 733
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
L + G + + + G P+E YN ++D KG L AR + M +G+
Sbjct: 734 LNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGM 793
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 162/412 (39%), Gaps = 66/412 (16%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKR 76
F N +E+D F + Y I K + L +RMK + S P + ++
Sbjct: 540 FLNILESD--FRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIS-PTVFIYNVLIDG 596
Query: 77 YVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGL 136
+ +A F DE+ L+ +L Y +I+ C N F
Sbjct: 597 LCKVRQMKDAEQLF---------DEMLARRLLPSLITYNTLIDG--YCKDGNPEKSFKVR 645
Query: 137 VEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS 190
M I +N +L+G FK EM +G V D ++SI D +
Sbjct: 646 ERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSN 705
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY-REMREMGCQPSVVT 249
K A+ +Y+ G+KM+ + ++ A+ ++ A + REM + G P+ V
Sbjct: 706 DKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAK-GLVPNEVL 764
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC------LEKPREILGLFD 303
NT+I G + A + M K+G PD + Y+C R +E + + +
Sbjct: 765 YNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEV---N 821
Query: 304 RMIESGIRPKMDTYVMLLRKFGR-------------------------WGFLRPVF---- 334
+M G+ P ++TY +L+ +GR +G L
Sbjct: 822 KMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGS 881
Query: 335 ------VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+V + ME+ G SP+ YN L+D KG ++ A ++ EEMF KG+
Sbjct: 882 KLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGI 933
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 89/212 (41%), Gaps = 3/212 (1%)
Query: 172 GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFA 231
G+ S ++ +D + K+ + + ++ + + + Y I+A V
Sbjct: 512 GIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKG 571
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR- 290
+ ++ M+ P+V N +I LC+ ++++A + EM + +P +ITY+
Sbjct: 572 LELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDG 631
Query: 291 -CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
C + P + + +RM I P + T+ LL+ + G + V +M++ G PD
Sbjct: 632 YCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPD 691
Query: 349 EFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
F ++ L D D A E GL
Sbjct: 692 AFTFSILFDGYSSNDKADAALGVYETAVDSGL 723
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 126/328 (38%), Gaps = 86/328 (26%)
Query: 28 THTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF------------- 74
+ + +TYN +I G+ +EFD ++L+ M+DN ++PN ++ +
Sbjct: 829 SPSVETYNILIGGYGRKYEFDKCFDLLKEMEDN-GTMPNVVSYGTLINCLCKGSKLLEAQ 887
Query: 75 --KRYVTAHLVNEAMGTFNKL-----------DEFGLKDE----------VSYCNLVDAL 111
KR + V+ + +N L D F +E V+Y L+D L
Sbjct: 888 IVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGL 947
Query: 112 CEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFW 165
+ EA+++ L+E+++ + YN ++ G+ +C +
Sbjct: 948 SMNGKLAEAEDM------------LLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALY 995
Query: 166 EEMDKRGVVKDLHSYSIYMDIMCKSG-------------KPW------------------ 194
EEM G+ L +Y + + + K G +P
Sbjct: 996 EEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMD 1055
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
KA L K+M +K I +D YN++I + + EM+ +P T + ++
Sbjct: 1056 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIV 1115
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDV 282
K CE AY EM +KG + DV
Sbjct: 1116 KGHCEMKDYMGAYVWYREMQEKGLLLDV 1143
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 20/246 (8%)
Query: 33 TYNSVIDIL---GKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
TYN++ID L GK E + I R P T+ + Y A V +
Sbjct: 939 TYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVF----TYNSLISGYRFAGNVQRCIAL 994
Query: 90 FNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+ ++ G+K + +L+ +LC K IE + FGE + +YN +L
Sbjct: 995 YEEMKTSGIKPTLKTYHLLISLCT-KEGIELTKKIFGE--------MSLQPDLLVYNGVL 1045
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
+ K ++M ++ + D +Y+ + K GK + L EMK + ++
Sbjct: 1046 HCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREME 1105
Query: 210 MDVVAYNTVIRAVGVSEGVDF--AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ Y+ +++ G E D+ A YREM+E G V + ++ L E R +EA
Sbjct: 1106 PEADTYDIIVK--GHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAE 1163
Query: 268 AVLAEM 273
V++EM
Sbjct: 1164 NVISEM 1169
>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 711
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 173/428 (40%), Gaps = 81/428 (18%)
Query: 28 THTTDTYNSVIDILGKFFEFDLSWNLIHRMKDN--PSSIPNHATF-----------RIMF 74
T T TYN++I + + + + NLI RM+ + S N++ +M
Sbjct: 196 TLTPLTYNALIGACARNNDIEKALNLISRMRQDGYQSDFVNYSLVIQSLTRCNKIDSVML 255
Query: 75 KRY----------VTAHLVNEAMGTFNK-------LDEFGLKDEV-------SYCNLVDA 110
+R + LVN+ + F K L G+ + +++ A
Sbjct: 256 QRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSRALQLLGMAQATGLSAKTATLVSIISA 315
Query: 111 LCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDK 170
L +EA+ L F E + G +TK YN +L+G+ K EM+K
Sbjct: 316 LANSGRTLEAEAL-FEELRQSGIKP-----RTKAYNALLKGYVKTGPLKDAELMVSEMEK 369
Query: 171 RGVVKDLHSYSIYMDIMCKSGK----------------------------------PW-K 195
RGV D H+YS+ +D +G+ W K
Sbjct: 370 RGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQK 429
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
++ KEMK G+K D YN VI G +D AM + M G +P VT NT+I
Sbjct: 430 TFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLID 489
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRP 312
C++GR A + M ++GC+P TY+ E+ ++ L +M GI P
Sbjct: 490 CHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILP 549
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
+ T+ L+ +G+ G ++M+ +G P YNAL++A +G+ + A
Sbjct: 550 NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF 609
Query: 373 EEMFAKGL 380
M + GL
Sbjct: 610 RVMTSDGL 617
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 132/260 (50%), Gaps = 10/260 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ + ++ + + ++ AM TF+++ G++ D V++ L+D C++ I A+E+
Sbjct: 444 PDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEM 503
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ G + T YN+++ + W + +M +G++ ++ +++
Sbjct: 504 FEAMERR----GCLPCATT--YNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTL 557
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D+ KSG+ A++ +EMK G+K YN +I A + A+ +R M G
Sbjct: 558 VDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGL 617
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILG 300
+PS++ N++I E+ R EA+AVL M + G PDV+TY + L +K +++ G
Sbjct: 618 KPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPG 677
Query: 301 LFDRMIESGIRPKMDTYVML 320
+++ MI SG +P ML
Sbjct: 678 VYEEMIMSGCKPDRKARSML 697
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 163/408 (39%), Gaps = 41/408 (10%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDIL---GKFFEFDLSWNLIHRMKDNPSSI 64
+ D RAL+ + + T T S+I L G+ E + + + + P +
Sbjct: 284 SGDPSRALQLLGMAQA-TGLSAKTATLVSIISALANSGRTLEAEALFEELRQSGIKPRT- 341
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALC------EYKHV 117
+ + K YV + +A +++++ G+ DE +Y L+DA + V
Sbjct: 342 ---KAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIV 398
Query: 118 IEAQELCFGENKNVGFSGLV-------EMNKT----------------KIYNMILRGWFK 154
++ E + + FS L+ E KT + YN+++ + K
Sbjct: 399 LKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGK 458
Query: 155 MSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVA 214
+ ++ M G+ D +++ +D CK G+ A ++++ M+++G
Sbjct: 459 FNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATT 518
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
YN +I + G E D R+ +M+ G P+VVT T++ + ++GR +A L EM
Sbjct: 519 YNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMK 578
Query: 275 KKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
G P Y+ + + + F M G++P + L+ FG
Sbjct: 579 SVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDA 638
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
F V + M+E G PD Y L+ ALI EEM G
Sbjct: 639 EAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPGVYEEMIMSG 686
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 89/221 (40%), Gaps = 12/221 (5%)
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
YSI + + +S K ++A L ++ + + YN +I A + ++ A+ + MR
Sbjct: 172 YSILIHALGRSEKLYEAFLLSQKQT-----LTPLTYNALIGACARNNDIEKALNLISRMR 226
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYA--VLAEMPKKGCVPDVITYHCFFRCLEK--- 294
+ G Q V + VI+ L ++ + E+ + DV + K
Sbjct: 227 QDGYQSDFVNYSLVIQSLTRCNKIDSVMLQRLYKEIERDKLELDVQLVNDIIMGFAKSGD 286
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
P L L +G+ K T V ++ G +++++ + G P AYNA
Sbjct: 287 PSRALQLLGMAQATGLSAKTATLVSIISALANSGRTLEAEALFEELRQSGIKPRTKAYNA 346
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
L+ + G L A EM +G+S P E + L+
Sbjct: 347 LLKGYVKTGPLKDAELMVSEMEKRGVS--PDEHTYSLLIDA 385
>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 889
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 149/313 (47%), Gaps = 14/313 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQEL 123
P+ F + Y A L ++A + + FGL S C+ L+ L + EA EL
Sbjct: 474 PSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATEL 533
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
G+ G S + ++L +FK + W EM++RG+ D+ ++S +
Sbjct: 534 -IGQMIEKGLS-----VNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAF 587
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D + K G +A ++ EM +KG+ + AYN++I ++ A+++ + MR G
Sbjct: 588 IDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGL 647
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG--- 300
P + T N +I LC+ GR+R A V +M + G PD+ITY+ K +++
Sbjct: 648 LPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADN 707
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA-- 358
L +RM SG P + TY + + F + ++ ++ G P+ YN++++
Sbjct: 708 LVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVC 767
Query: 359 --LIDKGMLDMAR 369
++D+ M+ AR
Sbjct: 768 SDILDRAMILTAR 780
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 189/430 (43%), Gaps = 54/430 (12%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
Y N WK + C +T ++ +I + L +L+H M PN
Sbjct: 247 YGNVWKLFKDVIRRGPQPCKYT-----FSGIILGFCRKGCIHLGESLLHLMPKFHCE-PN 300
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCF 125
+ I+ ++A+ FN + E G V ++ +++A C+ +V+EA++L F
Sbjct: 301 AFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKL-F 359
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM- 184
K +GFS +YN ++ G+ KM + +EEM K+G+ D +++I +
Sbjct: 360 DGLKEMGFSP-----NAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVS 414
Query: 185 ------------------------------DI----MCKSGKPWKAVKLYKEMKKKGIKM 210
DI +C +G+ +A++ +M +KG+
Sbjct: 415 GHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSP 474
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
++A+N+VI A + D A Y+ M G PS TC++++ L NGR++EA ++
Sbjct: 475 SIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELI 534
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRW 327
+M +KG + + + K +++G L+ M GI P + + + +
Sbjct: 535 GQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQ 594
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREE 387
G + + V+ +M G P+ FAYN+L+ G L+ A K ++ M +GL +
Sbjct: 595 GLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLP---DI 651
Query: 388 LGTKLVQGGL 397
T ++ GGL
Sbjct: 652 FTTNMIIGGL 661
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 148/332 (44%), Gaps = 12/332 (3%)
Query: 26 HF--THTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLV 83
HF T + T +S++ L + LI +M + S+ N A F ++ ++ V
Sbjct: 504 HFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMA-FTVLLDKFFKRGDV 562
Query: 84 NEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKT 142
A + +++ G+ D V++ +D L + V EA + + GL+ N
Sbjct: 563 VGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRK----GLIPNNFA 618
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
YN ++ G+ K + + + M RG++ D+ + ++ + +CK G+ A+ ++ +
Sbjct: 619 --YNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMD 676
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M + G+ D++ YNT+I + + A + M G P + T N I C + R
Sbjct: 677 MHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRR 736
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPREILGLFDRMIESGIRPKMDTYVML 320
+ A +L E+ G VP+ +TY+ C + + L R+++ P + T +L
Sbjct: 737 MNRAVLMLDELVSAGIVPNTVTYNSMLNGVCSDILDRAMILTARLLKMAFVPNVVTANLL 796
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
L +F + G + K+ E+ + DE Y
Sbjct: 797 LSQFYKQGMPERTLMWGHKLSEIPYAFDEITY 828
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 165/408 (40%), Gaps = 37/408 (9%)
Query: 6 CYANDWKRALEFFNW-VETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C AL +FN +E C+ T T+N+VI+ K + L +K+ S
Sbjct: 312 CIRGRTSDALAWFNLMIERGCN--PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFS- 368
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHV------ 117
PN + + YV +++A + ++ + G+ D +++ LV +Y
Sbjct: 369 PNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRL 428
Query: 118 -----------------IEAQELCFGENKNVGFSGLVEMNKTKI------YNMILRGWFK 154
I LC+ + L++M + + +N ++ + +
Sbjct: 429 LKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQ 488
Query: 155 MSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVA 214
K E ++ M G+ + S + + +G+ +A +L +M +KG+ ++ +A
Sbjct: 489 AGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMA 548
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
+ ++ V A ++ EM G P VV + I L + G V EAY V EM
Sbjct: 549 FTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEML 608
Query: 275 KKGCVPDVITYH---CFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
+KG +P+ Y+ C F K E L L M G+ P + T M++ + G +R
Sbjct: 609 RKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMR 668
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
V+ M + G SPD YN L++ + A M+A G
Sbjct: 669 SAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASG 716
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 85/209 (40%), Gaps = 38/209 (18%)
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLL------------- 257
D ++++RA +E A+ + MRE+G +PS + KLL
Sbjct: 195 DFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLF 254
Query: 258 ----------------------CENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE 293
C G + ++L MPK C P+ Y+ C+
Sbjct: 255 KDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIR 314
Query: 294 -KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
+ + L F+ MIE G P + T+ ++ F + G + ++ ++E+G SP+ Y
Sbjct: 315 GRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMY 374
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKGLS 381
N L++ + +D A EEM KG++
Sbjct: 375 NTLMNGYVKMREIDQANMLYEEMRKKGIA 403
>gi|125540181|gb|EAY86576.1| hypothetical protein OsI_07956 [Oryza sativa Indica Group]
gi|125582780|gb|EAZ23711.1| hypothetical protein OsJ_07414 [Oryza sativa Japonica Group]
gi|215768726|dbj|BAH00955.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 500
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 172/391 (43%), Gaps = 26/391 (6%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+ +DWK AL FF W ++ + HT N ++D+LGK + D W L+ M + +
Sbjct: 92 FGDDWKSALGFFQWAQSRDDYRHTAYACNRMVDLLGKMRQIDQMWELLSDM--HGRGLVT 149
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCF 125
T +R A + + F+KL++ GL+ N L+D LC+ + + A+E+
Sbjct: 150 VETVAKSIRRLAGARRWKDVVLLFDKLEDMGLERNTETMNVLLDVLCKERKIEVAREVFA 209
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
+ ++ +N+ + GW + + EEM +RG + +Y+ ++
Sbjct: 210 VLSPHIPPDAYT-------FNIFVHGWCSIRRIDEAMWTIEEMKRRGFPPSVITYTTVLE 262
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
CK + ++ M +G +V+ Y ++ ++ E + A+ V M+ GC+P
Sbjct: 263 AYCKQRNFRRVYEVLDSMGSQGCHPNVITYTMIMTSLAKCERFEEALSVSHRMKSSGCKP 322
Query: 246 SVVTCNTVIKLLCENGRVREAYAVL-AEMPKKGCVPDVITYH------CFFRCLEKPREI 298
+ N++I LL ++G + EA V EMP G ++ TY+ C++ + +
Sbjct: 323 DTLFYNSLINLLGKSGHLFEASQVFRVEMPMNGVSHNLATYNTMISIFCYY---GRDDDA 379
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKF----GRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
L + M +P + +Y LLR F G+ +R + LG D Y
Sbjct: 380 LNVLKEMEAQSCKPDIQSYRPLLRLFLSRRGQADTVRHLLSELTSKHNLGLDLD--TYTL 437
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
L+ L G A + +EM + ++ + +
Sbjct: 438 LIHGLCRVGDTVWAYQLFDEMVSSEIAPRSK 468
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 175/399 (43%), Gaps = 41/399 (10%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
++YN +I+ K E + + R+ D+ S PN AT+ + + +AM
Sbjct: 139 ANSYNVLINAYCKSGEIEEAL----RVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVL 194
Query: 91 NKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENK-----------NVGFSG--- 135
++ + +V C L+DA C+ V +A +L F E + NV G
Sbjct: 195 DRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKL-FNEMRGKGCKPDVVTYNVLIKGFCK 253
Query: 136 -------LVEMNKTKIY---------NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
++ + K Y NMILR W + M ++G + +
Sbjct: 254 EGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVT 313
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
++I ++ +C+ G KA+ + + M K G + ++N +I+ +G+D A+ M
Sbjct: 314 FNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMV 373
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPR 296
GC P +VT N ++ LC++G+V +A +L+++ KGC P +I+Y+ L K
Sbjct: 374 SRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAE 433
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
+ L + M G++P + T ++ R G + + ++ G P+ F YN+++
Sbjct: 434 LAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIM 493
Query: 357 DALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
L +A + +M A G KP E T L++G
Sbjct: 494 MGLCKAQQTSLAIDFLVDMVANG--CKPTEASYTTLIKG 530
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 169/383 (44%), Gaps = 57/383 (14%)
Query: 60 NPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVI 118
N IP+ + + + A L+E G + D SY L++A C+ +
Sbjct: 97 NKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIE 156
Query: 119 EAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVK--- 175
EA + ++ +V Y+ +L + GK ++ + +D++ K
Sbjct: 157 EALRVL--DHTSVA-------PNAATYDAVL---CSLCDRGKLKQAMQVLDRQLQSKCYP 204
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
D+ + ++ +D CK +A+KL+ EM+ KG K DVV YN +I+ +D A+
Sbjct: 205 DVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFL 264
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF--FRC-- 291
+++ GCQ V++ N +++ LC GR +A +LA M +KGC P V+T++ F C
Sbjct: 265 KKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQK 324
Query: 292 --LEKPREILGL-------------------------FDRMIES-------GIRPKMDTY 317
L K +L + DR IE G P + TY
Sbjct: 325 GLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTY 384
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
+LL + G + V+ ++ GCSP +YN ++D L+ G ++A + EEM
Sbjct: 385 NILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCY 444
Query: 378 KGLSAKPREELGTKLVQGGLDGE 400
KGL KP T +V GGL E
Sbjct: 445 KGL--KPDLITCTSVV-GGLSRE 464
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 6/219 (2%)
Query: 164 FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
F E M +G + D+ + + + CK G+ A ++ +++ G +D +YN +I A
Sbjct: 91 FLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYC 150
Query: 224 VSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVI 283
S ++ A+RV + P+ T + V+ LC+ G++++A VL + C PDV+
Sbjct: 151 KSGEIEEALRV---LDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVV 207
Query: 284 TYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
T K + + LF+ M G +P + TY +L++ F + G L + KK+
Sbjct: 208 TCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKL 267
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
GC D ++N ++ +L G A K M KG
Sbjct: 268 PSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKG 306
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 118/275 (42%), Gaps = 9/275 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C W A++ + F T+N +I+ L + + N++ M + + P
Sbjct: 287 CSGGRWMDAMKLLATMLRKGCFPSVV-TFNILINFLCQKGLLGKALNVLEMMPKHGHT-P 344
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELC 124
N +F + + + ++ A+ + G D V+Y L+ ALC+ V +A +
Sbjct: 345 NSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVIL 404
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+ L+ YN ++ G K+ E EEM +G+ DL + + +
Sbjct: 405 SQLSSKGCSPSLIS------YNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVV 458
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ + GK +A+K + +K GIK + YN+++ + ++ A+ +M GC+
Sbjct: 459 GGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCK 518
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
P+ + T+IK + G EA + E+ +G V
Sbjct: 519 PTEASYTTLIKGITYEGLAEEASKLSNELYSRGLV 553
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 58/147 (39%)
Query: 233 RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
R M G P VV C +I+ C+ GR + A ++ + + G V D +Y+
Sbjct: 90 RFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAY 149
Query: 293 EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
K EI + + + P TY +L G L+ V + + C PD
Sbjct: 150 CKSGEIEEALRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTC 209
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKG 379
L+DA + + A K EM KG
Sbjct: 210 TVLIDATCKESGVGQAMKLFNEMRGKG 236
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 178/415 (42%), Gaps = 49/415 (11%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A RALE + T YN+VI + +++ M++ P
Sbjct: 165 CSAGKPARALELLRQMPRPNAVT-----YNTVIAGFCSRGRVQAALDIMREMRERGGIAP 219
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDE-VSYCNLVDALCE---------- 113
N T+ + + V+EA+ F+++ G +K E V Y L+ C+
Sbjct: 220 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLY 279
Query: 114 ---------------YKHVIEAQELCFGENKNVGFSGLVEMNKTK-------IYNMILRG 151
Y ++ A F + + LVE K YN+++ G
Sbjct: 280 RDRMVERGVAMTVATYNLLVHA---LFMDGRGTEAYELVEEMGGKGLALDVFTYNILING 336
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K K E +E M +RGV + +Y+ + + K G+ + KL+ E ++GI+ D
Sbjct: 337 HCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPD 396
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+V YN +I + S +D A + EM + P VT NT+++ LC GRV EA ++
Sbjct: 397 LVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID 456
Query: 272 EMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM K+G PD++TY+ ++ L + + M+ G P + TY L++ + G
Sbjct: 457 EMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNG 516
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAK 383
+ K+M E G +PD+ Y +L++ L + R D+E A +AK
Sbjct: 517 QGDDAENMVKEMVENGITPDDSTYISLIEGLTTED----ERAIDDERLAAADAAK 567
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 9/209 (4%)
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+++I + +C +GKP +A++L ++M + + V YNTVI V A+ + REM
Sbjct: 156 TFNIMLRHLCSAGKPARALELLRQMPRP----NAVTYNTVIAGFCSRGRVQAALDIMREM 211
Query: 239 REM-GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV-PDVITYHCFFR--CLEK 294
RE G P+ T TVI C+ GRV EA V EM KG V P+ + Y+ C +
Sbjct: 212 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 271
Query: 295 PREILGLF-DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
+ L+ DRM+E G+ + TY +L+ G + + ++M G + D F YN
Sbjct: 272 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYN 331
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGLSA 382
L++ +G + A + E M +G+ A
Sbjct: 332 ILINGHCKEGNVKKALEIFENMSRRGVRA 360
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 9/191 (4%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A L+ +M + + + +N ++R + + A+ + R+M +P+ VT NTVI
Sbjct: 138 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIA 193
Query: 256 LLCENGRVREAYAVLAEMPKKGCV-PDVITYHCFFRC---LEKPREILGLFDRMIESG-I 310
C GRV+ A ++ EM ++G + P+ TY + + E + +FD M+ G +
Sbjct: 194 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 253
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
+P+ Y L+ + G L + +M E G + YN LV AL G A +
Sbjct: 254 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 313
Query: 371 YDEEMFAKGLS 381
EEM KGL+
Sbjct: 314 LVEEMGGKGLA 324
>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
Length = 845
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 157/340 (46%), Gaps = 16/340 (4%)
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQ 121
S P T+ I+ Y H + + +L + GL D+ SY +L+ + V +A
Sbjct: 172 SPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAH 230
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
L F E G + K I N I++ KM K ++M G+ DL +YS
Sbjct: 231 CL-FLEMMEQGV-----LPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYS 284
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+ +D +CKS KA ++ ++M + G + + + YN++I +S + ++RV+++M
Sbjct: 285 LIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSC 344
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCLEKP 295
G P+V CN+ I L ++GR EA + M KG PD+I+Y C++
Sbjct: 345 GVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVW 404
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
+F+ M+ GI P + +L+ + R G + ++++ M+ G PD + +
Sbjct: 405 VMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATV 464
Query: 356 VDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+ +L G LD A M G+ P E + L+QG
Sbjct: 465 ISSLCRIGRLDDALHKFNHMVDIGV--PPSEAVYGCLIQG 502
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 168/373 (45%), Gaps = 21/373 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+ +ID L K D + ++ +M + + PN T+ + Y + + NE++ F +
Sbjct: 282 TYSLIIDGLCKSKAMDKAERVLEQMVE-AGTRPNSITYNSLIHGYSISGMWNESVRVFKQ 340
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G+ V CN + AL ++ EA+ C + S +++ K I +
Sbjct: 341 MSSCGVIPTVDNCNSFIHALFKHGRTNEAK--CIFD------SMVLKGPKPDIISYSTNA 392
Query: 152 -----WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
W+ W + M +G+ + H ++I ++ + G KA+ ++++M+ K
Sbjct: 393 SWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK 452
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
G+ D V + TVI ++ +D A+ + M ++G PS +I+ C +G + +A
Sbjct: 453 GMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKA 512
Query: 267 YAVLAEMPKKGCVPDVITYHCFF---RCLE-KPREILGLFDRMIESGIRPKMDTYVMLLR 322
+++EM K P + Y C E + E + D M+++G RP + T+ L+
Sbjct: 513 KELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLME 572
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ G + F + M +G P+ + Y LVD G +D A +M KG+
Sbjct: 573 GYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGV-- 630
Query: 383 KPREELGTKLVQG 395
KP L + ++ G
Sbjct: 631 KPTSVLYSIILHG 643
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 147/354 (41%), Gaps = 36/354 (10%)
Query: 53 LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDAL 111
LI N IP+ TF + +++A+ FN + + G+ E Y L+
Sbjct: 444 LIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGC 503
Query: 112 CEYKHVIEAQELCFGE--NKNVG------FSGLV-----------------------EMN 140
C + +++A+EL E NK++ FS ++ +
Sbjct: 504 CNHGELVKAKEL-ISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRP 562
Query: 141 KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
+N ++ G+ + + + M G+ + + Y +D CK+G+ A+ ++
Sbjct: 563 NVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVF 622
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
++M KG+K V Y+ ++ + + A +++ EM E G S+ T V+ LC N
Sbjct: 623 RDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRN 682
Query: 261 GRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTY 317
EA +L ++ D+IT++ + K +E LFD + G+ P + TY
Sbjct: 683 NCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTY 742
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
M++ + ++ +E+ G + D N +V L++K + A Y
Sbjct: 743 SMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNY 796
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 180/418 (43%), Gaps = 46/418 (11%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A EF N + + F T +Y +V+ L ++ L M + + +PN TF ++
Sbjct: 265 AREFLNRLSSY-GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK-NCMPNEVTFDML 322
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV-DALCEYKHVIEAQELCFGENKNVG 132
+ + +V A+ ++ G + CN+V + +C+ V +A F N+G
Sbjct: 323 VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDA----FQFLNNMG 378
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
G T Y +L+G + W +E +EM ++ + +++ ++ I+C+ G
Sbjct: 379 SYGCSP--DTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGL 436
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY----------------- 235
+A L ++M + G ++++V YN ++ V VD A+ ++
Sbjct: 437 IEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLT 496
Query: 236 ---------------REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVP 280
EM + C P+VVT N ++ C+ G + EA ++ +M + GC P
Sbjct: 497 GLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTP 556
Query: 281 DVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVW 337
++ITY+ + K E L L ++ +G+ P + TY ++ R + ++
Sbjct: 557 NLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMF 616
Query: 338 KKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+++LG P YN ++ AL + D A + M + G P E L++G
Sbjct: 617 HIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNG--CMPNELTYITLIEG 672
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 114/240 (47%), Gaps = 6/240 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G+ + R M V D ++Y+ + +C G+ +A+ L +M
Sbjct: 147 YNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDML 203
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+G + VV Y ++ AV S G AM V EMR GC P++VT N +I +C GRV
Sbjct: 204 HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 263
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLL 321
+A L + G PD ++Y + L + ++ LF M+E P T+ ML+
Sbjct: 264 DAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLV 323
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
R F R G + V ++M GC+ + N +++ + +G +D A ++ M + G S
Sbjct: 324 RFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCS 383
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 149/354 (42%), Gaps = 22/354 (6%)
Query: 33 TYNSVIDIL---GKFFE-FDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
TY +I L G+ E L +++HR P+ T+ ++ + + +AM
Sbjct: 178 TYTPIIRGLCDRGRVGEALSLLDDMLHR-----GCQPSVVTYTVLLEAVCKSTGFGQAME 232
Query: 89 TFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
+++ G V+Y +++ +C V +A+E + GF T Y
Sbjct: 233 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF-LNRLSSYGFQP-----DTVSYTT 286
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
+L+G W E + EM ++ + + ++ + + C+ G +A+++ ++M G
Sbjct: 287 VLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG 346
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ N VI + VD A + M GC P ++ TV+K LC R +A
Sbjct: 347 CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAK 406
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKF 324
+L EM +K C P+ +T++ F L + + L ++M E G + TY L+ F
Sbjct: 407 ELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGF 466
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
G + ++ M C P+ Y L+ L + LD A + EM K
Sbjct: 467 CVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQK 517
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 146/348 (41%), Gaps = 45/348 (12%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN+++ ++ + D + LI M P+ T+ + + V EA+ + +
Sbjct: 147 YNTLVAGYCRYGQLDAARRLIASMP----VAPDAYTYTPIIRGLCDRGRVGEALSLLDDM 202
Query: 94 DEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
G + V +Y L++A+C+ +A E+ E + G + + YN+I+ G
Sbjct: 203 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEV-LDEMRAKGCTPNI-----VTYNVIINGM 256
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK-LYKEMKKKGIKMD 211
+ REF + G D SY+ + +C + K W+ V+ L+ EM +K +
Sbjct: 257 CREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLC-AAKRWEDVEELFAEMMEKNCMPN 315
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V ++ ++R V+ A++V +M GC + CN VI +C+ GRV +A+ L
Sbjct: 316 EVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLN 375
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
M GC PD I+Y T + L + RW +
Sbjct: 376 NMGSYGCSPDTISY-----------------------------TTVLKGLCRAERWEDAK 406
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ K+M C P+E +N + L KG+++ A E+M G
Sbjct: 407 ELL---KEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 451
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 122/285 (42%), Gaps = 18/285 (6%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWG 159
D +Y LV C Y + A+ L + + Y I+RG G
Sbjct: 143 DVFAYNTLVAGYCRYGQLDAARRL---------IASMPVAPDAYTYTPIIRGLCDRGRVG 193
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+ ++M RG + +Y++ ++ +CKS +A+++ EM+ KG ++V YN +I
Sbjct: 194 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVII 253
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
+ VD A + G QP V+ TV+K LC R + + AEM +K C+
Sbjct: 254 NGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCM 313
Query: 280 PDVITYHCFFR--C----LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
P+ +T+ R C +E+ ++L ++M G +++ + G +
Sbjct: 314 PNEVTFDMLVRFFCRGGMVERAIQVL---EQMSGHGCAANTTLCNIVINTICKQGRVDDA 370
Query: 334 FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
F M GCSPD +Y ++ L + A++ +EM K
Sbjct: 371 FQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK 415
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 18/224 (8%)
Query: 169 DKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV 228
++ G D+ +Y+ + C+ G+ A +L M + D Y +IR + V
Sbjct: 136 ERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRV 192
Query: 229 DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
A+ + +M GCQPSVVT +++ +C++ +A VL EM KGC P+++TY+
Sbjct: 193 GEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVI 252
Query: 289 FR--CLE----KPREILGLFDRMIESGIRPKMDTYVMLLRKF---GRWGFLRPVFVVWKK 339
C E RE L +R+ G +P +Y +L+ RW + +F +
Sbjct: 253 INGMCREGRVDDAREFL---NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFA---E 306
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAK 383
M E C P+E ++ LV GM++ A + E+M G +A
Sbjct: 307 MMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAAN 350
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 170 KRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVD 229
RG D++ + + +C+ G+ A ++ + ++ G +DV AYNT++ +D
Sbjct: 102 SRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLD 161
Query: 230 FAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF 289
A R+ + M P T +I+ LC+ GRV EA ++L +M +GC P V+TY
Sbjct: 162 AARRL---IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLL 218
Query: 290 RCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
+ K + + + D M G P + TY +++ R G + ++ G
Sbjct: 219 EAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQ 278
Query: 347 PDEFAYNALVDALIDKGMLDMARKYD-EEMFAK 378
PD +Y ++ KG+ R D EE+FA+
Sbjct: 279 PDTVSYTTVL-----KGLCAAKRWEDVEELFAE 306
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 127/307 (41%), Gaps = 18/307 (5%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRM--KDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
T +Y +V+ L + ++ + L+ M K+ P PN TF L+ +A
Sbjct: 386 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCP---PNEVTFNTFICILCQKGLIEQATM 442
Query: 89 TFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
++ E G + + V+Y LV+ C V A EL F + T Y
Sbjct: 443 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALEL---------FYSMPCKPNTITYTT 493
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
+L G E EM ++ ++ ++++ + C+ G +A++L ++M + G
Sbjct: 494 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 553
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+++ YNT++ + + A+ + + G P +VT +++I +L RV EA
Sbjct: 554 CTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI 613
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFD---RMIESGIRPKMDTYVMLLRKF 324
+ + G P + Y+ L K G D M+ +G P TY+ L+
Sbjct: 614 KMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGL 673
Query: 325 GRWGFLR 331
FL+
Sbjct: 674 ANEDFLK 680
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 126/287 (43%), Gaps = 24/287 (8%)
Query: 6 CYANDWKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C A W+ A E V +C T +N+ I IL + + + LI +M ++ +
Sbjct: 397 CRAERWEDAKELLKEMVRKNCPPNEVT--FNTFICILCQKGLIEQATMLIEQMSEHGCEV 454
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELC 124
N T+ + + V+ A+ F + + ++Y L+ LC + + A EL
Sbjct: 455 -NIVTYNALVNGFCVQGRVDSALELFYSMP--CKPNTITYTTLLTGLCNAERLDAAAEL- 510
Query: 125 FGENKNVGFSGLVEM------NKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
L EM +N+++ + + + E E+M + G +L
Sbjct: 511 -----------LAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLI 559
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+Y+ +D + K +A++L + G+ D+V Y+++I + + V+ A++++ +
Sbjct: 560 TYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIV 619
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
+++G +P V N ++ LC+ A A M GC+P+ +TY
Sbjct: 620 QDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTY 666
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 70/184 (38%), Gaps = 35/184 (19%)
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY----- 285
A R+ G P V C +I+ LC GR +A VL + G DV Y
Sbjct: 93 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152
Query: 286 -HCFFRCLEKPR-----------------------------EILGLFDRMIESGIRPKMD 315
+C + L+ R E L L D M+ G +P +
Sbjct: 153 GYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVV 212
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
TY +LL + V +M GC+P+ YN +++ + +G +D AR++ +
Sbjct: 213 TYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRL 272
Query: 376 FAKG 379
+ G
Sbjct: 273 SSYG 276
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 161/361 (44%), Gaps = 45/361 (12%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA--- 120
PN F + V EA+ +++ E GL+ ++++Y +VD +C+ + A
Sbjct: 175 PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNL 234
Query: 121 ----QELCFGENKNVGFSGLV-----------------EMNKTKI------YNMILRGWF 153
+E+ + V +S ++ EM + I YN ++ G+
Sbjct: 235 LRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFC 294
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
W + + EM +R + D+ ++S+ ++ + K GK ++A +LY EM +GI + +
Sbjct: 295 SSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTI 354
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
YN++I +D A R++ M GC P V+T + +I C RV + +L EM
Sbjct: 355 TYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEM 414
Query: 274 PKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
++G V + ITY F L L L MI SG+ P + T LL G L
Sbjct: 415 SRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKL 474
Query: 331 RPVFVVWKKME----ELGCS-------PDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ ++K M+ +L S PD YN L+ LI++G A + EEM +G
Sbjct: 475 KDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRG 534
Query: 380 L 380
L
Sbjct: 535 L 535
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 170/391 (43%), Gaps = 31/391 (7%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C D AL +E Y+++ID L K + NL M++ S P
Sbjct: 223 CKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGIS-P 281
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N T+ M + ++ +EA ++ E + D V++ L++AL + EA+EL
Sbjct: 282 NLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEEL- 340
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+ E G + T YN ++ G+ K + + M +G D+ ++SI +
Sbjct: 341 YNEMLPRGI-----IPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILI 395
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D C + + +KL EM ++G+ + + Y T+I ++ A+ + +EM G
Sbjct: 396 DGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVC 455
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDR 304
P+VVTCNT++ LC NG++++A + M K D+ H F
Sbjct: 456 PNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKM--DLDASHPF---------------- 497
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
+ + P + TY +L+ G ++++M G PD YN+++D L +
Sbjct: 498 ---NDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSR 554
Query: 365 LDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
LD A + + M +KG S P T L+ G
Sbjct: 555 LDEATQMFDSMGSKGFS--PDVVTFTTLING 583
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 144/326 (44%), Gaps = 16/326 (4%)
Query: 64 IP-NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQ 121
IP N +F I+ K + + + A+ TF K+ + G V++ L+ LC V EA
Sbjct: 107 IPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEAL 166
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
F + + N + ++ G + + + M + G+ + +Y
Sbjct: 167 HF---------FHQICKPNVIA-FTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 216
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKG-IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+D MCK G A+ L ++M++ IK +VV Y+ +I + A ++ EM+E
Sbjct: 217 TIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQE 276
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---E 297
G P++ T N +I C +GR EA +L EM ++ PDV+T+ L K E
Sbjct: 277 KGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFE 336
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
L++ M+ GI P TY ++ F + L ++ M GCSPD ++ L+D
Sbjct: 337 AEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILID 396
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAK 383
+D K EM +GL A
Sbjct: 397 GYCGAKRVDDGMKLLHEMSRRGLVAN 422
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 138/312 (44%), Gaps = 24/312 (7%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T TYNS+ID K D + + + M S P+ TF I+ Y A V++ M
Sbjct: 353 TITYNSMIDGFSKQNRLDAAERMFYLMATKGCS-PDVITFSILIDGYCGAKRVDDGMKLL 411
Query: 91 NKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+++ GL + ++Y L+ C+ ++ A +L + + SG+ T N +L
Sbjct: 412 HEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLL----QEMISSGVCPNVVT--CNTLL 465
Query: 150 RGWFKMSWWGKCREFWEEMDK-----------RGVVKDLHSYSIYMDIMCKSGKPWKAVK 198
G E ++ M K V D+ +Y+I + + GK +A +
Sbjct: 466 DGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEE 525
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
LY+EM +G+ D + YN+VI + +D A +++ M G P VVT T+I C
Sbjct: 526 LYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYC 585
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMD 315
+ GRV + V EM ++G V + ITY + I L +F MI SG+ P D
Sbjct: 586 KVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYP--D 643
Query: 316 TYVMLLRKFGRW 327
T + G W
Sbjct: 644 TITIRNMLTGLW 655
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 101/202 (50%), Gaps = 8/202 (3%)
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ ++ + +P + L+++M+ + I ++ ++ +I+ + FA+ + ++ ++G
Sbjct: 83 LGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGF 142
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILG 300
PS+VT +T++ LC RV EA ++ C P+VI + C E + E +
Sbjct: 143 HPSLVTFSTLLHGLCVEDRVSEALHFFHQI----CKPNVIAFTTLMNGLCREGRVVEAVA 198
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG-CSPDEFAYNALVDAL 359
L DRM+E G++P TY ++ + G + +KMEE+ P+ Y+A++D L
Sbjct: 199 LLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGL 258
Query: 360 IDKGMLDMARKYDEEMFAKGLS 381
G A+ EM KG+S
Sbjct: 259 WKDGRQTDAQNLFSEMQEKGIS 280
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 89/198 (44%), Gaps = 10/198 (5%)
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
MFK + + +A FN ++ D +Y L+ L EA+EL + +
Sbjct: 480 MFKVMQKSKMDLDASHPFNDVE----PDVQTYNILICGLINEGKFSEAEEL----YEEMP 531
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
GLV T YN ++ G K S + + ++ M +G D+ +++ ++ CK G+
Sbjct: 532 HRGLVP--DTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGR 589
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
++++ EM ++GI + + Y T+I ++ A+ +++EM G P +T
Sbjct: 590 VGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRN 649
Query: 253 VIKLLCENGRVREAYAVL 270
++ L ++ A L
Sbjct: 650 MLTGLWSKEELKRAVQCL 667
>gi|47848296|dbj|BAD22160.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 454
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 172/391 (43%), Gaps = 26/391 (6%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+ +DWK AL FF W ++ + HT N ++D+LGK + D W L+ M + +
Sbjct: 46 FGDDWKSALGFFQWAQSRDDYRHTAYACNRMVDLLGKMRQIDQMWELLSDM--HGRGLVT 103
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCF 125
T +R A + + F+KL++ GL+ N L+D LC+ + + A+E+
Sbjct: 104 VETVAKSIRRLAGARRWKDVVLLFDKLEDMGLERNTETMNVLLDVLCKERKIEVAREVFA 163
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
+ ++ +N+ + GW + + EEM +RG + +Y+ ++
Sbjct: 164 VLSPHIPPDAYT-------FNIFVHGWCSIRRIDEAMWTIEEMKRRGFPPSVITYTTVLE 216
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
CK + ++ M +G +V+ Y ++ ++ E + A+ V M+ GC+P
Sbjct: 217 AYCKQRNFRRVYEVLDSMGSQGCHPNVITYTMIMTSLAKCERFEEALSVSHRMKSSGCKP 276
Query: 246 SVVTCNTVIKLLCENGRVREAYAVL-AEMPKKGCVPDVITYH------CFFRCLEKPREI 298
+ N++I LL ++G + EA V EMP G ++ TY+ C++ + +
Sbjct: 277 DTLFYNSLINLLGKSGHLFEASQVFRVEMPMNGVSHNLATYNTMISIFCYY---GRDDDA 333
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKF----GRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
L + M +P + +Y LLR F G+ +R + LG D Y
Sbjct: 334 LNVLKEMEAQSCKPDIQSYRPLLRLFLSRRGQADTVRHLLSELTSKHNLGLDLD--TYTL 391
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
L+ L G A + +EM + ++ + +
Sbjct: 392 LIHGLCRVGDTVWAYQLFDEMVSSEIAPRSK 422
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 123/242 (50%), Gaps = 6/242 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK---SGKPWKAVKLYK 201
+N+++ K K R+ E+M G ++ SY+ +D CK +GK +KA + K
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLK 285
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
EM + + ++ +N +I + + +++V++EM + P+V+T N++I LC G
Sbjct: 286 EMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGG 345
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYV 318
++ EA + +M G P++ITYH K +E L +FD + G RP Y
Sbjct: 346 KINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYN 405
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
ML+ + + G + F + ++ME G PD YN L+ L G ++ A+K +++ K
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNK 465
Query: 379 GL 380
GL
Sbjct: 466 GL 467
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 152/322 (47%), Gaps = 22/322 (6%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCE-------YKH 116
PN TF ++ +N+A + +G + VSY L+D C+ YK
Sbjct: 221 PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKA 280
Query: 117 VIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
+E+ E V N T +N+++ G++K + ++EM + V+ +
Sbjct: 281 DAVLKEMVENE---------VSPNLT-TFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPN 330
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
+ +Y+ ++ +C GK +A+ + +M G++ +++ Y+++I + + A+ ++
Sbjct: 331 VITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFD 390
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR 296
++ G +P+ N +I C+ G++ + +A+ EM ++G VPDV TY+C L +
Sbjct: 391 SVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450
Query: 297 EILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
I LFD++ G+ P + T+ +L+ + G R ++ K+M ++G P YN
Sbjct: 451 NIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYN 509
Query: 354 ALVDALIDKGMLDMARKYDEEM 375
++ +G L A +M
Sbjct: 510 IMMKGYCKEGNLKAATNMRTQM 531
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 121/239 (50%), Gaps = 6/239 (2%)
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++ K + ++EM +R + ++ ++++ ++ +CK+GK KA + ++MK G
Sbjct: 194 LMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 208 IKMDVVAYNTVIRA---VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+VV+YNT+I +G + + A V +EM E P++ T N +I ++ +
Sbjct: 254 YSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLP 313
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLL 321
+ V EM + +P+VITY+ L K E +G+ D+M+ +G++P + TY L+
Sbjct: 314 GSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLI 373
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
F + G ++ ++ ++ G P YN L+DA G +D EEM +G+
Sbjct: 374 NGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI 432
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 166/350 (47%), Gaps = 22/350 (6%)
Query: 27 FTHTTDTYNSVIDIL------GKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTA 80
++ +YN++ID GK ++ D ++ M +N S PN TF I+ +
Sbjct: 254 YSPNVVSYNTLIDGYCKLGGNGKMYKADA---VLKEMVENEVS-PNLTTFNILIDGFWKD 309
Query: 81 HLVNEAMGTFNK-LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEM 139
+ ++ F + LD+ + + ++Y +L++ LC + EA + ++ S V+
Sbjct: 310 DNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGM-----RDKMVSAGVQP 364
Query: 140 NKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKL 199
N Y+ ++ G+ K + + ++ + +G Y++ +D CK GK L
Sbjct: 365 NLI-TYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFAL 423
Query: 200 YKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCE 259
+EM+++GI DV YN +I + + ++ A +++ ++ G P +VT + +++ C
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCS 482
Query: 260 NGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPREILGLFDRMIESGIRPKMD-- 315
G R+A +L EM K G P +TY+ + C E + +E R +M+
Sbjct: 483 RGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVA 542
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
+Y +LL+ + + G L ++ +M E G P+ Y + + ++DKG +
Sbjct: 543 SYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKGFV 592
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 168/373 (45%), Gaps = 20/373 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + D +A++ F ++ +C +YN+VI+ L K + L MK P
Sbjct: 140 CQSGDSHKAMDLFCMMKRNCLIPDCV-SYNTVINGLCKGKRLVEAKELFKEMKGGECK-P 197
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELC 124
N TF + + V E G ++++ GL+ +V Y L+ C + +EL
Sbjct: 198 NSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKEL- 256
Query: 125 FGENKNVGFSGLVEMNKTK---IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
F+ ++ N T Y+ ++ K W + + + M V D+ +Y+
Sbjct: 257 --------FNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYT 308
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+ D + K+G+ A+K+ M K+G + + V YN +I + VD A+ + M +
Sbjct: 309 VLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKK 368
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK--GCVPDVITYHCFFRCLEKPREIL 299
G +P VVT +T++K LC G++ EA +L + K PDV ++ + L K R +
Sbjct: 369 GKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLR 428
Query: 300 G---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
++ M+E G + TY +L+ + G L +WK + G SP+ Y L+
Sbjct: 429 HAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLI 488
Query: 357 DALIDKGMLDMAR 369
+ L ML +A+
Sbjct: 489 NGLCKMQMLSIAK 501
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 170/365 (46%), Gaps = 37/365 (10%)
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL- 123
N F ++ K + + ++AM F + L D VSY +++ LC+ K ++EA+EL
Sbjct: 128 NVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELF 187
Query: 124 -------C-------------FGENKNV--GFSGLVEMNKTK------IYNMILRGWFKM 155
C F +N +V GF L EM K +Y+ ++ G+
Sbjct: 188 KEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSK 247
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
+ +E + EM ++ V ++ +YS M+ +CK K +A ++ M ++ DVVAY
Sbjct: 248 GDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAY 307
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
+ + + A++V M + G +P+ VT N +I LC+ GRV +A +L M K
Sbjct: 308 TVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAK 367
Query: 276 KGCVPDVITYHCFFRCL---EKPREILGLFDRMI--ESGIRPKMDTYVMLLRKFGRWGFL 330
KG PDV+TY + L K E + L + ++ E I+P + + +++++ + L
Sbjct: 368 KGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRL 427
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGT 390
R V+ M E G + YN L+D + G L A + ++ G+S P T
Sbjct: 428 RHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGIS--PNAATYT 485
Query: 391 KLVQG 395
L+ G
Sbjct: 486 VLING 490
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 152/349 (43%), Gaps = 20/349 (5%)
Query: 55 HRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYC-NLVDALCE 113
H ++D P+SIP++++ + A + + +K+ V C + AL E
Sbjct: 47 HTLQDYPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASV----SVFPCFTSLSALIE 102
Query: 114 YKHVIEAQELCFGENKNVGFSGLVEMNKTKI----YNMILRGWFKMSWWGKCREFWEEMD 169
+ Q+ F G GL+ + +N++L+G+ + K + + M
Sbjct: 103 --SFVNTQKPSFA----FGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMK 156
Query: 170 KRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVD 229
+ ++ D SY+ ++ +CK + +A +L+KEMK K + V ++ +I + V+
Sbjct: 157 RNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVE 216
Query: 230 FAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF 289
+ EM +MG + V + +I C G + + EM +K P+V+TY C
Sbjct: 217 EGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLM 276
Query: 290 RCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
L +K +E + D M +RP + Y +L + G V M + G
Sbjct: 277 NALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEE 336
Query: 347 PDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
P+ YNA+++ L +G +D A E M KG KP + LV+G
Sbjct: 337 PNNVTYNAIINGLCKEGRVDDALGILETMAKKG--KKPDVVTYSTLVKG 383
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 142/316 (44%), Gaps = 13/316 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++I+ L K D + ++ M P+ T+ + K ++EA+ N
Sbjct: 341 TYNAIINGLCKEGRVDDALGILETMAKKGKK-PDVVTYSTLVKGLCGVGKIDEAVDLLNL 399
Query: 93 L--DEFGLKDEVSYCNLV-DALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
L EF +K +V NLV LC+ + + A+ + + + S +V YN+++
Sbjct: 400 LMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVT------YNILI 453
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G+ K E W++ G+ + +Y++ ++ +CK A L+ + + G +
Sbjct: 454 DGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTR 513
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
V YNT++ ++ V+ A +++EMR P VV+ N +I + G V A +
Sbjct: 514 PTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKEL 573
Query: 270 LAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
L EM VPD IT+ F L + E L++RM+ G P + LL+ +
Sbjct: 574 LLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSL 633
Query: 327 WGFLRPVFVVWKKMEE 342
G V + ++M +
Sbjct: 634 KGKTEKVVSMLQQMAD 649
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 113/270 (41%), Gaps = 16/270 (5%)
Query: 61 PSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIE 119
PS+I T+ I+ Y++A + +A+ + + G+ + +Y L++ LC+ + +
Sbjct: 443 PSNI---VTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSI 499
Query: 120 AQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
A+ L F + + G V YN ++ + S + R ++EM D+ S
Sbjct: 500 AKGL-FNKKRASGTRPTVSE-----YNTLMASLCRESSVEQARNLFQEMRNANHDPDVVS 553
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
++I +D K+G A +L EM + D + ++ +I +D A +Y M
Sbjct: 554 FNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMV 613
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL------E 293
G P V ++++K G+ + ++L +M K V D CL
Sbjct: 614 SCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDV 673
Query: 294 KPREILGLFDRMIESGIRPKMDTYVMLLRK 323
+IL F + G K + +M L K
Sbjct: 674 DIEKILPKFSQHTSVGASIKCNELLMKLNK 703
>gi|357448559|ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 168/387 (43%), Gaps = 30/387 (7%)
Query: 26 HFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNE 85
H T TY +I + GK + D S L M + ++ N + M + + ++
Sbjct: 253 HCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTL-NLIAYNTMIEALAKGRMADK 311
Query: 86 AMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKT-- 142
A+ F+K+ E G + +E +Y L++ L V E Q NK +VEM+K
Sbjct: 312 AVLLFSKMVENGCQPNEFTYSVLLNVL-----VAEGQL-----NK---LDNIVEMSKKYM 358
Query: 143 --KIYNMILRGWFKMSWWGKCREF----WEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKA 196
+IY +R K+ + W DK D +Y ++ +C SGK +A
Sbjct: 359 NKQIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDK----GDKDAYMSMLESLCSSGKIAEA 414
Query: 197 VKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKL 256
+ L +K I D + YNTV A+G + V +Y +M++ G P + T N +I
Sbjct: 415 IDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNILISS 474
Query: 257 LCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGL---FDRMIESGIRPK 313
GRV A + E+ C PDVI+Y+ CL K ++ F M E G+ P
Sbjct: 475 YGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPD 534
Query: 314 MDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDE 373
+ TY L+ FG+ + ++ +M GCSP+ YN L+D L G A
Sbjct: 535 VVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSGRTAEAVDLYA 594
Query: 374 EMFAKGLSAKPREELGTKLVQGGLDGE 400
++ +GL+ + +Q G G+
Sbjct: 595 KLKQQGLTPDSITYAVLERLQSGRHGK 621
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 161/342 (47%), Gaps = 44/342 (12%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI-------------- 72
FT YN++I+ L K D + L +M +N PN T+ +
Sbjct: 289 FTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQ-PNEFTYSVLLNVLVAEGQLNKL 347
Query: 73 -----MFKRYVTAHLVNEAMGTFNKLDEFGLK--------------DEVSYCNLVDALCE 113
M K+Y+ + + T +KL D+ +Y +++++LC
Sbjct: 348 DNIVEMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLCS 407
Query: 114 YKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGV 173
+ EA +L N+ F T +YN + ++ + +E+M + G
Sbjct: 408 SGKIAEAIDLL---NR---FHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGP 461
Query: 174 VKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMR 233
D+ +Y+I + ++G+ AVK+++E++ + DV++YN++I +G + VD A
Sbjct: 462 PPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHM 521
Query: 234 VYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE 293
++EM+E G P VVT +T+I+ + +V A ++ EM +GC P+++TY+ CLE
Sbjct: 522 RFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLE 581
Query: 294 KP---REILGLFDRMIESGIRPKMDTYVMLLR-KFGRWGFLR 331
+ E + L+ ++ + G+ P TY +L R + GR G LR
Sbjct: 582 RSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGRHGKLR 623
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 116/252 (46%), Gaps = 20/252 (7%)
Query: 140 NKTKIYNMILRGWFKMSW---WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKA 196
N IYN + + S + + ++M+KRGV + + +I + G +
Sbjct: 119 NDPFIYNRLFLTLSRSSSQLRFEQTESLLDDMEKRGVKGSISTVNILIGFF---GDLDRC 175
Query: 197 VKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKL 256
V L +KK G++ + +Y +++ D A VY +M G + N ++
Sbjct: 176 VGL---VKKWGLRFNAYSYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDA 232
Query: 257 LCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPK 313
L ++ +V +AY V +M ++ C PD TY R K E L LF M+E G
Sbjct: 233 LAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLN 292
Query: 314 MDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD------- 366
+ Y ++ + +++ KM E GC P+EF Y+ L++ L+ +G L+
Sbjct: 293 LIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNKLDNIVE 352
Query: 367 MARKY-DEEMFA 377
M++KY +++++A
Sbjct: 353 MSKKYMNKQIYA 364
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 111/235 (47%), Gaps = 6/235 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y +L+G+ ++ K + +M + G D+ ++++ +D + K K KA K++++MK
Sbjct: 191 YKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMK 250
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
++ + D Y +IR G + D ++ +++ M E G +++ NT+I+ L +
Sbjct: 251 RRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMAD 310
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIE-SGIRPKMDTYVMLLRK 323
+A + ++M + GC P+ TY L + L D ++E S Y +R
Sbjct: 311 KAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQ-LNKLDNIVEMSKKYMNKQIYAYFVRT 369
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG----MLDMARKYDEE 374
+ G ++ M + D+ AY +++++L G +D+ ++ E+
Sbjct: 370 LSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFHEK 424
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 173/377 (45%), Gaps = 13/377 (3%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A + F+ + D ++ Y +++ + +++ + + +M ++ S P T+ +M
Sbjct: 193 ASKLFDVIPLD-DYSLDVRAYTTILHSYSRCGKYERAVAIFEKMNESGLS-PTLVTYNVM 250
Query: 74 FKRY-VTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
Y N+ +G +++ GL + C+ V + C + +++ + F K+ G
Sbjct: 251 LDVYGKMGRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQG 310
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
++ T YN +L+ + K + + +EM+ D +Y+ + ++G
Sbjct: 311 YAP-----GTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGF 365
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
+ L M + GIK + V Y T+I A G + VD A+ +Y +M+E GC P+V T N
Sbjct: 366 YEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNA 425
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR-CLEKP--REILGLFDRMIESG 309
++ +L + + E +L +M GC P+ IT++ C K + + +F M G
Sbjct: 426 ILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCG 485
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
P DT+ L+ GR G ++ +M E G +P YNAL++AL +G A
Sbjct: 486 FEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAE 545
Query: 370 KYDEEMFAKGLSAKPRE 386
++M KG KP E
Sbjct: 546 SVIKDMKNKGF--KPSE 560
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 160/366 (43%), Gaps = 22/366 (6%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A EFF +++ + T TYN+++ + GK + + +++ M+DN + P+ T+ +
Sbjct: 299 AKEFFVGLKSQGYAPGTV-TYNALLQVFGKAGIYSEALSIMKEMEDN-NCPPDAVTYNEL 356
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
YV A E + + E G+K + V+Y +++A V +A L + + K G
Sbjct: 357 VAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSL-YDQMKESG 415
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
+ V YN IL K S + + +M G + +++ + + G
Sbjct: 416 CAPNV-----CTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGM 470
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
++++EMK G + D +NT+I A G A ++Y EM E G PSV T N
Sbjct: 471 HKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNA 530
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRP 312
++ L G R A +V+ +M KG P +Y K + G+ IE I
Sbjct: 531 LLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGI--NRIEKDI-- 586
Query: 313 KMDTYV----MLLRKFGRWGF----LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
D ++ MLLR F L + ++ +++ G PD +N+++ K M
Sbjct: 587 -YDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNM 645
Query: 365 LDMARK 370
D A +
Sbjct: 646 HDRAHE 651
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 149/382 (39%), Gaps = 52/382 (13%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN+++ +LGK + + ++ MK + + PN T+ M + F +
Sbjct: 422 TYNAILGMLGKKSQSEEMMKILCDMKVDGCA-PNRITWNTMLSMCGNKGMHKYVKRVFQE 480
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G + D ++ L+ A I+A+++ + E GF+ V YN +L
Sbjct: 481 MKSCGFEPDRDTFNTLITASGRCGSDIDAEKI-YDEMLEAGFTPSV-----ATYNALLNA 534
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG------------------KP 193
+ W ++M +G SYS+ ++ K G
Sbjct: 535 LARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPS 594
Query: 194 WKAVKL-----------------YKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
W ++ ++ ++K G K D+V +N+++ D A +
Sbjct: 595 WMLLRTLILANFKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMH 654
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP- 295
++E G QP +VT N+++ L G +A +L E+ G D+I+Y+ + +
Sbjct: 655 LIQECGLQPDLVTYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQG 714
Query: 296 --REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
E L MI GIRP + TY + + G + V M + C P+E Y
Sbjct: 715 LMHEALRTLSEMISRGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYK 774
Query: 354 ALVDALIDKGMLDMARKYDEEM 375
+VD A+K+ E M
Sbjct: 775 IVVDGYCK------AKKFKEAM 790
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 123/264 (46%), Gaps = 16/264 (6%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
FT + TYN++++ L + ++ + ++I MK N P+ ++ ++ Y V
Sbjct: 521 FTPSVATYNALLNALARRGDWRTAESVIKDMK-NKGFKPSETSYSLILNSYAKGGYVK-- 577
Query: 87 MGTFNKLDEFGLKDEV--SYCNL-VDALCEYK-HVIEAQELCFGENKNVGF-SGLVEMNK 141
N++++ + S+ L L +K + E F + G+ LV
Sbjct: 578 --GINRIEKDIYDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQKHGYKPDLV---- 631
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
++N +L + + + + E + + G+ DL +Y+ MD+ + G+ WKA ++ +
Sbjct: 632 --VFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGECWKAEEILR 689
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
E++ G K D+++YNTVI+ + A+R EM G +P +VT NT + G
Sbjct: 690 ELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIRPCIVTYNTFVGGYAAKG 749
Query: 262 RVREAYAVLAEMPKKGCVPDVITY 285
E VL+ M K C P+ +TY
Sbjct: 750 MFAEIDEVLSYMTKHDCRPNELTY 773
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 95/228 (41%), Gaps = 14/228 (6%)
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
D + + I+ + + A KL+ + +DV AY T++ + + A+ ++
Sbjct: 173 DNQAVELMARILGRESQHSIASKLFDVIPLDDYSLDVRAYTTILHSYSRCGKYERAVAIF 232
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRV-REAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
+M E G P++VT N ++ + + GR + +L EM KG D T C
Sbjct: 233 EKMNESGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSKGLGFDEFT--CSTVISAC 290
Query: 295 PREILGLFDRMIE-------SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
RE GL D E G P TY LL+ FG+ G + K+ME+ C P
Sbjct: 291 GRE--GLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPP 348
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
D YN LV A + G + + M G+ KP T ++
Sbjct: 349 DAVTYNELVAAYVRAGFYEEGAALIDTMTENGI--KPNAVTYTTMINA 394
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 115/265 (43%), Gaps = 8/265 (3%)
Query: 25 CHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVN 84
C F DT+N++I G+ D+ I+ P+ AT+ +
Sbjct: 484 CGFEPDRDTFNTLITASGRCGS-DIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWR 542
Query: 85 EAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK 143
A + G K E SY ++++ + +V + K++ + G + +
Sbjct: 543 TAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRI----EKDI-YDGHIFPSWML 597
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+ +IL + + G R F + + K G DL ++ + + + +A ++ +
Sbjct: 598 LRTLILANFKCRALAGMERAF-QALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLI 656
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
++ G++ D+V YN+++ A + RE++ G + +++ NTVIK C G +
Sbjct: 657 QECGLQPDLVTYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLM 716
Query: 264 REAYAVLAEMPKKGCVPDVITYHCF 288
EA L+EM +G P ++TY+ F
Sbjct: 717 HEALRTLSEMISRGIRPCIVTYNTF 741
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 162/337 (48%), Gaps = 15/337 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++I L K + L++ M+ PN T+ I+ R+ + EA ++
Sbjct: 16 TYNTLILGLCKKGYLVSARELMNEMQIKGCE-PNVITYTILIDRFCKEGRLEEARNVLDE 74
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY--NMIL 149
+ GL + V Y L+ ALC+ + V +A + FG+ + G K I+ N ++
Sbjct: 75 MSGKGLALNAVGYNCLISALCKDEKVQDALNM-FGDMSSKGC-------KPDIFTFNSLI 126
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G K++ + + +++M GV+ + +Y+ + + G +A+KL +M +G
Sbjct: 127 FGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCP 186
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
+D + YN +I+A+ + ++ + ++ +M G P+ ++CN +I LC G ++ A
Sbjct: 187 LDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEF 246
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
L +M +G PD++TY+ L K +E L LFD++ GI P TY L+ +
Sbjct: 247 LRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCK 306
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
G ++ + + G P+E + LV I +G
Sbjct: 307 EGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 343
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 120/241 (49%), Gaps = 5/241 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G K + RE EM +G ++ +Y+I +D CK G+ +A + EM
Sbjct: 17 YNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS 76
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
KG+ ++ V YN +I A+ E V A+ ++ +M GC+P + T N++I LC+ +
Sbjct: 77 GKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFE 136
Query: 265 EAYAVLAEMPKKGCVPDVITY----HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVML 320
EA + +M +G + + ITY H F R +E L L + M+ G TY L
Sbjct: 137 EALGLYQDMLLEGVIANTITYNTLIHAFLR-RGAMQEALKLVNDMLFRGCPLDDITYNGL 195
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
++ R G + +++ M G +P+ + N L++ L G + A ++ +M +GL
Sbjct: 196 IKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGL 255
Query: 381 S 381
+
Sbjct: 256 T 256
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 106/219 (48%), Gaps = 3/219 (1%)
Query: 166 EEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVS 225
E M G D+ +Y+ + +CK G A +L EM+ KG + +V+ Y +I
Sbjct: 3 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 62
Query: 226 EGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
++ A V EM G + V N +I LC++ +V++A + +M KGC PD+ T+
Sbjct: 63 GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 122
Query: 286 HC--FFRC-LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE 342
+ F C + K E LGL+ M+ G+ TY L+ F R G ++ + M
Sbjct: 123 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 182
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
GC D+ YN L+ AL G ++ E+M +KGL+
Sbjct: 183 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLN 221
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 9/156 (5%)
Query: 234 VYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--C 291
++ M +GC P + T NT+I LC+ G + A ++ EM KGC P+VITY C
Sbjct: 1 MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60
Query: 292 ----LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
LE+ R +L D M G+ Y L+ + ++ ++ M GC P
Sbjct: 61 KEGRLEEARNVL---DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKP 117
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAK 383
D F +N+L+ L + A ++M +G+ A
Sbjct: 118 DIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIAN 153
>gi|297599556|ref|NP_001047351.2| Os02g0601600 [Oryza sativa Japonica Group]
gi|255671066|dbj|BAF09265.2| Os02g0601600 [Oryza sativa Japonica Group]
Length = 466
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 172/391 (43%), Gaps = 26/391 (6%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+ +DWK AL FF W ++ + HT N ++D+LGK + D W L+ M + +
Sbjct: 58 FGDDWKSALGFFQWAQSRDDYRHTAYACNRMVDLLGKMRQIDQMWELLSDM--HGRGLVT 115
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCF 125
T +R A + + F+KL++ GL+ N L+D LC+ + + A+E+
Sbjct: 116 VETVAKSIRRLAGARRWKDVVLLFDKLEDMGLERNTETMNVLLDVLCKERKIEVAREVFA 175
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
+ ++ +N+ + GW + + EEM +RG + +Y+ ++
Sbjct: 176 VLSPHIPPDAYT-------FNIFVHGWCSIRRIDEAMWTIEEMKRRGFPPSVITYTTVLE 228
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
CK + ++ M +G +V+ Y ++ ++ E + A+ V M+ GC+P
Sbjct: 229 AYCKQRNFRRVYEVLDSMGSQGCHPNVITYTMIMTSLAKCERFEEALSVSHRMKSSGCKP 288
Query: 246 SVVTCNTVIKLLCENGRVREAYAVL-AEMPKKGCVPDVITYH------CFFRCLEKPREI 298
+ N++I LL ++G + EA V EMP G ++ TY+ C++ + +
Sbjct: 289 DTLFYNSLINLLGKSGHLFEASQVFRVEMPMNGVSHNLATYNTMISIFCYY---GRDDDA 345
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKF----GRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
L + M +P + +Y LLR F G+ +R + LG D Y
Sbjct: 346 LNVLKEMEAQSCKPDIQSYRPLLRLFLSRRGQADTVRHLLSELTSKHNLGLDLD--TYTL 403
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
L+ L G A + +EM + ++ + +
Sbjct: 404 LIHGLCRVGDTVWAYQLFDEMVSSEIAPRSK 434
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 175/411 (42%), Gaps = 47/411 (11%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
+N W A FF + ET + TYN +I I + +FD + L++ M + S P+
Sbjct: 127 SNKWDEAESFFLYFET-MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFS-PDV 184
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFG 126
++ + +++A+ F+++ E G+ +V+ Y L+D + ++ A E+
Sbjct: 185 FSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIW-- 242
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
G YN+++ G K + + E W M K +DL++YS +
Sbjct: 243 ---ERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHG 299
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+C SG A ++YKEM + G+ DVV YNT++ + ++ + +++ M + GC+ +
Sbjct: 300 LCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-T 358
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL-------------- 292
VV+ N +I+ L EN +V EA ++ +P+K C D +TY L
Sbjct: 359 VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILE 418
Query: 293 --EKPR----------------------EILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
E R E+ G+ D+M + G +P ++ F R
Sbjct: 419 EAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRAS 478
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L + M GC P YN L++ L A +EM KG
Sbjct: 479 KLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKG 529
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 160/336 (47%), Gaps = 14/336 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
PN T+ I+ K ++A N + E G +V SY L+++L + ++ +A +L
Sbjct: 147 PNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKL 206
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDK-RGVVKDLHSYSI 182
F E G + V YN+++ G+FK E WE + K V ++ SY++
Sbjct: 207 -FDEMPERGVTPDV-----ACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNV 260
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ +CK GK ++ +++ MKK D+ Y+T+I + S +D A RVY+EM E G
Sbjct: 261 MINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENG 320
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREIL 299
P VV NT++ GR+ E + M K+GC V++Y+ R L K E +
Sbjct: 321 VSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEAI 379
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+++ + E TY +L+ + G+L + ++ E D FAY+++++ L
Sbjct: 380 SIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGL 439
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+G LD ++M G KP + ++ G
Sbjct: 440 CREGRLDEVAGVLDQMTKHG--CKPNPHVCNAVING 473
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 154/347 (44%), Gaps = 12/347 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+YN +I+ L K +FD S+ + HRMK N + T+ + + ++ A + +
Sbjct: 257 SYNVMINGLCKCGKFDESFEIWHRMKKNERG-QDLYTYSTLIHGLCGSGNLDGATRVYKE 315
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G+ D V Y +++ + E EL K G +V YN+++RG
Sbjct: 316 MAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKE-GCRTVVS------YNILIRG 368
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
F+ + + WE + ++ D +Y + + +CK+G KA+ + +E + +D
Sbjct: 369 LFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLD 428
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
AY+++I + +D V +M + GC+P+ CN VI ++ +A
Sbjct: 429 TFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFG 488
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M KGC P V+TY+ L K E L M+ G +P M TY +L+ +
Sbjct: 489 NMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGK 548
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
L +W + E G PD +N ++ L G ++ A + EM
Sbjct: 549 KLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM 595
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 152/333 (45%), Gaps = 16/333 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+++I L D + + M +N S P+ + M Y+ A + E + +
Sbjct: 292 TYSTLIHGLCGSGNLDGATRVYKEMAENGVS-PDVVVYNTMLNGYLRAGRIEECLELWKV 350
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIYNMIL 149
+++ G + VSY L+ L E V EA + + L E + + Y +++
Sbjct: 351 MEKEGCRTVVSYNILIRGLFENAKVDEAISI---------WELLPEKDCCADSMTYGVLV 401
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G K + K EE + D +YS ++ +C+ G+ + + +M K G K
Sbjct: 402 HGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCK 461
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
+ N VI + ++ A+R + M GC P+VVT NT+I L + R EAYA+
Sbjct: 462 PNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYAL 521
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGR 326
+ EM KG P++ITY L + +++ L L+ + +E G +P + + +++
Sbjct: 522 VKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCS 581
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
G + ++ +M++ C P+ +N L++
Sbjct: 582 SGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGF 614
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 111/225 (49%), Gaps = 3/225 (1%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+ N ++ G+ + S F+ M +G + +Y+ ++ + K+ + +A L KEM
Sbjct: 466 VCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 525
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
KG K +++ Y+ ++ + + +D A+ ++ + E G +P V N +I LC +G+V
Sbjct: 526 LHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKV 585
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVML 320
+A + +EM ++ CVP+++T++ K R+ ++D +++ G +P + +Y +
Sbjct: 586 EDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNIT 645
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
L+ + + G P +N LV A++D G L
Sbjct: 646 LKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGAL 690
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 114/239 (47%), Gaps = 5/239 (2%)
Query: 148 ILRGWFKMSWWGKCREFWEEMDKR-GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
+++ + K S + + ++ M + G + SY+ ++ + +S K +A + +
Sbjct: 84 VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 143
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
G+ ++ YN +I+ + D A + M E G P V + T+I L +NG + +A
Sbjct: 144 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDA 203
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIES-GIRPKMDTYVMLLR 322
+ EMP++G PDV Y+ K +IL +++R+++ + P + +Y +++
Sbjct: 204 LKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMIN 263
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ G F +W +M++ D + Y+ L+ L G LD A + +EM G+S
Sbjct: 264 GLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 322
>gi|357142780|ref|XP_003572691.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Brachypodium distachyon]
Length = 501
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 165/391 (42%), Gaps = 20/391 (5%)
Query: 4 LSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
LS + +DWK AL F W ++ ++ HT + +ID+LGK + D W+L+ M
Sbjct: 90 LSKFGDDWKSALGLFQWAQSSGNYKHTAYACSRMIDLLGKMRQIDQMWDLLSDMHCRGLV 149
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQE 122
A I +R A +A+ F+KL + GL+ N L+DALC+ K V A++
Sbjct: 150 TVEAAATSI--RRLAGARRWKDAVLLFDKLGDMGLERNTETMNVLLDALCKEKKVEVARK 207
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ + ++ +N+ + GW + EEM +G + +Y+
Sbjct: 208 VFLVLSPHIQPDAYT-------FNIFVHGWCSARRIDEAMWTIEEMKAQGFPPSVITYTT 260
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ CK ++ M +G +V+ Y ++ ++ + A+ V M+ G
Sbjct: 261 VLEAYCKQHNFRMVYEILDSMSSEGCHPNVITYTMIMTSLAKCHMFEEALSVSHRMKSSG 320
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVL-AEMPKKGCVPDVITYHCFFRCL---EKPREI 298
C+P + N++I LL + G + EA V EMP G + TY+ + +
Sbjct: 321 CKPDTLFYNSLINLLGKAGHLSEASQVFQVEMPMNGVPRSLATYNTMISVFCYKDLDEDA 380
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKF----GRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
L + M +P + TY LLR F G+ +R + LG D Y
Sbjct: 381 LSVLKEMETQSCKPDLQTYRPLLRLFLSRRGQDDTVRNLLNELMNKHSLGLDLD--TYTL 438
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
L+ L G D A + +EM + + R
Sbjct: 439 LIHGLCRVGETDWAYRLFDEMVGSEIVPRYR 469
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 93/232 (40%), Gaps = 9/232 (3%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F + TY +V++ K F + + ++ M PN T+ ++ H+ EA
Sbjct: 251 FPPSVITYTTVLEAYCKQHNFRMVYEILDSMSSEGCH-PNVITYTMIMTSLAKCHMFEEA 309
Query: 87 MGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
+ +++ G K D + Y +L++ L + H+ EA ++ E G Y
Sbjct: 310 LSVSHRMKSSGCKPDTLFYNSLINLLGKAGHLSEASQVFQVEMPMNGVP-----RSLATY 364
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI-MCKSGKPWKAVKLYKE-M 203
N ++ + +EM+ + DL +Y + + + + G+ L E M
Sbjct: 365 NTMISVFCYKDLDEDALSVLKEMETQSCKPDLQTYRPLLRLFLSRRGQDDTVRNLLNELM 424
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
K + +D+ Y +I + D+A R++ EM P TC ++
Sbjct: 425 NKHSLGLDLDTYTLLIHGLCRVGETDWAYRLFDEMVGSEIVPRYRTCELLLS 476
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 177/370 (47%), Gaps = 19/370 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N VI+ F+ L+ +++ +M P+ T + + + V++A+ +K
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYE-PDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G K D V+Y ++D+LC+ K V +A + F E + G V Y ++ G
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF-FKEIERKGIRPNVV-----TYTALVNG 234
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
S W +M K+ + ++ +YS +D K+GK +A +L++EM + I D
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+V Y++++ + + + +D A +++ M GC VV+ NT+I C+ RV + +
Sbjct: 295 IVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354
Query: 272 EMPKKGCVPDVITYHC----FFRC--LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
EM ++G V + +TY+ FF+ ++K +E F +M GI P + TY +LL
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE---FFSQMDFFGISPDIWTYNILLGGLC 411
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
G L V+++ M++ D Y ++ + G ++ A + KGL KP
Sbjct: 412 DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL--KPD 469
Query: 386 EELGTKLVQG 395
T ++ G
Sbjct: 470 IVTYTTMMSG 479
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 138/276 (50%), Gaps = 15/276 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDIL---GKFFEFDLSWNLIHRMKDNPS 62
C ++ W A + + T TY++++D GK E + + RM +P
Sbjct: 236 CNSSRWSDAARLLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQ 121
+ T+ + ++EA F+ + G L D VSY L++ C+ K V +
Sbjct: 295 IV----TYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
+L F E G ++ T YN +++G+F+ K +EF+ +MD G+ D+ +Y+
Sbjct: 351 KL-FREMSQRGL-----VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
I + +C +G+ KA+ ++++M+K+ + +D+V Y TVIR + + V+ A ++ +
Sbjct: 405 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
G +P +VT T++ LC G + E A+ +M ++G
Sbjct: 465 GLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 115/241 (47%), Gaps = 3/241 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+N +L K+ + ++M+ G+ DL++++I ++ C + A+ + +M
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K G + D V +++ V A+ + +M E+G +P +V N +I LC+ RV
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLL 321
+A+ E+ +KG P+V+TY L + + L MI+ I P + TY LL
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
F + G + ++++M + PD Y++LV+ L +D A + + M +KG
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 382 A 382
A
Sbjct: 328 A 328
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 11/239 (4%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+ + +M K + ++ + + K K + L K+M+ GI+ D+ +N VI
Sbjct: 71 DLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCF 130
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
V A+ + +M ++G +P VT +++ C RV +A +++ +M + G PD+
Sbjct: 131 CCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDI 190
Query: 283 ITYHCFFRCLEKPREILGLFDRMIE---SGIRPKMDTYVMLLRKF---GRWGFLRPVFVV 336
+ Y+ L K + + FD E GIRP + TY L+ RW +
Sbjct: 191 VAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS---DAARL 247
Query: 337 WKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
M + +P+ Y+AL+DA + G + A++ EEM +S P + LV G
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR--MSIDPDIVTYSSLVNG 304
>gi|356555026|ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Glycine max]
Length = 587
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 175/398 (43%), Gaps = 28/398 (7%)
Query: 4 LSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMK----- 58
LS Y + FF W+++ H++H+ ++I IL + F + +++ ++
Sbjct: 47 LSLYGYGLSHSFPFFKWLDSIPHYSHSLQCSWAMIHILTEHKHFKTAQHVLEKIAHKDFL 106
Query: 59 DNPSSIP-----------NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN- 106
+PS + N + Y + + +A+ F ++ +K + C
Sbjct: 107 SSPSVLSTLVRTHDNQEVNSQVLSWLVIHYAKSKMTQDAIQVFEQMRLHEVKPHLHACTV 166
Query: 107 LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE 166
L+++L + + + K + G+V IYN + K + +
Sbjct: 167 LLNSLLKDG----VTHMVWKIYKRMVQVGVVP--NIYIYNCLFHACSKSGDVERAEQLLN 220
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
EMD +GV++D+ +Y+ + + CK G ++A+ + M+++GI +D+V+YN++I
Sbjct: 221 EMDVKGVLQDIFTYNTLLSLYCKKGMHYEALSIQNRMEREGINLDIVSYNSLIYGFCKEG 280
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
+ AMR++ E++ P+ VT T+I C+ + EA + M KG P V+TY+
Sbjct: 281 RMREAMRMFSEIK--NATPNHVTYTTLIDGYCKTNELEEALKMCKLMEAKGLYPGVVTYN 338
Query: 287 CFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
R L + R+ L + M E ++ T L+ + + G L+ KM E
Sbjct: 339 SILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTLINAYCKIGDLKSALKFKNKMLEA 398
Query: 344 GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G PD F Y AL+ L+ A++ M G +
Sbjct: 399 GLKPDPFTYKALIHGFCKTNELESAKELMFSMLDAGFT 436
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 144/340 (42%), Gaps = 20/340 (5%)
Query: 60 NPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN--LVDALCEYKHV 117
N S++ + +++ + + + ++ + F LD C+ ++ L E+KH
Sbjct: 31 NASALTSSTIHKVLLQLSLYGYGLSHSFPFFKWLDSIPHYSHSLQCSWAMIHILTEHKHF 90
Query: 118 IEAQELC-------FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGK-----CREFW 165
AQ + F + +V S LV + + N + W + + + +
Sbjct: 91 KTAQHVLEKIAHKDFLSSPSV-LSTLVRTHDNQEVNSQVLSWLVIHYAKSKMTQDAIQVF 149
Query: 166 EEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVS 225
E+M V LH+ ++ ++ + K G K+YK M + G+ ++ YN + A S
Sbjct: 150 EQMRLHEVKPHLHACTVLLNSLLKDGVTHMVWKIYKRMVQVGVVPNIYIYNCLFHACSKS 209
Query: 226 EGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
V+ A ++ EM G + T NT++ L C+ G EA ++ M ++G D+++Y
Sbjct: 210 GDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEALSIQNRMEREGINLDIVSY 269
Query: 286 HCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE 342
+ C E + RE + +F + P TY L+ + + L + K ME
Sbjct: 270 NSLIYGFCKEGRMREAMRMFSEI--KNATPNHVTYTTLIDGYCKTNELEEALKMCKLMEA 327
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
G P YN+++ L G + A K EM + L A
Sbjct: 328 KGLYPGVVTYNSILRKLCQDGRIRDANKLLNEMSERKLQA 367
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 140/341 (41%), Gaps = 19/341 (5%)
Query: 51 WNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVD 109
W + RM +PN + +F + V A N++D G L+D +Y L+
Sbjct: 181 WKIYKRMVQ-VGVVPNIYIYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLS 239
Query: 110 ALCE---YKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE 166
C+ + + Q E N+ YN ++ G+ K + +
Sbjct: 240 LYCKKGMHYEALSIQNRMEREGINLDIVS---------YNSLIYGFCKEGRMREAMRMFS 290
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
E+ + + +Y+ +D CK+ + +A+K+ K M+ KG+ VV YN+++R +
Sbjct: 291 EI--KNATPNHVTYTTLIDGYCKTNELEEALKMCKLMEAKGLYPGVVTYNSILRKLCQDG 348
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
+ A ++ EM E Q +TCNT+I C+ G ++ A +M + G PD TY
Sbjct: 349 RIRDANKLLNEMSERKLQADNITCNTLINAYCKIGDLKSALKFKNKMLEAGLKPDPFTYK 408
Query: 287 CFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
K E+ L M+++G P TY ++ + + + V + +
Sbjct: 409 ALIHGFCKTNELESAKELMFSMLDAGFTPSYCTYSWIVDGYNKKDNMDAVLALPDEFLSR 468
Query: 344 GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
G D Y AL+ + + A + M KG+S +
Sbjct: 469 GICLDVSVYRALIRSSCKVERIQCAERLFYHMEGKGISGES 509
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 106/257 (41%), Gaps = 8/257 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY ++ID K E + + + ++ + P T+ + ++ + +A N+
Sbjct: 301 TYTTLIDGYCKTNELEEALKMC-KLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNE 359
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E L+ + CN L++A C+ + A + +NK + +GL T Y ++ G
Sbjct: 360 MSERKLQADNITCNTLINAYCKIGDLKSALKF---KNKMLE-AGLKPDPFT--YKALIHG 413
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ K + +E M G +YS +D K + L E +GI +D
Sbjct: 414 FCKTNELESAKELMFSMLDAGFTPSYCTYSWIVDGYNKKDNMDAVLALPDEFLSRGICLD 473
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V Y +IR+ E + A R++ M G V ++ G V A ++L
Sbjct: 474 VSVYRALIRSSCKVERIQCAERLFYHMEGKGISGESVIYTSIAYAYWNVGNVSAASSMLE 533
Query: 272 EMPKKGCVPDVITYHCF 288
EM ++ + V Y CF
Sbjct: 534 EMARRRLMITVKLYRCF 550
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 164/355 (46%), Gaps = 14/355 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
++N V++ L K + + + ++I MK S PN T+ + Y + +
Sbjct: 157 SFNIVVNGLCKVGKLNRAGDVIEDMKVWGVS-PNVITYNTLIDGYCKMGRIGKMYKADAI 215
Query: 93 LDEFGLK----DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
L E K +EV+Y L+D C+ ++V A + FGE + G V YN++
Sbjct: 216 LKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRV-FGEMQRQGLRPNV-----VTYNIL 269
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G + ++M + ++ ++++ ++ CK+ +A+ L+ +M+K+G+
Sbjct: 270 INGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGV 329
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ + Y T+I A ++ A +Y M + G P V T N +I LC G V+ A +
Sbjct: 330 DPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARS 389
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
++ EM K DV+TY+ L K R+ + L D M E G+ P TY L+ +
Sbjct: 390 LMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYC 449
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
R G LR +V +ME G + +N L+ KG L+ A EM +GL
Sbjct: 450 REGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGL 504
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 130/278 (46%), Gaps = 41/278 (14%)
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N +L G K S G + EM KR + ++ S++I ++ +CK GK +A + ++MK
Sbjct: 124 NPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKV 183
Query: 206 KGIKMDVVAYNTVIR----------------------AVGV----------------SEG 227
G+ +V+ YNT+I A G+ E
Sbjct: 184 WGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDEN 243
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
V AMRV+ EM+ G +P+VVT N +I LC +G+V EA A+ +M P+V+T++
Sbjct: 244 VSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNV 303
Query: 288 FFR--CLEKP-REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
C K E + LF+ M + G+ P TY L+ + + G + F ++ M + G
Sbjct: 304 LINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRG 363
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
P+ YN L+ L KG + AR EM +K LSA
Sbjct: 364 IFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSA 401
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 126/258 (48%), Gaps = 14/258 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN +I+ L + D + L +M + PN T ++ + VNEA+ FN
Sbjct: 265 TYNILINGLCSDGKVDEAVALRDQMVSSDLE-PNVVTHNVLINGFCKNKTVNEAINLFND 323
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIYNMI 148
+++ G+ + ++Y L+DA C+ + +A L ++ +++ + YN +
Sbjct: 324 MEKQGVDPNAMTYTTLIDAYCKDGRMEDAFAL---------YNMMIDRGIFPEVSTYNCL 374
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G + R EM + + D+ +Y+I +D +CK G+ KAVKL EM +KG+
Sbjct: 375 IAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGL 434
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
V YNT++ + A+ V M G Q +VVT N +IK C GR+ +A
Sbjct: 435 NPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANG 494
Query: 269 VLAEMPKKGCVPDVITYH 286
+L EM ++G VP+ TY
Sbjct: 495 LLNEMLERGLVPNRTTYE 512
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 149/343 (43%), Gaps = 55/343 (16%)
Query: 33 TYNSVID------ILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
TYN++ID +GK ++ D I + PN T+ I+ + V+ A
Sbjct: 192 TYNTLIDGYCKMGRIGKMYKADA----ILKEMVAKGICPNEVTYNILIDGFCKDENVSGA 247
Query: 87 MGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
M F ++ GL+ + V+Y L++ LC V EA L ++ S +E N +
Sbjct: 248 MRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVAL-----RDQMVSSDLEPNVVT-H 301
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK---- 201
N+++ G+ K + + +M+K+GV + +Y+ +D CK G+ A LY
Sbjct: 302 NVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMID 361
Query: 202 -------------------------------EMKKKGIKMDVVAYNTVIRAVGVSEGVDF 230
EM K + DVV YN +I ++
Sbjct: 362 RGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRK 421
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR 290
A+++ EM E G PS VT NT++ C G +R A V M +KG +V+T++ +
Sbjct: 422 AVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIK 481
Query: 291 --CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
CL+ + + GL + M+E G+ P TY ++ + GF+
Sbjct: 482 GFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKGFV 524
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 184/433 (42%), Gaps = 49/433 (11%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
+N W A FF + ET + TYN +I I + +FD + L++ M + S P+
Sbjct: 127 SNKWDEAESFFLYFET-MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFS-PDV 184
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFG 126
++ + +++A+ F+++ E G+ +V+ Y L+D + ++ A E+
Sbjct: 185 FSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIW-- 242
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
G YN+++ G K + + E W M K +DL++YS +
Sbjct: 243 ---ERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHG 299
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+C SG A ++YKEM + G+ DVV YNT++ + ++ + +++ M + GC+ +
Sbjct: 300 LCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-T 358
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL-------------- 292
VV+ N +I+ L EN +V EA ++ +P+K C D +TY L
Sbjct: 359 VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILE 418
Query: 293 --EKPR----------------------EILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
E R E+ G+ D+M + G +P ++ F R
Sbjct: 419 EAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRAS 478
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREEL 388
L + M GC P YN L++ L A +EM KG KP
Sbjct: 479 KLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGW--KPNMIT 536
Query: 389 GTKLVQGGLDGEQ 401
+ L+ G G++
Sbjct: 537 YSLLMNGLCQGKK 549
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 176/368 (47%), Gaps = 15/368 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+YNS+++ L + ++D + + + S PN T+ I+ K ++A N
Sbjct: 116 SYNSLLNALIESNKWDEAESFFLYFETMGLS-PNLQTYNILIKISCRKKQFDKAKELLNW 174
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G +V SY L+++L + ++ +A +L F E G + V YN+++ G
Sbjct: 175 MWEQGFSPDVFSYGTLINSLAKNGYMSDALKL-FDEMPERGVTPDV-----ACYNILIDG 228
Query: 152 WFKMSWWGKCREFWEEMDK-RGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
+FK E WE + K V ++ SY++ ++ +CK GK ++ +++ MKK
Sbjct: 229 FFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ 288
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
D+ Y+T+I + S +D A RVY+EM E G P VV NT++ GR+ E +
Sbjct: 289 DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELW 348
Query: 271 AEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
M K+GC V++Y+ R L K E + +++ + E TY +L+ +
Sbjct: 349 KVMEKEGC-RTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKN 407
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREE 387
G+L + ++ E D FAY+++++ L +G LD ++M G KP
Sbjct: 408 GYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHG--CKPNPH 465
Query: 388 LGTKLVQG 395
+ ++ G
Sbjct: 466 VCNAVING 473
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 154/347 (44%), Gaps = 12/347 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+YN +I+ L K +FD S+ + HRMK N + T+ + + ++ A + +
Sbjct: 257 SYNVMINGLCKCGKFDESFEIWHRMKKNERG-QDLYTYSTLIHGLCGSGNLDGATRVYKE 315
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G+ D V Y +++ + E EL K G +V YN+++RG
Sbjct: 316 MAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKE-GCRTVVS------YNILIRG 368
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
F+ + + WE + ++ D +Y + + +CK+G KA+ + +E + +D
Sbjct: 369 LFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLD 428
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
AY+++I + +D V +M + GC+P+ CN VI ++ +A
Sbjct: 429 TFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFG 488
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M KGC P V+TY+ L K E L M+ G +P M TY +L+ +
Sbjct: 489 NMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGK 548
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
L +W + E G PD +N ++ L G ++ A + EM
Sbjct: 549 KLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM 595
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 152/333 (45%), Gaps = 16/333 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+++I L D + + M +N S P+ + M Y+ A + E + +
Sbjct: 292 TYSTLIHGLCGSGNLDGATRVYKEMAENGVS-PDVVVYNTMLNGYLRAGRIEECLELWKV 350
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIYNMIL 149
+++ G + VSY L+ L E V EA + + L E + + Y +++
Sbjct: 351 MEKEGCRTVVSYNILIRGLFENAKVDEAISI---------WELLPEKDCCADSMTYGVLV 401
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G K + K EE + D +YS ++ +C+ G+ + + +M K G K
Sbjct: 402 HGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCK 461
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
+ N VI + ++ A+R + M GC P+VVT NT+I L + R EAYA+
Sbjct: 462 PNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYAL 521
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGR 326
+ EM KG P++ITY L + +++ L L+ + +E G +P + + +++
Sbjct: 522 VKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCS 581
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
G + ++ +M++ C P+ +N L++
Sbjct: 582 SGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGF 614
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 114/239 (47%), Gaps = 5/239 (2%)
Query: 148 ILRGWFKMSWWGKCREFWEEMDKR-GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
+++ + K S + + ++ M + G + SY+ ++ + +S K +A + +
Sbjct: 84 VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 143
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
G+ ++ YN +I+ + D A + M E G P V + T+I L +NG + +A
Sbjct: 144 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDA 203
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIES-GIRPKMDTYVMLLR 322
+ EMP++G PDV Y+ K +IL +++R+++ + P + +Y +++
Sbjct: 204 LKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMIN 263
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ G F +W +M++ D + Y+ L+ L G LD A + +EM G+S
Sbjct: 264 GLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 322
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 82/154 (53%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+ N ++ G+ + S F+ M +G + +Y+ ++ + K+ + +A L KEM
Sbjct: 466 VCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 525
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
KG K +++ Y+ ++ + + +D A+ ++ + E G +P V N +I LC +G+V
Sbjct: 526 LHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKV 585
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
+A + +EM ++ CVP+++T++ K R+
Sbjct: 586 EDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRD 619
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 159/355 (44%), Gaps = 15/355 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+ +I+ EF ++ RMK + F ++FK AHL EA+ F++
Sbjct: 91 TFYRLIENYATSREFHFIHQVLDRMKRE-GRVLTETIFILIFKACGKAHLPGEAVNFFHR 149
Query: 93 L-DEFGLKDEV----SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
+ ++ K V S N++ ++ + + FG N GF YN+
Sbjct: 150 MANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSK-GFQP-----NLLTYNL 203
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
I++ K+ + + + EM + D+ +YS M+ +CK + +AV L EM+ +G
Sbjct: 204 IIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEG 263
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ V +N +I A+ + + A ++ M GC P+ VT NT+I LC G++ +A
Sbjct: 264 CLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAL 323
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKF 324
++L +M CVP+ +TY L K R + + M E G + Y L+
Sbjct: 324 SLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGL 383
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ G +WK+M E GC P+ Y A +D L D A +EM +KG
Sbjct: 384 FKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKG 438
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 176/409 (43%), Gaps = 41/409 (10%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNL-IHRMKDNPSSI-PNHATFR 71
A+ FF+ + D H T ++NSV++++ + +F ++ +H N PN T+
Sbjct: 143 AVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYN 202
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEA--------QE 122
++ K ++ A+ TF ++ +V +Y L++ LC+ + V EA E
Sbjct: 203 LIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAE 262
Query: 123 LCFGENKNVGFSGLVE-----------------------MNKTKIYNMILRGWFKMSWWG 159
C V F+ L++ + YN ++ G
Sbjct: 263 GCLP--NPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 320
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
K E+M V + +Y ++ + K + V + M+++G K + Y+++I
Sbjct: 321 KALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLI 380
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
+ + A+R+++EM E GC+P+VV I LC + + EA +L EM KG +
Sbjct: 381 SGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFL 440
Query: 280 PDVITYHC----FFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFV 335
P+ TY FF+ + + IL ++ M+ +R + +LL G LR
Sbjct: 441 PNAFTYSSLMKGFFKKGDSQKAIL-VWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALT 499
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
VW M G PD AY++++ L D G +D K EM + ++P
Sbjct: 500 VWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRP 548
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 151/342 (44%), Gaps = 25/342 (7%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N +ID L K + + L+ M +PN T+ + +++A+ K
Sbjct: 270 TFNVLIDALSKNGDLSRAAKLVDNMFLK-GCVPNEVTYNTLIHGLCLKGKLDKALSLLEK 328
Query: 93 L-DEFGLKDEVSYCNLVDALCEYK------HVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
+ + ++V+Y +++ L + + H++ + E G+ N IY
Sbjct: 329 MVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEE-RGQKAN-----------EYIY 376
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
+ ++ G FK W+EM ++G ++ Y ++D +C+ KP +A + +EM
Sbjct: 377 SSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLS 436
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
KG + Y+++++ A+ V++EM + +VV C+ ++ LCE+GR+RE
Sbjct: 437 KGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLRE 496
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRM--IESGIRPKMDTYVML 320
A V M +G PDV+ Y + L + L LF M E RP + TY +L
Sbjct: 497 ALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNIL 556
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
R L + M + GC PD N ++ L ++
Sbjct: 557 FNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRER 598
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 152/306 (49%), Gaps = 11/306 (3%)
Query: 85 EAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK 143
+A+ F K+ + + + + Y ++D LC+ V EA LC +N +E++
Sbjct: 193 DAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENG-----IELDVYS 247
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRG-VVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
YN ++ G+ + + + +EM RG V D+++++I +D +CK G+ +A +
Sbjct: 248 -YNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAV 306
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M K+G K D+V+YN ++ +S V A +V+ +M E P+V++ T+I C+
Sbjct: 307 MIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRM 366
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVM 319
V EA +L EM K VPD +TY+C L K L L + M SG + TY +
Sbjct: 367 VDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNV 426
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
LL + + +++ + E+G SP+ YN L+D L G L A++ + + AKG
Sbjct: 427 LLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKG 486
Query: 380 LSAKPR 385
R
Sbjct: 487 CQPNIR 492
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 129/265 (48%), Gaps = 16/265 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N +ID L K ++N++ M P+ ++ + Y + V EA F+K
Sbjct: 283 TFNILIDGLCKLGRVSEAYNVVAVMIKRGWK-PDIVSYNALMNGYCLSGSVGEAKQVFDK 341
Query: 93 LDE-FGLKDEVSYCNLVDALCEYKHVIEAQELCFG-ENKNVGFSGLVEMNKTKIYNMILR 150
+ E L + +SYC L++ C+ + V EA L NKN+ + T YN +L
Sbjct: 342 MVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNL-------VPDTVTYNCLLD 394
Query: 151 GWFKMSWWGKCREFW---EEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
G +S G+ W E M G DL +Y++ +D K K KA+ L++ + + G
Sbjct: 395 G---LSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIG 451
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
I ++ YN ++ + S + +A +++ + GCQP++ T N +I LC+ G + EA
Sbjct: 452 ISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAE 511
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCL 292
A+L +M +P+ IT+ R +
Sbjct: 512 ALLYKMVNNNYLPNYITFDTIVRAI 536
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 140/313 (44%), Gaps = 26/313 (8%)
Query: 19 NWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYV 78
N +E D + +YNS+I F + L+ M P+ TF I+
Sbjct: 239 NGIELDVY------SYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLC 292
Query: 79 TAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLV 137
V+EA + + G K D VSY L++ C V EA+++ F +V
Sbjct: 293 KLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQV---------FDKMV 343
Query: 138 EMNKTKIYNMI-----LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
E +T + N+I + G+ K+ + EM + +V D +Y+ +D + KSG+
Sbjct: 344 E--RTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGR 401
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
L + M+ G D++ YN ++ E D A+ +++ + E+G P++ T N
Sbjct: 402 SLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNI 461
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESG 309
++ LC++GR++ A + + KGC P++ TY+ L K E L +M+ +
Sbjct: 462 LLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNN 521
Query: 310 IRPKMDTYVMLLR 322
P T+ ++R
Sbjct: 522 YLPNYITFDTIVR 534
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 139/370 (37%), Gaps = 81/370 (21%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
+N ++ L K ++ +L ++ P+ P+ TF I+ + + A +
Sbjct: 72 FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131
Query: 94 DEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ G + +V L+ LC V+EA L
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSL----------------------------- 162
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
E RG D Y ++ +CK GK A++++ +MKK + ++
Sbjct: 163 ------------LHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNL 210
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ---------------------------- 244
+ YNTVI + VD A + EM E G +
Sbjct: 211 IMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDE 270
Query: 245 --------PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE- 293
P V T N +I LC+ GRV EAY V+A M K+G PD+++Y+ CL
Sbjct: 271 MVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSG 330
Query: 294 KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
E +FD+M+E P + +Y L+ + + + V+ +M PD YN
Sbjct: 331 SVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYN 390
Query: 354 ALVDALIDKG 363
L+D L G
Sbjct: 391 CLLDGLSKSG 400
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 105/240 (43%), Gaps = 5/240 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVK-DLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+N +L K+ + + + + +K L ++SI ++ + G+ A L +
Sbjct: 72 FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
K G ++DV T+++ + + V A+ + E + G + V T+I LC+ G+
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVML 320
R+A + +M K P++I Y+ L K E GL M+E+GI + +Y +
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251
Query: 321 LRKFGRWGFLRPVFVVWKKMEELG-CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ F G + + +M G PD + +N L+D L G + A M +G
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRG 311
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 33/186 (17%)
Query: 196 AVKLYKEMKKK-GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
V LY ++ K IK ++ ++ +I A + FA + + +MG Q V T++
Sbjct: 88 VVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLM 147
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKM 314
K LC GRV EA ++L E +G FR FD +
Sbjct: 148 KGLCLKGRVLEAVSLLHEYVDRG-----------FR-----------FDEV--------- 176
Query: 315 DTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
Y ++ + G R ++ KM+++ P+ YN ++D L +G++D A E
Sbjct: 177 -CYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTE 235
Query: 375 MFAKGL 380
M G+
Sbjct: 236 MVENGI 241
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 177/394 (44%), Gaps = 22/394 (5%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+ D +AL+FFNW + + +THT +Y S+++ILG+ + + N + ++ I
Sbjct: 88 FLRDTSKALQFFNWAQ-EMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVK 146
Query: 67 HAT--FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
F + + + A L E++ F + G+ V ++ +L+ L + A+++
Sbjct: 147 LEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKV 206
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
++ + G+ T +N+++RG+ + ++ + G D+ +Y+
Sbjct: 207 ---YDEMLSTYGVTP--DTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTL 261
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMD--VVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+D +C++GK A + K M KK + ++ VV Y T+IR ++ A+ V+ EM
Sbjct: 262 VDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQ 321
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV-PDVITYHCFFRC---LEKPRE 297
G + + +T NT+IK LCE + + +L G PD T++ C +
Sbjct: 322 GLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDD 381
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL-------GCSPDEF 350
L +F+RM E I+P TY L+R + G + K+ E GC P
Sbjct: 382 ALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVA 441
Query: 351 AYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
AYN + L + G A K ++ +G P
Sbjct: 442 AYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPP 475
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 160/354 (45%), Gaps = 29/354 (8%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+NS++ IL K +++ + M P+ TF I+ + + +V++ FN
Sbjct: 186 TFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFND 245
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI-YNMILR 150
L FG + D V+Y LVD LC V A + G K V++N + Y ++R
Sbjct: 246 LSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKS-----VDLNPNVVTYTTLIR 300
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG-IK 209
G+ K +EEM +G+ + +Y+ + +C++ K K + + G
Sbjct: 301 GYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFS 360
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
D +NT++ + +D A++V+ M E+ QP T + +++ LC+ G +A +
Sbjct: 361 PDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDL 420
Query: 270 LAEMPKK-------GCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIR--PKMDTY 317
L ++ ++ GC P V Y+ F+ L K ++ F +++ G + P T
Sbjct: 421 LDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTL 480
Query: 318 VMLLRKFGRW--GFLRPVFVVWKKMEELGCSPDEFAYNALVDALI--DKGMLDM 367
+M K G + G+ V ++ K PD Y +L++ L+ DK +L +
Sbjct: 481 IMGHCKEGTFESGYELLVLMLRKDF-----XPDFETYESLINGLLHMDKPLLAL 529
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 162/394 (41%), Gaps = 33/394 (8%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI-PNHATFRIMFKRYVTAHLVNEAMGTFN 91
TYN+++D L + + +++N++ M + PN T+ + + Y + +A+ F
Sbjct: 257 TYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFE 316
Query: 92 KLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
++ GLK + ++Y L+ LCE + + +++ G + FS T +N ++
Sbjct: 317 EMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSP-----DTCTFNTLMH 371
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK---- 206
+ +E M + + D +YS + +C+ G KA L ++ ++
Sbjct: 372 CHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILL 431
Query: 207 ---GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ--PSVVTCNTVIKLLCENG 261
G K V AYN + + + + A + +R++ G Q PS T+I C+ G
Sbjct: 432 SGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSY---KTLIMGHCKEG 488
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYV 318
Y +L M +K PD TY L +KP L ++M+ S RP T+
Sbjct: 489 TFESGYELLVLMLRKDFXPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFH 548
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+L K G + + M + + V L GM D A + ++ K
Sbjct: 549 SILAKLLEQGRASESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYGK 608
Query: 379 GLSAKPREEL-----------GTKLVQGGLDGEQ 401
G S K E + G+KL+ L+ Q
Sbjct: 609 GYSVKMEELIRYLCHCRKVIQGSKLLLFSLESHQ 642
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 99/240 (41%), Gaps = 34/240 (14%)
Query: 159 GKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG---IKMDVVAY 215
K +F+ + G SY ++I+ ++ A ++K+ +K++ +
Sbjct: 93 SKALQFFNWAQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFF 152
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
N+++R + +++V+ M+ G PSVVT N+++ +L + GR A V EM
Sbjct: 153 NSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEM-- 210
Query: 276 KGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFV 335
+ TY G+ P T+ +L+R F G + F
Sbjct: 211 ------LSTY-----------------------GVTPDTFTFNILIRGFCMNGMVDDGFR 241
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
++ + GC PD YN LVD L G + +A + M K + P T L++G
Sbjct: 242 IFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRG 301
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 70/167 (41%), Gaps = 30/167 (17%)
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
TV++ +G A++ + +EMG + + +++++L N + A L + K
Sbjct: 80 TTVLQTLGFLRDTSKALQFFNWAQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEK 139
Query: 276 KGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFV 335
+ R I+ L R S L+R F R G +
Sbjct: 140 RS------------------RGIVKLEARFFNS-----------LMRNFNRAGLFQESIK 170
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK-YDEEMFAKGLS 381
V+ M+ G SP +N+L+ L+ +G +MA+K YDE + G++
Sbjct: 171 VFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVT 217
>gi|255660966|gb|ACU25652.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 376
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 122/233 (52%), Gaps = 5/233 (2%)
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
SG VE + T Y +++ G+ K + K E +++G V D +YS ++ +CK
Sbjct: 88 SGFVEDSIT--YGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANL 145
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
+A+ + M K G K +V YNT+I + + + A+RV+REM M C P+++T NT+
Sbjct: 146 DRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCSPTIITYNTL 205
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGI 310
I LC+N EAY ++ E+ KG P VITY + CL+ K L L++++I G
Sbjct: 206 INGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVISKGF 265
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
+P + + +L+ G ++ ++ M C+P+ ++N L++ G
Sbjct: 266 KPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDG 318
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 107/227 (47%), Gaps = 3/227 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+N+++RG F + WE M + G V+D +Y I + CK+G K++ + + +
Sbjct: 62 FNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAE 121
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+KG +D AY+ +I + +D A+ V M + GC+P+V NT+I L +
Sbjct: 122 QKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFE 181
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLL 321
+A V EM C P +ITY+ L K E L +++ G+ P + TY ML+
Sbjct: 182 DAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLM 241
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
+ + +W ++ G PD +N L+ L G + +A
Sbjct: 242 KGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKMQLA 288
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 113/255 (44%), Gaps = 6/255 (2%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+YN +L G+F+++ C E WE M G + + S++I M + +GK + + +++ M
Sbjct: 27 VYNAMLNGYFRVAKIKDCFELWEMMGSEGN-RSVSSFNIMMRGLFDNGKVDEVISIWELM 85
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
K+ G D + Y ++ + +D ++ V + G + +I LC+ +
Sbjct: 86 KESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANL 145
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVML 320
A +VL M K GC P+V Y+ L K + + +F M P + TY L
Sbjct: 146 DRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCSPTIITYNTL 205
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + + + K++ + G P Y+ L+ L ++ A + ++ +KG
Sbjct: 206 INGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVISKGF 265
Query: 381 SAKPREELGTKLVQG 395
KP ++ L+ G
Sbjct: 266 --KPDVQMHNILIHG 278
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 80/148 (54%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G K +G+ +E+ +G+ + +YS+ M +C K +A++L+ ++
Sbjct: 202 YNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVI 261
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
KG K DV +N +I + + A+ +Y +M C P++V+ NT+++ ++G +R
Sbjct: 262 SKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIR 321
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL 292
A + A + + G PD+I+Y+ + L
Sbjct: 322 NALMIWARILRNGLEPDIISYNITLKGL 349
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 92/230 (40%), Gaps = 37/230 (16%)
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI----RAVGV-----------SEG----- 227
C+SG A ++YKE+ + + D V YN ++ R + SEG
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60
Query: 228 --------------VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
VD + ++ M+E G +T ++ C+NG + ++ VL
Sbjct: 61 SFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMA 120
Query: 274 PKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
+KG V D Y L K + L + + MI+SG +P + Y L+
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKF 180
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
V+++M + CSP YN L++ L M A +E+ KGL
Sbjct: 181 EDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGL 230
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 113/253 (44%), Gaps = 8/253 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
Y+++I+ L K D + ++++ M + PN + + A +A+ F +
Sbjct: 131 AYSAMINGLCKEANLDRALSVLNGMIKSGCK-PNVHVYNTLINGLAGASKFEDAIRVFRE 189
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + +Y L++ LC+ + EA L K + GL T Y+M+++G
Sbjct: 190 MGTMHCSPTIITYNTLINGLCKNEMFGEAYNLV----KELLDKGLDPGVIT--YSMLMKG 243
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + W ++ +G D+ ++I + +C GK A+ LY +M + +
Sbjct: 244 LCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPN 303
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+V++NT++ + A+ ++ + G +P +++ N +K LC R+ +A L
Sbjct: 304 LVSHNTLMEGFYKDGDIRNALMIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLH 363
Query: 272 EMPKKGCVPDVIT 284
+ K VP IT
Sbjct: 364 DAVTKKIVPTKIT 376
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 9/202 (4%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A+ ++ A+ F + T H + T TYN++I+ L K F ++NL+ + D P
Sbjct: 177 ASKFEDAIRVFREMGT-MHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLD-PGV 234
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFG 126
T+ ++ K H V A+ +N++ G K +V N L+ LC + A L F
Sbjct: 235 ITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKMQLALSLYFD 294
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
N+ LV +N ++ G++K W + + G+ D+ SY+I +
Sbjct: 295 MNRWKCAPNLVS------HNTLMEGFYKDGDIRNALMIWARILRNGLEPDIISYNITLKG 348
Query: 187 MCKSGKPWKAVKLYKEMKKKGI 208
+C + A+ + K I
Sbjct: 349 LCSCNRISDAILFLHDAVTKKI 370
>gi|414887035|tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
Length = 668
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 148/355 (41%), Gaps = 44/355 (12%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQEL 123
P+ F + + A L + A+ GL + L+ AL V EA+ L
Sbjct: 226 PDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEAL 285
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+G ++ +T+ YN +L+G+ +++ + +EM + GV D +YS+
Sbjct: 286 FL----EFFLAGEIK-PRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLL 340
Query: 184 MDIMCKSG-----------------KP-----------------W-KAVKLYKEMKKKGI 208
+D ++G KP W KA + +EM+ G+
Sbjct: 341 VDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGV 400
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ D YN +I G + AM + +MRE G +P VVT NT+I C+ GR A
Sbjct: 401 RPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAE 460
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPRE---ILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ EM + C P TY+ L + + + M E G+ P + TY L+ +G
Sbjct: 461 LFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYG 520
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
R G + + M+ G P Y+ALV+A +G+ D A + M A GL
Sbjct: 521 RSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGL 575
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 127/263 (48%), Gaps = 16/263 (6%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ + +M + + + AM FNK+ E G++ D V++ L+DA C+ A EL
Sbjct: 402 PDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAEL 461
Query: 124 CFGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
F + E N T YN+++ + W EM ++G+V ++ +Y
Sbjct: 462 ---------FEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITY 512
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ +D+ +SG+ +A+ + MK G+K Y+ ++ A D A+ V + M+
Sbjct: 513 TTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKA 572
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPRE 297
G + S++ N++I E+ RV EA++VL M + G PDVITY + L E+ +
Sbjct: 573 DGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDK 632
Query: 298 ILGLFDRMIESGIRPKMDTYVML 320
+ +++ MI SG P ML
Sbjct: 633 VPVIYEEMITSGCAPDRKARAML 655
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 10/298 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
P + + K YV + A +++ + G+ DE +Y LVDA E+ +
Sbjct: 297 PRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGR-WESARI 355
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
E + G + +++ IL G+ W K EM GV D H Y++
Sbjct: 356 LLKEMEADGVK-----PSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVM 410
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D K A+ + +M+++GI+ DVV +NT+I A D A ++ EMRE C
Sbjct: 411 IDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNC 470
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILG 300
P T N +I LL E A+L+EM ++G VP++ITY + +E +
Sbjct: 471 PPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAID 530
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+ M G++P Y L+ + + G V K M+ G N+L++A
Sbjct: 531 CIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINA 588
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 92/217 (42%), Gaps = 13/217 (5%)
Query: 174 VKDLHSYSIYMDIMCKSGKPWKAV---KLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF 230
+ DL SYS + + + P A +L ++++ ++ D ++ +I A + D
Sbjct: 187 LPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLISAFARAALPDA 246
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV-PDVITYHCFF 289
A+ + + +G P +I L GRV EA A+ E G + P Y+
Sbjct: 247 ALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALL 306
Query: 290 R------CLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
+ L+ ++L D M + G+ P TY +L+ + R G ++ K+ME
Sbjct: 307 KGYVRIASLKNAEQVL---DEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEAD 363
Query: 344 GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G P + ++ ++ D+G A EM A G+
Sbjct: 364 GVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGV 400
>gi|125555457|gb|EAZ01063.1| hypothetical protein OsI_23091 [Oryza sativa Indica Group]
Length = 552
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 157/337 (46%), Gaps = 11/337 (3%)
Query: 47 FDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN 106
D++ ++H + P+ T+ + A V++A+ +++ G+ ++
Sbjct: 99 LDVALRILHEIIPGWDLAPDKFTYSTVVSALADAGRVDDAVALVHEMVADGVVAAEAFNP 158
Query: 107 LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE 166
++ A+ V A +L + + G V T YN+++ G G
Sbjct: 159 VLRAMLRAGDVKGAAKL----FEFMQLKGCVPTAAT--YNVLVHGLLVCGRAGAAMGVMR 212
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
M++ GVV + +Y +D + + G+ A K+ +EM++ G+ + Y+TVI S
Sbjct: 213 RMEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLARNEFVYSTVITGFCKSG 272
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY- 285
+D A++V+ M +P+VV + +I L G++ EA + EM C P++ITY
Sbjct: 273 EIDCALKVWEAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIDSKCAPNIITYG 332
Query: 286 ---HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE 342
+F+ + R L +++ MI +G P +Y +L+ G L+ +VWK M +
Sbjct: 333 SMIQGYFKIGDTSRA-LSVWEEMIGAGCMPNAVSYSILINGLCNVGRLKDAMMVWKHMLD 391
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
GC+PD AY +++ L GM+D + +M A G
Sbjct: 392 RGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASG 428
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 121/303 (39%), Gaps = 48/303 (15%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQE 122
+P AT+ ++ + AMG +++ G+ V +Y +VD L V +A +
Sbjct: 185 VPTAATYNVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVDGLVRCGRVKDAWK 244
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ +N GL +Y+ ++ G+ K + WE M V ++ YS
Sbjct: 245 VAEEMERN----GLAR--NEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPNVVLYSA 298
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ + GK +A L++EM +++ Y ++I+ A+ V+ EM G
Sbjct: 299 MIGGLANFGKMTEAELLFREMIDSKCAPNIITYGSMIQGYFKIGDTSRALSVWEEMIGAG 358
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---------- 292
C P+ V+ + +I LC GR+++A V M +GC PD I Y + L
Sbjct: 359 CMPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGL 418
Query: 293 ------------------------------EKPREILGLFDRMIESGIRPKMDTYVMLLR 322
+ PR + L +RM++ G P T + LR
Sbjct: 419 RLFYDMLASGHADPDVISYNVLLDGLLLAKDLPRA-MDLLNRMLDQGCDPDTVTCNIFLR 477
Query: 323 KFG 325
+FG
Sbjct: 478 EFG 480
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 129/327 (39%), Gaps = 62/327 (18%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +V+D L + +W + M+ N + N + + + + ++ A+ +
Sbjct: 225 TYGAVVDGLVRCGRVKDAWKVAEEMERNGLA-RNEFVYSTVITGFCKSGEIDCALKVWEA 283
Query: 93 LDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ ++ V Y ++ L + + EA EL F E + + Y +++G
Sbjct: 284 MVASPVRPNVVLYSAMIGGLANFGKMTEA-ELLFREMIDSKCA-----PNIITYGSMIQG 337
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+FK+ + WEEM G + + SYSI ++ +C G+ A+ ++K M +G D
Sbjct: 338 YFKIGDTSRALSVWEEMIGAGCMPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRGCAPD 397
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREM---------------------------REM--- 241
+AY ++I+ + VS VD +R++ +M R M
Sbjct: 398 TIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHADPDVISYNVLLDGLLLAKDLPRAMDLL 457
Query: 242 ------GCQPSVVTCNTVIK------------------LLCENGRVREAYAVLAEMPKKG 277
GC P VTCN ++ LC+ R A VL M K
Sbjct: 458 NRMLDQGCDPDTVTCNIFLREFGAGERKGREFLEGLVVRLCDRRRNMAAGEVLMVMLAKY 517
Query: 278 CVPDVITYHCFFRCLEKPREILGLFDR 304
VP+ + R + + + + + D+
Sbjct: 518 IVPEAPIWEMVVRDVCRRKRVWRVIDK 544
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 5/158 (3%)
Query: 228 VDFAMRVYREMREM-GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
+D A+R+ E+ P T +TV+ L + GRV +A A++ EM G V ++
Sbjct: 99 LDVALRILHEIIPGWDLAPDKFTYSTVVSALADAGRVDDAVALVHEMVADGVVA-AEAFN 157
Query: 287 CFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
R + + ++ G LF+ M G P TY +L+ G V ++ME
Sbjct: 158 PVLRAMLRAGDVKGAAKLFEFMQLKGCVPTAATYNVLVHGLLVCGRAGAAMGVMRRMERE 217
Query: 344 GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G P Y A+VD L+ G + A K EEM GL+
Sbjct: 218 GVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLA 255
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 139/304 (45%), Gaps = 8/304 (2%)
Query: 83 VNEAMGTF-NKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN 140
V EAM ++ E G + D VSY L+ LC K EA EL + +S +
Sbjct: 145 VGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVV 204
Query: 141 KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
Y+ ++ G+F K + EM RG+ D+ +Y+ +D +CK+ +A ++
Sbjct: 205 S---YSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVF 261
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
++M G+K ++ YN +I +R+ EM G +P+ T +++ LC+N
Sbjct: 262 QQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKN 321
Query: 261 GRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTY 317
GR REA M KG P V TY E+ L + M+ +GI P +
Sbjct: 322 GRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIF 381
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
+ + + G + ++ KM + G SPD +Y AL+DAL G +D A +M
Sbjct: 382 NIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMIN 441
Query: 378 KGLS 381
+G++
Sbjct: 442 EGVT 445
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 157/351 (44%), Gaps = 40/351 (11%)
Query: 52 NLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDA 110
+L++ M N S PNH F I F Y ++++AM FNK+ + GL D VSY L+DA
Sbjct: 364 DLLNLMVANGIS-PNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDA 422
Query: 111 LCEYKHVIEAQELCFGENKNVG-------FSGLV-----------------EMNKTKIYN 146
LC+ V +A E+ F + N G FS LV EM I+
Sbjct: 423 LCKLGRVDDA-EVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHP 481
Query: 147 MILRGWFKMSWWGKCRE--------FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK 198
I+ +F C+E + ++ GV D+ SY+ +D C +G +A K
Sbjct: 482 NIV--FFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASK 539
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
L + M G+K D +YNT++ + +D A +R+M G P VVT NT++ L
Sbjct: 540 LLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLF 599
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMD 315
+ R EA + M G D+ TY+ L K E + +F + G++ +
Sbjct: 600 QTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNII 659
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
T+ +++ + G ++ + G + Y +V+ LI++G L+
Sbjct: 660 TFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLE 710
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 141/324 (43%), Gaps = 12/324 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PN T+ I+ + + F + + G + D + L++ LC+ K V EA ++
Sbjct: 92 PNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDV 151
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGV---VKDLHSY 180
+G M T YN++L+G + E M V ++ SY
Sbjct: 152 LLQRMPELGC-----MPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSY 206
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
S ++ G+ K L+ EM +GI DVV Y TVI + ++ D A V+++M +
Sbjct: 207 STVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMID 266
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---RE 297
G +P++ T N +I G+ +E +L EM G P+ TY L K RE
Sbjct: 267 NGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCRE 326
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
FD MI GI+P + TY ++L + G L + + M G SP+ +N
Sbjct: 327 ARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFS 386
Query: 358 ALIDKGMLDMARKYDEEMFAKGLS 381
A G++D A +M +GLS
Sbjct: 387 AYAKCGIIDKAMDIFNKMRQQGLS 410
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 166/383 (43%), Gaps = 40/383 (10%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +VID L K FD + + +M DN PN T+ + Y++ E + +
Sbjct: 240 TYTTVIDGLCKAQLFDRAEAVFQQMIDNGVK-PNIDTYNCLIHGYLSIGKWKEVVRMLEE 298
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQ-----ELCFGENKNVGFSG----------- 135
+ G K +Y +L++ LC+ EA+ + G +V G
Sbjct: 299 MSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGA 358
Query: 136 LVEMN-------------KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L EM+ I+N+ + K K + + +M ++G+ D SY
Sbjct: 359 LSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGA 418
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D +CK G+ A + +M +G+ D+V +++++ + + + ++ EM +G
Sbjct: 419 LIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVG 478
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPR 296
P++V NT++ LC+ GRV E ++ + G PDVI+Y HC +++
Sbjct: 479 IHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEAS 538
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
++L + M+ G++P +Y LL + + G + + ++KM G +P YN ++
Sbjct: 539 KLL---EGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTIL 595
Query: 357 DALIDKGMLDMARKYDEEMFAKG 379
L A++ M G
Sbjct: 596 HGLFQTKRFSEAKELYLNMINSG 618
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 164/392 (41%), Gaps = 64/392 (16%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDIL---GKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
A++ F + + TY V++ L G EFD +L M+ N ++ PN
Sbjct: 677 AMDLFAAIPAN-GLVQNVVTYRLVVENLIEEGSLEEFD---SLFSAMEKNGTA-PNSQML 731
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALC---EYKHVIEAQELCFGE 127
+ +R + ++ A +KLDE E S +++ ++ EY+H A+ L
Sbjct: 732 NALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQH--HAKSL---- 785
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
+ L E N + + K + EM +G+ D+ +Y+ + +
Sbjct: 786 --PKKYRILNEANSSALIK-------KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGL 836
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
++G+ +A +LY M +M++ YN ++ + S VD A ++++ + G Q ++
Sbjct: 837 FQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNI 896
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIE 307
+T N +I L + GR +A + A +P G VPDV+TY + + +IE
Sbjct: 897 ITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRL-------------VAENLIE 943
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
G + D ++ ME+ G D NALV L+ +G +
Sbjct: 944 EGSLEEFDG-------------------LFLTMEKSGTPLDSRLLNALVRRLLQRGDISR 984
Query: 368 ARKY----DEEMFAKGLSAKPREELGTKLVQG 395
A Y DE+ F+ L A EL + +G
Sbjct: 985 AGAYLSKLDEKNFS--LEASTTSELISLFSRG 1014
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 142/338 (42%), Gaps = 38/338 (11%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ ++ + + A ++EA + GLK D SY L+ C+ + A
Sbjct: 516 PDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSA--- 572
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ + + +G+ T YN IL G F+ + + +E + M G D+++Y+I
Sbjct: 573 -YSHFRKMLSNGITPGVVT--YNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNII 629
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
++ +CKS +A+K+++ + KG++++++ +N +I A+ + AM ++ + G
Sbjct: 630 LNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGL 689
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL---G 300
+VVT V++ L E G + E ++ + M K G P+ + R L +I
Sbjct: 690 VQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGA 749
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGF----------------------------LRP 332
++ E + T ML+ F + +
Sbjct: 750 YLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDD 809
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
+ ++++M G +PD YN ++ L G A++
Sbjct: 810 AYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKE 847
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 123/254 (48%), Gaps = 5/254 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN+++ G W + +M +RG + +++I ++ +C+ G +A+ + ++M
Sbjct: 157 YNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMP 216
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K G + ++YN ++ + ++ A+ +M GC P +VT NT++ LC++G+V
Sbjct: 217 KHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVD 276
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLE---KPREILGLFDRMIESGIRPKMDTYVMLL 321
A +L ++ KGC P +ITY+ L K + L D M G++P + TY L+
Sbjct: 277 AAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLV 336
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
R G + + +E LG P+ YNA++ L D A + M +G
Sbjct: 337 GGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRG-- 394
Query: 382 AKPREELGTKLVQG 395
KP E T L++G
Sbjct: 395 CKPTEASYTILIEG 408
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 118/243 (48%), Gaps = 12/243 (4%)
Query: 164 FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
F E M RG + D+ + + CK GK KA ++ + ++ G DV+ YN +I +
Sbjct: 106 FLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMC 165
Query: 224 VSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVI 283
+ A ++ +M GC PSVVT N +I LC G + A VL +MPK GC P+ +
Sbjct: 166 STGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSL 225
Query: 284 TYH------CFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVW 337
+Y+ C + +E+ E LG +M G P + TY LL + G + +
Sbjct: 226 SYNPLLHGFCKEKKMERAIEYLG---KMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELL 282
Query: 338 KKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGL 397
++ GCSP YN ++D L G D A K +EM AKGL KP + LV GGL
Sbjct: 283 NQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGL--KPDIITYSSLV-GGL 339
Query: 398 DGE 400
E
Sbjct: 340 SRE 342
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 134/297 (45%), Gaps = 9/297 (3%)
Query: 94 DEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWF 153
D + D ++Y L+ +C ++A++L + G S V +N+++
Sbjct: 147 DSGAVPDVITYNVLISGMCSTGRWMDAEKL-LADMVRRGCSPSVVT-----FNILINFLC 200
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
+ G+ + E+M K G + SY+ + CK K +A++ +M +G D+V
Sbjct: 201 RKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIV 260
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
YNT++ A+ VD A+ + ++ GC P ++T NTVI L + G+ +A +L EM
Sbjct: 261 TYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEM 320
Query: 274 PKKGCVPDVITYHCFFRCLE---KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
KG PD+ITY L K E + F + G++P TY ++ +
Sbjct: 321 RAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKT 380
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREE 387
M + GC P E +Y L++ L +G+ A + E+ +G+ K E
Sbjct: 381 DRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGVVKKSSAE 437
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 5/199 (2%)
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+ ++G+ + + + M +G D++ ++IR A R+ + + G P
Sbjct: 94 LVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPD 153
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG----LF 302
V+T N +I +C GR +A +LA+M ++GC P V+T++ L + + +LG +
Sbjct: 154 VITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCR-KGLLGRAIDVL 212
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
++M + G P +Y LL F + + KM GC PD YN L+ AL
Sbjct: 213 EKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKD 272
Query: 363 GMLDMARKYDEEMFAKGLS 381
G +D A + ++ +KG S
Sbjct: 273 GKVDAAVELLNQLSSKGCS 291
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 127/276 (46%), Gaps = 11/276 (3%)
Query: 6 CYANDWKRALEFF-NWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C W A + + V C + + T+N +I+ L + + +++ +M + +
Sbjct: 165 CSTGRWMDAEKLLADMVRRGC--SPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCT- 221
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
PN ++ + + + A+ K+ G D V+Y L+ ALC+ V A EL
Sbjct: 222 PNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVEL 281
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ + G S ++ YN ++ G K+ + + +EM +G+ D+ +YS
Sbjct: 282 -LNQLSSKGCSPVL-----ITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSL 335
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ + + GK +A+K + +++ G+K + + YN ++ + + D A+ M + GC
Sbjct: 336 VGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGC 395
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
+P+ + +I+ L G +EA +L E+ +G V
Sbjct: 396 KPTEASYTILIEGLAYEGLAKEALELLNELCLRGVV 431
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 9/138 (6%)
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--C-LEKPREILGLFDR 304
+ N + L NG + E + L M +G +PD+I R C + K R+ + +
Sbjct: 85 IESNNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEI 144
Query: 305 MIESGIRPKMDTYVMLLRKF---GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
+ +SG P + TY +L+ GRW + M GCSP +N L++ L
Sbjct: 145 IEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLA---DMVRRGCSPSVVTFNILINFLCR 201
Query: 362 KGMLDMARKYDEEMFAKG 379
KG+L A E+M G
Sbjct: 202 KGLLGRAIDVLEKMPKHG 219
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 9/216 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C +RA+E+ + + + TYN+++ L K + D + L++++ S P
Sbjct: 235 CKEKKMERAIEYLGKMTSRGCYPDIV-TYNTLLTALCKDGKVDAAVELLNQLSSKGCS-P 292
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
T+ + ++A +++ GLK D ++Y +LV L V EA +
Sbjct: 293 VLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKF- 351
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F + + +G V+ N YN I+ G K + +F M +RG SY+I +
Sbjct: 352 FHDLEVLG----VKPNAI-TYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILI 406
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIR 220
+ + G +A++L E+ +G+ A +R
Sbjct: 407 EGLAYEGLAKEALELLNELCLRGVVKKSSAEKVAVR 442
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 159/355 (44%), Gaps = 15/355 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+ +I+ EF ++ RMK + F ++FK AHL EA+ F++
Sbjct: 67 TFYRLIENYATSREFHFIHQVLDRMKRE-GRVLTETIFILIFKACGKAHLPGEAVNFFHR 125
Query: 93 L-DEFGLKDEV----SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
+ ++ K V S N++ ++ + + FG N GF YN+
Sbjct: 126 MANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSK-GFQP-----NLLTYNL 179
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
I++ K+ + + + EM + D+ +YS M+ +CK + +AV L EM+ +G
Sbjct: 180 IIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEG 239
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ V +N +I A+ + + A ++ M GC P+ VT NT+I LC G++ +A
Sbjct: 240 CLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAL 299
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKF 324
++L +M CVP+ +TY L K R + + M E G + Y L+
Sbjct: 300 SLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGL 359
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ G +WK+M E GC P+ Y A +D L D A +EM +KG
Sbjct: 360 FKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKG 414
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 175/407 (42%), Gaps = 37/407 (9%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNL-IHRMKDNPSSI-PNHATFR 71
A+ FF+ + D H T ++NSV++++ + +F ++ +H N PN T+
Sbjct: 119 AVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYN 178
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEA--------QE 122
++ K ++ A+ TF ++ +V +Y L++ LC+ + V EA E
Sbjct: 179 LIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAE 238
Query: 123 LCFGE-----------NKNVGFSGLVEM----------NKTKIYNMILRGWFKMSWWGKC 161
C +KN S ++ YN ++ G K
Sbjct: 239 GCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 298
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
E+M V + +Y ++ + K + V + M+++G K + Y+++I
Sbjct: 299 LSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISG 358
Query: 222 VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
+ + A+R+++EM E GC+P+VV I LC + + EA +L EM KG +P+
Sbjct: 359 LFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPN 418
Query: 282 VITYHC----FFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVW 337
TY FF+ + + IL ++ M+ +R + +LL G LR VW
Sbjct: 419 AFTYSSLMKGFFKKGDSQKAIL-VWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVW 477
Query: 338 KKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
M G PD AY++++ L D G +D K EM + ++P
Sbjct: 478 THMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRP 524
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 151/342 (44%), Gaps = 25/342 (7%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N +ID L K + + L+ M +PN T+ + +++A+ K
Sbjct: 246 TFNVLIDALSKNGDLSRAAKLVDNMFLK-GCVPNEVTYNTLIHGLCLKGKLDKALSLLEK 304
Query: 93 L-DEFGLKDEVSYCNLVDALCEYK------HVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
+ + ++V+Y +++ L + + H++ + E G+ N IY
Sbjct: 305 MVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEE-RGQKAN-----------EYIY 352
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
+ ++ G FK W+EM ++G ++ Y ++D +C+ KP +A + +EM
Sbjct: 353 SSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLS 412
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
KG + Y+++++ A+ V++EM + +VV C+ ++ LCE+GR+RE
Sbjct: 413 KGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLRE 472
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRM--IESGIRPKMDTYVML 320
A V M +G PDV+ Y + L + L LF M E RP + TY +L
Sbjct: 473 ALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNIL 532
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
R L + M + GC PD N ++ L ++
Sbjct: 533 FNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRER 574
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 175/421 (41%), Gaps = 61/421 (14%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A RALE + T YN+VI + +++ M++ P
Sbjct: 125 CSAGKPARALELLRQMPRPNAVT-----YNTVIAGFCSRGRVQAALDIMREMRERGGIAP 179
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV------------SYCN------- 106
N T+ + + V+EA+ F DE K EV YC+
Sbjct: 180 NQYTYGTVISGWCKVGRVDEAVKVF---DEMLTKGEVKPEAVMYNALIGGYCDQGKLDTA 236
Query: 107 ---------------------LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
LV AL EA EL + +G GL Y
Sbjct: 237 LLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV----EEMGGKGLAP--DVFTY 290
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N+++ G K K E +E M +RGV + +Y+ + + K G+ + KL+ E +
Sbjct: 291 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 350
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+GI+ D+V YN +I + S +D A + EM + P VT NT+++ LC GRV E
Sbjct: 351 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 410
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLR 322
A ++ EM ++G PD++TY+ ++ L + + M+ G P + TY L++
Sbjct: 411 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 470
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ G + K+M E G +PD+ Y +L++ L + R D+E A +A
Sbjct: 471 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTED----ERAIDDERLAAADAA 526
Query: 383 K 383
K
Sbjct: 527 K 527
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 9/209 (4%)
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+++I + +C +GKP +A++L ++M + + V YNTVI V A+ + REM
Sbjct: 116 TFNIMLRHLCSAGKPARALELLRQMPRP----NAVTYNTVIAGFCSRGRVQAALDIMREM 171
Query: 239 REM-GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV-PDVITYHCFFR--CLEK 294
RE G P+ T TVI C+ GRV EA V EM KG V P+ + Y+ C +
Sbjct: 172 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 231
Query: 295 PREILGLF-DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
+ L+ DRM+E G+ + TY +L+ G + + ++M G +PD F YN
Sbjct: 232 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 291
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGLSA 382
L++ +G + A + E M +G+ A
Sbjct: 292 ILINGHCKEGNVKKALEIFENMSRRGVRA 320
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 9/191 (4%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A L+ +M + + + +N ++R + + A+ + R+M +P+ VT NTVI
Sbjct: 98 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIA 153
Query: 256 LLCENGRVREAYAVLAEMPKKGCV-PDVITYHCFFRC---LEKPREILGLFDRMIESG-I 310
C GRV+ A ++ EM ++G + P+ TY + + E + +FD M+ G +
Sbjct: 154 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 213
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
+P+ Y L+ + G L + +M E G + YN LV AL G A +
Sbjct: 214 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 273
Query: 371 YDEEMFAKGLS 381
EEM KGL+
Sbjct: 274 LVEEMGGKGLA 284
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 172/360 (47%), Gaps = 16/360 (4%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
FT TY +++ L + + D + L++++ P+ PN F I+ YV + ++EA
Sbjct: 309 FTPNDITYGVLMNGLCRVGKVDEAQVLLNKV---PT--PNDVHFTILINGYVKSGRLDEA 363
Query: 87 MG-TFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI 144
++K+ + G + +V ++ L+ LC+ + A ++ + N L+
Sbjct: 364 NAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLIT------ 417
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y +L G+ K + + EM +G ++ Y++ + +CK+GK KA+ + EM
Sbjct: 418 YTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMS 477
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
KG K D+ +NT+I + + + A+ +YR+M G + VT NT+I G ++
Sbjct: 478 DKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQ 537
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRC---LEKPREILGLFDRMIESGIRPKMDTYVMLL 321
EA ++ +M +GC D ITY+ + L + LGLFD M+ + P + +L+
Sbjct: 538 EALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLI 597
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
R G + + + M G +PD YN+L++ L G + A ++ A+G+
Sbjct: 598 NGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQ 657
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 160/405 (39%), Gaps = 75/405 (18%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D ++ F W + + HT D Y+ +ID LG EF + L+ ++K+ + +
Sbjct: 81 DVSTSMAIFQWAGSQKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAF-RESL 139
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENK 129
F + K Y A+L +A T LD G+ YC CE
Sbjct: 140 FICIMKYYGRANLPGQA--TRMLLDMKGV-----YC------CEPTF------------- 173
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
K YN++L + + EM +GV+ ++++ + M +C
Sbjct: 174 -------------KSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCM 220
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
+ A L ++M K G + V Y T+I A+ + V+ A+++ EM MGC P V T
Sbjct: 221 VNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDT 280
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL----------------E 293
N VI LC R+ E ++ M +G P+ ITY L
Sbjct: 281 FNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVP 340
Query: 294 KPREI-------------------LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
P ++ L+D+MI++G RP + T+ L+ + G +
Sbjct: 341 TPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAV 400
Query: 335 VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ M GC+P+ Y L+D K L+ A EM AKG
Sbjct: 401 DMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKG 445
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 151/332 (45%), Gaps = 11/332 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N++I L K + ++++ M N + PN T+ + + + + EA N+
Sbjct: 382 TFNTLIHGLCKKGLMGSAVDMVNDMSANGCT-PNLITYTTLLDGFCKKNQLEEAGYVLNE 440
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G + + Y L+ ALC+ V +A ++ GE + G +N ++ G
Sbjct: 441 MSAKGFELNIMGYNVLLRALCKNGKVPKALDM-LGEMSDKGCKP-----DIFTFNTLIFG 494
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K+ + +M GV+ + +Y+ + + G +A+KL +M +G +D
Sbjct: 495 LCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLD 554
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ YN +I+A + A+ ++ EM PS ++CN +I LC G+V A +L
Sbjct: 555 EITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLR 614
Query: 272 EMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+M +G PDV+TY+ L K RE LF+++ GI+P TY L+ R G
Sbjct: 615 DMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAG 674
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+++ + E P++ + LV I
Sbjct: 675 MFDDAYLLLLRGVENAFIPNDVTWYILVSNFI 706
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 150/334 (44%), Gaps = 14/334 (4%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T +YN V+DIL ++ N+ + M + IP TF ++ K + V+ A
Sbjct: 172 TFKSYNVVLDILVSANCPSVAANVFYEML-SKGVIPTVYTFGVVMKALCMVNEVDNACSL 230
Query: 90 FNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
+ + G + + V Y L+ AL + V EA +L + + G + +N +
Sbjct: 231 LRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLL----EEMFLMGCLP--DVDTFNDV 284
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G +++ + + + M RG + +Y + M+ +C+ GK +A L ++
Sbjct: 285 IYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPND 344
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ N +++ + E F +Y +M + GC+P V T NT+I LC+ G + A
Sbjct: 345 VHFTILINGYVKSGRLDEANAF---LYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVD 401
Query: 269 VLAEMPKKGCVPDVITYHCFFR--CLEKPREILG-LFDRMIESGIRPKMDTYVMLLRKFG 325
++ +M GC P++ITY C + E G + + M G + Y +LLR
Sbjct: 402 MVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALC 461
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ G + + +M + GC PD F +N L+ L
Sbjct: 462 KNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGL 495
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 184/427 (43%), Gaps = 83/427 (19%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T T+N++I+ L + + L+ RM +N PN T+ + + + A+
Sbjct: 135 TTTFNTLINGLCLESKVSEAVVLVARMVENGCQ-PNVVTYNSIVNGICKSGDTSLALDLL 193
Query: 91 NKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGF-SGLVEMNKTKIYNMI 148
K+DE +K +V +Y ++D+LC I+A F E + G S LV YN +
Sbjct: 194 RKMDERNVKADVFTYSTIIDSLCR-DGCIDAAISLFKEMETKGIKSSLVT------YNSL 246
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G K W + ++M R ++ ++ ++++ +D+ K GK +A +LYKEM KGI
Sbjct: 247 VGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGI 306
Query: 209 KMDVVAYNTV-----------------------------------IRAVGVSEGVDFAMR 233
+ + YN++ I+ + VD M+
Sbjct: 307 SPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMK 366
Query: 234 VYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------C 287
++R++ + G + VT + +++ C++G++ A + EM G +PDV+TY C
Sbjct: 367 LFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLC 426
Query: 288 FFRCLEKPREIL--------------------------------GLFDRMIESGIRPKMD 315
LEK EI LF + G++P +
Sbjct: 427 DNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 486
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
TY +++ + G L ++ +KMEE G P++ YN L+ A + G L + K EEM
Sbjct: 487 TYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEM 546
Query: 376 FAKGLSA 382
+ G SA
Sbjct: 547 KSCGFSA 553
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 160/339 (47%), Gaps = 11/339 (3%)
Query: 46 EFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSY 104
+F+L + +M+ N + N T IM + A K+ + G + D ++
Sbjct: 80 QFNLVLDFCKKMELNGIA-HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTF 138
Query: 105 CNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREF 164
L++ LC V EA L +N +V YN I+ G K +
Sbjct: 139 NTLINGLCLESKVSEAVVLVARMVENGCQPNVVT------YNSIVNGICKSGDTSLALDL 192
Query: 165 WEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGV 224
+MD+R V D+ +YS +D +C+ G A+ L+KEM+ KGIK +V YN+++ +
Sbjct: 193 LRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCK 252
Query: 225 SEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
+ + +++ ++M P+V+T N +I + + G+++EA + EM KG P+ IT
Sbjct: 253 AGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTIT 312
Query: 285 YHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKME 341
Y+ C++ + E + D M+ + P + T+ L++ + + + +++K+
Sbjct: 313 YNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKIS 372
Query: 342 ELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ G + Y+ LV G L++A + +EM + G+
Sbjct: 373 KRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGV 411
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 166/350 (47%), Gaps = 12/350 (3%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A+ F +ET + TYNS++ L K +++ L+ M IPN TF ++
Sbjct: 224 AISLFKEMETK-GIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSR-KIIPNVITFNVL 281
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
+V + EA + ++ G+ + ++Y +L+D C + EA + +N
Sbjct: 282 IDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNC 341
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
+V + +++G+ K+ + + + ++ KRG+V + +YSI + C+SGK
Sbjct: 342 SPDIVT------FTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGK 395
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
A +L++EM G+ DV+ Y ++ + + ++ A+ ++ ++++ +V
Sbjct: 396 LEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTI 455
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESG 309
+I+ +C+ G+V +A+ + +P KG P+V+TY L K E L +M E G
Sbjct: 456 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 515
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
P TY L+R R G L + ++M+ G S D + ++D L
Sbjct: 516 NEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 565
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 130/292 (44%), Gaps = 19/292 (6%)
Query: 108 VDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR---------------GW 152
D LC + + + +C+GE G + E + ++ ++R G
Sbjct: 17 TDFLCTISGISDGR-VCYGERLRSGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGV 75
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
+ +F ++M+ G+ ++++ +I ++ C+ K A + ++ K G + D
Sbjct: 76 ASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDT 135
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
+NT+I + + V A+ + M E GCQP+VVT N+++ +C++G A +L +
Sbjct: 136 TTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRK 195
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M ++ DV TY L + I + LF M GI+ + TY L+ + G
Sbjct: 196 MDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGK 255
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ K M P+ +N L+D + +G L A + +EM KG+S
Sbjct: 256 WNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGIS 307
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 136/286 (47%), Gaps = 9/286 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A W ++ + T T+N +ID+ K + + L M S P
Sbjct: 251 CKAGKWNDGVQLLKDM-TSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGIS-P 308
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N T+ + Y + ++EA + + D V++ +L+ C+ K V E +L
Sbjct: 309 NTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLF 368
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+ + GLV T Y+++++G+ + E ++EM GV+ D+ +Y I +
Sbjct: 369 ----RKISKRGLVA--NTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILL 422
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D +C +GK KA++++++++K + +D+V Y +I + V+ A ++ + G +
Sbjct: 423 DGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVK 482
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR 290
P+V+T +I LC+ G + EA +L +M + G P+ TY+ R
Sbjct: 483 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIR 528
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 91/190 (47%), Gaps = 3/190 (1%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A+ L++EM + +V ++ V ++ + + ++M G ++ T N +I
Sbjct: 49 AIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMIN 108
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRP 312
C + AY+VL ++ K G PD T++ CLE K E + L RM+E+G +P
Sbjct: 109 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQP 168
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
+ TY ++ + G + +KM+E D F Y+ ++D+L G +D A
Sbjct: 169 NVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLF 228
Query: 373 EEMFAKGLSA 382
+EM KG+ +
Sbjct: 229 KEMETKGIKS 238
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 129/266 (48%), Gaps = 9/266 (3%)
Query: 114 YKHVIEAQELCFGENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEE 167
Y + I + LC S L EM + + YN ++RG+ + K + E
Sbjct: 143 YNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANE 202
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M G L ++ I +D CK+GK +A+ L KEMK KG++ D++ Y ++IR
Sbjct: 203 MQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGE 262
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
+D ++ E+ E G P +T NT+I+ C+ GR++EA + M ++G P+V TY
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTG 322
Query: 288 FFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
L K +E L L + M++ P + TY +++ K + + + + M++
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRR 382
Query: 345 CSPDEFAYNALVDALIDKGMLDMARK 370
PD YN+L+ L KG LD A K
Sbjct: 383 TRPDNITYNSLLGGLCAKGDLDEASK 408
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 162/334 (48%), Gaps = 33/334 (9%)
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGLKD--EVSYCNLVDALCEYKHVIEA--------- 120
++ +R ++ L ++ + TF++ E L+ E S L +A+ ++ +++
Sbjct: 18 LVVRRLLSQRLCSKLVNTFSE-TETKLRSLCEDSNPQLKNAVSVFQQAVDSGGSLSFAGN 76
Query: 121 ---QELCFGENKNVGFSGLVEMNKTKIY------NMILRGWFKMSWWGKCREFWEEMDKR 171
L N V FS +M +T + + +L + +M G M KR
Sbjct: 77 NLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKR 136
Query: 172 GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFA 231
G ++++Y+I + +C++ + KAV L +EM++ + DVV+YNTVIR + ++ A
Sbjct: 137 GFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKA 196
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR- 290
+++ EM+ GC S+VT +I C+ G++ EA +L EM KG D+I Y R
Sbjct: 197 LQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRG 256
Query: 291 ---CLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
C E R LFD ++E G P TY L+R F + G L+ +++ M E G P
Sbjct: 257 FCDCGELDRGK-ALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRP 315
Query: 348 DEFAYNALVDALIDKG-------MLDMARKYDEE 374
+ + Y L+D L G +L++ + DEE
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEE 349
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 165/346 (47%), Gaps = 19/346 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+YN+VI + E + + L + M+ + S + T+ I+ + A ++EAMG +
Sbjct: 179 SYNTVIRGFCEGKELEKALQLANEMQGSGCSW-SLVTWGILIDAFCKAGKMDEAMGLLKE 237
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK---IYNMI 148
+ GL+ D + Y +L+ C+ + + L F ++E + YN +
Sbjct: 238 MKHKGLEADLIVYTSLIRGFCDCGELDRGKAL---------FDEVLERGDSPCAITYNTL 288
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+RG+ K+ + E +E M +RGV ++++Y+ +D +C GK +A++L M +K
Sbjct: 289 IRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDE 348
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ +VV YN +I + V A+ + M++ +P +T N+++ LC G + EA
Sbjct: 349 EPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASK 408
Query: 269 VLAEMPKKGCV--PDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRK 323
+L M K PDVI+++ L + + L ++D ++E + T +LL
Sbjct: 409 LLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNS 468
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
+ G + +WK++ P+ Y ++D GML++A+
Sbjct: 469 TLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAK 514
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 161/350 (46%), Gaps = 9/350 (2%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +ID L + + L++ M PN T+ I+ + LV +A+
Sbjct: 319 TYTGLIDGLCGVGKTKEALQLLNLMLQKDEE-PNVVTYNIIINKLCKDSLVADALEIVEL 377
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + + D ++Y +L+ LC + EA +L + K+ ++ ++ +N ++ G
Sbjct: 378 MKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVIS----FNALIHG 433
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + + + ++ + ++ D+ + +I ++ KSG KA++L+K++ I +
Sbjct: 434 LCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPN 493
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
Y T+I + ++ A + +MR PSV N ++ LC+ G + +A+ +
Sbjct: 494 SDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFE 553
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM + PDVI+++ K +I L M +G+ P + TY L+ +F + G
Sbjct: 554 EMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLG 613
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+L + KM + G PD ++++ I +G D ++ +++ K
Sbjct: 614 YLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDK 663
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 9/238 (3%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
F+ +M + + S S ++ + K A + M K+G +V YN +++
Sbjct: 93 SFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLK-- 150
Query: 223 GVSEGVDF--AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVP 280
G+ ++F A+ + REMR+ P VV+ NTVI+ CE + +A + EM GC
Sbjct: 151 GLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSW 210
Query: 281 DVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVW 337
++T+ K E +GL M G+ + Y L+R F G L ++
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALF 270
Query: 338 KKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
++ E G SP YN L+ G L A + E M +G+ +P T L+ G
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGV--RPNVYTYTGLIDG 326
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 91/201 (45%), Gaps = 3/201 (1%)
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
M + +S A Y++M + ++ V+ + ++ FA V M + G
Sbjct: 79 MATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGF 138
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LG 300
+V N ++K LC N +A ++L EM + +PDV++Y+ R + +E+ L
Sbjct: 139 AFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQ 198
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L + M SG + T+ +L+ F + G + + K+M+ G D Y +L+
Sbjct: 199 LANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFC 258
Query: 361 DKGMLDMARKYDEEMFAKGLS 381
D G LD + +E+ +G S
Sbjct: 259 DCGELDRGKALFDEVLERGDS 279
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 6/201 (2%)
Query: 187 MCKSGKPW--KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+C+ P AV ++++ G + A N ++ + S + A YR+M E
Sbjct: 46 LCEDSNPQLKNAVSVFQQAVDSGGSLSF-AGNNLMATLVRSRNHEVAFSFYRKMLETDTF 104
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGL 301
+ V+ + +++ + + A+ VLA M K+G +V Y+ + L + E + L
Sbjct: 105 INFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSL 164
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
M ++ + P + +Y ++R F L + +M+ GCS + L+DA
Sbjct: 165 LREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCK 224
Query: 362 KGMLDMARKYDEEMFAKGLSA 382
G +D A +EM KGL A
Sbjct: 225 AGKMDEAMGLLKEMKHKGLEA 245
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 119/292 (40%), Gaps = 37/292 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
TYNS++ L + D + L++ M KD+ + P+ +F + + +++A+ ++
Sbjct: 389 TYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYD 448
Query: 92 KL-DEFGLKDEVSYCNLVDALCEYKHVIEAQEL-----------------------CFGE 127
L ++ G D V+ L+++ + V +A EL C
Sbjct: 449 LLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTG 508
Query: 128 NKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
NV L +M +++ YN +L K + +EEM + D+ S++
Sbjct: 509 MLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFN 568
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
I +D K+G A L M G+ D+ Y+ +I +D A+ + +M +
Sbjct: 569 IMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDS 628
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD------VITYHC 287
G +P C++V+K G + + ++ K V D V+ Y C
Sbjct: 629 GFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMC 680
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 154/320 (48%), Gaps = 10/320 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PN F IMF Y ++ EAM FNK+ + GL D VS+ L+DALC+ V +A L
Sbjct: 334 PNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAV-L 392
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + N G + + + + +Y G + W K E + E+ +G+ D ++
Sbjct: 393 QFNQMINEGVTPNIFVFSSLVY-----GLCTVGKWEKAEELFFEVLDQGICVDAVFFNTL 447
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
M +C G+ +A +L M + G++ +V++YNT++ ++ +D A ++ M G
Sbjct: 448 MCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGL 507
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILG 300
+P+ T +++ C+ RV +AY++ EM KG P V TY+ L + E
Sbjct: 508 KPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANE 567
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L+ MI S + + TY ++L + F+ F +++++ D +N ++ AL+
Sbjct: 568 LYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALL 627
Query: 361 DKGMLDMARKYDEEMFAKGL 380
G + A + A GL
Sbjct: 628 KGGRKEDAMDLFATISAYGL 647
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 157/373 (42%), Gaps = 53/373 (14%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ + + + V +A F ++ + G+ + V+Y ++D LC+ + V A+
Sbjct: 159 PDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAK-- 216
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
G + + G+ N T YN ++ G+ W + + EEM G+ D +Y++
Sbjct: 217 --GVFQQMIDRGVKPDNGT--YNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALL 272
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV-------------------GV 224
+D +CK+G+ +A + M +KGIK DV Y ++ GV
Sbjct: 273 LDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGV 332
Query: 225 SEG----------------VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
S ++ AM ++ +MR+ G P VV+ +I LC+ GRV +A
Sbjct: 333 SPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVL 392
Query: 269 VLAEMPKKGCVPDVITYHCFFRCL------EKPREILGLFDRMIESGIRPKMDTYVMLLR 322
+M +G P++ + L EK E LF +++ GI + L+
Sbjct: 393 QFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEE---LFFEVLDQGICVDAVFFNTLMC 449
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
G + + M +G P+ +YN LV G +D A K + M + GL
Sbjct: 450 NLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGL-- 507
Query: 383 KPREELGTKLVQG 395
KP E T L++G
Sbjct: 508 KPNEFTYTILLRG 520
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 110/227 (48%), Gaps = 6/227 (2%)
Query: 173 VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM 232
V + +YSI + C+ G+ + + K G +++V+ + +++ + ++ VD A
Sbjct: 86 VAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEAT 145
Query: 233 RV-YREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC 291
+ M E GC P VV NTVI G+V +AY + EM +G P+V+TY
Sbjct: 146 DILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDG 205
Query: 292 LEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
L K + + G+F +MI+ G++P TY L+ + G + V + ++M G PD
Sbjct: 206 LCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPD 265
Query: 349 EFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
Y L+D L G AR + + MF KG+ KP + L+ G
Sbjct: 266 CITYALLLDYLCKNGRCREARLFFDSMFRKGI--KPDVAIYAILLHG 310
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 102/217 (47%), Gaps = 3/217 (1%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M + G D+ +Y+ ++ + G+ KA L+ EM +GI +VV Y TVI + ++
Sbjct: 152 MSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQV 211
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
VD A V+++M + G +P T N +I G+ +E +L EM G PD ITY
Sbjct: 212 VDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYAL 271
Query: 288 FFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
L K RE FD M GI+P + Y +LL + G L + M G
Sbjct: 272 LLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNG 331
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
SP+ +N + A K M++ A +M +GLS
Sbjct: 332 VSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLS 368
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 85/190 (44%), Gaps = 3/190 (1%)
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
L M + G DVVAYNTVI V+ A ++ EM + G P+VVT TVI LC
Sbjct: 148 LLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLC 207
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMD 315
+ V A V +M +G PD TY+C + K +E++ + + M G+ P
Sbjct: 208 KAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCI 267
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
TY +LL + G R + + M G PD Y L+ KG L + + M
Sbjct: 268 TYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLM 327
Query: 376 FAKGLSAKPR 385
G+S R
Sbjct: 328 VGNGVSPNRR 337
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 118/264 (44%), Gaps = 10/264 (3%)
Query: 83 VNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
V EA + + G++ V SY LV C + EA +L +V S ++ N+
Sbjct: 457 VMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLL-----DVMVSNGLKPNE 511
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
Y ++LRG+ K + EM +GV + +Y+ + + ++G+ +A +LY
Sbjct: 512 FT-YTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYL 570
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
M K D+ YN ++ + + VD A +++R + Q VT N +I L + G
Sbjct: 571 NMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGG 630
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYV 318
R +A + A + G VPDV+TY L + E GLF M +SG P
Sbjct: 631 RKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLN 690
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEE 342
L+R+ G + V K++E
Sbjct: 691 ALVRRLLHRGDISRAGVYLYKLDE 714
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 102/218 (46%), Gaps = 7/218 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PN ++ + + ++EA + + GLK +E +Y L+ C+ + V +A L
Sbjct: 474 PNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSL 533
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F E G + +V YN IL G F+ + + E + M D+++Y+I
Sbjct: 534 -FREMLMKGVTPVV-----ATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNII 587
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
++ +CK+ +A K+++ + K ++D V +N +I A+ + AM ++ + G
Sbjct: 588 LNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGL 647
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
P VVT + + L E G + E + + M K G P+
Sbjct: 648 VPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPN 685
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 141/283 (49%), Gaps = 12/283 (4%)
Query: 86 AMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI 144
A+ NK+++ ++ D V Y ++D+LC+Y+HV +A L F E N G V
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNL-FTEMDNKGIRPDVF-----T 277
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y+ ++ W +M +R + ++ +++ +D K GK +A KL+ EM
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 337
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
++ I ++V YN++I + + +D A +++ M C P VVT NT+I C+ +V
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVV 397
Query: 265 EAYAVLAEMPKKGCVPDVITY----HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVML 320
+ + +M ++G V + +TY H FF+ + + +F +M+ G+ P + TY L
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM-VFKQMVSDGVHPNIMTYNTL 456
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
L + G L VV++ +++ PD + YN + + + G
Sbjct: 457 LDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAG 499
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 170/364 (46%), Gaps = 34/364 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +VI+ L K E DL+ NL+++M+ + + + V++A+ F +
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIE-ADVVIYSTVIDSLCKYRHVDDALNLFTE 265
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGE-----NKNV-GFSGLV-------- 137
+D G++ +V +Y +L+ LC Y +A L N NV F+ L+
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325
Query: 138 ---------EMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
EM + I YN ++ G+ + ++ + M + + D+ +Y+
Sbjct: 326 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNT 385
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ CK+ K ++L+++M ++G+ + V Y T+I + D A V+++M G
Sbjct: 386 LINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG 445
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL--- 299
P+++T NT++ LC+NG++ +A V + K PD+ TY+ + K ++
Sbjct: 446 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGW 505
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
LF + G++P + Y ++ F + G + ++ KM+E G PD YN L+ A
Sbjct: 506 DLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAH 565
Query: 360 IDKG 363
+ G
Sbjct: 566 LRDG 569
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 153/332 (46%), Gaps = 17/332 (5%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
++ ++ + K +FDL + +M+ S N T+ IM ++ A+ K+
Sbjct: 68 FSKLLSAIAKMKKFDLVISFGEKMEILGVS-HNLYTYNIMINCLCRRSQLSFALAILGKM 126
Query: 94 DEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIYNMIL 149
+ G + N L++ C + EA L +VEM T + ++
Sbjct: 127 MKLGYGPSIVTLNSLLNGFCHGNRISEAVAL---------VDQMVEMGYQPDTVTFTTLV 177
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G F+ + + E M +G DL +Y ++ +CK G+P A+ L +M+K I+
Sbjct: 178 HGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE 237
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
DVV Y+TVI ++ VD A+ ++ EM G +P V T +++I LC GR +A +
Sbjct: 238 ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 297
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGR 326
L++M ++ P+V+T++ K +++ LFD MI+ I P + TY L+ F
Sbjct: 298 LSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM 357
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
L ++ M C PD YN L++
Sbjct: 358 HDRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 129/267 (48%), Gaps = 11/267 (4%)
Query: 119 EAQELCFGEN-KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
EA +L FGE K+ F +VE +K +L KM + F E+M+ GV +L
Sbjct: 48 EAVDL-FGEMVKSRPFPSIVEFSK------LLSAIAKMKKFDLVISFGEKMEILGVSHNL 100
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
++Y+I ++ +C+ + A+ + +M K G +V N+++ + A+ + +
Sbjct: 101 YTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ 160
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK--- 294
M EMG QP VT T++ L ++ + EA A++ M KGC PD++TY L K
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
P L L ++M + I + Y ++ ++ + ++ +M+ G PD F Y++
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLS 381
L+ L + G A + +M + ++
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKIN 307
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 129/293 (44%), Gaps = 51/293 (17%)
Query: 33 TYNSVIDIL---GKFFEFDLSWN-LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
T+NS+ID GK E + ++ +I R D PN T+ + + ++EA
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSID-----PNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 89 TFNKL-DEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
F + + L D V+Y L++ C+ K V++ EL +++ GLV T Y
Sbjct: 367 IFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF----RDMSRRGLV--GNTVTYTT 420
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK-- 205
++ G+F+ S + +++M GV ++ +Y+ +D +CK+GK KA+ +++ ++K
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Query: 206 ---------------------------------KGIKMDVVAYNTVIRAVGVSEGVDFAM 232
KG+K DV+AYNT+I + A
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAY 540
Query: 233 RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
++ +M+E G P T NT+I+ +G + ++ EM D TY
Sbjct: 541 TLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 593
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 7/205 (3%)
Query: 171 RGVVKDLHSYSIYMDIMCKSG----KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
RG+ SY Y + + ++ K +AV L+ EM K +V ++ ++ A+ +
Sbjct: 20 RGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMK 79
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
D + +M +G ++ T N +I LC ++ A A+L +M K G P ++T +
Sbjct: 80 KFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLN 139
Query: 287 CFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
+ E + L D+M+E G +P T+ L+ + + ++M
Sbjct: 140 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 199
Query: 344 GCSPDEFAYNALVDALIDKGMLDMA 368
GC PD Y A+++ L +G D+A
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLA 224
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 179/413 (43%), Gaps = 45/413 (10%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGK---------FFE----FDLSWN--- 52
+DW++AL F +++ Y +I I+G+ FE D+ WN
Sbjct: 52 SDWQKALRLFKYMQRHQWCKPNEHVYTIMIGIMGREGMLDKASELFEDMPLNDVEWNVYS 111
Query: 53 -------------------LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA-MGTFNK 92
L+ RMK + PN T+ + L E +G F +
Sbjct: 112 FTALINAYGRNGQHEASLHLLARMKREKVT-PNLITYNTVINACAKGGLEWEGLLGLFAQ 170
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ G++ ++ N + + C + ++E + F + + +G+V + T YN ++ +
Sbjct: 171 MRHEGIQPDIITYNTLLSACSSRGLVEEAGMVF---RTMNEAGVVPDSIT--YNALVDIY 225
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
+ E EM++ G D+ +Y+I ++ ++GK A K++K+M++ G DV
Sbjct: 226 GQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDV 285
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V ++T++ A G D ++ +M+E G +P V T NT+I++ + G +E+ + +
Sbjct: 286 VTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWD 345
Query: 273 MPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
+ G PD+ TY K + + M++S + P D + L+ +G
Sbjct: 346 LLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITAYGNAAL 405
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ M+E GC PD YNAL+ A G+ A M +G+SA
Sbjct: 406 YSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTMIDEGISA 458
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 134/321 (41%), Gaps = 32/321 (9%)
Query: 8 ANDWKRALEFFNWV-ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
A ++ A + F + E C T T++++++ GK +D L MK+ + P+
Sbjct: 263 AGKYRAAAKMFKQMQEAGC--TPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTE-PD 319
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCE----------YK 115
T+ + + + E++ F L + G++ ++S Y L+ + + ++
Sbjct: 320 VNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHR 379
Query: 116 HVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVK 175
H++++ + GF+GL+ T N L + + + M + G
Sbjct: 380 HMLQS----YVTPTTDGFTGLI----TAYGNAAL--------YSEATYAFNSMKESGCKP 423
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
DL +Y+ + G +A Y M +GI DV YN++I A G D A+
Sbjct: 424 DLETYNALIGAHAGGGLYCEAGSAYLTMIDEGISADVSTYNSLIEAFGRGGLFDDAIEFS 483
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP 295
R+M E C P+ T ++ + C G EA A ++ G +P V +Y C +
Sbjct: 484 RDMEEARCSPNRHTYEALMGVYCTAGLFDEAKAQFLDLQVGGELPSVDSY-CLLLSVCAR 542
Query: 296 REILGLFDRMIESGIRPKMDT 316
R +++E + P M +
Sbjct: 543 RNRWDDASKVLEEMLEPNMPS 563
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 148/326 (45%), Gaps = 16/326 (4%)
Query: 60 NPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVI 118
N +P + + Y + A TF ++ +K D ++Y L++ LC+ + +
Sbjct: 183 NAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERIT 242
Query: 119 EAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
AQ+L E ++ G + VE +N ++ + + KC EM + G+ ++
Sbjct: 243 NAQDLLM-EMQDNGVNPTVE-----TFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVV 296
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
SY ++ CK+GK +AV + +M K + + YN +I A D A + +M
Sbjct: 297 SYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 356
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCL 292
+ G PS+VT N +IK LC ++ EA ++ + +PD ++Y+ C+ +
Sbjct: 357 KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNI 416
Query: 293 EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
+K L L RM + GI+ + TY L+ G G L + +++KM + P +
Sbjct: 417 DKA---LDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIH 473
Query: 353 NALVDALIDKGMLDMARKYDEEMFAK 378
N +V+A G A +EM K
Sbjct: 474 NIMVEAYSKYGNEIKAEDLRKEMLQK 499
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 162/366 (44%), Gaps = 12/366 (3%)
Query: 25 CH-FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLV 83
CH TYN ++ L + + L+ M +P+ T+ I+F
Sbjct: 78 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQ-KMVPDGFTYSILFDGLSRNGDS 136
Query: 84 NEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKT 142
+ F K + G+ C+ L++ LC+ V A+E+ +++ +GLV
Sbjct: 137 KAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVL----QSLVNAGLVP--TR 190
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
IYN ++ G+ + + +M R + D +Y+ ++ +CK+ + A L E
Sbjct: 191 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 250
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M+ G+ V +NT+I A G + ++ V EM+E G +P+VV+ +++ C+NG+
Sbjct: 251 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 310
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCL--EKPR-EILGLFDRMIESGIRPKMDTYVM 319
+ EA A+L +M K +P+ Y+ P + L ++M +GI P + TY +
Sbjct: 311 IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNL 370
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L++ + + + PD +YN L+ A +G +D A + M G
Sbjct: 371 LIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 430
Query: 380 LSAKPR 385
+ + R
Sbjct: 431 IKSTVR 436
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 154/373 (41%), Gaps = 55/373 (14%)
Query: 53 LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDAL 111
++ RM + + PN ++ ++ A +A+ F+++ E L + ++Y ++D
Sbjct: 1 MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 60
Query: 112 C-----EYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE 166
E + Q +C G N YN++L G + G+ +
Sbjct: 61 IKGGDLEAGFRLRDQMVCHGLKPN-----------AITYNVLLSGLCRAGRMGETSALLD 109
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
EM + +V D +YSI D + ++G + L+ + K G+ + + ++ +
Sbjct: 110 EMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDG 169
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
V A V + + G P+ V NT+I C+ G + A++ +M + PD ITY+
Sbjct: 170 KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYN 229
Query: 287 CFFRCLEKPREILGLFDRMIE---SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
L K I D ++E +G+ P ++T+ L+ +GR G L F+V +M+E
Sbjct: 230 ALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQEN 289
Query: 344 GCSPDEFAY-----------------------------------NALVDALIDKGMLDMA 368
G P+ +Y NA++DA ++ G D A
Sbjct: 290 GLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQA 349
Query: 369 RKYDEEMFAKGLS 381
E+M + G+S
Sbjct: 350 FILVEKMKSNGIS 362
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 140/340 (41%), Gaps = 33/340 (9%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+PNH T+ M ++ + +++ GLK + ++Y L+ LC + E
Sbjct: 47 LPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSA 106
Query: 123 LCF----------GENKNVGFSGLVEMNKTKIY-------------------NMILRGWF 153
L G ++ F GL +K +++L G
Sbjct: 107 LLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLC 166
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
K E + + G+V Y+ ++ C++G+ A + +MK + IK D +
Sbjct: 167 KDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHI 226
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
YN +I + +E + A + EM++ G P+V T NT+I G++ + + VL+EM
Sbjct: 227 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 286
Query: 274 PKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
+ G P+V++Y K E + + D M + P Y ++ + G
Sbjct: 287 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPN 346
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
F++ +KM+ G SP YN L+ L ++ + A +
Sbjct: 347 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE 386
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 112/258 (43%), Gaps = 16/258 (6%)
Query: 24 DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLV 83
D T +T+N++ID G+ + + + ++ M++N PN ++ + + +
Sbjct: 253 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK-PNVVSYGSIVNAFCKNGKI 311
Query: 84 NEAMGTFNKLDEFGLKDEVS----YCNLVDALCEYKHVIEAQELCFGEN-KNVGFSGLVE 138
EA+ LD+ KD + Y ++DA E H Q E K+ G S +
Sbjct: 312 PEAVAI---LDDMFHKDVLPNAQVYNAIIDAYVE--HGPNDQAFILVEKMKSNGISPSI- 365
Query: 139 MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK 198
YN++++G S + E + ++ D SY+ + C G KA+
Sbjct: 366 ----VTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALD 421
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
L + M K GIK V Y+ +I +G + ++ +Y++M + PS N +++
Sbjct: 422 LQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYS 481
Query: 259 ENGRVREAYAVLAEMPKK 276
+ G +A + EM +K
Sbjct: 482 KYGNEIKAEDLRKEMLQK 499
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 173/414 (41%), Gaps = 48/414 (11%)
Query: 21 VETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTA 80
V C TYN +I L KF + + + ++ M PN TF ++ + Y
Sbjct: 70 VMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMI-TLGCKPNSRTFCLLIEGYCRE 128
Query: 81 HLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEM 139
H + A+ +++++ L VSY +++ LC K + A +L + + FSGL
Sbjct: 129 HNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLL----EKMTFSGLKP- 183
Query: 140 NKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKL 199
+Y+ ++ G+ + R + M GV D+ Y+ + + K+GK +A
Sbjct: 184 -NVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 242
Query: 200 YKEMKKKGIKMDVVAYNTVI----RAVGVSEGVDF------------------------- 230
E++ +G+K D V + I + ++E +
Sbjct: 243 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFK 302
Query: 231 ------AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
A+ ++R + +G P V TC+ I L +NGRV+EA V +E+ +KG VPDV T
Sbjct: 303 AGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFT 362
Query: 285 YHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKME 341
Y K E+ L D M GI P + Y L+ + G ++ ++ M
Sbjct: 363 YSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP 422
Query: 342 ELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
E G PD Y+ ++D + A EM +KG+ +P + LV G
Sbjct: 423 EKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGV--QPHSFVYNALVHG 474
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 153/350 (43%), Gaps = 33/350 (9%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNL----------VDALCE 113
+PN T+ I+ A +NEA TF ++ + GLK + + C+ +D +
Sbjct: 7 VPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLR 66
Query: 114 YKHVIEA--------------QELC-FGENKNVG--FSGLVEMN---KTKIYNMILRGWF 153
K V+ + LC FG+ + G++ + ++ + +++ G+
Sbjct: 67 IKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYC 126
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
+ G+ E +EM+KR +V SY ++ +C A KL ++M G+K +VV
Sbjct: 127 REHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVV 186
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
Y+T+I ++ A R+ M G P + N +I L + G++ EA L E+
Sbjct: 187 VYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 246
Query: 274 PKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
+G PD +T+ F K E FD M++ G+ P Y +L+ + G L
Sbjct: 247 QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNL 306
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+++ + LG PD +A + L+ G + A K E+ KGL
Sbjct: 307 MEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGL 356
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 151/343 (44%), Gaps = 32/343 (9%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQE 122
+PN+ + ++ + A + EA+ F L G+ +V C+ + L + V EA +
Sbjct: 287 MPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALK 346
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ F E K G + Y+ ++ G+ K K E +EM +G+ ++ Y+
Sbjct: 347 V-FSELKEKGL-----VPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 400
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D +CKSG +A KL+ M +KG++ D V Y+T+I SE V A ++ EM G
Sbjct: 401 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 460
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF-----RCLEKPRE 297
QP N ++ C+ G + +A + EM +KG ++++ C K +E
Sbjct: 461 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSC--KIQE 517
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWG-----------------FLRPVFVVWKKM 340
LF MI I P TY ++ + G + VF +++KM
Sbjct: 518 ASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKM 577
Query: 341 EELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAK 383
G PDE Y ++ A + L A K +E+ KG+ K
Sbjct: 578 VAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTK 620
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 167/372 (44%), Gaps = 12/372 (3%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN++I L K + + + + ++ P+ TF Y + EA F+++
Sbjct: 223 YNAIISCLSKAGKMEEASTYLLEIQGRGLK-PDAVTFGAFILGYSKTGKMTEAAKYFDEM 281
Query: 94 DEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ GL + Y L++ + +++EA + F +G + + + + G
Sbjct: 282 LDHGLMPNNPLYTVLINGHFKAGNLMEALSI-FRHLHALGV-----LPDVQTCSAFIHGL 335
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K + + + E+ ++G+V D+ +YS + CK G+ KA +L+ EM KGI ++
Sbjct: 336 LKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNI 395
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
YN ++ + S + A +++ M E G +P VT +T+I C++ V EA+++ E
Sbjct: 396 FIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE 455
Query: 273 MPKKGCVPDVITYHCFFR--CLEKPRE-ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
MP KG P Y+ C E E + LF M++ G + ++ L+ + +
Sbjct: 456 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCK 514
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELG 389
++ ++++M PD Y ++D G ++ A +EM + L L
Sbjct: 515 IQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALF 574
Query: 390 TKLVQGGLDGEQ 401
K+V G+ ++
Sbjct: 575 EKMVAKGVKPDE 586
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 117/253 (46%), Gaps = 5/253 (1%)
Query: 131 VGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS 190
+G GLV T Y +I G + + + +EEM K G+ D ++ S +D +
Sbjct: 1 MGEKGLVP--NTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMRE 58
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTC 250
G + +++ M GI ++++ YN +I + ++ A + + M +GC+P+ T
Sbjct: 59 GDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTF 118
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIE 307
+I+ C + A +L EM K+ VP ++Y L +++ L ++M
Sbjct: 119 CLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTF 178
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
SG++P + Y L+ + G + + M G +PD F YNA++ L G ++
Sbjct: 179 SGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEE 238
Query: 368 ARKYDEEMFAKGL 380
A Y E+ +GL
Sbjct: 239 ASTYLLEIQGRGL 251
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 148/347 (42%), Gaps = 29/347 (8%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+S+I K E + ++ L M + PN + + + + A F+
Sbjct: 362 TYSSLISGFCKQGEVEKAFELHDEMCLKGIA-PNIFIYNALVDGLCKSGDIQRARKLFDG 420
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E GL+ D V+Y ++D C+ ++V EA L F E + G + +YN ++ G
Sbjct: 421 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSL-FHEMPSKGVQ-----PHSFVYNALVHG 474
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K K + EM ++G L S++ +D CKS K +A +L++EM K I D
Sbjct: 475 CCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPD 533
Query: 212 VVAYNTVI----RAVGVSEG-------------VDFAMRVYREMREMGCQPSVVTCNTVI 254
V Y TVI +A + E VD ++ +M G +P VT VI
Sbjct: 534 HVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVI 593
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIR 311
C+ + EA+ + E+ KG + + L E E L D M E G++
Sbjct: 594 YAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLK 653
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
P + L+R F G + V++ ++ LG PD LV+
Sbjct: 654 PSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 700
>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 174/394 (44%), Gaps = 22/394 (5%)
Query: 7 YANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
+ D +AL+FFNW + + +THT +Y S+++ILG+ + + N + ++ I
Sbjct: 88 FLRDTSKALQFFNWAQ-EMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVK 146
Query: 67 HAT--FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
F + + + A L E++ F + G+ V ++ +L+ L + A+++
Sbjct: 147 LEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKV 206
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
G + T +N+++RG+ + ++ + G D+ +Y+
Sbjct: 207 YDEMLSTYGVTP-----DTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTL 261
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMD--VVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+D +C++GK A + K M KK + ++ VV Y T+IR ++ A+ V+ EM
Sbjct: 262 VDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQ 321
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV-PDVITYHCFFRC---LEKPRE 297
G + + +T NT+IK LCE + + +L G PD T++ C +
Sbjct: 322 GLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDD 381
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL-------GCSPDEF 350
L +F+RM E I+P TY L+R + G + K+ E GC P
Sbjct: 382 ALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVA 441
Query: 351 AYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
AYN + L + G A K ++ +G P
Sbjct: 442 AYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPP 475
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 160/352 (45%), Gaps = 25/352 (7%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+NS++ IL K +++ + M P+ TF I+ + + +V++ FN
Sbjct: 186 TFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFND 245
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI-YNMILR 150
L FG + D V+Y LVD LC V A + G K V++N + Y ++R
Sbjct: 246 LSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKS-----VDLNPNVVTYTTLIR 300
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG-IK 209
G+ K +EEM +G+ + +Y+ + +C++ K K + + G
Sbjct: 301 GYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFS 360
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
D +NT++ + +D A++V+ M E+ QP T + +++ LC+ G +A +
Sbjct: 361 PDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDL 420
Query: 270 LAEMPKK-------GCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIR--PKMDTY 317
L ++ ++ GC P V Y+ F+ L K ++ F +++ G + P T
Sbjct: 421 LDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTL 480
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI--DKGMLDM 367
+M K G + + V+ + + L PD Y +L++ L+ DK +L +
Sbjct: 481 IMGHCKEGTFESGYELLVLMLRKDFL---PDFETYESLINGLLHMDKPLLAL 529
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 154/368 (41%), Gaps = 22/368 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI-PNHATFRIMFKRYVTAHLVNEAMGTFN 91
TYN+++D L + + +++N++ M + PN T+ + + Y + +A+ F
Sbjct: 257 TYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFE 316
Query: 92 KLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
++ GLK + ++Y L+ LCE + + +++ G + FS T +N ++
Sbjct: 317 EMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSP-----DTCTFNTLMH 371
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK---- 206
+ +E M + + D +YS + +C+ G KA L ++ ++
Sbjct: 372 CHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILL 431
Query: 207 ---GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ--PSVVTCNTVIKLLCENG 261
G K V AYN + + + + A + +R++ G Q PS T+I C+ G
Sbjct: 432 SGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSY---KTLIMGHCKEG 488
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYV 318
Y +L M +K +PD TY L +KP L ++M+ S RP T+
Sbjct: 489 TFESGYELLVLMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFH 548
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+L K G + + M + + V L GM D A + ++ K
Sbjct: 549 SILAKLLEQGRTSESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYGK 608
Query: 379 GLSAKPRE 386
G S K E
Sbjct: 609 GYSVKMEE 616
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 99/240 (41%), Gaps = 34/240 (14%)
Query: 159 GKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG---IKMDVVAY 215
K +F+ + G SY ++I+ ++ A ++K+ +K++ +
Sbjct: 93 SKALQFFNWAQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFF 152
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
N+++R + +++V+ M+ G PSVVT N+++ +L + GR A V EM
Sbjct: 153 NSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEM-- 210
Query: 276 KGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFV 335
+ TY G+ P T+ +L+R F G + F
Sbjct: 211 ------LSTY-----------------------GVTPDTFTFNILIRGFCMNGMVDDGFR 241
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
++ + GC PD YN LVD L G + +A + M K + P T L++G
Sbjct: 242 IFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRG 301
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 70/167 (41%), Gaps = 30/167 (17%)
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
TV++ +G A++ + +EMG + + +++++L N + A L + K
Sbjct: 80 TTVLQTLGFLRDTSKALQFFNWAQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEK 139
Query: 276 KGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFV 335
+ R I+ L R S L+R F R G +
Sbjct: 140 RS------------------RGIVKLEARFFNS-----------LMRNFNRAGLFQESIK 170
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK-YDEEMFAKGLS 381
V+ M+ G SP +N+L+ L+ +G +MA+K YDE + G++
Sbjct: 171 VFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVT 217
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 175/421 (41%), Gaps = 61/421 (14%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A RALE + T YN+VI + +++ M++ P
Sbjct: 494 CSAGKPARALELLRQMPRPNAVT-----YNTVIAGFCSRGRVQAALDIMREMRERGGIAP 548
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV------------SYCN------- 106
N T+ + + V+EA+ F DE K EV YC+
Sbjct: 549 NQYTYGTVISGWCKVGRVDEAVKVF---DEMLTKGEVKPEAVMYNALIGGYCDQGKLDTA 605
Query: 107 ---------------------LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
LV AL EA EL + +G GL Y
Sbjct: 606 LLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV----EEMGGKGLAP--DVFTY 659
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N+++ G K K E +E M +RGV + +Y+ + + K G+ + KL+ E +
Sbjct: 660 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 719
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+GI+ D+V YN +I + S +D A + EM + P VT NT+++ LC GRV E
Sbjct: 720 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 779
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLE---KPREILGLFDRMIESGIRPKMDTYVMLLR 322
A ++ EM ++G PD++TY+ ++ L + + M+ G P + TY L++
Sbjct: 780 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 839
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ G + K+M E G +PD+ Y +L++ L + R D+E A +A
Sbjct: 840 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTED----ERAIDDERLAAADAA 895
Query: 383 K 383
K
Sbjct: 896 K 896
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 9/209 (4%)
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+++I + +C +GKP +A++L ++M + + V YNTVI V A+ + REM
Sbjct: 485 TFNIMLRHLCSAGKPARALELLRQMPRP----NAVTYNTVIAGFCSRGRVQAALDIMREM 540
Query: 239 REM-GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV-PDVITYHCFFR--CLEK 294
RE G P+ T TVI C+ GRV EA V EM KG V P+ + Y+ C +
Sbjct: 541 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 600
Query: 295 PREILGLF-DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
+ L+ DRM+E G+ + TY +L+ G + + ++M G +PD F YN
Sbjct: 601 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 660
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGLSA 382
L++ +G + A + E M +G+ A
Sbjct: 661 ILINGHCKEGNVKKALEIFENMSRRGVRA 689
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 9/191 (4%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A L+ +M + + + +N ++R + + A+ + R+M +P+ VT NTVI
Sbjct: 467 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIA 522
Query: 256 LLCENGRVREAYAVLAEMPKKGCV-PDVITYHCFFRC---LEKPREILGLFDRMIESG-I 310
C GRV+ A ++ EM ++G + P+ TY + + E + +FD M+ G +
Sbjct: 523 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 582
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
+P+ Y L+ + G L + +M E G + YN LV AL G A +
Sbjct: 583 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 642
Query: 371 YDEEMFAKGLS 381
EEM KGL+
Sbjct: 643 LVEEMGGKGLA 653
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 148/326 (45%), Gaps = 16/326 (4%)
Query: 60 NPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVI 118
N +P + + Y + A TF ++ +K D ++Y L++ LC+ + +
Sbjct: 231 NAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERIT 290
Query: 119 EAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
AQ+L E ++ G + VE +N ++ + + KC EM + G+ ++
Sbjct: 291 NAQDLLM-EMQDNGVNPTVE-----TFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVV 344
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
SY ++ CK+GK +AV + +M K + + YN +I A D A + +M
Sbjct: 345 SYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 404
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCL 292
+ G PS+VT N +IK LC ++ EA ++ + +PD ++Y+ C+ +
Sbjct: 405 KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNI 464
Query: 293 EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
+K L L RM + GI+ + TY L+ G G L + +++KM + P +
Sbjct: 465 DKA---LDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIH 521
Query: 353 NALVDALIDKGMLDMARKYDEEMFAK 378
N +V+A G A +EM K
Sbjct: 522 NIMVEAYSKYGNEIKAEDLRKEMLQK 547
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 162/366 (44%), Gaps = 12/366 (3%)
Query: 25 CH-FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLV 83
CH TYN ++ L + + L+ M +P+ T+ I+F
Sbjct: 126 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQ-KMVPDGFTYSILFDGLSRNGDS 184
Query: 84 NEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKT 142
+ F K + G+ C+ L++ LC+ V A+E+ +++ +GLV
Sbjct: 185 KAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVL----QSLVNAGLVP--TR 238
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
IYN ++ G+ + + +M R + D +Y+ ++ +CK+ + A L E
Sbjct: 239 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 298
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M+ G+ V +NT+I A G + ++ V EM+E G +P+VV+ +++ C+NG+
Sbjct: 299 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 358
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCL--EKPR-EILGLFDRMIESGIRPKMDTYVM 319
+ EA A+L +M K +P+ Y+ P + L ++M +GI P + TY +
Sbjct: 359 IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNL 418
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L++ + + + PD +YN L+ A +G +D A + M G
Sbjct: 419 LIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 478
Query: 380 LSAKPR 385
+ + R
Sbjct: 479 IKSTVR 484
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 154/373 (41%), Gaps = 55/373 (14%)
Query: 53 LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDAL 111
++ RM + + PN ++ ++ A +A+ F+++ E L + ++Y ++D
Sbjct: 49 MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 108
Query: 112 C-----EYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE 166
E + Q +C G N YN++L G + G+ +
Sbjct: 109 IKGGDLEAGFRLRDQMVCHGLKPN-----------AITYNVLLSGLCRAGRMGETSALLD 157
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
EM + +V D +YSI D + ++G + L+ + K G+ + + ++ +
Sbjct: 158 EMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDG 217
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
V A V + + G P+ V NT+I C+ G + A++ +M + PD ITY+
Sbjct: 218 KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYN 277
Query: 287 CFFRCLEKPREILGLFDRMIE---SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
L K I D ++E +G+ P ++T+ L+ +GR G L F+V +M+E
Sbjct: 278 ALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQEN 337
Query: 344 GCSPDEFAY-----------------------------------NALVDALIDKGMLDMA 368
G P+ +Y NA++DA ++ G D A
Sbjct: 338 GLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQA 397
Query: 369 RKYDEEMFAKGLS 381
E+M + G+S
Sbjct: 398 FILVEKMKSNGIS 410
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 140/340 (41%), Gaps = 33/340 (9%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+PNH T+ M ++ + +++ GLK + ++Y L+ LC + E
Sbjct: 95 LPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSA 154
Query: 123 LCF----------GENKNVGFSGLVEMNKTKIY-------------------NMILRGWF 153
L G ++ F GL +K +++L G
Sbjct: 155 LLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLC 214
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
K E + + G+V Y+ ++ C++G+ A + +MK + IK D +
Sbjct: 215 KDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHI 274
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
YN +I + +E + A + EM++ G P+V T NT+I G++ + + VL+EM
Sbjct: 275 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 334
Query: 274 PKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
+ G P+V++Y K E + + D M + P Y ++ + G
Sbjct: 335 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPN 394
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
F++ +KM+ G SP YN L+ L ++ + A +
Sbjct: 395 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE 434
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 112/258 (43%), Gaps = 16/258 (6%)
Query: 24 DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLV 83
D T +T+N++ID G+ + + + ++ M++N PN ++ + + +
Sbjct: 301 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK-PNVVSYGSIVNAFCKNGKI 359
Query: 84 NEAMGTFNKLDEFGLKDEVS----YCNLVDALCEYKHVIEAQELCFGEN-KNVGFSGLVE 138
EA+ LD+ KD + Y ++DA E H Q E K+ G S +
Sbjct: 360 PEAVAI---LDDMFHKDVLPNAQVYNAIIDAYVE--HGPNDQAFILVEKMKSNGISPSI- 413
Query: 139 MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK 198
YN++++G S + E + ++ D SY+ + C G KA+
Sbjct: 414 ----VTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALD 469
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
L + M K GIK V Y+ +I +G + ++ +Y++M + PS N +++
Sbjct: 470 LQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYS 529
Query: 259 ENGRVREAYAVLAEMPKK 276
+ G +A + EM +K
Sbjct: 530 KYGNEIKAEDLRKEMLQK 547
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 127/280 (45%), Gaps = 44/280 (15%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY-KEM 203
YN +L S R M + GV ++++Y+I + +C G+ +A+ + +M
Sbjct: 123 YNAVLLALSDASLP-SARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDM 181
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR- 262
+ G +VV YNT++ A + VD A R+ MRE G +PS+VT NTV+ LC+ GR
Sbjct: 182 RGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRM 241
Query: 263 ----------------------------------VREAYAVLAEMPKKGCVPDVITY--- 285
+ EA AV AEM +KG VPDV+T+
Sbjct: 242 EDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSL 301
Query: 286 -HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
H R R + L +M E G+R T+ L+ F R GFL + K+M E
Sbjct: 302 IHAMCRAGNLERAV-ALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECR 360
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
P YN L++ G +D AR+ EM AKG+ KP
Sbjct: 361 IQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGM--KP 398
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 182/412 (44%), Gaps = 53/412 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N+V++ L K + + + M P+ ++ + Y A ++EA+ F +
Sbjct: 227 TFNTVVNGLCKAGRMEDARKMFDEMA-REGLTPDGVSYNTLVSGYCKAGCLHEALAVFAE 285
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG-------FSGLV------- 137
+ + G+ D V++ +L+ A+C ++ A L G+ + G F+ L+
Sbjct: 286 MAQKGVVPDVVTFTSLIHAMCRAGNLERAVAL-VGQMRERGLRMNEFTFTALIDGFCRNG 344
Query: 138 ----------EMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
EM + +I YN+++ G+ K+ + RE EM+ +G+ D+ +YS
Sbjct: 345 FLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYS 404
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+ CK G A +L ++M KKG+ D + Y+++IR + + A ++ +M ++
Sbjct: 405 TILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQL 464
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF-------RCLEK 294
G QP T T+I C+ G V++A ++ EM KKG +PDV+TY R E
Sbjct: 465 GLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEA 524
Query: 295 PREILGL-----------FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
R + L ++ ++ + + V LL+ F G + V++ M +
Sbjct: 525 QRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDR 584
Query: 344 GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
D Y+ L+ G + A + +++ G S P LV+G
Sbjct: 585 HWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFS--PNSTSTISLVRG 634
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 107/246 (43%), Gaps = 46/246 (18%)
Query: 172 GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIR----------A 221
G L +Y+ + + + P A +L M + G+ +V YN ++R A
Sbjct: 115 GYAPSLLAYNAVLLALSDASLP-SARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 222 VGV--------------------------SEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
+GV + VD A R+ MRE G +PS+VT NTV+
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESG 309
LC+ GR+ +A + EM ++G PD ++Y +C CL E L +F M + G
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLH---EALAVFAEMAQKG 290
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
+ P + T+ L+ R G L + +M E G +EF + AL+D G LD A
Sbjct: 291 VVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDAL 350
Query: 370 KYDEEM 375
+EM
Sbjct: 351 LAMKEM 356
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 5/178 (2%)
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
G ++AYN V+ A+ + A R+ M G P+V T N +++ LC G+ EA
Sbjct: 115 GYAPSLLAYNAVLLALS-DASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 267 YAVLA-EMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLR 322
V+ +M GC P+V+TY+ + E+ L M E G+RP + T+ ++
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ G + ++ +M G +PD +YN LV G L A EM KG+
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGV 291
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 69/144 (47%), Gaps = 5/144 (3%)
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREI 298
G PS++ N V+ L + + A +LA M + G P+V TY+ R L + E
Sbjct: 115 GYAPSLLAYNAVL-LALSDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 299 LGLF-DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
LG+ D M +G P + TY L+ F R G + + M E G P +N +V+
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233
Query: 358 ALIDKGMLDMARKYDEEMFAKGLS 381
L G ++ ARK +EM +GL+
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLT 257
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 73/168 (43%), Gaps = 10/168 (5%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ + + V +A+ +++ + G L D V+Y L+D L + EAQ L
Sbjct: 468 PDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRL 527
Query: 124 CF------GENKNVGFSGLVEMNKTKIYNMI---LRGWFKMSWWGKCREFWEEMDKRGVV 174
F N+ + L+ +T + + L+G+ + + ++ M R
Sbjct: 528 LFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWK 587
Query: 175 KDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
D YS+ + C+ G KA+ +K++ + G + + +++R +
Sbjct: 588 LDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGL 635
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 159/361 (44%), Gaps = 45/361 (12%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA--- 120
P+ TF + V EA+ +++ E GL+ D+++Y VD +C+ + A
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239
Query: 121 ----QELCFGENKNVGFSGLV-----------------EMNKTKI------YNMILRGWF 153
+E+ + V +S ++ EM I YN ++ G+
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
W + +EM +R + ++ +Y+ ++ K GK ++A +LY EM +GI + +
Sbjct: 300 ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 359
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
YN++I + +D A ++ M GC P V T T+I C R+ + +L EM
Sbjct: 360 TYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 419
Query: 274 PKKGCVPDVITYHCFFR--CLEKP-REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
P++G V + +TY+ CL L L +MI SG+ P + T LL G L
Sbjct: 420 PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKL 479
Query: 331 RPVFVVWKKMEEL-----------GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ ++K M++ G PD YN L+ LI++G A + EEM +G
Sbjct: 480 KDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRG 539
Query: 380 L 380
+
Sbjct: 540 I 540
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 167/392 (42%), Gaps = 22/392 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C D AL +E H Y+++ID L K S NL M+D P
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDK-GIFP 286
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N T+ M + + + A ++ E + + V+Y L++A + EA EL
Sbjct: 287 NIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAEL- 345
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+ E G + T YN ++ G+ K + + M +G D+ +++ +
Sbjct: 346 YDEMLPRGI-----IPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLI 400
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D C + + ++L EM ++G+ + V YNT+I + ++ A+ + ++M G
Sbjct: 401 DGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVC 460
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEM-----------PKKGCVPDVITYHCFFRCLE 293
P +VTCNT++ LC+NG++++A + M P G PDV+TY+ L
Sbjct: 461 PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLI 520
Query: 294 KPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF 350
+ L L++ M GI P TY ++ + L ++ M SP+
Sbjct: 521 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVV 580
Query: 351 AYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+N L++ G +D + EM +G+ A
Sbjct: 581 TFNTLINGYCKAGRVDDGLELFCEMGRRGIVA 612
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 145/320 (45%), Gaps = 15/320 (4%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGE 127
+F I+ K + + + A+ TF KL + GL D V++ L+ LC V EA +L
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDL---- 173
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
F + + + ++ G + + + M + G+ D +Y ++D M
Sbjct: 174 -----FHQICRPD-VLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227
Query: 188 CKSGKPWKAVKLYKEMKK-KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
CK G A+ L ++M++ IK +VV Y+ +I + + ++ EM++ G P+
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPN 287
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFD 303
+VT N +I C +GR A +L EM ++ P+V+TY+ K E L+D
Sbjct: 288 IVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYD 347
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
M+ GI P TY ++ F + L ++ M GCSPD F + L+D
Sbjct: 348 EMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAK 407
Query: 364 MLDMARKYDEEMFAKGLSAK 383
+D + EM +GL A
Sbjct: 408 RIDDGMELLHEMPRRGLVAN 427
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 138/309 (44%), Gaps = 22/309 (7%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T TYNS+ID K D + ++ + M S P+ TF + Y A +++ M
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCS-PDVFTFTTLIDGYCGAKRIDDGMELL 416
Query: 91 NKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+++ GL + V+Y L+ C + A +L ++ + SG+ T N +L
Sbjct: 417 HEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDL----SQQMISSGVCPDIVT--CNTLL 470
Query: 150 RGWFKMSWWGKCREFWEEMDK-----------RGVVKDLHSYSIYMDIMCKSGKPWKAVK 198
G E ++ M K GV D+ +Y+I + + GK +A +
Sbjct: 471 DGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEE 530
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
LY+EM +GI D + Y+++I + +D A +++ M P+VVT NT+I C
Sbjct: 531 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYC 590
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMD 315
+ GRV + + EM ++G V D I Y FR + L +F MI SG+ P
Sbjct: 591 KAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTI 650
Query: 316 TYVMLLRKF 324
T +L F
Sbjct: 651 TIRNMLTGF 659
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 123/259 (47%), Gaps = 16/259 (6%)
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
GE+ GF G E K + G +++ + + +M + + + ++ M
Sbjct: 38 GESGEAGFRG--ESLKLR------SGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMG 89
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
+ + +P + LY++M++K I+ D+ ++ +I+ + FA+ + ++ ++G P
Sbjct: 90 AVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHP 149
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLF 302
VVT T++ LC + RV EA + ++ C PDV+T+ C E + E + L
Sbjct: 150 DVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALL 205
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG-CSPDEFAYNALVDALID 361
DRM+E+G++P TY + + G + +KMEE+ P+ Y+A++D L
Sbjct: 206 DRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCK 265
Query: 362 KGMLDMARKYDEEMFAKGL 380
G + EM KG+
Sbjct: 266 DGRHSDSHNLFIEMQDKGI 284
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 115/284 (40%), Gaps = 46/284 (16%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+ ++ID D L+H M + N T+ + + +N A+ +
Sbjct: 395 TFTTLIDGYCGAKRIDDGMELLHEMPRR-GLVANTVTYNTLIHGFCLVGDLNAALDLSQQ 453
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNV-------GFSGLVEMNKTKI 144
+ G+ ++ CN L+D LC+ + +A E+ K+ F+G VE +
Sbjct: 454 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNG-VEPD-VLT 511
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK--------------- 189
YN+++ G + + E +EEM RG+V D +YS +D +CK
Sbjct: 512 YNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMG 571
Query: 190 --------------------SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVD 229
+G+ ++L+ EM ++GI D + Y T+I ++
Sbjct: 572 SKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNIN 631
Query: 230 FAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
A+ +++EM G P +T ++ + A A+L ++
Sbjct: 632 GALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 77/176 (43%), Gaps = 7/176 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ I+ + EA + ++ G+ D ++Y +++D LC+ + EA ++
Sbjct: 507 PDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 566
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + FS +N ++ G+ K E + EM +RG+V D Y
Sbjct: 567 -FVSMGSKSFS-----PNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITL 620
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
+ K G A+ +++EM G+ D + ++ E ++ A+ + +++
Sbjct: 621 IYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676
>gi|326529783|dbj|BAK04838.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 490
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 155/353 (43%), Gaps = 8/353 (2%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T TYN +ID + DL R+ P+ T+ + + + EA+
Sbjct: 99 TYTYNILIDCCHRACRPDLGPAFFGRLLKT-GITPDVITYSSLLQCFCDMKRTEEALDLL 157
Query: 91 NKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
L D +SY ++ + C+ A +L + + G YN+++
Sbjct: 158 LHRVSGDLPDAISYSVILKSFCDDGRSQCALDLL----RMMAEKGAEHSPSVVSYNLVIH 213
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
G+FK K + M ++G V D+ +Y+ ++ +CK+ KA + + M ++
Sbjct: 214 GFFKEGEISKACHLFHGMIQQGYVPDVVTYNSVINALCKARAMDKAEVVLRSMVHNSVQP 273
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
D V YN++I + + R+ + MR G PS+VTC++V+ LC++G+++EA +
Sbjct: 274 DAVTYNSLIHGYLILGQLKETFRLLKVMRSQGVMPSLVTCSSVMDYLCKHGKIKEAEEMF 333
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPREILGLFDR---MIESGIRPKMDTYVMLLRKFGRW 327
G PD++ Y ++ + D M G+ P + + +L+ + ++
Sbjct: 334 YSRAVNGRKPDIVLYSIMLHGYAIEGSLVKMIDLCEVMARDGVVPDLPCFNILINAYAKY 393
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G + + ++ M + G P+EF Y ++ A G +D A + EM G+
Sbjct: 394 GMMDVAMLFFEDMLKQGVKPNEFTYLTVISAFCKMGRMDDAMEKFSEMIDMGV 446
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 14/217 (6%)
Query: 173 VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV----GVSEGV 228
+ D ++Y+I +D ++ +P + + K GI DV+ Y+++++ E +
Sbjct: 95 IAPDTYTYNILIDCCHRACRPDLGPAFFGRLLKTGITPDVITYSSLLQCFCDMKRTEEAL 154
Query: 229 DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGC--VPDVITYH 286
D + R G P ++ + ++K C++GR + A +L M +KG P V++Y+
Sbjct: 155 DLLLH-----RVSGDLPDAISYSVILKSFCDDGRSQCALDLLRMMAEKGAEHSPSVVSYN 209
Query: 287 CFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
K EI LF MI+ G P + TY ++ + + VV + M
Sbjct: 210 LVIHGFFKEGEISKACHLFHGMIQQGYVPDVVTYNSVINALCKARAMDKAEVVLRSMVHN 269
Query: 344 GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
PD YN+L+ + G L + + M ++G+
Sbjct: 270 SVQPDAVTYNSLIHGYLILGQLKETFRLLKVMRSQGV 306
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 103/256 (40%), Gaps = 43/256 (16%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNSVI+ L K D + ++ M N S P+ T+ + Y+ + E
Sbjct: 242 TYNSVINALCKARAMDKAEVVLRSMVHN-SVQPDAVTYNSLIHGYLILGQLKETFRLLKV 300
Query: 93 LDEFGLKDEVSYCNLV-DALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G+ + C+ V D LC++ + EA+E+ + N +V +Y+++L
Sbjct: 301 MRSQGVMPSLVTCSSVMDYLCKHGKIKEAEEMFYSRAVNGRKPDIV------LYSIML-- 352
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
H Y+I G K + L + M + G+ D
Sbjct: 353 --------------------------HGYAI-------EGSLVKMIDLCEVMARDGVVPD 379
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ +N +I A +D AM + +M + G +P+ T TVI C+ GR+ +A +
Sbjct: 380 LPCFNILINAYAKYGMMDVAMLFFEDMLKQGVKPNEFTYLTVISAFCKMGRMDDAMEKFS 439
Query: 272 EMPKKGCVPDVITYHC 287
EM G D Y C
Sbjct: 440 EMIDMGVPLDTEVYMC 455
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 174/396 (43%), Gaps = 29/396 (7%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
KR +F + + + F +T ++ +++ LGKF DL+ ++ +M N P+ TF
Sbjct: 148 KRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKML-NSGIRPSLLTFN 206
Query: 72 IMFKRYVTAHLVNEA---MGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGEN 128
M V EA M + D + + +Y +L+ C N
Sbjct: 207 TMINILCKKGRVQEAKLIMSHIFRYDAY--PNAFTYTSLILGHCR------------NHN 252
Query: 129 KNVGFSGLVEMNK------TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
++ F+ M K + Y+ ++ G + + EEM ++G+ +++Y+I
Sbjct: 253 LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTI 312
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ +C +G +AV+L +MKK+G ++ + +I + + A+ +Y +M G
Sbjct: 313 PLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADG 372
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC---LEKPREIL 299
P+ VT N +I LC GR A+ + M G +P TY+ +C + ++ +
Sbjct: 373 LVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAM 432
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+FD+M+++G P + TY L+ + + G L + + M+ G PD + Y L+
Sbjct: 433 VIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGF 492
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
G L+ A M G+S P T ++ G
Sbjct: 493 SRGGKLEHATSLFYGMMEHGIS--PNHVTYTAIIDG 526
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 153/375 (40%), Gaps = 25/375 (6%)
Query: 32 DTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFK------RYVTAHLVNE 85
T+ ++I L + +F+++ L H+M + +P T+ + R+ TA + +
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKMLAD-GLVPTTVTYNALINQLCVEGRFETAFTIFK 401
Query: 86 AMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
M + L +E+ C + + VI + L G + NV Y
Sbjct: 402 WMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNV-----------ITY 450
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N ++ G+ K E M G+ D +Y+ + + GK A L+ M +
Sbjct: 451 NTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMME 510
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
GI + V Y +I VD A+ ++ +M E G PS T N +I + + E
Sbjct: 511 HGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISE 570
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCL-EKPREILG--LFDRMIESGIRPKMDTYVMLLR 322
A +M K+G +P+VITY F L R L +F M + P + TY L+
Sbjct: 571 AENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIY 630
Query: 323 KFGRWGFLR--PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ G ++ + ++ GC P+ Y LV L +G A + M KGL
Sbjct: 631 GLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGL 690
Query: 381 SAKPREELGTKLVQG 395
+P EE+ L+ G
Sbjct: 691 --QPSEEIYRALLIG 703
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/307 (20%), Positives = 122/307 (39%), Gaps = 29/307 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY ++ID + D + L +M ++ ++P+ T+ +M + + ++EA K
Sbjct: 519 TYTAIIDGYFNLAKVDDALALFWKMVES-GNLPSSQTYNVMISGFSKTNSISEAENFCGK 577
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + GL + ++Y + +D LC + F EM K + +
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCR------------NGRTGLAFKIFHEMEKRNYFPNLYT- 624
Query: 152 WFKMSWWGKCRE----------FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
+ +G C+E + G ++ +Y+ + +C G+ ++A +L
Sbjct: 625 -YSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVV 683
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
M+KKG++ Y ++ + V+ A+ ++ M +G Q + +I LC+
Sbjct: 684 SMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKEN 743
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYV 318
+ EA + M +K D + + L K E L L M TYV
Sbjct: 744 FIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYV 803
Query: 319 MLLRKFG 325
ML R+
Sbjct: 804 MLARELS 810
>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
Length = 381
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 150/339 (44%), Gaps = 21/339 (6%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PN T+ ++ V++A N L G K + V+Y ++ LC + ++A+EL
Sbjct: 14 PNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIERWVDAEEL 73
Query: 124 CFGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+V N N+I+ + K + E+M K G ++ +Y
Sbjct: 74 ---------LDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTY 124
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ + MC+ G A++L M+ G K D+V YNT+++ + ++ + A + +M +
Sbjct: 125 NAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQ 184
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---RE 297
C P VT NT+I LC+ G + +A+ V +MP+KGC P+ TY L K +
Sbjct: 185 NDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQ 244
Query: 298 ILGLFDRMIESGIRP-KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
L L + M G KM Y +L + + V V K+++ G SP +N ++
Sbjct: 245 ALELLNEMASKGYNTDKM--YQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVL 302
Query: 357 DALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
L G D A +M + G P E L++G
Sbjct: 303 LVLCRNGKTDYAIDVLADMVSYG--CMPDELTYIILIEG 339
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 113/267 (42%), Gaps = 38/267 (14%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
E + M G ++ +Y++ +D MC+ G +A +L + +G K + V YNTV++ +
Sbjct: 2 ELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGL 61
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
E A + EM C P+ T N ++ L G +++ L +M K GC +V
Sbjct: 62 CSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANV 121
Query: 283 ITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKF---GRW--------- 327
+TY+ + + + L L M G +P + TY LL+ +W
Sbjct: 122 VTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIK 181
Query: 328 -----------------------GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
G + F V+K+M E GC+P+ Y+ ++ L G
Sbjct: 182 MSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGK 241
Query: 365 LDMARKYDEEMFAKGLSAKPREELGTK 391
++ A + EM +KG + +L T+
Sbjct: 242 MEQALELLNEMASKGYNTDKMYQLLTE 268
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 3/166 (1%)
Query: 197 VKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKL 256
++L M+ +G + +VV YN +I A+ VD A + + GC+P+ V NTV+K
Sbjct: 1 MELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKG 60
Query: 257 LCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPK 313
LC R +A +L EM ++ C P+ T + L + +++ ++M + G
Sbjct: 61 LCSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTAN 120
Query: 314 MDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ TY ++ G + + M+ GC PD YN L+ L
Sbjct: 121 VVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGL 166
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 115/258 (44%), Gaps = 13/258 (5%)
Query: 28 THTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAM 87
T TYN+VI + + D + L+ M+ P+ T+ + K +A +A
Sbjct: 118 TANVVTYNAVISGMCEQGHVDSALELLSNMQSFGCK-PDIVTYNTLLKGLCSADQWEDAE 176
Query: 88 GTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYN 146
K+ + L D V++ ++ LC+ +++A E+ F + G + + Y+
Sbjct: 177 ELMIKMSQNDCLPDNVTFNTIISFLCQKGLILQAFEV-FKQMPEKGCNP-----NSTTYS 230
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
I+ G K + E EM +G D Y + + + K K + V++ +++
Sbjct: 231 TIIGGLAKAGKMEQALELLNEMASKGYNTD-KMYQLLTESLNKEDKIEEVVQVVHKLQDS 289
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
GI V +NTV+ + + D+A+ V +M GC P +T +I+ L G ++EA
Sbjct: 290 GISPQTVLFNTVLLVLCRNGKTDYAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEA 349
Query: 267 YAVLAEMPKKGCVPDVIT 284
+++ + C DV++
Sbjct: 350 RELVSRL----CSRDVLS 363
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 139/300 (46%), Gaps = 22/300 (7%)
Query: 90 FNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI---- 144
F+++ GL D V+Y L++ LC + EA+++ L EM ++
Sbjct: 387 FDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKV------------LQEMLARRLDVDE 434
Query: 145 --YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
Y +++ G+ K + + M +RGV ++ +Y+ D +CK G A +L E
Sbjct: 435 VTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHE 494
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M KG++++ YN++I + + +D AMR +M G +P V T T+I LC++G
Sbjct: 495 MSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGE 554
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVM 319
+ A+ +L EM G P ++TY+ + G L + M+E I P TY
Sbjct: 555 LDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNS 614
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L++++ ++ ++K M P+E YN L+ + A+ + EM KG
Sbjct: 615 LMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKG 674
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 149/326 (45%), Gaps = 10/326 (3%)
Query: 59 DNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHV 117
D +S P+ T+ I+ Y + A+ + + G++ + Y ++V LC+ V
Sbjct: 286 DEMASPPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRV 345
Query: 118 IEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
+A L E+ V +++ +Y +L G+ R +++EM ++G+ D
Sbjct: 346 SDA--LTVVEDM-VHHKVILD---EAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDG 399
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
+Y+ ++ +C++G+ +A K+ +EM + + +D V Y ++ + A +V+
Sbjct: 400 VTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNT 459
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP-- 295
M + G P+VVT + LC+ G V+ A +L EM KG + TY+ L K
Sbjct: 460 MVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGY 519
Query: 296 -REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
+ + M +G++P + TY L+ + G L + ++M + G P YN
Sbjct: 520 LDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNV 579
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGL 380
L++ G ++ +K E M K +
Sbjct: 580 LMNGFCMSGRVEGGKKLLEWMLEKNI 605
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 121/295 (41%), Gaps = 21/295 (7%)
Query: 90 FNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
++ ++G+ CN V + IE F GL + N YN++L
Sbjct: 223 LRRVRQYGISPSPEACNAVLSRLPLDEAIEL------------FQGLPDKNVCS-YNILL 269
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
+ R+ ++EM D+ +Y I + C G+ AVKL +M +G++
Sbjct: 270 KVLCGAGRVEDARQLFDEM---ASPPDVVTYGILIHGYCALGELENAVKLLDDMVARGVE 326
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
+ Y +V+ + V A+ V +M TV+ C G + A
Sbjct: 327 PNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRW 386
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMD----TYVMLLRKFG 325
EM +KG D +TY L + E L +++++ + ++D TY +L+ +
Sbjct: 387 FDEMQRKGLATDGVTYTTLINGLCRAGE-LKEAEKVLQEMLARRLDVDEVTYTVLVDGYC 445
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ G + F V M + G +P+ Y AL D L +G + A + EM KGL
Sbjct: 446 KRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGL 500
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 6/210 (2%)
Query: 175 KDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRV 234
K++ SY+I + ++C +G+ A +L+ EM DVV Y +I ++ A+++
Sbjct: 260 KNVCSYNILLKVLCGAGRVEDARQLFDEMASPP---DVVTYGILIHGYCALGELENAVKL 316
Query: 235 YREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
+M G +P+ +V+ LLC+ GRV +A V+ +M + D Y
Sbjct: 317 LDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCN 376
Query: 295 PREILGL---FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFA 351
+++ FD M G+ TY L+ R G L+ V ++M DE
Sbjct: 377 KGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVT 436
Query: 352 YNALVDALIDKGMLDMARKYDEEMFAKGLS 381
Y LVD +G + A + M +G++
Sbjct: 437 YTVLVDGYCKRGKMAEAFQVHNTMVQRGVA 466
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 127/282 (45%), Gaps = 11/282 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY ++ D L K + + L+H M + + N T+ + A +++AM T
Sbjct: 471 TYTALSDGLCKQGDVQAANELLHEMSNKGLEL-NACTYNSLINGLCKAGYLDQAMRTMAD 529
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+D GLK +V +Y L+DALC+ + A +L E + G + YN+++ G
Sbjct: 530 MDAAGLKPDVYTYTTLIDALCKSGELDRAHDL-LQEMLDNGIKPTI-----VTYNVLMNG 583
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ ++ E M ++ + + +Y+ M C ++YK M + ++ +
Sbjct: 584 FCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPN 643
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
YN +I+ + + A + EM E G + + + + +I+LL + + EA +
Sbjct: 644 ENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFH 703
Query: 272 EMPKKGCV--PDVITYHCFFRCLEKPRE-ILGLFDRMIESGI 310
+M K+G PDV ++ F E E L L D ++E+ I
Sbjct: 704 DMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVEASI 745
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 68/178 (38%), Gaps = 33/178 (18%)
Query: 234 VYREMREMGCQPSVVTCNTV---------------------------IKLLCENGRVREA 266
+ R +R+ G PS CN V +K+LC GRV +A
Sbjct: 222 LLRRVRQYGISPSPEACNAVLSRLPLDEAIELFQGLPDKNVCSYNILLKVLCGAGRVEDA 281
Query: 267 YAVLAEMPKKGCVPDVITYHCFFR---CLEKPREILGLFDRMIESGIRPKMDTYVMLLRK 323
+ EM PDV+TY L + + L D M+ G+ P Y ++
Sbjct: 282 RQLFDEMASP---PDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVAL 338
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G + V + M DE Y ++ +KG L AR++ +EM KGL+
Sbjct: 339 LCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLA 396
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 164/353 (46%), Gaps = 12/353 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN +I L + + + +++ M P+ T+ I+ + +AM +
Sbjct: 169 TYNPLIHTLCERGQVRDALSVLDDMLCR-GCAPDVVTYNILLEATCKGRGYRQAMELIDL 227
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G + V+Y L+D +C V +A EL +N+ G T YN +L+G
Sbjct: 228 MRAEGCTPNNVTYNVLMDGMCGEGDVDDALELL----RNLPSHGCKP--STVNYNTVLKG 281
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
WG E EM + + ++++ + +C+ G +A++L ++M K G +
Sbjct: 282 LCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTAN 341
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+V YN +I + VD AM + +M+ GC+P +VT NT++K LC + +A ++
Sbjct: 342 IVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMD 401
Query: 272 EMPKKGCVPDVITYHCF--FRCLEKPR-EILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M + GC+PD +T++ F C + + + +F +M + G P TY ++ +
Sbjct: 402 NMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKAT 461
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
L ++ +M G +PD+ Y L + L D ++ A + ++ G+S
Sbjct: 462 KLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGIS 513
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 109/238 (45%), Gaps = 6/238 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y + G+ + G R M V + ++Y+ + +C+ G+ A+ + +M
Sbjct: 138 YGALTDGYCRAGRLGDARRVVGGMP---VQPNAYTYNPLIHTLCERGQVRDALSVLDDML 194
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+G DVV YN ++ A G AM + MR GC P+ VT N ++ +C G V
Sbjct: 195 CRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVD 254
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLL 321
+A +L +P GC P + Y+ + L E+ + L M+ P T+ +++
Sbjct: 255 DALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVI 314
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
R G L+ + +KM + GC+ + YNA+++ L ++ +D A +M + G
Sbjct: 315 YSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYG 372
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 135/317 (42%), Gaps = 47/317 (14%)
Query: 6 CYANDWKRALEFF-NWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM-KDNPSS 63
C D ALE N C +T YN+V+ L + + L+ M ++N
Sbjct: 248 CGEGDVDDALELLRNLPSHGCK--PSTVNYNTVLKGLCSAERWGDADELVTEMLREN--C 303
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQE 122
PN ATF ++ L+ +A+ K+ + G + V+Y +++ LCE ++V A
Sbjct: 304 PPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMG 363
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L + K+ G + YN +L+G + W E + M + G + D +++
Sbjct: 364 L-LSKMKSYGCKPDI-----VTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNT 417
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM---- 238
+ +C+ G A++++K+M KG + + Y+T+I + + +D A+ ++ EM
Sbjct: 418 LIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKG 477
Query: 239 ------------------------------REMGCQPSVVTCNTVIKLLCENGRVREAYA 268
++ G P V N ++ LC NG+ A
Sbjct: 478 FNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAID 537
Query: 269 VLAEMPKKGCVPDVITY 285
++A M GC+PD +TY
Sbjct: 538 IMAYMVSSGCMPDDLTY 554
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 81/176 (46%), Gaps = 9/176 (5%)
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+C+ G+P A ++ + G VVAY + + + A RV + M QP+
Sbjct: 113 LCRRGRPDDAERV---VGACGPAATVVAYGALTDGYCRAGRLGDARRV---VGGMPVQPN 166
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFD 303
T N +I LCE G+VR+A +VL +M +GC PDV+TY+ K R+ + L D
Sbjct: 167 AYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELID 226
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
M G P TY +L+ G + + + + GC P YN ++ L
Sbjct: 227 LMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 282
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 115/252 (45%), Gaps = 13/252 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++I+ L + D + L+ +MK P+ T+ + K +A +A +
Sbjct: 344 TYNAIINGLCEQRNVDGAMGLLSKMKSY-GCKPDIVTYNTLLKGLCSAAQWVDAEELMDN 402
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + G L D V++ L+ LC+ +++A E+ F + + G + + Y+ I+ G
Sbjct: 403 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEV-FKQMPDKGCT-----PNSITYSTIISG 456
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + + E + EM +G D Y + + + +A++ ++++ GI
Sbjct: 457 LAKATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPH 515
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V YN ++ + + +FA+ + M GC P +T +I+ L G + EA +L
Sbjct: 516 TVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLI 575
Query: 272 EMPKKGCVPDVI 283
++ C DV+
Sbjct: 576 KL----CSRDVL 583
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 156/342 (45%), Gaps = 23/342 (6%)
Query: 56 RMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEY 114
R N +PN T+ M Y V +A+ + ++ GL + V++ L+D LC+
Sbjct: 252 RTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKT 311
Query: 115 KHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVV 174
++ A++ ++ G+V +YN ++ G+ K + E++K ++
Sbjct: 312 DEMVSARKFLI----DMASFGVVP--NIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEIL 365
Query: 175 KDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRV 234
D+ +YSI + +C + +A L +EMKKKG + V YNT+I ++ A+ V
Sbjct: 366 PDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEV 425
Query: 235 YREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
+M E G +P+++T +T+I C+ G++ A + EM KG +PDV+ Y K
Sbjct: 426 CSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFK 485
Query: 295 ---PREILGLFDRMIESGIRPKMDTYVML---LRKFGRWGFLRPVFVVWKKMEELG---- 344
+E L M E+G+ P + T L L K GR +F+ + G
Sbjct: 486 DGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTN 545
Query: 345 ------CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
CSP+ Y AL+ L G + A K+ +M GL
Sbjct: 546 ELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGL 587
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 170/383 (44%), Gaps = 25/383 (6%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C K+ALE + + D + T+ +ID L K E + + M + +P
Sbjct: 274 CKIAHVKKALELYXEMLGDGLLPNVV-TFGILIDGLCKTDEMVSARKFLIDMA-SFGVVP 331
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELC 124
N + + Y A ++EA+ +++++ L D +Y L+ LC + EA L
Sbjct: 332 NIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL- 390
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
E K GF + YN ++ G+ K K E +M ++G+ ++ ++S +
Sbjct: 391 LQEMKKKGF-----LPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLI 445
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D CK+GK A+ LY EM KG+ DVVAY +I A R+++EM+E G
Sbjct: 446 DGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLH 505
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLA-------------EMPKKGCVPDVITYHCFFRC 291
P+V T + +I LC++GR+ +A + E+ + C P+ + Y +
Sbjct: 506 PNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQG 565
Query: 292 LEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
L I F M SG+RP + T +++++ R LR V ++ + ++G P+
Sbjct: 566 LCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPN 625
Query: 349 EFAYNALVDALIDKGMLDMARKY 371
Y L + G L A +
Sbjct: 626 SSVYRVLAKGYEESGYLKSALSF 648
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 128/285 (44%), Gaps = 15/285 (5%)
Query: 102 VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVE---MNKTKIYNMILRGWFKMSWW 158
V+Y L+D C ++A L F ++E IY +++RG S
Sbjct: 194 VTYGTLIDGCCRQGDFLKAFRL---------FDEMIEKKIFPTVVIYTILIRGLCGESRI 244
Query: 159 GKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTV 218
+ + M G++ +L++Y+ MD CK KA++LY EM G+ +VV + +
Sbjct: 245 SEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGIL 304
Query: 219 IRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGC 278
I + ++ + A + +M G P++ N +I C+ G + EA ++ +E+ K
Sbjct: 305 IDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEI 364
Query: 279 VPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFV 335
+PDV TY + L ++ E GL M + G P TY L+ + + G +
Sbjct: 365 LPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIE 424
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
V +M E G P+ ++ L+D G ++ A EM KGL
Sbjct: 425 VCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 112/238 (47%), Gaps = 5/238 (2%)
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
NM+L G K + + + +M RG ++ +Y +D C+ G KA +L+ EM +
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
K I VV Y +IR + + A ++R MR G P++ T NT++ C+ V++
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG----LFDRMIESGIRPKMDTYVMLL 321
A + EM G +P+V+T+ L K E++ L D M G+ P + Y L+
Sbjct: 282 ALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLID-MASFGVVPNIFVYNCLI 340
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ + G L + ++E+ PD F Y+ L+ L ++ A +EM KG
Sbjct: 341 DGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 7/211 (3%)
Query: 170 KRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVD 229
K V+ + + ++ +D + K G+ K+Y +M +G +VV Y T+I G D
Sbjct: 151 KMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLID--GCCRQGD 208
Query: 230 F--AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
F A R++ EM E P+VV +I+ LC R+ EA ++ M G +P++ TY+
Sbjct: 209 FLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNT 268
Query: 288 FFR--C-LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
C + ++ L L+ M+ G+ P + T+ +L+ + + M G
Sbjct: 269 MMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFG 328
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
P+ F YN L+D G L A E+
Sbjct: 329 VVPNIFVYNCLIDGYCKAGNLSEALSLHSEI 359
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 7/179 (3%)
Query: 209 KMDVV----AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
KMDV+ A N V+ + D +VY +M G P+VVT T+I C G
Sbjct: 151 KMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLL 321
+A+ + EM +K P V+ Y R L + E +F M SG+ P + TY ++
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + ++ ++ +M G P+ + L+D L + ARK+ +M + G+
Sbjct: 271 DGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGV 329
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 139/303 (45%), Gaps = 10/303 (3%)
Query: 83 VNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
V+EA+G KL FG + D VSY ++ LC K + +EL E V + +
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEEL-MDEMVRVDCAPNIVTFN 255
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
T I + G F+ + E +M + G D+ Y+ +D +CK G A ++
Sbjct: 256 TLIGYLCRNGLFE-----RVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILN 310
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
M G+K +VV YNTV++ + +E A + EM + C VT N ++ C+NG
Sbjct: 311 RMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNG 370
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYV 318
V +L +M GC+PDVITY K E + L M G +P +Y
Sbjct: 371 LVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYT 430
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
++L+ G + +M + GC P+ +N L++ L KG+++ A + ++M
Sbjct: 431 IVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN 490
Query: 379 GLS 381
G S
Sbjct: 491 GCS 493
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 140/311 (45%), Gaps = 20/311 (6%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQEL 123
PN TF + L ++ E G ++ Y ++D +C+ H+ A E+
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308
Query: 124 -----CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
+G NV YN +L+G W + E EM ++ D
Sbjct: 309 LNRMPSYGLKPNV-----------VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV 357
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+++I +D C++G + ++L ++M G DV+ Y TVI +D A+ + + M
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP--- 295
GC+P+ V+ V+K LC GR +A ++++M ++GC P+ +T++ L K
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
+ + L +M+ +G P + +Y ++ G+ G + M G SP+ Y+++
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537
Query: 356 VDALIDKGMLD 366
AL +G ++
Sbjct: 538 ACALSREGRVN 548
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 136/292 (46%), Gaps = 10/292 (3%)
Query: 97 GLKDEVSYCNLV-DALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKM 155
G + CNLV +A+CE V EA G + + F G E + YN +L+G
Sbjct: 176 GCTLDTGNCNLVLNAICEQGCVDEA----VGLLRKLAFFG-CEADIVS-YNAVLKGLCMA 229
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
WG E +EM + ++ +++ + +C++G + ++ +M + G D+ Y
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
T+I + ++ A + M G +P+VV NTV+K LC R +EA +L+EM +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349
Query: 276 KGCVPDVITYHCF--FRCLEKPRE-ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
K C D +T++ F C + ++ L ++M+ G P + TY ++ F + G +
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
++ K M GC P+ +Y ++ L G A + +M +G P
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 175/422 (41%), Gaps = 65/422 (15%)
Query: 6 CYANDWKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C A W E + V DC T+N++I L + F+ ++ +M ++ +
Sbjct: 227 CMAKRWGDVEELMDEMVRVDC--APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCT- 283
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ + + + A N++ +GLK + V Y ++ LC + EA+EL
Sbjct: 284 PDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEEL 343
Query: 124 CFGENKNVGFSGLVEMNKTK------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
L EM + +N+++ + + + E E+M G + D+
Sbjct: 344 ------------LSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV 391
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG--VDFAMRVY 235
+Y+ ++ CK G +AV L K M G K + V+Y V++ + S G VD A +
Sbjct: 392 ITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL-CSAGRWVD-AEELM 449
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP 295
+M + GC P+ VT NT+I LC+ G V +A +L +M GC PD+I+Y L K
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509
Query: 296 ---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL--------- 343
E L L + M+ GI P Y + R G + V ++ +++
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569
Query: 344 --------------------------GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
GC P+E Y L+ L +G+ A++ E+ +
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCS 629
Query: 378 KG 379
+G
Sbjct: 630 RG 631
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 131/283 (46%), Gaps = 23/283 (8%)
Query: 107 LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE 166
+V LC + +A E+ + F G + +Y++IL + + E
Sbjct: 117 VVRGLCTRGRIADALEVL----DEMSFKGCAPI--PPMYHVILEAACRSGGFRNSVRVLE 170
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
M +G D + ++ ++ +C+ G +AV L +++ G + D+V+YN V++ + +++
Sbjct: 171 AMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAK 230
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
+ EM + C P++VT NT+I LC NG + VLA+M + GC PD+ Y
Sbjct: 231 RWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYA 290
Query: 287 CFFR--CLEKPREILG-LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
C E E+ + +RM G++P + Y +L+ G R WK+ EEL
Sbjct: 291 TIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLK--GLCSAER-----WKEAEEL 343
Query: 344 -------GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
C D+ +N LVD G++D + E+M + G
Sbjct: 344 LSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 3/118 (2%)
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGL 301
P+ T V++ LC GR+ +A VL EM KGC P YH + R + +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ M G ++L G + + +K+ GC D +YNA++ L
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 165/376 (43%), Gaps = 22/376 (5%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNL---IHRMKDNPSSIPNHATFRIMFKRYVTAHLV 83
F T+T N ++ +L + + +W ++RM+ N TF IM +
Sbjct: 187 FDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKS----NVYTFNIMINVLCKEGKL 242
Query: 84 NEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKT 142
+A G ++ FG+K V+Y LV + IE + E K+ GF
Sbjct: 243 KKAKGFLGIMESFGIKPTIVTYNTLVQGY-SLRGRIEGARMIISEMKSKGFQP-----DL 296
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
+ YN IL W M G+ E EM G+V D SY+I + +G A E
Sbjct: 297 QTYNPIL-SW--MCNEGRASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDE 353
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M K+G+ YNT+I + + ++ A + RE+RE G VT N VI C++G
Sbjct: 354 MVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGD 413
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVM 319
++A+A+ EM G P TY L K RE LF++++ G++P +
Sbjct: 414 AKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNT 473
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L+ G + F + K+M+ + PD+ YN L+ L +G + AR+ EM +G
Sbjct: 474 LMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRG 533
Query: 380 LSAKPREELGTKLVQG 395
+ KP L+ G
Sbjct: 534 I--KPDHISYNTLISG 547
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 145/328 (44%), Gaps = 26/328 (7%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGEN 128
+ R +F V AH D K + + +V C+ + V EA E CF
Sbjct: 136 SVRDLFDELVLAH------------DRLQTKSTILFDFMVRFYCQLRMVDEAIE-CFYLM 182
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
K GF KT+ N IL +++ F+ +M + + ++++++I ++++C
Sbjct: 183 KEKGFDP-----KTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLC 237
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
K GK KA M+ GIK +V YNT+++ + ++ A + EM+ G QP +
Sbjct: 238 KEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQ 297
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLF---DRM 305
T N ++ +C GR E VL EM G VPD ++Y+ R ++ F D M
Sbjct: 298 TYNPILSWMCNEGRASE---VLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEM 354
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
++ G+ P TY L+ + ++ +++ E G D YN +++ G
Sbjct: 355 VKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDA 414
Query: 366 DMARKYDEEMFAKGLSAKPREELGTKLV 393
A +EM G+ KP + T L+
Sbjct: 415 KKAFALHDEMMTDGI--KPTQFTYTSLI 440
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 117/242 (48%), Gaps = 9/242 (3%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G F + E+ ++G+V D +Y+I ++ C+ G KA L+ EM
Sbjct: 366 YNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMM 425
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
GIK Y ++I + A ++ ++ G +P +V NT++ C G +
Sbjct: 426 TDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMD 485
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL------EKPREILGLFDRMIESGIRPKMDTYV 318
A+++L EM + PD +TY+C R L E+ RE++G M GI+P +Y
Sbjct: 486 RAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMG---EMKRRGIKPDHISYN 542
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
L+ + + G + F+V +M LG +P YNAL+ L ++A + EM ++
Sbjct: 543 TLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSE 602
Query: 379 GL 380
G+
Sbjct: 603 GI 604
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 127/274 (46%), Gaps = 13/274 (4%)
Query: 96 FGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK-------IYNMI 148
F +DE+ +V Y +I F ENK L+ + K YN++
Sbjct: 348 FAYRDEMVKQGMVPTFYTYNTLIHG---LFMENKIEAAEILIREIREKGIVLDSVTYNIV 404
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G+ + K +EM G+ +Y+ + ++C+ K +A +L++++ KG+
Sbjct: 405 INGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGM 464
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
K D+V NT++ + +D A + +EM M P VT N +++ LC G+ EA
Sbjct: 465 KPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARE 524
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREILGLF---DRMIESGIRPKMDTYVMLLRKFG 325
++ EM ++G PD I+Y+ K + F D M+ G P + TY LL+
Sbjct: 525 LMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLS 584
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ + ++M+ G P++ ++ ++++A+
Sbjct: 585 KNQDGELAEELLREMKSEGIVPNDSSFCSVIEAM 618
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 120/264 (45%), Gaps = 10/264 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++I L + + + LI +++ + + T+ I+ Y +A ++
Sbjct: 365 TYNTLIHGLFMENKIEAAEILIREIREK-GIVLDSVTYNIVINGYCQHGDAKKAFALHDE 423
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGF-SGLVEMNKTKIYNMILR 150
+ G+K + +Y +L+ LC EA EL F + G LV MN ++
Sbjct: 424 MMTDGIKPTQFTYTSLIYVLCRRNKTREADEL-FEKVVGKGMKPDLVMMNT------LMD 476
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
G + +EMD+ + D +Y+ M +C GK +A +L EMK++GIK
Sbjct: 477 GHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKP 536
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
D ++YNT+I A V EM +G P+++T N ++K L +N A +L
Sbjct: 537 DHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELL 596
Query: 271 AEMPKKGCVPDVITYHCFFRCLEK 294
EM +G VP+ ++ + K
Sbjct: 597 REMKSEGIVPNDSSFCSVIEAMSK 620
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 174/396 (43%), Gaps = 29/396 (7%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
KR +F + + + F +T ++ +++ LGKF DL+ ++ +M N P+ TF
Sbjct: 148 KRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKML-NSGIRPSLLTFN 206
Query: 72 IMFKRYVTAHLVNEA---MGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGEN 128
M V EA M + D + + +Y +L+ C N
Sbjct: 207 TMINILCKKGRVQEAKLIMSHIFRYDAY--PNAFTYTSLILGHCR------------NHN 252
Query: 129 KNVGFSGLVEMNK------TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
++ F+ M K + Y+ ++ G + + EEM ++G+ +++Y+I
Sbjct: 253 LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTI 312
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ +C +G +AV+L +MKK+G ++ + +I + + A+ +Y +M G
Sbjct: 313 PLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADG 372
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC---LEKPREIL 299
P+ VT N +I LC GR A+ + M G +P TY+ +C + ++ +
Sbjct: 373 LVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAM 432
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+FD+M+++G P + TY L+ + + G L + + M+ G PD + Y L+
Sbjct: 433 VIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGF 492
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
G L+ A M G+S P T ++ G
Sbjct: 493 SRGGKLEHATSLFYGMMEHGIS--PNHVTYTAIIDG 526
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 153/375 (40%), Gaps = 25/375 (6%)
Query: 32 DTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFK------RYVTAHLVNE 85
T+ ++I L + +F+++ L H+M + +P T+ + R+ TA + +
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKMLAD-GLVPTTVTYNALINQLCVEGRFETAFTIFK 401
Query: 86 AMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
M + L +E+ C + + VI + L G + NV Y
Sbjct: 402 WMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNV-----------ITY 450
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N ++ G+ K E M G+ D +Y+ + + GK A L+ M +
Sbjct: 451 NTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMME 510
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
GI + V Y +I VD A+ ++ +M E G PS T N +I + + E
Sbjct: 511 HGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISE 570
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCL-EKPREILG--LFDRMIESGIRPKMDTYVMLLR 322
A +M K+G +P+VITY F L R L +F M + P + TY L+
Sbjct: 571 AENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIY 630
Query: 323 KFGRWGFLR--PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ G ++ + ++ GC P+ Y LV L +G A + M KGL
Sbjct: 631 GLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGL 690
Query: 381 SAKPREELGTKLVQG 395
+P EE+ L+ G
Sbjct: 691 --QPSEEIYRALLIG 703
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/307 (20%), Positives = 122/307 (39%), Gaps = 29/307 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY ++ID + D + L +M ++ ++P+ T+ +M + + ++EA K
Sbjct: 519 TYTAIIDGYFNLAKVDDALALFWKMVES-GNLPSSQTYNVMISGFSKTNSISEAENFCGK 577
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + GL + ++Y + +D LC + F EM K + +
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCR------------NGRTGLAFKIFHEMEKRNYFPNLYT- 624
Query: 152 WFKMSWWGKCRE----------FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
+ +G C+E + G ++ +Y+ + +C G+ ++A +L
Sbjct: 625 -YSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVV 683
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
M+KKG++ Y ++ + V+ A+ ++ M +G Q + +I LC+
Sbjct: 684 SMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKEN 743
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYV 318
+ EA + M +K D + + L K E L L M TYV
Sbjct: 744 FIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYV 803
Query: 319 MLLRKFG 325
ML R+
Sbjct: 804 MLARELS 810
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 159/361 (44%), Gaps = 45/361 (12%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA--- 120
P+ TF + V EA+ +++ E GL+ D+++Y VD +C+ + A
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239
Query: 121 ----QELCFGENKNVGFSGLV-----------------EMNKTKI------YNMILRGWF 153
+E+ + V +S ++ EM I YN ++ G+
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
W + +EM +R + ++ +Y+ ++ K GK ++A +LY EM +GI + +
Sbjct: 300 ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 359
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
YN++I + +D A ++ M GC P V T T+I C R+ + +L EM
Sbjct: 360 TYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 419
Query: 274 PKKGCVPDVITYHCFFR--CLEKP-REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
P++G V + +TY+ CL L L +MI SG+ P + T LL G L
Sbjct: 420 PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKL 479
Query: 331 RPVFVVWKKMEEL-----------GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ ++K M++ G PD YN L+ LI++G A + EEM +G
Sbjct: 480 KDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRG 539
Query: 380 L 380
+
Sbjct: 540 I 540
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 167/392 (42%), Gaps = 22/392 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C D AL +E H Y+++ID L K S NL M+D P
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDK-GIFP 286
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N T+ M + + + A ++ E + + V+Y L++A + EA EL
Sbjct: 287 NIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAEL- 345
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+ E G + T YN ++ G+ K + + M +G D+ +++ +
Sbjct: 346 YDEMLPRGI-----IPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLI 400
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D C + + ++L EM ++G+ + V YNT+I + ++ A+ + ++M G
Sbjct: 401 DGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVC 460
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEM-----------PKKGCVPDVITYHCFFRCLE 293
P +VTCNT++ LC+NG++++A + M P G PDV+TY+ L
Sbjct: 461 PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLI 520
Query: 294 KPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF 350
+ L L++ M GI P TY ++ + L ++ M SP+
Sbjct: 521 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVV 580
Query: 351 AYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+N L++ G +D + EM +G+ A
Sbjct: 581 TFNTLINGYCKAGRVDDGLELFCEMGRRGIVA 612
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 145/320 (45%), Gaps = 15/320 (4%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGE 127
+F I+ K + + + A+ TF KL + GL D V++ L+ LC V EA +L
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDL---- 173
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
F + + + ++ G + + + M + G+ D +Y ++D M
Sbjct: 174 -----FHQICRPD-VLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227
Query: 188 CKSGKPWKAVKLYKEMKK-KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
CK G A+ L ++M++ IK +VV Y+ +I + + ++ EM++ G P+
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPN 287
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFD 303
+VT N +I C +GR A +L EM ++ P+V+TY+ K E L+D
Sbjct: 288 IVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYD 347
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
M+ GI P TY ++ F + L ++ M GCSPD F + L+D
Sbjct: 348 EMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAK 407
Query: 364 MLDMARKYDEEMFAKGLSAK 383
+D + EM +GL A
Sbjct: 408 RIDDGMELLHEMPRRGLVAN 427
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 138/309 (44%), Gaps = 22/309 (7%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T TYNS+ID K D + ++ + M S P+ TF + Y A +++ M
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCS-PDVFTFTTLIDGYCGAKRIDDGMELL 416
Query: 91 NKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+++ GL + V+Y L+ C + A +L ++ + SG+ T N +L
Sbjct: 417 HEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDL----SQQMISSGVCPDIVT--CNTLL 470
Query: 150 RGWFKMSWWGKCREFWEEMDK-----------RGVVKDLHSYSIYMDIMCKSGKPWKAVK 198
G E ++ M K GV D+ +Y+I + + GK +A +
Sbjct: 471 DGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEE 530
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
LY+EM +GI D + Y+++I + +D A +++ M P+VVT NT+I C
Sbjct: 531 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYC 590
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMD 315
+ GRV + + EM ++G V D I Y FR + L +F MI SG+ P
Sbjct: 591 KAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTI 650
Query: 316 TYVMLLRKF 324
T +L F
Sbjct: 651 TIRNMLTGF 659
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 124/260 (47%), Gaps = 18/260 (6%)
Query: 126 GENKNVGFSGLVEMNKTKIYNMILR-GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
GE+ GF G ++ LR G +++ + + +M + + + ++ M
Sbjct: 38 GESGEAGFRG---------ESLKLRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLM 88
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ + +P + LY++M++K I+ D+ ++ +I+ + FA+ + ++ ++G
Sbjct: 89 GAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLH 148
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGL 301
P VVT T++ LC + RV EA + ++ C PDV+T+ C E + E + L
Sbjct: 149 PDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVAL 204
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG-CSPDEFAYNALVDALI 360
DRM+E+G++P TY + + G + +KMEE+ P+ Y+A++D L
Sbjct: 205 LDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLC 264
Query: 361 DKGMLDMARKYDEEMFAKGL 380
G + EM KG+
Sbjct: 265 KDGRHSDSHNLFIEMQDKGI 284
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 116/286 (40%), Gaps = 46/286 (16%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+ ++ID D L+H M + N T+ + + +N A+ +
Sbjct: 395 TFTTLIDGYCGAKRIDDGMELLHEMPRR-GLVANTVTYNTLIHGFCLVGDLNAALDLSQQ 453
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNV-------GFSGLVEMNKTKI 144
+ G+ ++ CN L+D LC+ + +A E+ K+ F+G VE +
Sbjct: 454 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNG-VEPD-VLT 511
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK--------------- 189
YN+++ G + + E +EEM RG+V D +YS +D +CK
Sbjct: 512 YNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMG 571
Query: 190 --------------------SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVD 229
+G+ ++L+ EM ++GI D + Y T+I ++
Sbjct: 572 SKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNIN 631
Query: 230 FAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
A+ +++EM G P +T ++ + A A+L ++ +
Sbjct: 632 GALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQR 677
>gi|125526118|gb|EAY74232.1| hypothetical protein OsI_02112 [Oryza sativa Indica Group]
Length = 556
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 159/357 (44%), Gaps = 19/357 (5%)
Query: 36 SVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL-- 93
+ + +L F +W L+ P P A F + +RY A+ F L
Sbjct: 75 TAVSLLASRGLFAAAWRLLLAPSPTP---PPLAAFAPLVRRYARLGRAPAALRAFQFLRR 131
Query: 94 --DEF----GLKDEVSYCNL-VDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYN 146
D + + S N+ VDALC+ H A EL + S E + YN
Sbjct: 132 HPDRYMAGGDIPAAASLLNMAVDALCKEGHPRAAVELFERWRREEPDSPPDE----RAYN 187
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++L GW + K + W EM GV + +Y ++ +C +P +A+ L EM+++
Sbjct: 188 ILLHGWSRAGRLDKVGKLWAEMRLAGVRPTVVTYGTLIEGLCVKRRPDQAIALLDEMREE 247
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
GI+ +++ N ++ A+ + A +V + G P++ T N+++ C++G + A
Sbjct: 248 GIEANLLTCNPIVYALAQAGRFQDAHKVLEKFPLYGVAPNISTFNSLVMGYCKHGDLAGA 307
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRK 323
+VL M ++G P TY+ FF K ++ + + +MI +G P TYV+L++
Sbjct: 308 SSVLKVMTERGISPTTRTYNYFFMTFAKNSDVESGMNFYSKMIGNGYSPDQLTYVLLVKM 367
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
R L V + ++M G PD L+ L + + A E+MF +G+
Sbjct: 368 LSRANRLELVVQMIQEMRTHGFEPDLATSTMLIHLLCRRHQFEEACAEFEDMFKRGI 424
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 108/249 (43%), Gaps = 22/249 (8%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQEL 123
P T+ + + ++A+ +++ E G++ + CN +V AL + +A ++
Sbjct: 216 PTVVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEANLLTCNPIVYALAQAGRFQDAHKV 275
Query: 124 C-----FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
+G N+ +N ++ G+ K + M +RG+
Sbjct: 276 LEKFPLYGVAPNIS-----------TFNSLVMGYCKHGDLAGASSVLKVMTERGISPTTR 324
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+Y+ + K+ + Y +M G D + Y +++ + + ++ +++ +EM
Sbjct: 325 TYNYFFMTFAKNSDVESGMNFYSKMIGNGYSPDQLTYVLLVKMLSRANRLELVVQMIQEM 384
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI 298
R G +P + T +I LLC + EA A +M K+G VP ITY R L++
Sbjct: 385 RTHGFEPDLATSTMLIHLLCRRHQFEEACAEFEDMFKRGIVPQYITYQKLMRELKR---- 440
Query: 299 LGLFDRMIE 307
LGL R+I+
Sbjct: 441 LGLV-RLIQ 448
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 77/208 (37%), Gaps = 36/208 (17%)
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
++ +D +CK G P AV+L++ +++ E
Sbjct: 150 NMAVDALCKEGHPRAAVELFERWRRE---------------------------------E 176
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPRE 297
P N ++ GR+ + + AEM G P V+TY L +P +
Sbjct: 177 PDSPPDERAYNILLHGWSRAGRLDKVGKLWAEMRLAGVRPTVVTYGTLIEGLCVKRRPDQ 236
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ L D M E GI + T ++ + G + V +K G +P+ +N+LV
Sbjct: 237 AIALLDEMREEGIEANLLTCNPIVYALAQAGRFQDAHKVLEKFPLYGVAPNISTFNSLVM 296
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPR 385
G L A + M +G+S R
Sbjct: 297 GYCKHGDLAGASSVLKVMTERGISPTTR 324
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 141/306 (46%), Gaps = 16/306 (5%)
Query: 83 VNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
V+EA+G KL FG + D VSY ++ LC K + +EL E V + +
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEEL-MDEMVRVDCAPNIVTFN 255
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
T I + G F+ + E +M + G D+ Y+ +D +CK G A ++
Sbjct: 256 TLIGYLCRNGLFE-----RVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILN 310
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
M G+K +VV YNTV++ + +E A + EM + C VT N ++ C+NG
Sbjct: 311 RMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNG 370
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYV 318
V +L +M GC+PDVITY K E + L M G +P +Y
Sbjct: 371 LVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYT 430
Query: 319 MLLRKF---GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
++L+ GRW + +M + GC P+ +N L++ L KG+++ A + ++M
Sbjct: 431 IVLKGLCSAGRWVDAEELM---SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQM 487
Query: 376 FAKGLS 381
G S
Sbjct: 488 LVNGCS 493
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 140/311 (45%), Gaps = 20/311 (6%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQEL 123
PN TF + L ++ E G ++ Y ++D +C+ H+ A E+
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308
Query: 124 -----CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
+G NV YN +L+G W + E EM ++ D
Sbjct: 309 LNRMPSYGLKPNV-----------VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV 357
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+++I +D C++G + ++L ++M G DV+ Y TVI +D A+ + + M
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP--- 295
GC+P+ V+ V+K LC GR +A ++++M ++GC P+ +T++ L K
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
+ + L +M+ +G P + +Y ++ G+ G + M G SP+ Y+++
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537
Query: 356 VDALIDKGMLD 366
AL +G ++
Sbjct: 538 ACALSREGRVN 548
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 136/292 (46%), Gaps = 10/292 (3%)
Query: 97 GLKDEVSYCNLV-DALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKM 155
G + CNLV +A+CE V EA G + + F G E + YN +L+G
Sbjct: 176 GCTLDTGNCNLVLNAICEQGCVDEA----VGLLRKLAFFG-CEADIVS-YNAVLKGLCMA 229
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
WG E +EM + ++ +++ + +C++G + ++ +M + G D+ Y
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
T+I + ++ A + M G +P+VV NTV+K LC R +EA +L+EM +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349
Query: 276 KGCVPDVITYHCF--FRCLEKPRE-ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
K C D +T++ F C + ++ L ++M+ G P + TY ++ F + G +
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
++ K M GC P+ +Y ++ L G A + +M +G P
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 175/422 (41%), Gaps = 65/422 (15%)
Query: 6 CYANDWKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C A W E + V DC T+N++I L + F+ ++ +M ++ +
Sbjct: 227 CMAKRWGDVEELMDEMVRVDC--APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCT- 283
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ + + + A N++ +GLK + V Y ++ LC + EA+EL
Sbjct: 284 PDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEEL 343
Query: 124 CFGENKNVGFSGLVEMNKTK------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
L EM + +N+++ + + + E E+M G + D+
Sbjct: 344 ------------LSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV 391
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG--VDFAMRVY 235
+Y+ ++ CK G +AV L K M G K + V+Y V++ + S G VD A +
Sbjct: 392 ITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL-CSAGRWVD-AEELM 449
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP 295
+M + GC P+ VT NT+I LC+ G V +A +L +M GC PD+I+Y L K
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509
Query: 296 ---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL--------- 343
E L L + M+ GI P Y + R G + V ++ +++
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569
Query: 344 --------------------------GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
GC P+E Y L+ L +G+ A++ E+ +
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCS 629
Query: 378 KG 379
+G
Sbjct: 630 RG 631
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 131/283 (46%), Gaps = 23/283 (8%)
Query: 107 LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE 166
+V LC + +A E+ + F G + +Y++IL + + E
Sbjct: 117 VVRGLCTRGRIADALEVL----DEMSFKGCAPI--PPMYHVILEAACRSGGFRNSVRVLE 170
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
M +G D + ++ ++ +C+ G +AV L +++ G + D+V+YN V++ + +++
Sbjct: 171 AMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAK 230
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
+ EM + C P++VT NT+I LC NG + VLA+M + GC PD+ Y
Sbjct: 231 RWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYA 290
Query: 287 CFFR--CLEKPREILG-LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
C E E+ + +RM G++P + Y +L+ G R WK+ EEL
Sbjct: 291 TIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLK--GLCSAER-----WKEAEEL 343
Query: 344 -------GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
C D+ +N LVD G++D + E+M + G
Sbjct: 344 LSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 3/118 (2%)
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGL 301
P+ T V++ LC GR+ +A VL EM KGC P YH + R + +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ M G ++L G + + +K+ GC D +YNA++ L
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 175/421 (41%), Gaps = 61/421 (14%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A RALE + T YN+VI + +++ M++ P
Sbjct: 499 CSAGKPARALELLRQMPRPNAVT-----YNTVIAGFCSRGRVQAALDIMREMRERGGIAP 553
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV------------SYCN------- 106
N T+ + + V+EA+ F DE K EV YC+
Sbjct: 554 NQYTYGTVISGWCKVGRVDEAVKVF---DEMLTKGEVKPEAVMYNALIGGYCDQGKLDTA 610
Query: 107 ---------------------LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
LV AL EA EL + +G GL Y
Sbjct: 611 LLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV----EEMGGKGLAP--DVFTY 664
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N+++ G K K E +E M +RGV + +Y+ + + K G+ + KL+ E +
Sbjct: 665 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 724
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+GI+ D+V YN +I + S +D A + EM + P VT NT+++ LC GRV E
Sbjct: 725 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 784
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLE---KPREILGLFDRMIESGIRPKMDTYVMLLR 322
A ++ EM ++G PD++TY+ ++ L + + M+ G P + TY L++
Sbjct: 785 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 844
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ G + K+M E G +PD+ Y +L++ L + R D+E A +A
Sbjct: 845 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTED----ERAIDDERLAAADAA 900
Query: 383 K 383
K
Sbjct: 901 K 901
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 9/209 (4%)
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+++I + +C +GKP +A++L ++M + + V YNTVI V A+ + REM
Sbjct: 490 TFNIMLRHLCSAGKPARALELLRQMPRP----NAVTYNTVIAGFCSRGRVQAALDIMREM 545
Query: 239 REM-GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV-PDVITYHCFFR--CLEK 294
RE G P+ T TVI C+ GRV EA V EM KG V P+ + Y+ C +
Sbjct: 546 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 605
Query: 295 PREILGLF-DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
+ L+ DRM+E G+ + TY +L+ G + + ++M G +PD F YN
Sbjct: 606 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 665
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGLSA 382
L++ +G + A + E M +G+ A
Sbjct: 666 ILINGHCKEGNVKKALEIFENMSRRGVRA 694
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 9/191 (4%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A L+ +M + + + +N ++R + + A+ + R+M +P+ VT NTVI
Sbjct: 472 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIA 527
Query: 256 LLCENGRVREAYAVLAEMPKKGCV-PDVITYHCFFRC---LEKPREILGLFDRMIESG-I 310
C GRV+ A ++ EM ++G + P+ TY + + E + +FD M+ G +
Sbjct: 528 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 587
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
+P+ Y L+ + G L + +M E G + YN LV AL G A +
Sbjct: 588 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 647
Query: 371 YDEEMFAKGLS 381
EEM KGL+
Sbjct: 648 LVEEMGGKGLA 658
>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
Length = 668
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 147/355 (41%), Gaps = 44/355 (12%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQEL 123
P+ F + + A L + A+ GL + L+ AL V EA+ L
Sbjct: 226 PDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEAL 285
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+G ++ +T+ YN +L+G+ ++ + +EM + GV D +YS+
Sbjct: 286 FL----EFFLAGEIK-PRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLL 340
Query: 184 MDIMCKSG-----------------KP-----------------W-KAVKLYKEMKKKGI 208
+D ++G KP W KA + +EM+ G+
Sbjct: 341 VDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGV 400
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ D YN +I G + AM + +MRE G +P VVT NT+I C+ GR A
Sbjct: 401 RPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAE 460
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPRE---ILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ EM + C P TY+ L + + + M E G+ P + TY L+ +G
Sbjct: 461 LFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYG 520
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
R G + + M+ G P Y+ALV+A +G+ D A + M A GL
Sbjct: 521 RSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGL 575
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 127/263 (48%), Gaps = 16/263 (6%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ + +M + + + AM FNK+ E G++ D V++ L+DA C+ A EL
Sbjct: 402 PDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAEL 461
Query: 124 CFGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
F + E N T YN+++ + W EM ++G+V ++ +Y
Sbjct: 462 ---------FEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITY 512
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ +D+ +SG+ +A+ + MK G+K Y+ ++ A D A+ V + M+
Sbjct: 513 TTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKA 572
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPRE 297
G + S++ N++I E+ RV EA++VL M + G PDVITY + L E+ +
Sbjct: 573 DGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDK 632
Query: 298 ILGLFDRMIESGIRPKMDTYVML 320
+ +++ MI SG P ML
Sbjct: 633 VPVIYEEMITSGCAPDRKARAML 655
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 10/298 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
P + + K YV + A +++ + G+ DE +Y LVDA E+ +
Sbjct: 297 PRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGR-WESARI 355
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
E + G + +++ IL G+ W K EM GV D H Y++
Sbjct: 356 LLKEMEADGVK-----PSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVM 410
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D K A+ + +M+++GI+ DVV +NT+I A D A ++ EMRE C
Sbjct: 411 IDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNC 470
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILG 300
P T N +I LL E A+L+EM ++G VP++ITY + +E +
Sbjct: 471 PPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAID 530
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+ M G++P Y L+ + + G V K M+ G N+L++A
Sbjct: 531 CIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINA 588
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 94/225 (41%), Gaps = 36/225 (16%)
Query: 174 VKDLHSYSIYMDIMCKSGKPWKAV---KLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF 230
+ DL SYS + + + P A +L ++++ ++ D ++ +I A + D
Sbjct: 187 LPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLISAFARAALPDA 246
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR 290
A+ + + +G P +I L GRV EA A+ E FF
Sbjct: 247 ALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLE---------------FFL 291
Query: 291 CLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF 350
E I+P+ Y LL+ + R G L+ V +M + G +PDE
Sbjct: 292 AGE----------------IKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEA 335
Query: 351 AYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
Y+ LVDA G + AR +EM A G+ KP + ++++ G
Sbjct: 336 TYSLLVDAYTRAGRWESARILLKEMEADGV--KPSSYVFSRILAG 378
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 121/245 (49%), Gaps = 5/245 (2%)
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
K S G+ + +EM +G D+ +Y++ ++ +CK G+ +A+K M G + +V+
Sbjct: 94 KESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVI 153
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
+N ++R++ + A ++ +M GC PSVVT N +I LC G + A +L +M
Sbjct: 154 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 213
Query: 274 PKKGCVPDVITYHCFFR--CLEKPRE-ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
P GC P+ ++Y+ C EK + + D M+ G P + TY LL + G +
Sbjct: 214 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 273
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGT 390
+ ++ GCSP YN ++D L G + A K +EM KGL KP +
Sbjct: 274 DVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGL--KPDIITYS 331
Query: 391 KLVQG 395
LV G
Sbjct: 332 SLVSG 336
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 107/211 (50%), Gaps = 5/211 (2%)
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
L +S Y+ CK +A+KL EM+ KG K DVV YN +I + +D A++
Sbjct: 81 SLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFL 140
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP 295
M GCQP+V+T N +++ +C GR +A +L++M +KGC P V+T++ L +
Sbjct: 141 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR- 199
Query: 296 REILG----LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFA 351
+ +LG + ++M G P +Y LL F + + M GC PD
Sbjct: 200 QGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 259
Query: 352 YNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
YN L+ AL G +D+A + ++ +KG S
Sbjct: 260 YNTLLTALCKDGKVDVAVEILNQLSSKGCSP 290
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 144/332 (43%), Gaps = 10/332 (3%)
Query: 60 NPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV-DALCEYKHVI 118
N S P+ T+ ++ ++EA+ N + +G + V N++ ++C +
Sbjct: 110 NKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWM 169
Query: 119 EAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
+A++L + G S V +N+++ + G+ + E+M G +
Sbjct: 170 DAEKL-LSDMLRKGCSPSVVT-----FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSL 223
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
SY+ + CK K +A++ M +G D+V YNT++ A+ VD A+ + ++
Sbjct: 224 SYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL 283
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE---KP 295
GC P ++T NTVI L + G+ A +L EM +KG PD+ITY L K
Sbjct: 284 SSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKV 343
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
E + F + GIRP TY ++ + M C P E Y L
Sbjct: 344 DEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTIL 403
Query: 356 VDALIDKGMLDMARKYDEEMFAKGLSAKPREE 387
++ + +G+ A E+ ++GL K E
Sbjct: 404 IEGIAYEGLAKEALDLLNELCSRGLVKKSSAE 435
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 161/375 (42%), Gaps = 54/375 (14%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQEL 123
P T+ I+ AH A+ F +L GL+ + N L+ CE K EA ++
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDI 168
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVV--KDLHSYS 181
+G + Y+++L+ G+ + M + G V D+ +YS
Sbjct: 169 LLHRTPELGC-----VPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYS 223
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF----------- 230
+D K G KA L+KEM ++GI D V Y++V+ A+ + +D
Sbjct: 224 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNK 283
Query: 231 ------------------------AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
A+RV++EMR P VVT + ++ LC+ G+++EA
Sbjct: 284 GVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 343
Query: 267 YAVLAEMPKKGCVPDVITYHCFFR------CLEKPREILGLFDRMIESGIRPKMDTYVML 320
V M KG P+V +Y CL ++ LFD M+ GI P + T+ +L
Sbjct: 344 RDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLV---DMTDLFDLMLGDGIAPDIYTFNVL 400
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
++ + G L +++ +M + G PD Y ++ AL G +D A + +M +G+
Sbjct: 401 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 460
Query: 381 SAKPREELGTKLVQG 395
+ P + L+QG
Sbjct: 461 A--PDKYAYHCLIQG 473
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 156/387 (40%), Gaps = 82/387 (21%)
Query: 83 VNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
VN+A F ++ + G+ D V+Y ++V ALC+ + + +A+ + + G++ N
Sbjct: 235 VNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFL----RQMVNKGVLPNNW 290
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
T YN ++ G+ W + ++EM + ++ D+ + S+ M +CK GK +A ++
Sbjct: 291 T--YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 348
Query: 202 EMKKKG-----------------------------------IKMDVVAYNTVIRAVGVSE 226
M KG I D+ +N +I+A
Sbjct: 349 TMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCG 408
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
+D AM ++ EMR+ G +P VVT TVI LC G++ +A +M +G PD YH
Sbjct: 409 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 468
Query: 287 CFFR------CLEKPREILG--------------------------------LFDRMIES 308
C + L K +E++ +FD +
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 528
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G+ P Y ML+ + G + V+ M G P++ Y LV+ G +D
Sbjct: 529 GLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEG 588
Query: 369 RKYDEEMFAKGLSAKPREELGTKLVQG 395
EM KG+ KP L ++ G
Sbjct: 589 LSLFREMLQKGI--KPSTILYNIIIDG 613
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 168/396 (42%), Gaps = 62/396 (15%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+SV+ L K D + + +M N +PN+ T+ + Y + EA+ F +
Sbjct: 256 TYSSVVHALCKARAMDKAEAFLRQMV-NKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKE 314
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL-----CFGENKNVGFSGLVEMNKTKIYN 146
+ L D V+ L+ +LC+Y + EA+++ G+N NV FS Y
Sbjct: 315 MRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNV-FS----------YT 363
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++L G+ + ++ M G+ D++++++ + G KA+ ++ EM+
Sbjct: 364 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDH 423
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS-------------------- 246
G+K DVV Y TVI A+ +D AM + +M + G P
Sbjct: 424 GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKA 483
Query: 247 ---------------VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------ 285
+V +++I LC+ GRV +A + G P + Y
Sbjct: 484 KELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDG 543
Query: 286 HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
+C +EK L +FD M+ +GI P Y L+ + + G + ++++M + G
Sbjct: 544 YCLVGKMEKA---LRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGI 600
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
P YN ++D L + G A+ EM G++
Sbjct: 601 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIA 636
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 156/388 (40%), Gaps = 50/388 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N +I D + + + M+D+ P+ T+R + +++AM FN+
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVK-PDVVTYRTVIAALCRIGKMDDAMEKFNQ 454
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + G+ D+ +Y L+ C + +++A+EL E N G ++ I+
Sbjct: 455 MIDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL-ISEIMNNGMH-----LDIVFFSSIINN 508
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K+ + ++ G+ YS+ MD C GK KA++++ M GI+ +
Sbjct: 509 LCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 568
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V Y T++ +D + ++REM + G +PS + N +I L E GR A
Sbjct: 569 DVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFH 628
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPR----------------------------------- 296
EM + G + TY+ R L K R
Sbjct: 629 EMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTR 688
Query: 297 ---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
E LF + SG+ P + TY +++ + G + ++ M+ GC PD N
Sbjct: 689 RVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLN 748
Query: 354 ALVDALIDKGMLDMARKY----DEEMFA 377
+V L+ K + A Y DE F+
Sbjct: 749 HVVRELLKKNEIVRAGAYLSKIDERNFS 776
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 144/320 (45%), Gaps = 10/320 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ TF ++ K Y ++++AM FN++ + G+K D V+Y ++ ALC + +A E
Sbjct: 392 PDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 451
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + + G + Y+ +++G+ K +E E+ G+ D+ +S
Sbjct: 452 -FNQMIDQGVA-----PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSI 505
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
++ +CK G+ A ++ G+ V Y+ ++ + ++ A+RV+ M G
Sbjct: 506 INNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 565
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL-EKPREILG-- 300
+P+ V T++ C+ GR+ E ++ EM +KG P I Y+ L E R +
Sbjct: 566 EPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 625
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
F M ESGI TY ++LR + ++K++ + + N ++ +
Sbjct: 626 KFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMF 685
Query: 361 DKGMLDMARKYDEEMFAKGL 380
++ A+ + GL
Sbjct: 686 QTRRVEEAKDLFASISRSGL 705
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 158/366 (43%), Gaps = 38/366 (10%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +VI L + + D + ++M D + P+ + + + + T + +A ++
Sbjct: 431 TYRTVIAALCRIGKMDDAMEKFNQMIDQGVA-PDKYAYHCLIQGFCTHGSLLKAKELISE 489
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGF------------------ 133
+ G+ D V + ++++ LC+ V++AQ + F NVG
Sbjct: 490 IMNNGMHLDIVFFSSIINNLCKLGRVMDAQNI-FDLTVNVGLHPTAVVYSMLMDGYCLVG 548
Query: 134 -------------SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
S +E N +Y ++ G+ K+ + + EM ++G+ Y
Sbjct: 549 KMEKALRVFDAMVSAGIEPNDV-VYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILY 607
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+I +D + ++G+ A + EM + GI M+ YN V+R + + D A+ +++E+R
Sbjct: 608 NIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRA 667
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---RE 297
M + +++T NT+I + + RV EA + A + + G VP V+TY L K E
Sbjct: 668 MNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEE 727
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+F M +G P ++R+ + + K++E S + LVD
Sbjct: 728 AEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVD 787
Query: 358 ALIDKG 363
KG
Sbjct: 788 LFSSKG 793
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 173/414 (41%), Gaps = 48/414 (11%)
Query: 21 VETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTA 80
V C TYN +I L KF + + + ++ M PN TF ++ + Y
Sbjct: 269 VMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMI-TLGCKPNSRTFCLLIEGYCRE 327
Query: 81 HLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEM 139
H + A+ +++++ L VSY +++ LC K + A +L + + FSGL
Sbjct: 328 HNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLL----EKMTFSGLKP- 382
Query: 140 NKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKL 199
+Y+ ++ G+ + R + M GV D+ Y+ + + K+GK +A
Sbjct: 383 -NVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 441
Query: 200 YKEMKKKGIKMDVVAYNTVI----RAVGVSEGVDF------------------------- 230
E++ +G+K D V + I + ++E +
Sbjct: 442 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFK 501
Query: 231 ------AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
A+ ++R + +G P V TC+ I L +NGRV+EA V +E+ +KG VPDV T
Sbjct: 502 AGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFT 561
Query: 285 YHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKME 341
Y K E+ L D M GI P + Y L+ + G ++ ++ M
Sbjct: 562 YSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP 621
Query: 342 ELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
E G PD Y+ ++D + A EM +KG+ +P + LV G
Sbjct: 622 EKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGV--QPHSFVYNALVHG 673
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 148/308 (48%), Gaps = 17/308 (5%)
Query: 83 VNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
V EA+ F++L E GL +V +Y +L+ C+ V +A EL + + G+
Sbjct: 540 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFEL----HDEMCLKGIAP--N 593
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
IYN ++ G K + R+ ++ M ++G+ D +YS +D CKS +A L+
Sbjct: 594 IFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFH 653
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
EM KG++ YN ++ ++ AM ++REM + G + ++ NT+I C++
Sbjct: 654 EMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSC 712
Query: 262 RVREAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPKMD 315
+++EA + EM K +PD +TY HC +E+ LF M E +
Sbjct: 713 KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANL---LFKEMQERNLIVDTV 769
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
TY L+ + + G VF +++KM G PDE Y ++ A + L A K +E+
Sbjct: 770 TYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEV 829
Query: 376 FAKGLSAK 383
KG+ K
Sbjct: 830 VGKGMLTK 837
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 153/350 (43%), Gaps = 33/350 (9%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNL----------VDALCE 113
+PN T+ I+ A +NEA TF ++ + GLK + + C+ +D +
Sbjct: 206 VPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLR 265
Query: 114 YKHVIEA--------------QELC-FGENKNVG--FSGLVEMN---KTKIYNMILRGWF 153
K V+ + LC FG+ + G++ + ++ + +++ G+
Sbjct: 266 IKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYC 325
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
+ G+ E +EM+KR +V SY ++ +C A KL ++M G+K +VV
Sbjct: 326 REHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVV 385
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
Y+T+I ++ A R+ M G P + N +I L + G++ EA L E+
Sbjct: 386 VYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 445
Query: 274 PKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
+G PD +T+ F K E FD M++ G+ P Y +L+ + G L
Sbjct: 446 QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNL 505
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+++ + LG PD +A + L+ G + A K E+ KGL
Sbjct: 506 MEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGL 555
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 116/243 (47%), Gaps = 4/243 (1%)
Query: 139 MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK 198
M +Y +++ G FK + + + GV+ D+ + S ++ + K+G+ +A+K
Sbjct: 486 MPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALK 545
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
++ E+K+KG+ DV Y+++I V+ A ++ EM G P++ N ++ LC
Sbjct: 546 VFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLC 605
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMD 315
++G ++ A + MP+KG PD +TY E E LF M G++P
Sbjct: 606 KSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF 665
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
Y L+ + G + ++++M + G + ++N L+D + A + +EM
Sbjct: 666 VYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEM 724
Query: 376 FAK 378
AK
Sbjct: 725 IAK 727
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 162/390 (41%), Gaps = 41/390 (10%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP---SSI-- 64
D KR L+FF W ++ D+++ + L F L+ ++ +M P SSI
Sbjct: 83 DPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILD 142
Query: 65 -----------PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCE 113
+ F I+ Y +++EA F + + CN +
Sbjct: 143 SVLFWFRNYGGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSL----- 197
Query: 114 YKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGV 173
+++G GLV T Y +I G + + + +EEM K G+
Sbjct: 198 ---------------RSMGEKGLVP--NTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGL 240
Query: 174 VKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMR 233
D ++ S +D + G + +++ M GI ++++ YN +I + ++ A
Sbjct: 241 KPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAE 300
Query: 234 VYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE 293
+ + M +GC+P+ T +I+ C + A +L EM K+ VP ++Y L
Sbjct: 301 ILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLC 360
Query: 294 KPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF 350
+++ L ++M SG++P + Y L+ + G + + M G +PD F
Sbjct: 361 HCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIF 420
Query: 351 AYNALVDALIDKGMLDMARKYDEEMFAKGL 380
YNA++ L G ++ A Y E+ +GL
Sbjct: 421 CYNAIISCLSKAGKMEEASTYLLEIQGRGL 450
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 158/349 (45%), Gaps = 18/349 (5%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN+++D L K + + L M + P+ T+ M Y + V EA F+++
Sbjct: 597 YNALVDGLCKSGDIQRARKLFDGMPEKGLE-PDSVTYSTMIDGYCKSENVAEAFSLFHEM 655
Query: 94 DEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
G++ Y LV C+ + +A L F E GF+ T +N ++ G+
Sbjct: 656 PSKGVQPHSFVYNALVHGCCKEGDMEKAMNL-FREMLQKGFA------TTLSFNTLIDGY 708
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K + + ++EM + ++ D +Y+ +D CK+GK +A L+KEM+++ + +D
Sbjct: 709 CKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDT 768
Query: 213 VAYNTVI---RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
V Y +++ +G S V FA+ + +M G +P VT VI C+ + EA+ +
Sbjct: 769 VTYTSLMYGYNKLGQSSEV-FAL--FEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKL 825
Query: 270 LAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
E+ KG + + L E E L D M E G++P + L+R F
Sbjct: 826 RDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHE 885
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
G + V++ ++ LG PD LV+ ++ + AR +++
Sbjct: 886 AGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 934
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 175/391 (44%), Gaps = 54/391 (13%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
Y +V++ L K +++L+ R+ + S+ PN + I+ + +++ A N++
Sbjct: 181 YGTVMNGLCKKGHTQKAFDLL-RLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEM 239
Query: 94 DEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIYNMIL 149
+ + ++ +Y L+DALC+ L EN F ++ +N +N ++
Sbjct: 240 KQKSIPPDIFTYSTLIDALCK---------LSQWENVRTLFLEMIHLNIYPNVCTFNSVI 290
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G K E M ++GV D+ +Y++ +D G+ +A +++ M K I+
Sbjct: 291 DGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIE 350
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
++++YN +I + +D AM+V RE+ + G +PS+VTCN ++ L E GR + A
Sbjct: 351 PNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNF 410
Query: 270 LAEMPKKGCVPDVITYHC-----------------FFRCLEKPRE----------ILGL- 301
EM G +PD+ T HC F LE+ RE I GL
Sbjct: 411 FDEMLSAGHIPDLYT-HCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLC 469
Query: 302 -----------FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF 350
F+++ G+ P + TY ++ + + G L + +KME+ GC D
Sbjct: 470 KNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNR 529
Query: 351 AYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
YN +V + + + + EE+ K S
Sbjct: 530 TYNVIVRGFLRSNKVSEMKAFLEEIAGKSFS 560
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 114/242 (47%), Gaps = 9/242 (3%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+Y ++ G K K + M++ + YSI +D CK G A L EM
Sbjct: 180 MYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEM 239
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
K+K I D+ Y+T+I A+ + ++ EM + P+V T N+VI LC+ G+V
Sbjct: 240 KQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKV 299
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRC------LEKPREILGLFDRMIESGIRPKMDTY 317
+A ++ M +KG PDVITY+ +++ REI FD MI I P + +Y
Sbjct: 300 EDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREI---FDSMINKSIEPNIISY 356
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
+L+ + R + V +++ + G P N L+ L + G A+ + +EM +
Sbjct: 357 NILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLS 416
Query: 378 KG 379
G
Sbjct: 417 AG 418
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 110/246 (44%), Gaps = 8/246 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN +ID G + D + + M N S PN ++ I+ Y ++EAM +
Sbjct: 320 TYNMIIDGYGLRGQVDRAREIFDSMI-NKSIEPNIISYNILINGYARQKKIDEAMQVCRE 378
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + GLK + CN L+ L E AQ F E + G + + +L G
Sbjct: 379 ISQKGLKPSIVTCNVLLHGLFELGRTKSAQNF-FDEMLSAG-----HIPDLYTHCTLLGG 432
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+FK + + ++++R ++ Y+ +D +CK+GK KA ++++ G+ D
Sbjct: 433 YFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPD 492
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V+ Y +I +D A + R+M + GC T N +++ + +V E A L
Sbjct: 493 VITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLE 552
Query: 272 EMPKKG 277
E+ K
Sbjct: 553 EIAGKS 558
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 123/261 (47%), Gaps = 12/261 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+NSVID L K + + + ++ M + P+ T+ ++ Y V+ A F+
Sbjct: 285 TFNSVIDGLCKEGKVEDAEEIMRYMIEKGVD-PDVITYNMIIDGYGLRGQVDRAREIFDS 343
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY--NMIL 149
+ ++ + SY L++ K + EA ++C + + GL K I N++L
Sbjct: 344 MINKSIEPNIISYNILINGYARQKKIDEAMQVC----REISQKGL----KPSIVTCNVLL 395
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G F++ + F++EM G + DL+++ + K+G +A+ + +++++
Sbjct: 396 HGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRRED 455
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
++ Y VI + + +D A + ++ +G P V+T +I C+ G + EA +
Sbjct: 456 TNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDM 515
Query: 270 LAEMPKKGCVPDVITYHCFFR 290
L +M GC+ D TY+ R
Sbjct: 516 LRKMEDNGCLADNRTYNVIVR 536
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 118/294 (40%), Gaps = 45/294 (15%)
Query: 132 GFSGLVEMNKTK------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
FS +M +TK ++ +L+ M + + E+ K + SI ++
Sbjct: 56 AFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVN 115
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM-REMGCQ 244
C + + KKGI + V +NT++R + V A+ +++++ RE C+
Sbjct: 116 SCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICE 175
Query: 245 PSVVTCNTVIKLLCENGRVREAY-----------------------------------AV 269
P+ V TV+ LC+ G ++A+ ++
Sbjct: 176 PNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSL 235
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPRE---ILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
L EM +K PD+ TY L K + + LF MI I P + T+ ++ +
Sbjct: 236 LNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCK 295
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G + + + M E G PD YN ++D +G +D AR+ + M K +
Sbjct: 296 EGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSI 349
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 7/125 (5%)
Query: 83 VNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
+++A TF KL GL D ++Y ++ C+ + EA+++ N G + N+
Sbjct: 474 LDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDN----GCLADNR 529
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
T YN+I+RG+ + + + + F EE+ + + + + MDI+ + + +
Sbjct: 530 T--YNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAEDPSLLNMIPEFH 587
Query: 202 EMKKK 206
KK
Sbjct: 588 RDNKK 592
>gi|255661036|gb|ACU25687.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 376
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 120/233 (51%), Gaps = 5/233 (2%)
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
SG VE + T Y +I+ G+ K + K E + +G V D +YS ++ +CK K
Sbjct: 88 SGFVEDSIT--YGIIIDGFCKNGYINKSLHVLEIAEGKGGVLDAFAYSAMINGLCKEAKL 145
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
KAV + M K G K + YNT+I + D A+RV+REM M C P++VT +T+
Sbjct: 146 DKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFDDAIRVFREMGSMDCSPTIVTYHTL 205
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGI 310
I LC+ R EAY ++ EM +KG P VITY + L + ++ L L+++++ G
Sbjct: 206 INGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVLSKGF 265
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
+P + + +L+ G + +++ M C+P+ +N L++ G
Sbjct: 266 KPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTHNTLMEGFYKDG 318
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 104/251 (41%), Gaps = 34/251 (13%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+N+++RG F K WE M K G V+D +Y I +D CK+G K++ + + +
Sbjct: 62 FNIMMRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEIAE 121
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
KG +D AY+ +I + +D A+ V M + GC+P+ NT+I +
Sbjct: 122 GKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFD 181
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
+A V EM C P ++TYH L K +D +
Sbjct: 182 DAIRVFREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLV------------------- 222
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
K+M E G P Y+ L+ L ++MA + ++ +KG KP
Sbjct: 223 -------------KEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVLSKGF--KP 267
Query: 385 REELGTKLVQG 395
++ L+ G
Sbjct: 268 DVQMHNILIHG 278
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 4/221 (1%)
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
+ + EM + V D Y+ + + G+ L++ M +KG +VV++N ++R
Sbjct: 10 KRVYMEMAESKVSPDAVVYNAMLIGFLRVGRIKDCFDLWELMGRKG-SQNVVSFNIMMRG 68
Query: 222 VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
+ + VD A+ ++ M++ G +T +I C+NG + ++ VL KG V D
Sbjct: 69 LFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEIAEGKGGVLD 128
Query: 282 VITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWK 338
Y L K ++ + + + MI+SG +P Y L+ F V++
Sbjct: 129 AFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFDDAIRVFR 188
Query: 339 KMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+M + CSP Y+ L++ L A +EM KG
Sbjct: 189 EMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKG 229
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 117/261 (44%), Gaps = 43/261 (16%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
Y+++I+ L K + D + ++++ M + PN + + +V A ++A+ F +
Sbjct: 131 AYSAMINGLCKEAKLDKAVSVLNGMIKSGCK-PNAHVYNTLINGFVGASKFDDAIRVFRE 189
Query: 93 LDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ V+Y L++ LC+ + EA +L + M+ +G
Sbjct: 190 MGSMDCSPTIVTYHTLINGLCKGERFSEAYDL--------------------VKEMLEKG 229
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
W K V+ +YS+ M +C+ K A++L+ ++ KG K D
Sbjct: 230 W-----------------KPCVI----TYSLLMKGLCQGHKVEMALQLWNQVLSKGFKPD 268
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V +N +I + A+ +Y +M C P++VT NT+++ ++G +R A + A
Sbjct: 269 VQMHNILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTHNTLMEGFYKDGDIRNALVIWA 328
Query: 272 EMPKKGCVPDVITYHCFFRCL 292
+ + G PD+I+Y+ + L
Sbjct: 329 RILRSGLQPDIISYNITLKGL 349
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 6/174 (3%)
Query: 225 SEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
S +D A RVY EM E P V N ++ GR+++ + + M +KG +V++
Sbjct: 3 SGDIDGAKRVYMEMAESKVSPDAVVYNAMLIGFLRVGRIKDCFDLWELMGRKGS-QNVVS 61
Query: 285 YHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKME 341
++ R L E+ + +++ M +SG TY +++ F + G++ V + E
Sbjct: 62 FNIMMRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEIAE 121
Query: 342 ELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
G D FAY+A+++ L + LD A M G KP + L+ G
Sbjct: 122 GKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSG--CKPNAHVYNTLING 173
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 164/373 (43%), Gaps = 12/373 (3%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
ALE F ++ D ++ Y S+I IL + FD L M+ N T+ +M
Sbjct: 57 ALELFESLKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQ-REGQRGNAVTYNVM 115
Query: 74 FKRY-VTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNV 131
Y + F ++ + + D+ +Y ++ A + H EA L F E K
Sbjct: 116 LDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRL-FQEMKEA 174
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
G N+ YN +L + K + E EM+ G+ ++ +Y+ + ++G
Sbjct: 175 GCCP----NRV-TYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAG 229
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
+A L K + KG+ D Y T+I A +E + A+ + EMR+ C P++VT N
Sbjct: 230 LCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYN 289
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIES 308
+I + ++ + V M +K C PD++T++ + E+ +F M +
Sbjct: 290 ILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRA 349
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G P +DT+ +L+ +GR G++ ++K + G P + AL+ +L +G
Sbjct: 350 GYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQC 409
Query: 369 RKYDEEMFAKGLS 381
K +EM GL
Sbjct: 410 EKVSQEMAEAGLQ 422
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 160/354 (45%), Gaps = 24/354 (6%)
Query: 33 TYNSVIDILGKFFE-FDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
TYN ++D+ GK + +D +L MKD S P+ T+ M + EA+ F
Sbjct: 111 TYNVMLDLYGKRGDSWDRIQSLFQEMKDLEIS-PDDYTYNTMITACIQNSHCQEALRLFQ 169
Query: 92 KLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI------ 144
++ E G + V+Y L+D + EA EL LVEM I
Sbjct: 170 EMKEAGCCPNRVTYNALLDVYGKGGMHKEASEL------------LVEMEAAGISPNIVT 217
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ + + + + + +G+ D +Y + ++ + KA++ + EM+
Sbjct: 218 YNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMR 277
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K ++V YN +I G E +D M+V++ M+E C P +VT N+++K G +
Sbjct: 278 KTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLT 337
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
E V EM + G +P V T++ C + + + ++ ++ +G++P + T+ L+
Sbjct: 338 EVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALM 397
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
R G + V ++M E G + + L+ + + G RKY +E+
Sbjct: 398 ASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDEL 451
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 164/399 (41%), Gaps = 64/399 (16%)
Query: 8 ANDWKRALEFFNWV-ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
A +++ALE F + +T+C T TYN +IDI G+ + D + M++ + P+
Sbjct: 263 AERYEKALETFTEMRKTNC--TPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEK-NCTPD 319
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFG 126
T+ + K + ++ E F ++ G V N++ IE C+G
Sbjct: 320 LVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNIL---------IE----CYG 366
Query: 127 ENKNVGFS-----GLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGV-VKD- 176
V +S GL+ + ++ + W +C + +EM + G+ + D
Sbjct: 367 RCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDA 426
Query: 177 -----LHSYS---------IYMDIMCKSGKPWKAVKLYK--------------------E 202
+HSY+ Y+D + KS K + L K +
Sbjct: 427 CHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMDNEAQLALNQ 486
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
+ G D+ +N +I ++ A+++ E+R+ +P VT N ++ + G
Sbjct: 487 LYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGM 546
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVM 319
+A V++EM + G P++ITY+ K + +F M+ + +RP T+
Sbjct: 547 YHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNT 606
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
L+ + G + V + M E GC P + + AL+D
Sbjct: 607 LVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDG 645
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 157/393 (39%), Gaps = 59/393 (15%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN+++D+ GK + L+ M+ S PN T+ + Y A L +EA
Sbjct: 182 TYNALLDVYGKGGMHKEASELLVEMEAAGIS-PNIVTYNELIAAYARAGLCDEAAALKKS 240
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK------IY 145
L GL DE +YC L+ A + +A E EM KT Y
Sbjct: 241 LLSKGLCPDEFTYCTLISAFNRAERYEKALET------------FTEMRKTNCTPNIVTY 288
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N+++ + +M + ++ M ++ DL +++ + G + +++EMK+
Sbjct: 289 NILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKR 348
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G V +N +I G VD+++ +Y+ + G QP+V T ++ L GR ++
Sbjct: 349 AGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQ 408
Query: 266 AYAVLAEMPKKG------CVPDVITYHC----FFRC------LEKP--REILGLF----- 302
V EM + G C +I + FF+ LEK + + G+
Sbjct: 409 CEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFV 468
Query: 303 ----------------DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
+++ ++G P + + ++ + G++ + +++ +
Sbjct: 469 LAYCKCCMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLK 528
Query: 347 PDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
PD YN L+ +GM A + EM G
Sbjct: 529 PDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAG 561
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 94/205 (45%), Gaps = 6/205 (2%)
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKG-IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE- 240
++ + + GK KA+++++ ++K K+ VA +++ +G E + A+ ++ +++
Sbjct: 8 FVKALGRQGKWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQD 67
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE--- 297
V ++I +L R E + M ++G + +TY+ K +
Sbjct: 68 ESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWD 127
Query: 298 -ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
I LF M + I P TY ++ + + ++++M+E GC P+ YNAL+
Sbjct: 128 RIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALL 187
Query: 357 DALIDKGMLDMARKYDEEMFAKGLS 381
D GM A + EM A G+S
Sbjct: 188 DVYGKGGMHKEASELLVEMEAAGIS 212
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 169/371 (45%), Gaps = 24/371 (6%)
Query: 13 RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
+A +FF+ + + T ++ ++ L K + + L ++M+ + S P+ T I
Sbjct: 79 QAFQFFHLMMYS-NPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGIS-PDCCTLNI 136
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNV 131
+ + V E + + G + D V+Y L+ LC +H I L F + +
Sbjct: 137 LLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLC-MEHRISKAALLFTRMQKL 195
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH------SYSIYMD 185
G + Y +++G + + +EM + ++ SYSI +D
Sbjct: 196 GCTP-----NAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIID 250
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
+CK + +A L++EMK +G+ V++Y ++I + A R++ EM G QP
Sbjct: 251 ALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQP 310
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCLEKPREIL 299
+VVT N +I +LC+ G+V EA +L M ++G VP+++TY+ C L RE
Sbjct: 311 NVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARE-- 368
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
LF M G P + Y +L+ + + + ++ M ++G PD Y AL+ L
Sbjct: 369 -LFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGL 427
Query: 360 IDKGMLDMARK 370
G + A+K
Sbjct: 428 FQGGKVGDAKK 438
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 142/293 (48%), Gaps = 23/293 (7%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDIL---GKFFEF-DLSWNLIHRMKDNP 61
C W+ A FN + + T+N +ID+L GK E DL +I R
Sbjct: 288 CCGGKWEEAKRLFNEM-VNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQR----- 341
Query: 62 SSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA 120
+PN T+ + + + +N A F + G + D + Y L++ C+ V EA
Sbjct: 342 GIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEA 401
Query: 121 QELCFGENKNVGFSGLVEMNK---TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
+L ++G++++ K K Y +L G F+ G ++ + M G+ DL
Sbjct: 402 MKL---------YNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDL 452
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
+ Y I+++ +CK+G ++A++L+ ++K IK+D+ +N +I + + ++ A ++ +
Sbjct: 453 YIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEK 512
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR 290
+ + QP VVT N +I C G+V +A + +M K GC PD ITY R
Sbjct: 513 LPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIR 565
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 162/345 (46%), Gaps = 11/345 (3%)
Query: 26 HFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNE 85
+F +Y+ +ID L K D + +L MK + P ++ + + E
Sbjct: 237 NFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMT-PTVISYTSLIHGFCCGGKWEE 295
Query: 86 AMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI 144
A FN++ G++ V N L+D LC+ VIEA++L + + G+V T
Sbjct: 296 AKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLL----EVMIQRGIVPNLLT-- 349
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G+ + RE + M +G D+ Y++ ++ CK+ K +A+KLY M
Sbjct: 350 YNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGML 409
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+ G + DV Y ++ + V A +++ M+ G + + LC+NG +
Sbjct: 410 QVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLF 469
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLL 321
EA + ++ D+ ++C L K ++ LF+++ + ++P + TY +++
Sbjct: 470 EAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMI 529
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
+F R G + ++++KME+ GC+PD+ Y L+ + L+
Sbjct: 530 HEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLE 574
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 157/386 (40%), Gaps = 28/386 (7%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F H T N +FF M NP+ P ++F + ++
Sbjct: 66 FLHNCKTGNITATQAFQFFHL--------MMYSNPT--PPLSSFTHLLSGLAKIKHYSQV 115
Query: 87 MGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
+N++ G+ + N L++ LC V E + G + +V Y
Sbjct: 116 FYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVT------Y 169
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
+++G K + M K G + +Y M +C++G A+KL++EM
Sbjct: 170 TTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLN 229
Query: 206 K----GI--KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCE 259
GI K V++Y+ +I A+ D A ++ EM+ G P+V++ ++I C
Sbjct: 230 DSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCC 289
Query: 260 NGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDT 316
G+ EA + EM +G P+V+T++ L K +++ L + MI+ GI P + T
Sbjct: 290 GGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLT 349
Query: 317 YVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
Y L+ F G L ++ M GC PD Y L++ ++ A K M
Sbjct: 350 YNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGML 409
Query: 377 AKG--LSAKPREELGTKLVQGGLDGE 400
G K L T L QGG G+
Sbjct: 410 QVGKRPDVKTYGALLTGLFQGGKVGD 435
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 139/317 (43%), Gaps = 46/317 (14%)
Query: 102 VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI-YNMILRGWFKMSWWGK 160
+SY ++DALC+ + EA++L F E K G M T I Y ++ G+ W +
Sbjct: 243 ISYSIIIDALCKDRREDEARDL-FEEMKVQG------MTPTVISYTSLIHGFCCGGKWEE 295
Query: 161 CREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIR 220
+ + EM +GV ++ ++++ +D++CK GK +A L + M ++GI +++ YN++I
Sbjct: 296 AKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIE 355
Query: 221 AVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVP 280
+ ++ A ++ M GC+P V+ +I C+ +V EA + M + G P
Sbjct: 356 GFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRP 415
Query: 281 DVITYHCFFRCLEK------PREILG--------------------------------LF 302
DV TY L + +++ G LF
Sbjct: 416 DVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELF 475
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
+++ I+ ++ + L+ + G L + +++K+ + PD YN ++
Sbjct: 476 NKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRG 535
Query: 363 GMLDMARKYDEEMFAKG 379
G + A ++M G
Sbjct: 536 GQVVKANILFQKMEKNG 552
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 13/132 (9%)
Query: 85 EAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVE---MN 140
EAM FNKL + +K ++ N L+D LC+ + A EL F L +
Sbjct: 470 EAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWEL---------FEKLPQEELQP 520
Query: 141 KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
YN+++ + + K +++M+K G D +Y+ + +S K K V+L
Sbjct: 521 DVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELL 580
Query: 201 KEMKKKGIKMDV 212
M ++ + +DV
Sbjct: 581 HMMVQRDVSLDV 592
>gi|224133318|ref|XP_002321537.1| predicted protein [Populus trichocarpa]
gi|222868533|gb|EEF05664.1| predicted protein [Populus trichocarpa]
Length = 834
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 175/396 (44%), Gaps = 51/396 (12%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D AL FF+W++ F H TY +++ ILG+ +F L+ +M + P T
Sbjct: 317 DHTVALGFFHWLKQLPGFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQ-PTVVT 375
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGEN 128
+ + Y A+ +N+A+ FN++ + G + D V+YC L+D I A+
Sbjct: 376 YNRLIHSYGRANYLNDAVEVFNQMQKAGCEPDRVTYCTLID--------IHAK------- 420
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
GF +N F M E ++ M G+ D +YS+ ++ +
Sbjct: 421 --AGF-----LN------------FAM-------EMYQRMQAAGLSPDTFTYSVMINCLG 454
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
K+G A KL+ EM ++G ++V YN +I + A+++YR+M+ G +P V
Sbjct: 455 KAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGFEPDKV 514
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGL---FDRM 305
T + V+++L +G + EA A+ +EM +K VPD Y K + + M
Sbjct: 515 TYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQAM 574
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID-KGM 364
+ +G+ P + T LL F R L + + + M LG +P Y L+ + +
Sbjct: 575 LHAGLCPNVPTCNSLLSAFLRVNRLPDAYNLLQSMLNLGLNPSLQTYTLLLSCCTEARSP 634
Query: 365 LDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGE 400
DM Y E M G P + L G DG+
Sbjct: 635 YDMG-CYCELMSVTG---HPAHMFLSSLPSAGPDGQ 666
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 15/190 (7%)
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR----------EMGCQPSVVTCNTVI 254
+ KM V + + V V+ ++ R++R + C N V+
Sbjct: 253 SRDTKMPAVVARSARQFVSTGHVVENVSQILRQLRWGPSAEEALVNLNCHMDAYQANQVL 312
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIR 311
K L ++ + L ++P G D TY L + ++ + L D+M+ G +
Sbjct: 313 KQLQDHTVALGFFHWLKQLP--GFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQ 370
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
P + TY L+ +GR +L V+ +M++ GC PD Y L+D G L+ A +
Sbjct: 371 PTVVTYNRLIHSYGRANYLNDAVEVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEM 430
Query: 372 DEEMFAKGLS 381
+ M A GLS
Sbjct: 431 YQRMQAAGLS 440
>gi|302829725|ref|XP_002946429.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
gi|300268175|gb|EFJ52356.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
Length = 961
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 162/365 (44%), Gaps = 55/365 (15%)
Query: 12 KRALEFFNWV---ETDCHFTHTTD--TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
KRA+E F+W+ E + D TY ++I G + + L+ M+
Sbjct: 252 KRAVEIFDWLRNLEPSHELSSLCDLYTYTTMISQCGSHQQLRRALELVAEMRSRGID--- 308
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFG 126
H + M K +E L +V YK ++E G
Sbjct: 309 -----------CNVHTYSALMNVCIKANELDLAQDV-----------YKQMLEE-----G 341
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
+ N+ YN+++ + K W + + + ++K+ + ++ +Y+ +
Sbjct: 342 CSPNL-----------VTYNILIDVYVKRCQWEEAVKVLDTLEKQAIQAEVRTYNTVISA 390
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
KSG+P +A+K+Y++M G+K Y +I A G V+ A+ ++R+M GC+ +
Sbjct: 391 CNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALEIFRDMIRRGCERN 450
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL------EKPREILG 300
V+T +++I + GR A + ++M K+ C P+V+T++ EK E
Sbjct: 451 VITYSSLISACEKAGRWEMALELFSKMHKENCKPNVVTFNSLIAACSHGGHWEKASE--- 507
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
LF++M G +P TY L+ + R G R +++M+ GC PD +N+L++ L
Sbjct: 508 LFEQMQTQGCKPDSITYCGLITAYERGGQWRRALKAFEQMQTQGCHPDAAVFNSLMEVLW 567
Query: 361 DKGML 365
G+L
Sbjct: 568 QSGVL 572
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 133/286 (46%), Gaps = 9/286 (3%)
Query: 97 GLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMS 156
L D +Y ++ ++ + A EL E ++ G V Y+ ++ K +
Sbjct: 272 SLCDLYTYTTMISQCGSHQQLRRALEL-VAEMRSRGIDCNVH-----TYSALMNVCIKAN 325
Query: 157 WWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
++ +++M + G +L +Y+I +D+ K + +AVK+ ++K+ I+ +V YN
Sbjct: 326 ELDLAQDVYKQMLEEGCSPNLVTYNILIDVYVKRCQWEEAVKVLDTLEKQAIQAEVRTYN 385
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
TVI A S + A++VY +M G +PS T +I + G+V +A + +M ++
Sbjct: 386 TVISACNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALEIFRDMIRR 445
Query: 277 GCVPDVITYHCFFRCLEKPRE---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
GC +VITY EK L LF +M + +P + T+ L+ G
Sbjct: 446 GCERNVITYSSLISACEKAGRWEMALELFSKMHKENCKPNVVTFNSLIAACSHGGHWEKA 505
Query: 334 FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++++M+ GC PD Y L+ A G A K E+M +G
Sbjct: 506 SELFEQMQTQGCKPDSITYCGLITAYERGGQWRRALKAFEQMQTQG 551
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 5/167 (2%)
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC 291
+R E+ + T T+I + ++R A ++AEM +G +V TY
Sbjct: 261 LRNLEPSHELSSLCDLYTYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNV 320
Query: 292 LEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
K E+ ++ +M+E G P + TY +L+ + + V +E+ +
Sbjct: 321 CIKANELDLAQDVYKQMLEEGCSPNLVTYNILIDVYVKRCQWEEAVKVLDTLEKQAIQAE 380
Query: 349 EFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
YN ++ A G + A K E+M A G+ KP T L+
Sbjct: 381 VRTYNTVISACNKSGQPEQALKVYEKMLAAGV--KPSATTYTALISA 425
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 174/389 (44%), Gaps = 20/389 (5%)
Query: 13 RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
RA EFF ++ D +Y+++ID L K ++ M +PN T+
Sbjct: 220 RAFEFFREMK-DKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMT-RVGLLPNEFTYSS 277
Query: 73 MFKRYVTAHLVNEA-MGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNV 131
+ A + EA M L E + V+Y L+D LCE + EA+EL + +
Sbjct: 278 LIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELF----RAM 333
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
G +G+ + Y ++ G K+ K E + EM ++ + D+ + + +C
Sbjct: 334 GKAGVTP--NLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSES 391
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
K + + EMK+ GI + V Y T++ A + A+ + EMR++G + +VVT
Sbjct: 392 KLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFC 451
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCLEKPREILGLFDRM 305
+I LC+ G V+EA MP P+V Y C C+ ++ LFD M
Sbjct: 452 ALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKK---LFDEM 508
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
+ + P Y ++ + G + + KM E+G D +AY +LV L G +
Sbjct: 509 QDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQV 568
Query: 366 DMARKYDEEMFAKGLSAKPREELGTKLVQ 394
ARK+ EM KG+ P E L T+L++
Sbjct: 569 QQARKFLAEMIGKGII--PDETLCTRLLR 595
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 167/376 (44%), Gaps = 28/376 (7%)
Query: 23 TDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHL 82
T F HTT++Y ++ IL + + N++ + + +P F I+ + T ++
Sbjct: 1 TRVGFRHTTESYCILVHILFYARMYFHANNILKELVLSSWVLPGSDVFEIL---WTTRNV 57
Query: 83 VNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKT 142
G F+ L F + E+ ++EA CF + + + K
Sbjct: 58 CVPGFGVFDAL--FSVLVELG-------------MLEAAGQCF-----LRMTKFRVLPKA 97
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
+ N L K R+F+ +M G+ + +Y+I + +CK G A L+++
Sbjct: 98 RSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQ 157
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
MKK G+ D+V YNT+I G +D ++ ++ EM+ MGC+P V+T N +I C+
Sbjct: 158 MKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKG 217
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVM 319
+ A+ EM K P+VI+Y L K + + F M G+ P TY
Sbjct: 218 MLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSS 277
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L+ + G L F++ +M + + Y L+D L ++GM++ A + M G
Sbjct: 278 LIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAG 337
Query: 380 LSAKPREELGTKLVQG 395
++ P + T L+ G
Sbjct: 338 VT--PNLQAYTALIHG 351
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 97/215 (45%), Gaps = 7/215 (3%)
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N + + Y A EA+ ++ + G + V++C L+D LC+ V EA
Sbjct: 411 NPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYY- 469
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
FG + V +Y ++ G K + G ++ ++EM + ++ D +Y+ +
Sbjct: 470 FGRMPDHDLQPNV-----AVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMI 524
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D K G +A+ + +M + GI++D+ AY +++ + V A + EM G
Sbjct: 525 DGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGII 584
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
P C +++ E G + EA + E+ +KG +
Sbjct: 585 PDETLCTRLLRKHYELGNIDEAIELQNELVEKGLI 619
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 17/290 (5%)
Query: 98 LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG-FSGLVEMNKTKIYNMILRGWFKMS 156
L D VSY L+ C ++++A L F E +++ F +V YN +L G +
Sbjct: 371 LPDVVSYNTLIYGYCRLGNLMKA-FLLFDELRSIYLFPTIV------TYNTLLDGLCRQG 423
Query: 157 WWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
++ EM G+ D+ +Y+I ++ CK G A + + EM +G+++D AY
Sbjct: 424 ELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYA 483
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
T I A + EM G P ++ N V+ LC+ G + EA +L +M
Sbjct: 484 TRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSD 543
Query: 277 GCVPDVITYHCFFRC------LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
G +PD +TY L K REI F M+ G+ P + TY +L+ G L
Sbjct: 544 GVIPDYVTYTSIIHAHLENGRLRKGREI---FYEMLSKGLTPSVVTYTVLIHGHAGKGRL 600
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
F+ + +M+E G P+ YN+L++ L +D A + EM KG+
Sbjct: 601 ERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGI 650
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 173/394 (43%), Gaps = 23/394 (5%)
Query: 4 LSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGK---------FFEFDLSWNLI 54
LS + + AL F W E+ F + + ++++IL + E ++ N+
Sbjct: 88 LSSFRTSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANM- 146
Query: 55 HRMKDN-----PSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVD 109
HR+ D SS + ++ Y +V + + F+K+ + L +V CN +
Sbjct: 147 HRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRIL 206
Query: 110 ALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMD 169
+ K ++ + + +G G+ T YN +L + K + + EM
Sbjct: 207 RILRDKDLMSKAVEVY---RTMGEFGIKPTIVT--YNTLLDSYCKGGKVQQGLDLLSEMQ 261
Query: 170 KRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVD 229
+RG + +Y++ ++ + K G+ +A L EM K G+K+ YN +I +
Sbjct: 262 RRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLA 321
Query: 230 FAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF 289
A+ + EM G P+V T N+ I LC+ GR+ +A L++M +PDV++Y+
Sbjct: 322 EALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLI 381
Query: 290 RC---LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
L + LFD + + P + TY LL R G L + +M G +
Sbjct: 382 YGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIA 441
Query: 347 PDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
PD Y LV+ G L MA+++ +EM +GL
Sbjct: 442 PDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 475
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 127/263 (48%), Gaps = 9/263 (3%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWG 159
D V+Y LV+ C+ + AQE F E + G +E++ + Y + G K+
Sbjct: 443 DIVTYTILVNGSCKMGSLSMAQEF-FDEMLHEG----LELD-SYAYATRIVGELKLGDTS 496
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+ EEM +G DL Y++ +D +CK G +A +L ++M G+ D V Y ++I
Sbjct: 497 RAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSII 556
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
A + + ++ EM G PSVVT +I GR+ A+ +EM +KG +
Sbjct: 557 HAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGIL 616
Query: 280 PDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVV 336
P+VITY+ L K R + F M+E GI P +Y +L+ + G + +
Sbjct: 617 PNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSL 676
Query: 337 WKKMEELGCSPDEFAYNALVDAL 359
+K+M + G PD ++AL+ L
Sbjct: 677 YKQMLDRGVQPDSCTHSALLKQL 699
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 160/382 (41%), Gaps = 70/382 (18%)
Query: 82 LVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENK----------N 130
L+++A+ + + EFG+K V+Y L+D+ C+ V + +L + N
Sbjct: 214 LMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYN 273
Query: 131 VGFSGLV-------------EMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKR 171
V +GL EM KT + YN ++ G+F + EEM +
Sbjct: 274 VLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLK 333
Query: 172 GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFA 231
G + +Y+ ++ +CK G+ A++ +M + DVV+YNT+I + A
Sbjct: 334 GASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKA 393
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------ 285
++ E+R + P++VT NT++ LC G + A + EM +G PD++TY
Sbjct: 394 FLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNG 453
Query: 286 HCFFRCLEKPRE--------------------ILG------------LFDRMIESGIRPK 313
C L +E I+G L + M+ G P
Sbjct: 454 SCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPD 513
Query: 314 MDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDE 373
+ Y +++ + G L + +KM G PD Y +++ A ++ G L R+
Sbjct: 514 LIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFY 573
Query: 374 EMFAKGLSAKPREELGTKLVQG 395
EM +KGL+ P T L+ G
Sbjct: 574 EMLSKGLT--PSVVTYTVLIHG 593
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 158/333 (47%), Gaps = 28/333 (8%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + +A F+ + + F T TYN+++D L + E +++ L M N P
Sbjct: 385 CRLGNLMKAFLLFDELRSIYLFP-TIVTYNTLLDGLCRQGELEVAQQLKVEMI-NEGIAP 442
Query: 66 NHATFRIMFKRYVTAHLVNEA--MGTFNKLDEFGLKDEVSYCNL-VDALCEYKHVIEAQE 122
+ T+ I LVN + MG+ + EF DE+ + L +D+ ++ E
Sbjct: 443 DIVTYTI---------LVNGSCKMGSLSMAQEFF--DEMLHEGLELDSYAYATRIV--GE 489
Query: 123 LCFGENKNVGFSGLVEM------NKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
L G+ FS EM IYN+++ G K+ + E ++M GV+ D
Sbjct: 490 LKLGDTSR-AFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPD 548
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
+Y+ + ++G+ K +++ EM KG+ VV Y +I ++ A +
Sbjct: 549 YVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFS 608
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF--RC-LE 293
EM+E G P+V+T N++I LC+ R+ +AY AEM +KG P+ +Y C +
Sbjct: 609 EMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMG 668
Query: 294 KPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
+E L L+ +M++ G++P T+ LL++ G+
Sbjct: 669 NWQEALSLYKQMLDRGVQPDSCTHSALLKQLGK 701
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 122/275 (44%), Gaps = 18/275 (6%)
Query: 5 SCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLS--WNLIHRM--KDN 60
SC A EFF+ + H D+Y I+G+ D S ++L M K
Sbjct: 454 SCKMGSLSMAQEFFDEM---LHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGF 510
Query: 61 PSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIE 119
P P+ + ++ + EA K+ G + D V+Y +++ A E + +
Sbjct: 511 P---PDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRK 567
Query: 120 AQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
+E+ F E + G + V Y +++ G + ++ EM ++G++ ++ +
Sbjct: 568 GREI-FYEMLSKGLTPSV-----VTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVIT 621
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y+ ++ +CK + +A + EM +KGI + +Y +I A+ +Y++M
Sbjct: 622 YNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQML 681
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
+ G QP T + ++K L ++ +++ + + MP
Sbjct: 682 DRGVQPDSCTHSALLKQLGKDCKLQAVHGT-STMP 715
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 126/266 (47%), Gaps = 9/266 (3%)
Query: 114 YKHVIEAQELCFGENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEE 167
Y H I + LC S L EM + + YN ++RG+ + K E E
Sbjct: 143 YNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANE 202
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M G L ++ I +D CK+GK +A+ KEMK G++ D+V Y ++IR
Sbjct: 203 MKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGE 262
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
+D ++ E+ E G P +T NT+I+ C+ G+++EA + M ++G P+V TY
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTG 322
Query: 288 FFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
L K +E L L + MIE P TY +++ K + G + + + M++
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRR 382
Query: 345 CSPDEFAYNALVDALIDKGMLDMARK 370
PD YN L+ L KG LD A K
Sbjct: 383 TRPDNITYNILLGGLCAKGDLDEASK 408
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 119/238 (50%), Gaps = 12/238 (5%)
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
+L + +M G M KRG ++++++I + +C++ + KAV L +EM++
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ DV +YNTVIR + ++ A+ + EM+ GC S+VT +I C+ G++ EA
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 268 AVLAEMPKKGCVPDVITYHCFFR----CLEKPREILGLFDRMIESGIRPKMDTYVMLLRK 323
L EM G D++ Y R C E R LFD ++E G P TY L+R
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGK-ALFDEVLERGDSPCAITYNTLIRG 291
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG-------MLDMARKYDEE 374
F + G L+ +++ M E G P+ + Y L+D L G +L++ + DEE
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEE 349
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 163/346 (47%), Gaps = 19/346 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+YN+VI + E + + L + MK + S + T+ I+ + A ++EAMG +
Sbjct: 179 SYNTVIRGFCEGKELEKALELANEMKGSGCSW-SLVTWGILIDAFCKAGKMDEAMGFLKE 237
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK---IYNMI 148
+ GL+ D V Y +L+ C+ + + L F ++E + YN +
Sbjct: 238 MKFMGLEADLVVYTSLIRGFCDCGELDRGKAL---------FDEVLERGDSPCAITYNTL 288
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+RG+ K+ + E +E M +RGV ++++Y+ +D +C GK +A++L M +K
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE 348
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ + V YN +I + V A+ + M++ +P +T N ++ LC G + EA
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASK 408
Query: 269 VLAEMPKKGCV--PDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRK 323
+L M K PDVI+Y+ L K + L ++D ++E T +LL
Sbjct: 409 LLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNS 468
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
+ G + +WK++ + + Y A++D GML++A+
Sbjct: 469 TLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAK 514
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 154/338 (45%), Gaps = 9/338 (2%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +ID L + + L++ M + PN T+ I+ + LV +A+
Sbjct: 319 TYTGLIDGLCGVGKTKEALQLLNLMIEKDEE-PNAVTYNIIINKLCKDGLVADAVEIVEL 377
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + + D ++Y L+ LC + EA +L + K+ ++ ++ YN ++ G
Sbjct: 378 MKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVIS----YNALIHG 433
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + + + ++ + ++ D + +I ++ K+G KA++L+K++ I +
Sbjct: 434 LCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRN 493
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
Y +I + ++ A + +MR QPSV N ++ LC+ G + +A+ +
Sbjct: 494 SDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFE 553
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM + PDV++++ K +I L M +G+ P + TY L+ +F + G
Sbjct: 554 EMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLG 613
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
+L + KM + G PD ++++ I +G D
Sbjct: 614 YLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETD 651
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 140/321 (43%), Gaps = 30/321 (9%)
Query: 6 CYANDWKRALEFFNW-VETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C K AL+ N +E D T YN +I+ L K + ++ MK +
Sbjct: 328 CGVGKTKEALQLLNLMIEKDEEPNAVT--YNIIINKLCKDGLVADAVEIVELMKKRRTR- 384
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-------VSYCNLVDALCEYKHV 117
P++ T+ I+ ++EA +KL LKD +SY L+ LC+ +
Sbjct: 385 PDNITYNILLGGLCAKGDLDEA----SKLLYLMLKDSSYTDPDVISYNALIHGLCKENRL 440
Query: 118 IEAQELCFGENKNVGFSGLVE---MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVV 174
+A ++ + LVE N++L K K E W+++ +V
Sbjct: 441 HQALDI---------YDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIV 491
Query: 175 KDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRV 234
++ +Y+ +D CK+G A L +M+ ++ V YN ++ ++ +D A R+
Sbjct: 492 RNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRL 551
Query: 235 YREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRC 291
+ EM+ P VV+ N +I + G ++ A ++L M + G PD+ TY F
Sbjct: 552 FEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLK 611
Query: 292 LEKPREILGLFDRMIESGIRP 312
L E + FD+M++SG P
Sbjct: 612 LGYLDEAISFFDKMVDSGFEP 632
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 3/189 (1%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A Y++M + ++ V+ + ++ FA V M + G +V N ++K
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRP 312
LC N +A ++L EM + +PDV +Y+ R + +E+ L L + M SG
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
+ T+ +L+ F + G + K+M+ +G D Y +L+ D G LD +
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 373 EEMFAKGLS 381
+E+ +G S
Sbjct: 271 DEVLERGDS 279
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 120/296 (40%), Gaps = 27/296 (9%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHT-TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C D A + + D +T +YN++I L K + ++ + + +
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA- 456
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKL-DEFGLKDEVSYCNLVDALCEYKHVIEAQEL 123
+ T I+ + A VN+AM + ++ D +++ +Y ++D C+ +
Sbjct: 457 GDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGML------ 510
Query: 124 CFGENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
NV L +M +++ YN +L K + +EEM + D+
Sbjct: 511 ------NVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDV 564
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
S++I +D K+G A L M + G+ D+ Y+ +I +D A+ + +
Sbjct: 565 VSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDK 624
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD------VITYHC 287
M + G +P C++V+K G + ++ ++ K V D V+ Y C
Sbjct: 625 MVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 87/201 (43%), Gaps = 6/201 (2%)
Query: 187 MCKSGKPW--KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+C+ P AV ++++ G + N + + V S + A YR+M E
Sbjct: 46 LCEDSNPQLKNAVSVFQQAVDSGSSLAFAGNNLMAKLVR-SRNHELAFSFYRKMLETDTF 104
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE---ILGL 301
+ V+ + +++ + + A+ VLA M K+G +V ++ + L + E + L
Sbjct: 105 INFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSL 164
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
M + + P + +Y ++R F L + +M+ GCS + L+DA
Sbjct: 165 LREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCK 224
Query: 362 KGMLDMARKYDEEMFAKGLSA 382
G +D A + +EM GL A
Sbjct: 225 AGKMDEAMGFLKEMKFMGLEA 245
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 166/407 (40%), Gaps = 40/407 (9%)
Query: 10 DWKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
D + AL N + D T + D Y +I LG FDL L+ M+ +
Sbjct: 68 DPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEV-GLG 126
Query: 69 TFRIMFKRYVTAHLVNEAMGTF-NKLDEFGLKDEVS-YCNLVDALCE------------- 113
+ Y L ++A N+LD FG++ Y +L+ L E
Sbjct: 127 LVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTE 186
Query: 114 ------------YKHVIEAQELCFGENKNVGFSGLVEMNKTKI------YNMILRGWFKM 155
+ VI+A LC L EM+ + + ++ G+ +
Sbjct: 187 MSSQGIEPDVVTFNTVIDA--LCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEE 244
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
M + G + ++ ++ CK G+ A+ ++ G + D V +
Sbjct: 245 GSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTF 304
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
+T + + + VD A++V M + GC+P V T +TVI LC NG + EA ++ +M
Sbjct: 305 STFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVD 364
Query: 276 KGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
GC+PD T++ L + E L L + G+ P + T+ +L+ + G
Sbjct: 365 SGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHL 424
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++++M+ GC+PDE YN L+D L G L A +EM G
Sbjct: 425 AVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSG 471
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 174/414 (42%), Gaps = 37/414 (8%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A + A+ + + C T+ ++++ + + + L RM + S P
Sbjct: 207 CRARQARTAVLMLEEMSS-CDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCS-P 264
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA---- 120
T ++ Y V +A+G + G + D V++ V+ LC+ HV A
Sbjct: 265 TSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVL 324
Query: 121 ----QELC-------------------FGENKNVGFSGLVE---MNKTKIYNMILRGWFK 154
QE C E K + + +V+ + T +N ++
Sbjct: 325 GLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGI-VNQMVDSGCLPDTTTFNTLIVALCT 383
Query: 155 MSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVA 214
+ + + E+ +G+ ++++++I ++ +CK G P AV+L++EMK G D V
Sbjct: 384 ENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVT 443
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
YN +I + S + A+ + +EM GC S VT NT+I LC+ R+ EA V +M
Sbjct: 444 YNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMD 503
Query: 275 KKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
G + IT++ L E+ + L D+MI G++P TY +L + + G +
Sbjct: 504 VTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNIS 563
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
+ + M G D Y L++ L A K M KG+ P+
Sbjct: 564 KAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPK 617
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 154/335 (45%), Gaps = 11/335 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY++VI+ L E + + ++++M D+ +P+ TF + T + + EA+ +
Sbjct: 338 TYSTVINCLCNNGELEEAKGIVNQMVDS-GCLPDTTTFNTLIVALCTENQLEEALDLARE 396
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
L GL V N L++ALC+ A L F E K+ G + YN+++
Sbjct: 397 LTVKGLSPNVYTFNILINALCKVGDPHLAVRL-FEEMKSSGCT-----PDEVTYNILIDN 450
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + +EM+ G + +Y+ +D +CK + +A +++ +M GI +
Sbjct: 451 LCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRN 510
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ +NT+I + +E +D A + +M G QP+ VT N+++ C+ G + +A +L
Sbjct: 511 AITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQ 570
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M G DV+TY L K R L L M G++P Y +++ R
Sbjct: 571 TMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGN 630
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
R ++++M E+G PD F Y + L G
Sbjct: 631 NGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGG 665
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 150/343 (43%), Gaps = 17/343 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C N + AL+ + T + T+N +I+ L K + L+ L MK + + P
Sbjct: 382 CTENQLEEALDLAREL-TVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCT-P 439
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ I+ ++ + +A+ +++ G + V+Y ++D LC+ + + EA+E+
Sbjct: 440 DEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEV- 498
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F + G +N ++ G E ++M G+ + +Y+ +
Sbjct: 499 FDQMDVTGIG-----RNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSIL 553
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
CK G KA + + M G ++DVV Y T+I + + A+++ R MR G +
Sbjct: 554 THYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMK 613
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP----REILG 300
P+ N VI+ L R+A ++ EM + G PD TY FR L + +E
Sbjct: 614 PTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFD 673
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWG----FLRPVFVVWKK 339
M ++G P+ ++ ML G +R + ++ +K
Sbjct: 674 FLVEMADNGFIPEFSSFRMLAEGLLNLGMDDYLIRAIELIVEK 716
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/208 (19%), Positives = 82/208 (39%), Gaps = 38/208 (18%)
Query: 179 SYSIYMDIMCKSGKPWKAVKLYK----EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRV 234
S +Y +I+ K G A L K EM+++G ++ + + I + + D A +
Sbjct: 89 SRDVYEEIIRKLGTAG-AFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAFDL 147
Query: 235 YREMREM-GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE 293
+M G Q + N ++ +L E +++ + EM +G PDV+T++ L
Sbjct: 148 VSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALC 207
Query: 294 KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
+ R+ R ++ ++M +PDE +
Sbjct: 208 RARQA--------------------------------RTAVLMLEEMSSCDVAPDETTFT 235
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGLS 381
L++ +++G ++ A + M G S
Sbjct: 236 TLMEGFVEEGSIEAALRLKARMSEMGCS 263
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 171/370 (46%), Gaps = 18/370 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS+ID L K E S ++ +M D PN+ T+ + Y TA + E++ F +
Sbjct: 194 TYNSLIDGLCKTKEMVKSERVLEQMVD-AGIRPNNKTYNSLIYGYSTAGMWKESVRVFKE 252
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI--YNMIL 149
+ GL V CN + ALC + + EA K++ S +++ K I Y+ +L
Sbjct: 253 MSSSGLIPCVVNCNSFIHALCRHNRIKEA--------KDIFDSMVLKGPKPNIISYSTLL 304
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G+ + M +G+V + ++I ++ + G KA+ ++++M+ KG+
Sbjct: 305 HGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMI 364
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
D V + TVI ++ +D A+ + M ++G PS +I+ C +G + +A +
Sbjct: 365 PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKEL 424
Query: 270 LAEMPKKGCVPDVITYHCFF--RCLEKPREILG--LFDRMIESGIRPKMDTYVMLLRKFG 325
++EM K P + Y ++ R G + D M+++G RP + T+ L+ +
Sbjct: 425 ISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYC 484
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
G + F + M +G P+ + Y LVD G +D A +M KG+ KP
Sbjct: 485 LVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGV--KPT 542
Query: 386 EELGTKLVQG 395
L ++ G
Sbjct: 543 SVLYNIILHG 552
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 123/257 (47%), Gaps = 11/257 (4%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G+ K K E + +M ++ V D+ +Y+ +D +CK+ + K+ ++ ++M
Sbjct: 160 YNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMV 219
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
GI+ + YN++I + ++RV++EM G P VV CN+ I LC + R++
Sbjct: 220 DAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIK 279
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFR------CLEKPREILGLFDRMIESGIRPKMDTYV 318
EA + M KG P++I+Y C ++ L M+ GI P +
Sbjct: 280 EAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNL---MVSKGIVPNHRFFN 336
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+L+ + R G + ++++ M+ G PD + ++ +L G LD A M
Sbjct: 337 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 396
Query: 379 GLSAKPREELGTKLVQG 395
G+ P E + L+QG
Sbjct: 397 GV--PPSEAVYRCLIQG 411
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 146/354 (41%), Gaps = 36/354 (10%)
Query: 53 LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDAL 111
LI N IP+ TF + +++A+ FN + + G+ E Y L+
Sbjct: 353 LIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGC 412
Query: 112 CEYKHVIEAQELCFGE--NKNVG------FSGLV-----------------------EMN 140
C + +++A+EL E NK++ FS ++ +
Sbjct: 413 CNHGELVKAKEL-ISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRP 471
Query: 141 KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
+N ++ G+ + + + M G+ + + Y +D CK+G+ A+ ++
Sbjct: 472 NVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVF 531
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
++M KG+K V YN ++ + + A +++ EM E G S+ T V+ LC N
Sbjct: 532 RDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRN 591
Query: 261 GRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTY 317
EA +L ++ D+IT++ + K +E LF + G+ P + TY
Sbjct: 592 NCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTY 651
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
+++ + ++ +E+ G +PD N +V L+ K + A Y
Sbjct: 652 NLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNY 705
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 108/262 (41%), Gaps = 44/262 (16%)
Query: 163 EFWEEMDK------RGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
E ++ MD+ +++Y+I +D + +P A+ ++ + + G+ DV +YN
Sbjct: 102 ELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYN 161
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN---------------- 260
T+I VD A ++ +M E P VVT N++I LC+
Sbjct: 162 TLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDA 221
Query: 261 -------------------GRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREI 298
G +E+ V EM G +P V+ + F L + +E
Sbjct: 222 GIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEA 281
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+FD M+ G +P + +Y LL + G + + M G P+ +N L++A
Sbjct: 282 KDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINA 341
Query: 359 LIDKGMLDMARKYDEEMFAKGL 380
GM+D A E+M KG+
Sbjct: 342 YARCGMMDKAMLIFEDMQNKGM 363
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 9/169 (5%)
Query: 221 AVGVSEGVDFAMRVYREMREMGC------QPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
+ S+G A+ +++ M C P++ T N +I R A AV +
Sbjct: 90 SAACSDGPALAVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLL 149
Query: 275 KKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
+ G PDV +Y+ K E+ LF +MIE + P + TY L+ + +
Sbjct: 150 RTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMV 209
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
V ++M + G P+ YN+L+ GM + + +EM + GL
Sbjct: 210 KSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGL 258
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 148/326 (45%), Gaps = 16/326 (4%)
Query: 60 NPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVI 118
N +P + + Y + A TF ++ +K D ++Y L++ LC+ + +
Sbjct: 368 NAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERIT 427
Query: 119 EAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
AQ+L E ++ G + VE +N ++ + + KC EM + G+ ++
Sbjct: 428 NAQDLLM-EMQDNGVNPTVE-----TFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVV 481
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
SY ++ CK+GK +AV + +M K + + YN +I A D A + +M
Sbjct: 482 SYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 541
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCL 292
+ G PS+VT N +IK LC ++ EA ++ + +PD ++Y+ C+ +
Sbjct: 542 KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNI 601
Query: 293 EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
+K L L RM + GI+ + TY L+ G G L + +++KM + P +
Sbjct: 602 DK---ALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIH 658
Query: 353 NALVDALIDKGMLDMARKYDEEMFAK 378
N +V+A G A +EM K
Sbjct: 659 NIMVEAYSKYGNEIKAEDLRKEMLQK 684
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 162/366 (44%), Gaps = 12/366 (3%)
Query: 25 CH-FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLV 83
CH TYN ++ L + + L+ M +P+ T+ I+F
Sbjct: 263 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQ-KMVPDGFTYSILFDGLSRNGDS 321
Query: 84 NEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKT 142
+ F K + G+ C+ L++ LC+ V A+E+ +++ +GLV
Sbjct: 322 KAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVL----QSLVNAGLVP--TR 375
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
IYN ++ G+ + + +M R + D +Y+ ++ +CK+ + A L E
Sbjct: 376 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 435
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M+ G+ V +NT+I A G + ++ V EM+E G +P+VV+ +++ C+NG+
Sbjct: 436 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 495
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCL--EKPR-EILGLFDRMIESGIRPKMDTYVM 319
+ EA A+L +M K +P+ Y+ P + L ++M +GI P + TY +
Sbjct: 496 IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNL 555
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L++ + + + PD +YN L+ A +G +D A + M G
Sbjct: 556 LIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 615
Query: 380 LSAKPR 385
+ + R
Sbjct: 616 IKSTVR 621
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 154/373 (41%), Gaps = 55/373 (14%)
Query: 53 LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDAL 111
++ RM + + PN ++ ++ A +A+ F+++ E L + ++Y ++D
Sbjct: 186 MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 245
Query: 112 C-----EYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE 166
E + Q +C G N YN++L G + G+ +
Sbjct: 246 IKGGDLEAGFRLRDQMVCHGLKPN-----------AITYNVLLSGLCRAGRMGETSALLD 294
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
EM + +V D +YSI D + ++G + L+ + K G+ + + ++ +
Sbjct: 295 EMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDG 354
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
V A V + + G P+ V NT+I C+ G + A++ +M + PD ITY+
Sbjct: 355 KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYN 414
Query: 287 CFFRCLEKPREILGLFDRMIE---SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
L K I D ++E +G+ P ++T+ L+ +GR G L F+V +M+E
Sbjct: 415 ALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQEN 474
Query: 344 GCSPDEFAY-----------------------------------NALVDALIDKGMLDMA 368
G P+ +Y NA++DA ++ G D A
Sbjct: 475 GLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQA 534
Query: 369 RKYDEEMFAKGLS 381
E+M + G+S
Sbjct: 535 FILVEKMKSNGIS 547
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 140/340 (41%), Gaps = 33/340 (9%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+PNH T+ M ++ + +++ GLK + ++Y L+ LC + E
Sbjct: 232 LPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSA 291
Query: 123 LCF----------GENKNVGFSGLVEMNKTKIY-------------------NMILRGWF 153
L G ++ F GL +K +++L G
Sbjct: 292 LLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLC 351
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
K E + + G+V Y+ ++ C++G+ A + +MK + IK D +
Sbjct: 352 KDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHI 411
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
YN +I + +E + A + EM++ G P+V T NT+I G++ + + VL+EM
Sbjct: 412 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 471
Query: 274 PKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
+ G P+V++Y K E + + D M + P Y ++ + G
Sbjct: 472 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPN 531
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
F++ +KM+ G SP YN L+ L ++ + A +
Sbjct: 532 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE 571
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 111/252 (44%), Gaps = 16/252 (6%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T +T+N++ID G+ + + + ++ M++N PN ++ + + + EA+
Sbjct: 444 TVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK-PNVVSYGSIVNAFCKNGKIPEAVAI 502
Query: 90 FNKLDEFGLKDEVS----YCNLVDALCEYKHVIEAQELCFGEN-KNVGFSGLVEMNKTKI 144
LD+ KD + Y ++DA E H Q E K+ G S +
Sbjct: 503 ---LDDMFHKDVLPNAQVYNAIIDAYVE--HGPNDQAFILVEKMKSNGISPSI-----VT 552
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN++++G S + E + ++ D SY+ + C G KA+ L + M
Sbjct: 553 YNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMH 612
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K GIK V Y+ +I +G + ++ +Y++M + PS N +++ + G
Sbjct: 613 KYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEI 672
Query: 265 EAYAVLAEMPKK 276
+A + EM +K
Sbjct: 673 KAEDLRKEMLQK 684
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 14/186 (7%)
Query: 229 DFAMRVYREMRE--MGCQPSVVTCNTVIKLLCENGR---VREAYAVLAEMPKKGCVPDVI 283
D A+R+ ++ + PS+ +CN +++ L GR VR A+ +LA G PD
Sbjct: 109 DGALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILA---SAGARPDTF 165
Query: 284 TYHCFFR-CLEKPR--EILGLFDRMIESGIRPKMD-TYVMLLRKFGRWGFLRPVFVVWKK 339
++ + C+ E +G+ RM G P +Y +++ R G V+ +
Sbjct: 166 AWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDE 225
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL--SAKPREELGTKLVQGGL 397
M E P+ YN ++D I G L+ + ++M GL +A L + L + G
Sbjct: 226 MTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGR 285
Query: 398 DGEQSG 403
GE S
Sbjct: 286 MGETSA 291
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 158/321 (49%), Gaps = 21/321 (6%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEA----QEL 123
T+ ++ ++EA G F++L E GL + +Y +L+ C+ +V +A +E+
Sbjct: 602 TYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEM 661
Query: 124 CF-GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
C G N ++ YN+++ G K + + +++++ RG+ + +Y+
Sbjct: 662 CIKGINPDI-----------VTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAA 710
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D CKS P A +L +EM +G+ D YN ++ E + A+ +++EM E G
Sbjct: 711 MVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG 770
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EIL 299
S V+ NT+I+ C++G+++EA +L EM +K +P+ +TY K E
Sbjct: 771 F-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAK 829
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
L+ M E + P TY LL + G + V ++++M G PD+ Y ++DA
Sbjct: 830 RLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAY 889
Query: 360 IDKGMLDMARKYDEEMFAKGL 380
+G + A K +E+ KG+
Sbjct: 890 CREGNVMEACKLKDEILVKGM 910
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 168/387 (43%), Gaps = 24/387 (6%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + RA E + ++ T TY+ +I+ L + + ++ M N P
Sbjct: 401 CRGQNMARAFELLDEMKKR-KLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLK-P 458
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELC 124
N + + + V E+ ++ E G L D Y +L+ C+ K + EA+
Sbjct: 459 NAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEAR--- 515
Query: 125 FGENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
+ L+EM + ++ Y + G+ K ++ EM GV+ ++
Sbjct: 516 ---------TYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVG 566
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
Y+ ++ CK G +A +++ + + + DV Y+ +I + + + A ++ E+
Sbjct: 567 IYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSEL 626
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI 298
+E G P+ T N++I C+ G V +A +L EM KG PD++TY+ L K EI
Sbjct: 627 QEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEI 686
Query: 299 ---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
LFD + G+ P TY ++ + + F + ++M G PD F YN +
Sbjct: 687 ERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVI 746
Query: 356 VDALIDKGMLDMARKYDEEMFAKGLSA 382
++ + + A +EM KG ++
Sbjct: 747 LNFCCKEEKFEKALDLFQEMLEKGFAS 773
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 151/338 (44%), Gaps = 17/338 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN +I L + D + L M D +P+ T+ I+ + EA +
Sbjct: 252 TYNVIIGGLCRARLLDEAIELKRSMVDK-GLVPDLYTYDILINGFCMEKRSREAKLMLLE 310
Query: 93 LDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + GLK E ++Y L+D + +A + K+ + +E N I+N +L G
Sbjct: 311 MIDVGLKPEPITYNALIDGFMRQGDIEQAFRI-----KDEMVACGIEANLI-IWNTLLNG 364
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K K E +EM ++GV D +YS+ ++ C+ +A +L EMKK+ +
Sbjct: 365 VCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPT 424
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V+ Y+ +I + + + REM G +P+ V T++ + GRV E+ +L
Sbjct: 425 VLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILE 484
Query: 272 EMPKKGCVPDVITYH------CFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
M ++G +PDV Y+ C + +E+ R L M+E +RP TY + +
Sbjct: 485 RMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLM---EMLERRLRPNAHTYGAFIDGYS 541
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
+ G + + +M G P+ Y AL++ +G
Sbjct: 542 KAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEG 579
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 5/207 (2%)
Query: 198 KLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLL 257
K++ M + DV Y +I A V A RV EM E GC P++VT N +I L
Sbjct: 201 KVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGL 260
Query: 258 CENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEK-PREILGLFDRMIESGIRPKM 314
C + EA + M KG VPD+ TY C+EK RE + MI+ G++P+
Sbjct: 261 CRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEP 320
Query: 315 DTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
TY L+ F R G + F + +M G + +N L++ + G ++ A + +E
Sbjct: 321 ITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQE 380
Query: 375 MFAKGLSAKPREELGTKLVQGGLDGEQ 401
M KG+ +P + + L++G G+
Sbjct: 381 MMEKGV--EPDSQTYSLLIEGHCRGQN 405
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 6/205 (2%)
Query: 160 KCREFWEEMD---KRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
K FW+ D V+ D+++Y+ + CK G A ++ EM +KG ++V YN
Sbjct: 195 KVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYN 254
Query: 217 TVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
+I + + +D A+ + R M + G P + T + +I C R REA +L EM
Sbjct: 255 VIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDV 314
Query: 277 GCVPDVITYHCFFRCLEKPREILGLF---DRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
G P+ ITY+ + +I F D M+ GI + + LL + G +
Sbjct: 315 GLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKA 374
Query: 334 FVVWKKMEELGCSPDEFAYNALVDA 358
+ ++M E G PD Y+ L++
Sbjct: 375 LEIMQEMMEKGVEPDSQTYSLLIEG 399
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 123/296 (41%), Gaps = 40/296 (13%)
Query: 98 LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSW 157
L D +Y N++ A C+ +V +A+ + + LV YN+I+ G +
Sbjct: 212 LPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLV------TYNVIIGGLCRARL 265
Query: 158 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
+ E M +G+V DL++Y I ++ C + +A + EM G+K + + YN
Sbjct: 266 LDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNA 325
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
+I ++ A R+ EM G + +++ NT++ +C+ G++ +A ++ EM
Sbjct: 326 LIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM---- 381
Query: 278 CVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVW 337
+E G+ P TY +L+ R + F +
Sbjct: 382 ----------------------------MEKGVEPDSQTYSLLIEGHCRGQNMARAFELL 413
Query: 338 KKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLV 393
+M++ +P Y+ +++ L G L EM GL KP + T L+
Sbjct: 414 DEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGL--KPNAVVYTTLM 467
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 141/333 (42%), Gaps = 18/333 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN +ID L K E + + NL ++ + PN T+ M Y + F
Sbjct: 672 TYNILIDGLCKAGEIERAKNLFDDIEGRGLT-PNCVTYAAMVDGYCKSK---NPTAAFQL 727
Query: 93 LDEFGLK----DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
L+E L+ D Y +++ C+ + +A +L F E GF+ V +N +
Sbjct: 728 LEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDL-FQEMLEKGFASTVS------FNTL 780
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G+ K + EEM ++ + + +Y+ +D CK+G +A +L+ EM+++ +
Sbjct: 781 IEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNV 840
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
Y +++ + ++ EM G +P +T +I C G V EA
Sbjct: 841 MPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACK 900
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ E+ KG V Y + L K E+L L + + ESG R + T ++ R F
Sbjct: 901 LKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQ 960
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
G + V + M + G + + LVD
Sbjct: 961 IAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 993
>gi|413926076|gb|AFW66008.1| hypothetical protein ZEAMMB73_411794 [Zea mays]
Length = 633
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 149/356 (41%), Gaps = 57/356 (16%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN+VI+ LGK D + ++ +M ++ PN T+ IM T G ++L
Sbjct: 291 YNTVIEALGKNKMVDEAIFMLSKMIESDCR-PNQFTYSIMLDVLSTG-------GQLHRL 342
Query: 94 DEF-----GLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
+E G + Y L+ ALC+ H EA +
Sbjct: 343 NEILDICSGCLNRPVYSYLIKALCKSGHASEAHSVF------------------------ 378
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
CR W +K D +++ ++ +C + K +A+ L M +KGI
Sbjct: 379 ------------CR-MWNSHEK----GDRYAFVSMLEALCNAEKTTEAIDLLHMMPEKGI 421
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
DV YN + A+G + V F +Y MR G P V T N +I G V +A
Sbjct: 422 TTDVGMYNMIFSALGKLKQVSFMSSLYDTMRANGVVPDVFTYNIMISSFGRVGLVDKASE 481
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ EM C PDV+TY+ CL K E LF M E G P + TY +L+ FG
Sbjct: 482 LFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFG 541
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ + ++ +M GC P+ YN L+D L +G A K+ E + +GL+
Sbjct: 542 KSNKVDMACSLFDEMVAQGCIPNIVTYNILLDCLERRGKTTEAHKFYETLKQQGLT 597
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 136/305 (44%), Gaps = 70/305 (22%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YNM+L K + + +E+M + D ++Y+I + + K+GK K V L +EM
Sbjct: 221 YNMLLNALAKAGMVDQAYQVFEDMKQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEMV 280
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT------------ 252
+G ++++AYNTVI A+G ++ VD A+ + +M E C+P+ T +
Sbjct: 281 SEGCVLNLIAYNTVIEALGKNKMVDEAIFMLSKMIESDCRPNQFTYSIMLDVLSTGGQLH 340
Query: 253 --------------------VIKLLCENGRVREAYAV----------------------- 269
+IK LC++G EA++V
Sbjct: 341 RLNEILDICSGCLNRPVYSYLIKALCKSGHASEAHSVFCRMWNSHEKGDRYAFVSMLEAL 400
Query: 270 ------------LAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKM 314
L MP+KG DV Y+ F L K +++ L+D M +G+ P +
Sbjct: 401 CNAEKTTEAIDLLHMMPEKGITTDVGMYNMIFSALGKLKQVSFMSSLYDTMRANGVVPDV 460
Query: 315 DTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
TY +++ FGR G + ++++ME+ C PD YN++++ L G LD A ++
Sbjct: 461 FTYNIMISSFGRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHMLFKD 520
Query: 375 MFAKG 379
M KG
Sbjct: 521 MQEKG 525
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 94/175 (53%), Gaps = 6/175 (3%)
Query: 159 GKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTV 218
G+C + K G+ + ++Y + +S + WK ++Y++M++KG K+D+ AYN +
Sbjct: 168 GRCLDLAS---KWGLRLNGYTYKCLVQAHLRSREVWKGFEVYEKMRRKGYKLDIFAYNML 224
Query: 219 IRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGC 278
+ A+ + VD A +V+ +M++ C P T +I++ + G+ + ++L EM +GC
Sbjct: 225 LNALAKAGMVDQAYQVFEDMKQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEMVSEGC 284
Query: 279 VPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
V ++I Y+ L K + E + + +MIES RP TY ++L G L
Sbjct: 285 VLNLIAYNTVIEALGKNKMVDEAIFMLSKMIESDCRPNQFTYSIMLDVLSTGGQL 339
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 12/178 (6%)
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFA--MRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
G + D +YN ++ + S D A MR+ EM G ++ T N ++ + E GR
Sbjct: 113 GFRHDAFSYNRIL-VLLFSNRADPAEAMRLIAEMERDGVPGNISTVNLLVGMGVEVGRCL 171
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
+ + K G + TY C + + RE+ ++++M G + + Y MLL
Sbjct: 172 DLAS------KWGLRLNGYTYKCLVQAHLRSREVWKGFEVYEKMRRKGYKLDIFAYNMLL 225
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ G + + V++ M++ C PD + Y L+ G EEM ++G
Sbjct: 226 NALAKAGMVDQAYQVFEDMKQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEMVSEG 283
>gi|296087160|emb|CBI33534.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 181/393 (46%), Gaps = 19/393 (4%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A++FF W + H+ ++N V+D+LGK F FD W+ + MK + + ATF +
Sbjct: 108 AVKFFRWSGHQLNDNHSPYSWNLVVDMLGKNFLFDAMWDAVKSMKKQ--GLLSLATFASI 165
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
F YV A V EA+ TF+ ++++G +D V+ +L+ A+C ++A E +NV
Sbjct: 166 FSSYVIADRVREAIMTFDVMEQYGCPRDIVALNSLLSAICRDGRTVQAAEFL----RNV- 220
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEE--MDKRGVVKDLHSYSIYMDIMCKS 190
GL+ + Y ++L GW G R+ ++E MD ++ +Y +++ +
Sbjct: 221 -RGLIRPD-ADTYAILLEGWESEGNCGAARQTFDEMVMDIGWDPGNVSAYDSFLNALLHG 278
Query: 191 GKPWK-AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG-CQPSVV 248
+ A+K ++ M+ + + Y ++ + A +++ M C+P
Sbjct: 279 PDGRREAMKFFEIMRDRQCSPGMRFYRIGLQECVKTSDSKGAQLLWQTMLSRNICRPDTE 338
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRM 305
N++I L C + A +L EM G PD TY+ FR L + R E +F M
Sbjct: 339 MYNSMIALHCSCDNIVMARGMLDEMVCNGAFPDSETYNVLFRFLIRRRKLEEAFSIFSEM 398
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
+++ P + +R + G + VWK + E S E N LV L D +
Sbjct: 399 VQNECVPDLTNCNAAVRIYLDLGDVYKAIKVWKYIIENHDSGLEETGNLLVTGLRDHDRI 458
Query: 366 DMARKYDEEMFAKG--LSAKPREELGTKLVQGG 396
A KY ++M +G L++ +L LV+ G
Sbjct: 459 PEAVKYAKDMIVRGIKLTSSTLSKLKHALVEVG 491
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 164/372 (44%), Gaps = 12/372 (3%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
ALE F ++ D ++ Y S+I IL + FD L M+ N T+ +M
Sbjct: 196 ALELFESLKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQRE-GQRGNAVTYNVM 254
Query: 74 FKRY-VTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNV 131
Y + F ++ + + D+ +Y ++ A + H EA L F E K
Sbjct: 255 LDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRL-FQEMKEA 313
Query: 132 GFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
G N+ YN +L + K + E EM+ G+ ++ +Y+ + ++G
Sbjct: 314 GCCP----NRV-TYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAG 368
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCN 251
+A L K + KG+ D Y T+I A +E + A+ + EMR+ C P++VT N
Sbjct: 369 LCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYN 428
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIES 308
+I + ++ + V M +K C PD++T++ + E+ +F M +
Sbjct: 429 ILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRA 488
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G P +DT+ +L+ +GR G++ ++K + G P + AL+ +L +G
Sbjct: 489 GYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQC 548
Query: 369 RKYDEEMFAKGL 380
K +EM GL
Sbjct: 549 EKVSQEMAEAGL 560
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 160/354 (45%), Gaps = 24/354 (6%)
Query: 33 TYNSVIDILGKFFE-FDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
TYN ++D+ GK + +D +L MKD S P+ T+ M + EA+ F
Sbjct: 250 TYNVMLDLYGKRGDSWDRIQSLFQEMKDLEIS-PDDYTYNTMITACIQNSHCQEALRLFQ 308
Query: 92 KLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI------ 144
++ E G + V+Y L+D + EA EL LVEM I
Sbjct: 309 EMKEAGCCPNRVTYNALLDVYGKGGMHKEASEL------------LVEMEAAGISPNIVT 356
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ + + + + + +G+ D +Y + ++ + KA++ + EM+
Sbjct: 357 YNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMR 416
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K ++V YN +I G E +D M+V++ M+E C P +VT N+++K G +
Sbjct: 417 KTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLT 476
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
E V EM + G +P V T++ C + + + ++ ++ +G++P + T+ L+
Sbjct: 477 EVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALM 536
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
R G + V ++M E G + + L+ + + G RKY +E+
Sbjct: 537 ASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDEL 590
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 163/399 (40%), Gaps = 64/399 (16%)
Query: 8 ANDWKRALEFFNWV-ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPN 66
A +++ALE F + +T+C T TYN +IDI G+ + D + M++ + P+
Sbjct: 402 AERYEKALETFTEMRKTNC--TPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEK-NCTPD 458
Query: 67 HATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFG 126
T+ + K + ++ E F ++ G V N++ IE C+G
Sbjct: 459 LVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNIL---------IE----CYG 505
Query: 127 ENKNVGFS-----GLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGV-VKD- 176
V +S GL+ + ++ + W +C + +EM + G+ + D
Sbjct: 506 RCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDA 565
Query: 177 -----LHSYS---------IYMDIM--------------------CKSGKPWKAVKLYKE 202
+HSY+ Y+D + CK G +A +
Sbjct: 566 CHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCGMDNEAQLALNQ 625
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
+ G D+ +N +I ++ A+++ E+R+ +P VT N ++ + G
Sbjct: 626 LYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGM 685
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVM 319
+A V++EM + G P++ITY+ K + +F M+ + +RP T+
Sbjct: 686 YYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNT 745
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
L+ + G + V + M E GC P + + AL+D
Sbjct: 746 LVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDG 784
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 157/393 (39%), Gaps = 59/393 (15%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN+++D+ GK + L+ M+ S PN T+ + Y A L +EA
Sbjct: 321 TYNALLDVYGKGGMHKEASELLVEMEAAGIS-PNIVTYNELIAAYARAGLCDEAAALKKS 379
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK------IY 145
L GL DE +YC L+ A + +A E EM KT Y
Sbjct: 380 LLSKGLCPDEFTYCTLISAFNRAERYEKALET------------FTEMRKTNCTPNIVTY 427
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N+++ + +M + ++ M ++ DL +++ + G + +++EMK+
Sbjct: 428 NILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKR 487
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G V +N +I G VD+++ +Y+ + G QP+V T ++ L GR ++
Sbjct: 488 AGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQ 547
Query: 266 AYAVLAEMPKKG------CVPDVITYHC----FFRC------LEKP--REILGLF----- 302
V EM + G C +I + FF+ LEK + + G+
Sbjct: 548 CEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFV 607
Query: 303 ----------------DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
+++ ++G P + + ++ + G++ + +++ +
Sbjct: 608 LAYCKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLK 667
Query: 347 PDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
PD YN L+ +GM A + EM G
Sbjct: 668 PDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAG 700
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 94/205 (45%), Gaps = 6/205 (2%)
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKG-IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE- 240
++ + + GK KA+++++ ++K K+ VA +++ +G E + A+ ++ +++
Sbjct: 147 FVKALGRQGKWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQD 206
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE--- 297
V ++I +L R E + M ++G + +TY+ K +
Sbjct: 207 ESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWD 266
Query: 298 -ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
I LF M + I P TY ++ + + ++++M+E GC P+ YNAL+
Sbjct: 267 RIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALL 326
Query: 357 DALIDKGMLDMARKYDEEMFAKGLS 381
D GM A + EM A G+S
Sbjct: 327 DVYGKGGMHKEASELLVEMEAAGIS 351
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 164/375 (43%), Gaps = 47/375 (12%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ + Y ++ A FN++ G + +EV+Y +L+ LC + + EA +L
Sbjct: 251 PDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDL 310
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ F + + Y ++++ + +EM++ G+ ++H+Y++
Sbjct: 311 FVKMKDDECFPTV------RTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIR----------AVGVSE------- 226
+D +C K KA +L +M +KG+ +V+ YN +I AV V E
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 227 -----------------GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
V AM V +M E P VVT N++I C +G AY +
Sbjct: 425 SPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
L+ M +G VPD TY L K + E LFD + + G+ P + Y L+ + +
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPRE 386
G + ++ +KM C P+ +NAL+ L G L A +E+M GL +P
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL--QPTV 602
Query: 387 ELGTKLVQGGL-DGE 400
T L+ L DG+
Sbjct: 603 STDTILIHRLLKDGD 617
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/470 (24%), Positives = 192/470 (40%), Gaps = 78/470 (16%)
Query: 6 CYANDWKRALEFFNWVETD-CHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C D A + FN + C Y +I L D + +L +MKD+
Sbjct: 264 CQRKDLDSAFKVFNEMPLKGCRRNEVA--YTHLIHGLCVARRIDEAMDLFVKMKDD-ECF 320
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
P T+ ++ K + +EA+ +++E G+K + +Y L+D+LC +A+EL
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 124 CFGENKNVGF----------------SGLVE--------------MNKTKIYNMILRGWF 153
G+ G G++E T+ YN +++G+
Sbjct: 381 -LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC 439
Query: 154 KMSWW--------------------------GKCRE--------FWEEMDKRGVVKDLHS 179
K + G+CR M+ RG+V D +
Sbjct: 440 KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y+ +D +CKS + +A L+ +++KG+ +VV Y +I + VD A + +M
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI- 298
C P+ +T N +I LC +G+++EA + +M K G P V T L K +
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Query: 299 --LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
F +M+ SG +P TY ++ + R G L + KM E G SPD F Y++L+
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Query: 357 DALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLD---GEQSG 403
D G + A + M G +P + L++ L+ G+Q G
Sbjct: 680 KGYGDLGQTNFAFDVLKRMRDTG--CEPSQHTFLSLIKHLLEMKYGKQKG 727
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 167/362 (46%), Gaps = 43/362 (11%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D K AL F +W+ + + H+ +Y S++ +L + + + M + S+ +
Sbjct: 102 DPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGD--- 158
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV---SYCNLVDALCEYKHVIEAQELCFG 126
A V + NK + F LK ++ Y L+++L + V E +++
Sbjct: 159 ----------ALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQV--- 205
Query: 127 ENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
+EM + K+ YN ++ G+ K+ + ++ ++ + G+ D +Y
Sbjct: 206 ---------YMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTY 256
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ + C+ A K++ EM KG + + VAY +I + V+ +D AM ++ +M++
Sbjct: 257 TSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKD 316
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL------EK 294
C P+V T +IK LC + R EA ++ EM + G P++ TY L EK
Sbjct: 317 DECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEK 376
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
RE+LG +M+E G+ P + TY L+ + + G + V + ME SP+ YN
Sbjct: 377 ARELLG---QMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNE 433
Query: 355 LV 356
L+
Sbjct: 434 LI 435
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 159/383 (41%), Gaps = 56/383 (14%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS+ID + FD ++ L+ M D +P+ T+ M + V EA F+
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDR-GLVPDQWTYTSMIDSLCKSKRVEEACDLFDS 522
Query: 93 LDEFGLKDEVS-YCNLVDALCEYKHVIEA------------------------------- 120
L++ G+ V Y L+D C+ V EA
Sbjct: 523 LEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGK 582
Query: 121 -QELCFGENK--NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
+E E K +G V + I+ ++ G F ++ +++M G D
Sbjct: 583 LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY-----SRFQQMLSSGTKPDA 637
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
H+Y+ ++ C+ G+ A + +M++ G+ D+ Y+++I+ G +FA V +
Sbjct: 638 HTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR 697
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
MR+ GC+PS T ++IK L E + +KG P++ C + +
Sbjct: 698 MRDTGCEPSQHTFLSLIKHLLE----------MKYGKQKGSEPEL----CAMSNMMEFDT 743
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKME-ELGCSPDEFAYNALV 356
++ L ++M+E + P +Y L+ G LR V+ M+ G SP E +NAL+
Sbjct: 744 VVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALL 803
Query: 357 DALIDKGMLDMARKYDEEMFAKG 379
+ A K ++M G
Sbjct: 804 SCCCKLKKHNEAAKVVDDMICVG 826
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 69/167 (41%), Gaps = 38/167 (22%)
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
K+ + YNT++ ++ VD +VY EM E P++ T N ++ C+ G V EA
Sbjct: 180 KLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQ 239
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
++ +++E+G+ P TY L+ + +
Sbjct: 240 YVS--------------------------------KIVEAGLDPDFFTYTSLIMGYCQRK 267
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
L F V+ +M GC +E AY L+ L +AR+ DE M
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLC------VARRIDEAM 308
>gi|297743170|emb|CBI36037.3| unnamed protein product [Vitis vinifera]
Length = 646
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 153/327 (46%), Gaps = 40/327 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +I + GK + D S L M + + PN + M + +V++ + F+K
Sbjct: 297 TYTIMIRMTGKIGKADESLTLFQEMTEKGYT-PNLIAYNTMIQALANNRMVDKTIFLFSK 355
Query: 93 L-----DEFGLKDEVSYCNLVDALCEYKHVIEA-----------------------QELC 124
+ ++F K +Y LV L + H EA + LC
Sbjct: 356 MVVEVSNKFMNKSIYAY--LVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYMSMLESLC 413
Query: 125 FGENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
L ++++ +I YN +L K+ + +E+M + G D+
Sbjct: 414 DAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIF 473
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
SY+I + ++G+ +AVK+++E++ K D++++N++I +G + +D A ++EM
Sbjct: 474 SYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEM 533
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP--- 295
RE G P VVT +T+I+ + +V A + EM +GC P+++TY+ CLE+
Sbjct: 534 REEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRT 593
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLR 322
E + L+ ++ + G+ P TY +L R
Sbjct: 594 AEAVDLYAKLKQQGLTPDSITYAVLER 620
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 160/352 (45%), Gaps = 9/352 (2%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN ++D L K + D + + MK P+ T+ IM + +E++ F ++
Sbjct: 263 YNMLLDALAKDNKVDQVYMVFKDMKRKHCE-PDEYTYTIMIRMTGKIGKADESLTLFQEM 321
Query: 94 DEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
E G + ++Y ++ AL + V + F +K V MNK+ IY ++R
Sbjct: 322 TEKGYTPNLIAYNTMIQALANNRMV---DKTIFLFSKMVVEVSNKFMNKS-IYAYLVRTL 377
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K+ + + M D +Y ++ +C +GK +A+ L ++ +K I D
Sbjct: 378 SKLGHASEAHRLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDT 437
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V YNTV+ A+G + +Y +M++ G P + + N +I GRV EA + E
Sbjct: 438 VMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEE 497
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREILGL---FDRMIESGIRPKMDTYVMLLRKFGRWGF 329
+ C PD+I+++ CL K +I F M E G+ P + TY L+ FG+
Sbjct: 498 LENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDK 557
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ ++ +M GCSP+ YN L+D L G A ++ +GL+
Sbjct: 558 VEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLT 609
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 197/439 (44%), Gaps = 81/439 (18%)
Query: 2 ETLSCYANDWKRALEFFNWVETDC-HFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDN 60
E L C N +LEFF + ++ F H + TYN ++ IL K
Sbjct: 123 EILKCL-NHPHLSLEFFRFCSSNIPKFQHNSFTYNRLLVILSK----------------- 164
Query: 61 PSSIPNHATFRIMFKRYVTAHL----VNEAMGTFNKL-DEFGLKDEVSYC-------NLV 108
PS++ + + R+ R + + V ++ T N L FG +V C +L
Sbjct: 165 PSALRD--SERLDLIRAILDDMERCGVRGSISTINILIGIFGGGADVERCFDLVKKWDLQ 222
Query: 109 DALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK------IYNMILRGWFKMSWWGKCR 162
YK +++A N N F VE+ + YNM+L K + +
Sbjct: 223 MNCYTYKCLLQAH--LRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKVDQVY 280
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+++M ++ D ++Y+I + + K GK +++ L++EM +KG +++AYNT+I+A+
Sbjct: 281 MVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQAL 340
Query: 223 GVSEGVDFAMRVY---------------------REMREMG--CQPSVVTCN-------- 251
+ VD + ++ R + ++G + + CN
Sbjct: 341 ANNRMVDKTIFLFSKMVVEVSNKFMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEG 400
Query: 252 ------TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLF 302
++++ LC+ G+ EA +L+++ +K D + Y+ L +K ++ L+
Sbjct: 401 DRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLY 460
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
++M + G P + +Y +L+ FGR G + +++++E C PD ++N+L++ L
Sbjct: 461 EKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKN 520
Query: 363 GMLDMARKYDEEMFAKGLS 381
G +D A +EM +GLS
Sbjct: 521 GDIDEAHMRFKEMREEGLS 539
>gi|222625312|gb|EEE59444.1| hypothetical protein OsJ_11623 [Oryza sativa Japonica Group]
Length = 589
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 118/244 (48%), Gaps = 3/244 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y +L GW +M + + M V D+ ++ + G+ A +L +EM+
Sbjct: 186 YTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREME 245
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
++G + V+Y T+++ +G VD AMRV+ EMR GC P VT T++ C+ GR+
Sbjct: 246 RRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTYGTLVTAFCKAGRIS 305
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
+ Y L M ++G D Y FF EK ++ L L +RM E P + Y +++
Sbjct: 306 QGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQLEECLELMERMRECRCPPDLSIYNVVI 365
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
R + G + +W +ME SP + +V L+ +G+L A Y ++M +GL
Sbjct: 366 RLACKLGETKQAVALWNEMETNELSPGVDTFAIMVTGLVGQGVLVEACGYFKDMVGRGLF 425
Query: 382 AKPR 385
P+
Sbjct: 426 VAPQ 429
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 76/192 (39%), Gaps = 33/192 (17%)
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
K+G A +L +E++ + + + + Y ++ +D A V M+ P VV
Sbjct: 161 KTGHVAVAEQLVEELQPR-LPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVV 219
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIES 308
NT++ +GR +A+ + EM ++GC P+ ++Y
Sbjct: 220 VFNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSY----------------------- 256
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
L++ G G + V+ +M GC+PD Y LV A G +
Sbjct: 257 ---------TTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTYGTLVTAFCKAGRISQG 307
Query: 369 RKYDEEMFAKGL 380
++ + M +GL
Sbjct: 308 YEFLDVMAREGL 319
>gi|255660976|gb|ACU25657.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 376
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 144/302 (47%), Gaps = 9/302 (2%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELC 124
P+ + IM Y + + + + G + S+ ++ L + V E +
Sbjct: 23 PDAVVYNIMLNGYFRVAKIKDCFELWEMMGSEGNRSVSSFNTMMRGLFDNGKVDEVISIW 82
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
N+ SG VE ++T Y +++ G+ K + K E +++G V D +YS +
Sbjct: 83 ELMNE----SGFVEDSRT--YGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMI 136
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ +CK +AV + M K G K +V YNT+I + + + A+RV+REM M C
Sbjct: 137 NGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCS 196
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGL 301
P+++T NT+I C+N EAY ++ E+ KG P VITY CL+ K L L
Sbjct: 197 PTIITYNTLINGFCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMEGLCLDHKVARALQL 256
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
++++ G +P + + +L+R G ++ ++ M C+P+ ++N L++
Sbjct: 257 WNQVTSKGFKPDVQMHNILIRGLCSVGKMQLALSLYFDMNLWKCAPNLVSHNTLMEGFYK 316
Query: 362 KG 363
G
Sbjct: 317 DG 318
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 3/227 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+N ++RG F + WE M++ G V+D +Y I + CK+G K++ + + +
Sbjct: 62 FNTMMRGLFDNGKVDEVISIWELMNESGFVEDSRTYGILVHGFCKNGYIDKSLHVLEMAE 121
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+KG +D AY+ +I + +D A+ V M + GC+P+V NT+I L +
Sbjct: 122 QKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFE 181
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLL 321
+A V EM C P +ITY+ K + E L +++ G+ P + TY ML+
Sbjct: 182 DAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLVKELLDKGLDPGVITYSMLM 241
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
+ +W ++ G PD +N L+ L G + +A
Sbjct: 242 EGLCLDHKVARALQLWNQVTSKGFKPDVQMHNILIRGLCSVGKMQLA 288
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 81/142 (57%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G+ K +G+ +E+ +G+ + +YS+ M+ +C K +A++L+ ++
Sbjct: 202 YNTLINGFCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMEGLCLDHKVARALQLWNQVT 261
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
KG K DV +N +IR + + A+ +Y +M C P++V+ NT+++ ++G +R
Sbjct: 262 SKGFKPDVQMHNILIRGLCSVGKMQLALSLYFDMNLWKCAPNLVSHNTLMEGFYKDGDIR 321
Query: 265 EAYAVLAEMPKKGCVPDVITYH 286
A + A + + G PD+I+Y+
Sbjct: 322 NALVIWARILRNGLEPDIISYN 343
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 93/240 (38%), Gaps = 39/240 (16%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+YN++L G+F+++ C E WE M G
Sbjct: 27 VYNIMLNGYFRVAKIKDCFELWEMMGSEG------------------------------- 55
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
V ++NT++R + + VD + ++ M E G T ++ C+NG +
Sbjct: 56 -----NRSVSSFNTMMRGLFDNGKVDEVISIWELMNESGFVEDSRTYGILVHGFCKNGYI 110
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVML 320
++ VL +KG V D Y L K + + + + MI+SG +P + Y L
Sbjct: 111 DKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTL 170
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ V+++M + CSP YN L++ M A +E+ KGL
Sbjct: 171 INGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLVKELLDKGL 230
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 6/174 (3%)
Query: 225 SEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
S +D A RVY+E+ E P V N ++ ++++ + + M +G V +
Sbjct: 3 SGDIDGAERVYKEIVESKVSPDAVVYNIMLNGYFRVAKIKDCFELWEMMGSEGN-RSVSS 61
Query: 285 YHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKME 341
++ R L K E++ +++ M ESG TY +L+ F + G++ V + E
Sbjct: 62 FNTMMRGLFDNGKVDEVISIWELMNESGFVEDSRTYGILVHGFCKNGYIDKSLHVLEMAE 121
Query: 342 ELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+ G D FAY+A+++ L + LD A M G KP + L+ G
Sbjct: 122 QKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSG--CKPNVHVYNTLING 173
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 108/248 (43%), Gaps = 8/248 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
Y+++I+ L K D + ++++ M + PN + + V A +A+ F +
Sbjct: 131 AYSAMINGLCKEANLDRAVSVLNGMIKSGCK-PNVHVYNTLINGLVGASKFEDAIRVFRE 189
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + +Y L++ C+ K EA L K + GL T Y+M++ G
Sbjct: 190 MGTMHCSPTIITYNTLINGFCKNKMFGEAYNLV----KELLDKGLDPGVIT--YSMLMEG 243
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + W ++ +G D+ ++I + +C GK A+ LY +M +
Sbjct: 244 LCLDHKVARALQLWNQVTSKGFKPDVQMHNILIRGLCSVGKMQLALSLYFDMNLWKCAPN 303
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+V++NT++ + A+ ++ + G +P +++ N ++ LC R+ +A L
Sbjct: 304 LVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAILFLD 363
Query: 272 EMPKKGCV 279
+ K V
Sbjct: 364 DAVTKKIV 371
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 87/202 (43%), Gaps = 9/202 (4%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A+ ++ A+ F + T H + T TYN++I+ K F ++NL+ + D P
Sbjct: 177 ASKFEDAIRVFREMGT-MHCSPTIITYNTLINGFCKNKMFGEAYNLVKELLDKGLD-PGV 234
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFG 126
T+ ++ + H V A+ +N++ G K +V N L+ LC + A L F
Sbjct: 235 ITYSMLMEGLCLDHKVARALQLWNQVTSKGFKPDVQMHNILIRGLCSVGKMQLALSLYFD 294
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
N LV +N ++ G++K W + + G+ D+ SY+I ++
Sbjct: 295 MNLWKCAPNLVS------HNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEG 348
Query: 187 MCKSGKPWKAVKLYKEMKKKGI 208
+C + A+ + K I
Sbjct: 349 LCSCNRISDAILFLDDAVTKKI 370
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 167/387 (43%), Gaps = 40/387 (10%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
+YN +++ L K + + L+ M S P+ T+ + Y A V E+
Sbjct: 47 SYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLK 106
Query: 92 KLDEFGLK-DEVSYCNLVDALCEYKH----------VIEA-------------QELCFGE 127
++ GL+ D + Y +V +LC+ +I A C +
Sbjct: 107 EVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREK 166
Query: 128 NKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
N + S L +M + + YN ++ G K + + E M G D+ +YS
Sbjct: 167 NLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYS 226
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
++ +CKSGK A ++ ++M+ +VV YNT++ + S +D A+ + +M
Sbjct: 227 SFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASS 286
Query: 242 -GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---RE 297
GC +VV +TV+ LC+ GR +EA +V+ M + GC PDV+TY L K E
Sbjct: 287 DGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEE 346
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG-----CSPDEFAY 352
+ M G +P TY L+ G L + ++M G C P Y
Sbjct: 347 AVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTY 406
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKG 379
NAL+ L G +D A K+ + M ++G
Sbjct: 407 NALIGGLCKAGRIDDALKFFQRMRSQG 433
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 137/282 (48%), Gaps = 8/282 (2%)
Query: 102 VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKC 161
VSY L++ LC+ + EA+EL +++ G Y+ +L G+ K +
Sbjct: 46 VSYNGLLEGLCKLERWHEAEELV----RDMISRGGRSTPDMVTYSTLLSGYCKAGKVEES 101
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
RE +E+ RG+ D Y+ + +CKS + +A++L +EM + G ++ +NT+I
Sbjct: 102 RELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISG 161
Query: 222 VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
+ ++ A + ++M G + VVT NT++ LC+ GR++EA +L M GC PD
Sbjct: 162 CCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPD 221
Query: 282 VITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWK 338
V+ Y F L K ++L + ++M +S P + TY +L + G + + +
Sbjct: 222 VVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMME 281
Query: 339 KMEEL-GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+M GC + Y+ +VD L G AR E M G
Sbjct: 282 QMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAG 323
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 121/236 (51%), Gaps = 5/236 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+N ++ G+ K G C E M R + ++ SY+ ++ +CK + +A +L ++M
Sbjct: 13 FNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMI 72
Query: 205 KKGIKM--DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
+G + D+V Y+T++ + V+ + + +E+ G +P + V+ LC++ R
Sbjct: 73 SRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSAR 132
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPREIL-GLFDRMIESGIRPKMDTYVM 319
+ EA +L EM + GC P +IT++ C EK E+ L +M SG++ + TY
Sbjct: 133 LGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNT 192
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
L+ + G L+ + ++M+ GC+PD AY++ V L G + A + E+M
Sbjct: 193 LMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQM 248
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 136/315 (43%), Gaps = 29/315 (9%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T T+N++I + +++ +L+ +M + + T+ + A + EA
Sbjct: 151 TLITFNTLISGCCREKNLEMADSLLQKMAASGVK-ADVVTYNTLMDGLCKAGRLQEAEQL 209
Query: 90 FNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK----- 143
++ G D V+Y + V LC+ V++A ++ L +M +
Sbjct: 210 LERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQV------------LEQMRDSHHDPNV 257
Query: 144 -IYNMILRGWFKMSWWGKCREFWEEM-DKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
YN IL G K E E+M G ++ YS +D +CK G+ +A + +
Sbjct: 258 VTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVME 317
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
M + G + DVV Y++++ + + ++ A+ REM GC+P+ VT +++ LC G
Sbjct: 318 AMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCG 377
Query: 262 RVREAYAVLAEM-----PKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPK 313
R+ EA ++ EM C P V TY+ L K I L F RM G P
Sbjct: 378 RLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPD 437
Query: 314 MDTYVMLLRKFGRWG 328
+Y ++ R G
Sbjct: 438 GVSYSTIVEGLARSG 452
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 122/286 (42%), Gaps = 55/286 (19%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDN---PSSIPNHATFRIMFK--RYVTAHLVNEAM 87
TYN+++D L K + L+ RMK + P + + + K + + AH V E M
Sbjct: 189 TYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQM 248
Query: 88 GTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
D + V+Y ++D LC+ + A E+ + + S +N Y+
Sbjct: 249 -----RDSHHDPNVVTYNTILDGLCKSGKIDTALEM----MEQMASSDGCGLNVVG-YST 298
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++ G K+ + R E M + G D+ +YS ++ +CK+GK +AV+ +EM +G
Sbjct: 299 VVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG 358
Query: 208 IKMDVVAY----------------------------------------NTVIRAVGVSEG 227
K + V Y N +I + +
Sbjct: 359 CKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGR 418
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
+D A++ ++ MR GC P V+ +T+++ L +GR +A +L+E+
Sbjct: 419 IDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 90/222 (40%), Gaps = 12/222 (5%)
Query: 24 DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLV 83
D H TYN+++D L K + D + ++ +M + N + +
Sbjct: 250 DSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRT 309
Query: 84 NEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKT 142
EA + G + D V+Y +LV+ LC+ + EA E + + G T
Sbjct: 310 QEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAV----REMAMEGCKPNAVT 365
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVV-----KDLHSYSIYMDIMCKSGKPWKAV 197
Y ++ G + EEM G + +Y+ + +CK+G+ A+
Sbjct: 366 --YCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDAL 423
Query: 198 KLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
K ++ M+ +G D V+Y+T++ + S A + E+R
Sbjct: 424 KFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 71/185 (38%), Gaps = 40/185 (21%)
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--C-LEK 294
M GC P+ VT N ++ + GR + +L M + P+V++Y+ C LE+
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 295 PREILGLFDRMIESGIR--PKMDTYVMLLRKFGRWG---------------FLRPVFVVW 337
E L MI G R P M TY LL + + G LRP +++
Sbjct: 61 WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 338 KK--------------------MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
K M GC P +N L+ + L+MA ++M A
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180
Query: 378 KGLSA 382
G+ A
Sbjct: 181 SGVKA 185
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 138/292 (47%), Gaps = 21/292 (7%)
Query: 98 LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG-FSGLVEMNKTKIYNMILRGWFKMS 156
L D VSY L+ C ++++A L F E +++ F +V YN +L G +
Sbjct: 371 LPDVVSYNTLIYGYCRLGNLMKA-FLLFDELRSIYLFPTIVT------YNTLLDGLCRQG 423
Query: 157 WWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYN 216
++ EM G+ D+ +Y+I ++ CK G A + + EM +G+++D AY
Sbjct: 424 ELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYA 483
Query: 217 TVIRAVGVSEGVDF--AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
T R VG + D A + EM G P ++ N V+ LC+ G + EA +L +M
Sbjct: 484 T--RIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMV 541
Query: 275 KKGCVPDVITYHCFFRC------LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
G +PD +TY L K REI F M+ G+ P + TY +L+ G
Sbjct: 542 SDGVIPDYVTYTSIIHAHLENGRLRKGREI---FYEMLSKGLTPSVVTYTVLIHGHAGKG 598
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
L F+ + +M+E G P+ YN+L++ L +D A + EM KG+
Sbjct: 599 RLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGI 650
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 174/395 (44%), Gaps = 23/395 (5%)
Query: 3 TLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGK---------FFEFDLSWNL 53
LS + + AL F W E+ F + + ++++IL + E ++ N+
Sbjct: 87 VLSSFRTSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANM 146
Query: 54 IHRMKDN-----PSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV 108
HR+ D SS + ++ Y +V + + F+K+ + L +V CN +
Sbjct: 147 -HRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRI 205
Query: 109 DALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM 168
+ K ++ + + +G G+ T YN +L + K + + EM
Sbjct: 206 LRILRDKDLMSKAVEVY---RTMGEFGIKPTIVT--YNTLLDSYCKGGKVQQGLDLLSEM 260
Query: 169 DKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV 228
+RG + +Y++ ++ + K G+ +A L EM K G+K+ YN +I +
Sbjct: 261 QRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGML 320
Query: 229 DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
A+ + EM G P+V T N+ I LC+ GR+ +A L++M +PDV++Y+
Sbjct: 321 AEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTL 380
Query: 289 F--RC-LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
C L + LFD + + P + TY LL R G L + +M G
Sbjct: 381 IYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGI 440
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+PD Y LV+ G L MA+++ +EM +GL
Sbjct: 441 APDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 475
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 131/277 (47%), Gaps = 9/277 (3%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWG 159
D V+Y LV+ C+ + AQE F E + G +E++ + Y + G K+
Sbjct: 443 DIVTYTILVNGSCKMGSLSMAQEF-FDEMLHEG----LELD-SYAYATRIVGELKLGDTS 496
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+ EEM +G DL Y++ +D +CK G +A +L ++M G+ D V Y ++I
Sbjct: 497 RAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSII 556
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
A + + ++ EM G PSVVT +I GR+ A+ +EM +KG +
Sbjct: 557 HAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGIL 616
Query: 280 PDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVV 336
P+VITY+ L K R + F M+E GI P +Y +L+ + G + +
Sbjct: 617 PNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSL 676
Query: 337 WKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDE 373
+K+M + G PD ++AL+ L L R+ +
Sbjct: 677 YKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQLES 713
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 160/382 (41%), Gaps = 70/382 (18%)
Query: 82 LVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENK----------N 130
L+++A+ + + EFG+K V+Y L+D+ C+ V + +L + N
Sbjct: 214 LMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYN 273
Query: 131 VGFSGLV-------------EMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKR 171
V +GL EM KT + YN ++ G+F + EEM +
Sbjct: 274 VLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLK 333
Query: 172 GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFA 231
G + +Y+ ++ +CK G+ A++ +M + DVV+YNT+I + A
Sbjct: 334 GASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKA 393
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------ 285
++ E+R + P++VT NT++ LC G + A + EM +G PD++TY
Sbjct: 394 FLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNG 453
Query: 286 HCFFRCLEKPRE--------------------ILG------------LFDRMIESGIRPK 313
C L +E I+G L + M+ G P
Sbjct: 454 SCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPD 513
Query: 314 MDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDE 373
+ Y +++ + G L + +KM G PD Y +++ A ++ G L R+
Sbjct: 514 LIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFY 573
Query: 374 EMFAKGLSAKPREELGTKLVQG 395
EM +KGL+ P T L+ G
Sbjct: 574 EMLSKGLT--PSVVTYTVLIHG 593
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 158/333 (47%), Gaps = 28/333 (8%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + +A F+ + + + T TYN+++D L + E +++ L M N P
Sbjct: 385 CRLGNLMKAFLLFDELRS-IYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMI-NEGIAP 442
Query: 66 NHATFRIMFKRYVTAHLVNEA--MGTFNKLDEFGLKDEVSYCNL-VDALCEYKHVIEAQE 122
+ T+ I LVN + MG+ + EF DE+ + L +D+ ++ E
Sbjct: 443 DIVTYTI---------LVNGSCKMGSLSMAQEFF--DEMLHEGLELDSYAYATRIV--GE 489
Query: 123 LCFGENKNVGFSGLVEM------NKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
L G+ FS EM IYN+++ G K+ + E ++M GV+ D
Sbjct: 490 LKLGDTSR-AFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPD 548
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
+Y+ + ++G+ K +++ EM KG+ VV Y +I ++ A +
Sbjct: 549 YVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFS 608
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF--RC-LE 293
EM+E G P+V+T N++I LC+ R+ +AY AEM +KG P+ +Y C +
Sbjct: 609 EMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMG 668
Query: 294 KPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
+E L L+ +M++ G++P T+ LL++ G+
Sbjct: 669 NWQEALSLYKQMLDRGVQPDSCTHSALLKQLGK 701
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/418 (22%), Positives = 179/418 (42%), Gaps = 46/418 (11%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A EF N + + F T +Y +V+ L ++ L M + + +PN TF ++
Sbjct: 234 AREFLNRLSSY-GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK-NCMPNEVTFDML 291
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV-DALCEYKHVIEAQELCFGENKNVG 132
+ + +V A+ ++ G + CN+V + +C+ V +A F N+G
Sbjct: 292 VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDA----FQFLNNMG 347
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
G T Y +L+G + W +E +EM ++ + +++ ++ I+C+ G
Sbjct: 348 SYGCSP--DTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGL 405
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY----------------- 235
+A L ++M + G ++++V YN ++ V VD A+ ++
Sbjct: 406 IEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLT 465
Query: 236 ---------------REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVP 280
EM + C P+VVT N ++ C+ G + EA ++ +M + GC P
Sbjct: 466 GLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTP 525
Query: 281 DVITYHCFFRCLE---KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVW 337
++ITY+ + E L L ++ +G+ P + TY ++ R + ++
Sbjct: 526 NLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMF 585
Query: 338 KKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+++LG P YN ++ AL + D A + M + G P E L++G
Sbjct: 586 HIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNG--CMPNELTYITLIEG 641
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 145/330 (43%), Gaps = 15/330 (4%)
Query: 56 RMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEY 114
R + +S PN A R+ +R + + EA ++ G +V C L+ LC
Sbjct: 34 RPEAPSASSPNPANARL--RRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRR 91
Query: 115 KHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVV 174
+A + + SG YN ++ G+ + R M V
Sbjct: 92 GRTSDAARVLRAAER----SGTAV--DVFAYNTLVAGYCRYGQLDAARRLIASMP---VA 142
Query: 175 KDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRV 234
D ++Y+ + +C G+ +A+ L +M +G + VV Y ++ AV S G AM V
Sbjct: 143 PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEV 202
Query: 235 YREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
EMR GC P++VT N +I +C GRV +A L + G PD ++Y + L
Sbjct: 203 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCA 262
Query: 295 PR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFA 351
+ ++ LF M+E P T+ ML+R F R G + V ++M GC+ +
Sbjct: 263 AKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTL 322
Query: 352 YNALVDALIDKGMLDMARKYDEEMFAKGLS 381
N +++ + +G +D A ++ M + G S
Sbjct: 323 CNIVINTICKQGRVDDAFQFLNNMGSYGCS 352
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 149/354 (42%), Gaps = 22/354 (6%)
Query: 33 TYNSVIDIL---GKFFE-FDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
TY +I L G+ E L +++HR P+ T+ ++ + + +AM
Sbjct: 147 TYTPIIRGLCDRGRVGEALSLLDDMLHR-----GCQPSVVTYTVLLEAVCKSTGFGQAME 201
Query: 89 TFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
+++ G V+Y +++ +C V +A+E + GF T Y
Sbjct: 202 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF-LNRLSSYGFQP-----DTVSYTT 255
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
+L+G W E + EM ++ + + ++ + + C+ G +A+++ ++M G
Sbjct: 256 VLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG 315
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ N VI + VD A + M GC P ++ TV+K LC R +A
Sbjct: 316 CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAK 375
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKF 324
+L EM +K C P+ +T++ F L + + L ++M E G + TY L+ F
Sbjct: 376 ELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGF 435
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
G + ++ M C P+ Y L+ L + LD A + EM K
Sbjct: 436 CVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQK 486
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 144/348 (41%), Gaps = 45/348 (12%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN+++ ++ + D + LI M P+ T+ + + V EA+ + +
Sbjct: 116 YNTLVAGYCRYGQLDAARRLIASMP----VAPDAYTYTPIIRGLCDRGRVGEALSLLDDM 171
Query: 94 DEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
G + V +Y L++A+C+ +A E+ E + G + YN+I+ G
Sbjct: 172 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEV-LDEMRAKGCTP-----NIVTYNVIINGM 225
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK-LYKEMKKKGIKMD 211
+ REF + G D SY+ + +C + K W+ V+ L+ EM +K +
Sbjct: 226 CREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLC-AAKRWEDVEELFAEMMEKNCMPN 284
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V ++ ++R V+ A++V +M GC + CN VI +C+ GRV +A+ L
Sbjct: 285 EVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLN 344
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
M GC PD I+Y + L + RW +
Sbjct: 345 NMGSYGCSPDTISYTTVLKGLCRAE-----------------------------RWEDAK 375
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ K+M C P+E +N + L KG+++ A E+M G
Sbjct: 376 ELL---KEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 420
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 122/285 (42%), Gaps = 18/285 (6%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWG 159
D +Y LV C Y + A+ L + + Y I+RG G
Sbjct: 112 DVFAYNTLVAGYCRYGQLDAARRL---------IASMPVAPDAYTYTPIIRGLCDRGRVG 162
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+ ++M RG + +Y++ ++ +CKS +A+++ EM+ KG ++V YN +I
Sbjct: 163 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVII 222
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
+ VD A + G QP V+ TV+K LC R + + AEM +K C+
Sbjct: 223 NGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCM 282
Query: 280 PDVITYHCFFR--C----LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV 333
P+ +T+ R C +E+ ++L ++M G +++ + G +
Sbjct: 283 PNEVTFDMLVRFFCRGGMVERAIQVL---EQMSGHGCAANTTLCNIVINTICKQGRVDDA 339
Query: 334 FVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
F M GCSPD +Y ++ L + A++ +EM K
Sbjct: 340 FQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK 384
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 109/245 (44%), Gaps = 18/245 (7%)
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++R + ++ G D+ +Y+ + C+ G+ A +L M
Sbjct: 84 LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP--- 140
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ D Y +IR + V A+ + +M GCQPSVVT +++ +C++ +A
Sbjct: 141 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 200
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCL------EKPREILGLFDRMIESGIRPKMDTYVMLL 321
VL EM KGC P+++TY+ + + RE L +R+ G +P +Y +L
Sbjct: 201 EVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL---NRLSSYGFQPDTVSYTTVL 257
Query: 322 RKF---GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+ RW + +F +M E C P+E ++ LV GM++ A + E+M
Sbjct: 258 KGLCAAKRWEDVEELFA---EMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGH 314
Query: 379 GLSAK 383
G +A
Sbjct: 315 GCAAN 319
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 127/307 (41%), Gaps = 18/307 (5%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRM--KDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
T +Y +V+ L + ++ + L+ M K+ P PN TF L+ +A
Sbjct: 355 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCP---PNEVTFNTFICILCQKGLIEQATM 411
Query: 89 TFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
++ E G + + V+Y LV+ C V A EL F + T Y
Sbjct: 412 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALEL---------FYSMPCKPNTITYTT 462
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
+L G E EM ++ ++ ++++ + C+ G +A++L ++M + G
Sbjct: 463 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 522
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+++ YNT++ + + A+ + + G P +VT +++I +L RV EA
Sbjct: 523 CTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI 582
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFD---RMIESGIRPKMDTYVMLLRKF 324
+ + G P + Y+ L K G D M+ +G P TY+ L+
Sbjct: 583 KMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGL 642
Query: 325 GRWGFLR 331
FL+
Sbjct: 643 ANEDFLK 649
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 125/287 (43%), Gaps = 24/287 (8%)
Query: 6 CYANDWKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C A W+ A E V +C T +N+ I IL + + + LI +M ++ +
Sbjct: 366 CRAERWEDAKELLKEMVRKNCPPNEVT--FNTFICILCQKGLIEQATMLIEQMSEHGCEV 423
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELC 124
N T+ + + V+ A+ F + + ++Y L+ LC + + A EL
Sbjct: 424 -NIVTYNALVNGFCVQGRVDSALELFYSMP--CKPNTITYTTLLTGLCNAERLDAAAEL- 479
Query: 125 FGENKNVGFSGLVEM------NKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
L EM +N+++ + + + E E+M + G +L
Sbjct: 480 -----------LAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLI 528
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+Y+ +D + +A++L + G+ D+V Y+++I + + V+ A++++ +
Sbjct: 529 TYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIV 588
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
+++G +P V N ++ LC+ A A M GC+P+ +TY
Sbjct: 589 QDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTY 635
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 152/323 (47%), Gaps = 23/323 (7%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDAL----CEYKHVIEAQEL 123
F + Y + NEA+ F+ + GL + V+Y ++DA E+K V+E
Sbjct: 227 AFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEI--- 283
Query: 124 CFGENKNVGFSGLVE--MNKTKI-YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
F G++ + +I +N +L + W R + M +G+ +D+ +Y
Sbjct: 284 ---------FDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTY 334
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ +D +CK G+ A ++ EM K I +VV Y+T+I +D A+ ++ EM+
Sbjct: 335 NTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKF 394
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---RE 297
+G V+ NT++ + + GR +A V EM G DV+TY+ K E
Sbjct: 395 LGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDE 454
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ +F+ M + P + TY L+ + + G + V+++ ++ G D Y+AL+D
Sbjct: 455 VRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALID 514
Query: 358 ALIDKGMLDMARKYDEEMFAKGL 380
AL G+++ + +EM +G+
Sbjct: 515 ALCKNGLVESSVTLLDEMTKEGI 537
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 137/305 (44%), Gaps = 24/305 (7%)
Query: 33 TYNSVIDILGK-FFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
TYN+VID GK EF + M N P+ TF + L A F+
Sbjct: 262 TYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQ-PDRITFNSLLAVCSRGGLWEAARRLFS 320
Query: 92 KLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI------ 144
+ + G+ ++ +Y L+DA+C+ G ++ F + EM I
Sbjct: 321 AMVDKGIDQDIFTYNTLLDAVCK------------GGQMDLAFEIMSEMPTKNILPNVVT 368
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y+ ++ G+ K+ + EM GV D SY+ + + K G+ +A+ + KEM+
Sbjct: 369 YSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEME 428
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
GI+ DVV YN ++ G D RV+ EM+ P+++T +T+I + + G +
Sbjct: 429 NAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYK 488
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
EA V E + G DV+ Y L K + + L D M + GIRP + TY ++
Sbjct: 489 EAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSII 548
Query: 322 RKFGR 326
FGR
Sbjct: 549 DAFGR 553
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 184/401 (45%), Gaps = 49/401 (12%)
Query: 11 WKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
W+ A F+ + D TYN+++D + K + DL++ ++ M + +PN T+
Sbjct: 312 WEAARRLFSAM-VDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMP-TKNILPNVVTY 369
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENK 129
M Y +++A+ FN++ G+ D VSY L+ + +A ++C E +
Sbjct: 370 STMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVC-KEME 428
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
N G YN +L G+ K + + R +EEM + V +L +YS +D+ K
Sbjct: 429 NAGIR-----KDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSK 483
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
G +A+++++E K+ G+K DVV Y+ +I A+ + V+ ++ + EM + G +P+VVT
Sbjct: 484 GGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVT 543
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESG 309
N++I GR A V+ + + + +E I + IES
Sbjct: 544 YNSIIDAF---GRSASAQCVVDDSGETTALQ-----------VESLSSI--VVQEAIESQ 587
Query: 310 IRPKMDTYVMLLRKFGRWGFLRP-------------VFVVWKKMEELGCSPDEFAYNALV 356
K D ++ + FG+ + + V++KM EL P+ ++A++
Sbjct: 588 AADKEDNRIIEI--FGKLAAEKACEAKNSGKQEILCILGVFQKMHELKIKPNVVTFSAIL 645
Query: 357 ------DALIDKGM-LDMARKYDEEMF--AKGLSAKPREEL 388
D+ D M L+ R +D +++ A GL RE +
Sbjct: 646 NACSRCDSFEDASMLLEELRLFDNQVYGVAHGLLMGYRENV 686
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 106/245 (43%), Gaps = 39/245 (15%)
Query: 170 KRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG------ 223
K G K ++++S + +SG +A+K++ MK G+ ++V YN VI A G
Sbjct: 218 KEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEF 277
Query: 224 ----------VSEGV--------------------DFAMRVYREMREMGCQPSVVTCNTV 253
+S GV + A R++ M + G + T NT+
Sbjct: 278 KKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTL 337
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGI 310
+ +C+ G++ A+ +++EMP K +P+V+TY K + L +F+ M G+
Sbjct: 338 LDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGV 397
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
+Y LL + + G V K+ME G D YNAL+ + D R+
Sbjct: 398 GLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRR 457
Query: 371 YDEEM 375
EEM
Sbjct: 458 VFEEM 462
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 13/231 (5%)
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK-LYKEMKKKGIKMDVVAYNTV 218
K E ++ M GV D +++ + + C G W+A + L+ M KGI D+ YNT+
Sbjct: 279 KVVEIFDGMLSNGVQPDRITFNSLLAV-CSRGGLWEAARRLFSAMVDKGIDQDIFTYNTL 337
Query: 219 IRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGC 278
+ AV +D A + EM P+VVT +T+I + GR+ +A + EM G
Sbjct: 338 LDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGV 397
Query: 279 VPDVITYHCFFRCLEKPREILGLFDRMIE-------SGIRPKMDTYVMLLRKFGRWGFLR 331
D ++Y+ K LG F++ ++ +GIR + TY LL +G+
Sbjct: 398 GLDRVSYNTLLSVYAK----LGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYD 453
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
V V+++M+ SP+ Y+ L+D G+ A + E GL A
Sbjct: 454 EVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKA 504
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 176/403 (43%), Gaps = 42/403 (10%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFE---FDLSWNLIHRMKDNPSSIP 65
D K AL+FF W +T F TT++Y ++ IL F+ FD ++ + + + +P
Sbjct: 107 QDPKLALKFFRWAKTKFGFCLTTESYCLLVHIL--FYARMYFDANF-FLKELISSRRILP 163
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKL----DEFGLKDEVSYCNLVDALCEYKHVIEAQ 121
F +++ T ++ G F+ L E G+ +E C + + +
Sbjct: 164 GFDVFEVLWS---TRNVCVPGFGVFDALFSVFIELGMLEEAGQC--------FSRMTRFR 212
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
+ N L + K + N +F+ +M G+ + + +Y+
Sbjct: 213 VFPKARSCNAFLYRLAKTGKGDLSN----------------KFFRDMVGAGIAQSVFTYN 256
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
I + MCK G A L+ +MK+ G+ D+V YN++I G +D + ++ EM+++
Sbjct: 257 IMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDV 316
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REI 298
GC+P V+T N +I C+ ++ +A+ L EM G P+V+TY L K ++
Sbjct: 317 GCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQA 376
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+ M G+ P TY L+ + G+L + +M ++ + Y L+D
Sbjct: 377 IKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDG 436
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGEQ 401
L +G + A M G++ P + T LV G + ++
Sbjct: 437 LCKEGRMMEAEDLFRAMIKAGVT--PNLKTYTALVHGHIKNKR 477
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 171/371 (46%), Gaps = 16/371 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS+ID GK D S+ L MKD P+ T+ + + + +A ++
Sbjct: 289 TYNSLIDGYGKLGLLDESFCLFEEMKDVGCE-PDVITYNALINCFCKYEQMPKAFHFLHE 347
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ GLK + V+Y L+DALC+ +H+++ + + VG S Y ++
Sbjct: 348 MKNSGLKPNVVTYSTLIDALCK-EHMLQQAIKFLLDMRRVGLSP-----NEFTYTSLIDA 401
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + + +EM + V ++ +Y+ +D +CK G+ +A L++ M K G+ +
Sbjct: 402 NCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPN 461
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ Y ++ ++ V+ A+ + +E++E +P ++ T+I LC ++ E V++
Sbjct: 462 LKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMS 521
Query: 272 EMPKKGCVPDVITY----HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
EM G + + Y +F+ K E L L M + G+ + T+ +L+ +
Sbjct: 522 EMKACGIRANSVIYTIRMDAYFKT-GKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKK 580
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAY-NALVDALIDKGMLDMARKYDEEMFAKGLSAKPRE 386
G + + +M + P+ A AL+D L ++ A+K +EM K + P +
Sbjct: 581 GLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMV--PDK 638
Query: 387 ELGTKLVQGGL 397
T L+ G L
Sbjct: 639 IAYTALIDGNL 649
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 168/406 (41%), Gaps = 57/406 (14%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++I+ K+ + +++ +H MK N PN T+ + H++ +A+
Sbjct: 324 TYNALINCFCKYEQMPKAFHFLHEMK-NSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLD 382
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENK-NVGFSGLVEMNKTKIYNMILR 150
+ GL +E +Y +L+DA C+ ++ +A +L + VGF+ + Y +L
Sbjct: 383 MRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVT-------YTTLLD 435
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYS----------------------------- 181
G K + + + M K GV +L +Y+
Sbjct: 436 GLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKP 495
Query: 182 ---IYMDI---MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
+Y I +C K + + EMK GI+ + V Y + A + A+ +
Sbjct: 496 DLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLL 555
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD-------VITYHCF 288
+EM ++G + ++VT +I LC+ G V EA A M P+ +I C
Sbjct: 556 QEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCK 615
Query: 289 FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
+E ++ LFD M + + P Y L+ + + + +M ELG D
Sbjct: 616 NNYIEAAKK---LFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELD 672
Query: 349 EFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQ 394
AY +LV L ++ AR + EM KG+ P E L +L++
Sbjct: 673 LHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIV--PDEILCIRLLR 716
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 94/212 (44%), Gaps = 6/212 (2%)
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELC 124
N + I Y EA+ ++ + G++ V++C L+D LC+ V EA +
Sbjct: 531 NSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDY- 589
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
F + ++ N + ++ G K ++ ++ ++EM + +V D +Y+ +
Sbjct: 590 FARMADFN----LQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALI 645
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D K +A+ + M + G+++D+ AY +++ + V A EM G
Sbjct: 646 DGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIV 705
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
P + C +++ E G + EA + E+ KK
Sbjct: 706 PDEILCIRLLRKYYELGSIDEAIELHDELLKK 737
>gi|357143144|ref|XP_003572818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Brachypodium distachyon]
Length = 496
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 154/313 (49%), Gaps = 20/313 (6%)
Query: 69 TFRIMFKRYVTAHLVNE-AMGTFNKLDEFG--LKDEVSYCNLVDALCEYKHVIEAQELCF 125
TF I+F+R+ + + A+ F L +D + +L+DAL + +H +A L
Sbjct: 135 TFPILFERFAASQRRPDIAVRLFLSLHRSHRVAQDLPLFNSLLDALGKSRHASKAASLVR 194
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
+ + YN + GW ++ + + +M + G+ +Y++ +
Sbjct: 195 ALERRFPPDVVT-------YNTLADGWCRVKDTSRALDLLRQMAESGIAPTKTTYNVILK 247
Query: 186 IMCKSGKPWKAVKLYKEMKKKG-----IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
++G+ A + +MKK+G K DVV+Y T+I +GV+ +D A +++ EM +
Sbjct: 248 GFFRAGQLQHAWNFFLQMKKRGSKDENCKPDVVSYTTIIHGLGVAGQLDKARKLFDEMSK 307
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPRE 297
GC P++ T N +I+++C+ G V +A V +M +K +P+V+TY R L K
Sbjct: 308 EGCPPTIATYNALIQVICKKGNVEDAVTVFDDMIRKDYIPNVVTYTVLIRGLCHVGKIDR 367
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE-LGCSPDEFAYNALV 356
+ L +RM G P + TY +L+R G + ++++M + C P++ YN ++
Sbjct: 368 AMKLMERMKNEGCEPVVQTYNVLIRYSFEEGEMDKALHLFERMSKGEECLPNQDTYNIVI 427
Query: 357 DAL-IDKGMLDMA 368
A+ + K DMA
Sbjct: 428 SAMFVRKRAEDMA 440
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 116/252 (46%), Gaps = 10/252 (3%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
++N +L K K +++R D+ +Y+ D C+ +A+ L ++M
Sbjct: 172 LFNSLLDALGKSRHASKAASLVRALERR-FPPDVVTYNTLADGWCRVKDTSRALDLLRQM 230
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG-----CQPSVVTCNTVIKLLC 258
+ GI YN +++ + + A + +M++ G C+P VV+ T+I L
Sbjct: 231 AESGIAPTKTTYNVILKGFFRAGQLQHAWNFFLQMKKRGSKDENCKPDVVSYTTIIHGLG 290
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMD 315
G++ +A + EM K+GC P + TY+ + + K + + +FD MI P +
Sbjct: 291 VAGQLDKARKLFDEMSKEGCPPTIATYNALIQVICKKGNVEDAVTVFDDMIRKDYIPNVV 350
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
TY +L+R G + + ++M+ GC P YN L+ ++G +D A E M
Sbjct: 351 TYTVLIRGLCHVGKIDRAMKLMERMKNEGCEPVVQTYNVLIRYSFEEGEMDKALHLFERM 410
Query: 376 FAKGLSAKPREE 387
+KG P ++
Sbjct: 411 -SKGEECLPNQD 421
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 111/279 (39%), Gaps = 41/279 (14%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C D RAL+ + + T TYN ++ + + +WN +MK S
Sbjct: 215 CRVKDTSRALDLLRQM-AESGIAPTKTTYNVILKGFFRAGQLQHAWNFFLQMKKRGSK-- 271
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCF 125
DE D VSY ++ L + +A++L F
Sbjct: 272 ----------------------------DENCKPDVVSYTTIIHGLGVAGQLDKARKL-F 302
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
E G + YN +++ K +++M ++ + ++ +Y++ +
Sbjct: 303 DEMSKEGCPPTIA-----TYNALIQVICKKGNVEDAVTVFDDMIRKDYIPNVVTYTVLIR 357
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE-MGCQ 244
+C GK +A+KL + MK +G + V YN +IR +D A+ ++ M + C
Sbjct: 358 GLCHVGKIDRAMKLMERMKNEGCEPVVQTYNVLIRYSFEEGEMDKALHLFERMSKGEECL 417
Query: 245 PSVVTCNTVIKLLCENGRVRE---AYAVLAEMPKKGCVP 280
P+ T N VI + R + A ++ EM ++G +P
Sbjct: 418 PNQDTYNIVISAMFVRKRAEDMAIAARMVMEMVERGYLP 456
>gi|302763351|ref|XP_002965097.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
gi|300167330|gb|EFJ33935.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
Length = 540
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 163/353 (46%), Gaps = 14/353 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+YN VI L F ++ L+ M + + T I+ K V++A+ F+
Sbjct: 6 SYNIVIRGLCLAGRFSRAYELLKEM-EALGIKKSQVTHGIILKALCERKEVDQALSYFHS 64
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ D VSY L+ L + + A EL F E + G +V Y I+
Sbjct: 65 VSPRSDLDVVSYTTLIMGLADSGRIDVACEL-FEEMSSSGSQCVVA------YTAIINAL 117
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
FK + +E M R DL ++++ + +CK+GK +A ++++EM +KG K D+
Sbjct: 118 FKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDI 177
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
+ Y +++ + + +D A ++ +E+ G +P+ VT + I LC+NGRV EA ++ E
Sbjct: 178 IVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVRE 237
Query: 273 MPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M K C +V+ HC F LE K E L L D M++ G+ + Y L+
Sbjct: 238 MGKM-CAAEVL--HCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRR 294
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+++ M GC PD Y +V +G + A K E M A GL A
Sbjct: 295 NDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEA 347
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 150/327 (45%), Gaps = 33/327 (10%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ + + A +++EA ++ G+K EV+Y + + LC+ V EA +L
Sbjct: 175 PDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKL 234
Query: 124 -------CFGENKNVGFSGLV-------------EMNK------TKIYNMILRGWFKMSW 157
C E + F G V EM K + Y ++ G F +
Sbjct: 235 VREMGKMCAAEVLHCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRR 294
Query: 158 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
+ +E +E M ++G V D +Y + + CK GK A K+ + M G++ + YN+
Sbjct: 295 NDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNS 354
Query: 218 VIRA-VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK 276
++ +GV+ + A+ VY M +PS+VT N ++ LC+ G+ +A VL EM ++
Sbjct: 355 LMDGFLGVNRARE-AINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRER 413
Query: 277 -GCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
G VP +++Y L K E + +F M+++G+ P + L++ +
Sbjct: 414 DGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDE 473
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDAL 359
+ + M +G +PD AYNALV L
Sbjct: 474 ATQLLRDMPRMGITPDALAYNALVKVL 500
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 7/223 (3%)
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
D+ SY+I + +C +G+ +A +L KEM+ GIK V + +++A+ + VD A+ +
Sbjct: 3 DVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYF 62
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL--- 292
+ VV+ T+I L ++GR+ A + EM G V+ Y L
Sbjct: 63 HSVSPRS-DLDVVSYTTLIMGLADSGRIDVACELFEEMSSSGS-QCVVAYTAIINALFKA 120
Query: 293 EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
+P + + F+RM+ P + T+ +++ + G L V+++M G PD Y
Sbjct: 121 HRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVY 180
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+LVD L M+D ARK +E+ ++G+ KP E T + G
Sbjct: 181 TSLVDGLSKASMMDEARKLLQEIVSRGM--KPTEVTYTSFISG 221
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 159/389 (40%), Gaps = 23/389 (5%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A E F E + Y ++I+ L K D + RM P+ TF ++
Sbjct: 92 ACELFE--EMSSSGSQCVVAYTAIINALFKAHRPDQAIACFERMVARKCD-PDLRTFTVV 148
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
A +N A F +++ G K D + Y +LVD L + + EA++L E + G
Sbjct: 149 ITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLVDGLSKASMMDEARKL-LQEIVSRG 207
Query: 133 FSGLVEMNKTKI-YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS-YSIYMDIMCKS 190
M T++ Y + G K + + EM K + LH + Y+
Sbjct: 208 ------MKPTEVTYTSFISGLCKNGRVEEAGKLVREMGKMCAAEVLHCIFGGYV----LE 257
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTC 250
GK +A+ L EM KKG+ +DV Y +I + D A ++ M GC P T
Sbjct: 258 GKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGCVPDTRTY 317
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIE 307
++ C+ G+++ A V+ M G + Y+ F + + RE + ++ M+
Sbjct: 318 GMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREAINVYSTMLR 377
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL-GCSPDEFAYNALVDALIDKGMLD 366
++P + TY +L+ + G +V ++M E G P +Y L+ L G D
Sbjct: 378 KMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRAD 437
Query: 367 MARKYDEEMFAKGLSAKPREELGTKLVQG 395
A EM G+ P T L+Q
Sbjct: 438 EAIDVFTEMVDNGVV--PDCPSCTSLIQA 464
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 108/227 (47%), Gaps = 12/227 (5%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQE 122
+P+ T+ ++ + + A +D GL+ Y +L+D EA
Sbjct: 311 VPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREA-- 368
Query: 123 LCFGENKNVGFSGLVEMNKTKI--YNMILRGWFKMSWWGKCREFWEEMDKR-GVVKDLHS 179
NV + L +M K I YN+++ G K+ R EM +R G+V + S
Sbjct: 369 ------INVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVS 422
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y + + K+G+ +A+ ++ EM G+ D + ++I+A+ +++ +D A ++ R+M
Sbjct: 423 YRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMP 482
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
MG P + N ++K+LC +V A+ VL EM CVPD T+
Sbjct: 483 RMGITPDALAYNALVKVLCGGAKVGPAWDVLVEMMDNSCVPDGSTFR 529
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 138/309 (44%), Gaps = 35/309 (11%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TY S I L K + + L+ M ++ H +F YV + EA+
Sbjct: 211 TEVTYTSFISGLCKNGRVEEAGKLVREMGKMCAAEVLHC----IFGGYVLEGKIEEALTL 266
Query: 90 FNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL--------CFGENKNVGF--SGLVE 138
+++ + G+ +V Y NL+ L + EAQE+ C + + G S +
Sbjct: 267 KDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCK 326
Query: 139 MNKTK-------------------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
K + +YN ++ G+ ++ + + M ++ V + +
Sbjct: 327 QGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREAINVYSTMLRKMVKPSIVT 386
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKK-GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
Y+I M +CK G+ A + +EM+++ GI +V+Y T+I +G + D A+ V+ EM
Sbjct: 387 YNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEM 446
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI 298
+ G P +C ++I+ L R+ EA +L +MP+ G PD + Y+ + L ++
Sbjct: 447 VDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNALVKVLCGGAKV 506
Query: 299 LGLFDRMIE 307
+D ++E
Sbjct: 507 GPAWDVLVE 515
>gi|115455091|ref|NP_001051146.1| Os03g0728200 [Oryza sativa Japonica Group]
gi|50428716|gb|AAT77067.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108710874|gb|ABF98669.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113549617|dbj|BAF13060.1| Os03g0728200 [Oryza sativa Japonica Group]
Length = 601
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 118/244 (48%), Gaps = 3/244 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y +L GW +M + + M V D+ ++ + G+ A +L +EM+
Sbjct: 198 YTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREME 257
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
++G + V+Y T+++ +G VD AMRV+ EMR GC P VT T++ C+ GR+
Sbjct: 258 RRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTYGTLVTAFCKAGRIS 317
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
+ Y L M ++G D Y FF EK ++ L L +RM E P + Y +++
Sbjct: 318 QGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQLEECLELMERMRECRCPPDLSIYNVVI 377
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
R + G + +W +ME SP + +V L+ +G+L A Y ++M +GL
Sbjct: 378 RLACKLGETKQAVALWNEMETNELSPGVDTFAIMVTGLVGQGVLVEACGYFKDMVGRGLF 437
Query: 382 AKPR 385
P+
Sbjct: 438 VAPQ 441
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 76/192 (39%), Gaps = 33/192 (17%)
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
K+G A +L +E++ + + + + Y ++ +D A V M+ P VV
Sbjct: 173 KTGHVAVAEQLVEELQPR-LPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVV 231
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIES 308
NT++ +GR +A+ + EM ++GC P+ ++Y
Sbjct: 232 VFNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSY----------------------- 268
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
L++ G G + V+ +M GC+PD Y LV A G +
Sbjct: 269 ---------TTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTYGTLVTAFCKAGRISQG 319
Query: 369 RKYDEEMFAKGL 380
++ + M +GL
Sbjct: 320 YEFLDVMAREGL 331
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 162/351 (46%), Gaps = 10/351 (2%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N+V+ L + + S L+ ++ S+ N T I + + EA+
Sbjct: 117 TFNNVLHALCQKGDIMESGALLAKVLKRGMSV-NKFTCNIWIRGLCEGGRLEEAVALVES 175
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+D + D V+Y L+ LC+ V EA + + + G + + T YN I+ G+
Sbjct: 176 MDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYL----RRMMNQGCIPDDFT--YNTIIDGY 229
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K + E ++ +G V D +Y ++ +C G +A++L+ E + K +K D+
Sbjct: 230 CKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDL 289
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V YN++++ + + A++V EM E GC P + T N VI LC+ G + +A V+ +
Sbjct: 290 VVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMND 349
Query: 273 MPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
KG +PDV T++ K ++ L L +RM GI P TY +L + G
Sbjct: 350 AIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGK 409
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ V +++M GC P+ YN L++ L+ A M GL
Sbjct: 410 AKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGL 460
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 175/413 (42%), Gaps = 44/413 (10%)
Query: 9 NDWKRAL-------EFFNWVET-DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDN 60
N W R L E VE+ D + TYN+++ L K + + + RM N
Sbjct: 154 NIWIRGLCEGGRLEEAVALVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMM-N 212
Query: 61 PSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIE 119
IP+ T+ + Y ++ EA G + D V+YC+L++ LC V
Sbjct: 213 QGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVER 272
Query: 120 AQELCFGENKN-------VGFSGLVE--------------MNKTK---------IYNMIL 149
A EL F E + V ++ LV+ MN+ YN+++
Sbjct: 273 ALEL-FNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVI 331
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G KM + +G + D+ +++ +D CK K A++L + M GI
Sbjct: 332 NGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIA 391
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
D + YN+V+ + + + EM GC+P+ +T N +I+ C+ ++ EA V
Sbjct: 392 PDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGV 451
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGR 326
+ M + G VPD I+++ + ++ G LF ++ E G DT+ +L+ +
Sbjct: 452 IVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSS 511
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++ ++ +M G PD + Y LVD +D A + EM +KG
Sbjct: 512 KLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKG 564
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 118/239 (49%), Gaps = 6/239 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN I+ ++ + + + M GV D ++++ + C +G+P A++L + +
Sbjct: 13 YNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSLP 72
Query: 205 KKGIKMDVVAYNTVIRAV-GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
++G + +AY TV+R + G D A ++ EM P V T N V+ LC+ G +
Sbjct: 73 ERGCDVKPLAYCTVVRGLYAHGHGYD-ARHLFDEMLRRDVFPDVATFNNVLHALCQKGDI 131
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVML 320
E+ A+LA++ K+G + T + + R L + E + L + M ++ I P + TY L
Sbjct: 132 MESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAYIAPDVVTYNTL 190
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+R + ++ ++M GC PD+F YN ++D + ML A + ++ KG
Sbjct: 191 MRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKG 249
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 121/307 (39%), Gaps = 43/307 (14%)
Query: 116 HVIEAQELCFGENKNVGFSGLVEMN------KTKIYNMILRGWFKMSWWGKCREFWEEMD 169
H + + C +V L + K Y ++RG + R ++EM
Sbjct: 48 HTVRIKSFCITGRPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEML 107
Query: 170 KRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG---------------------- 207
+R V D+ +++ + +C+ G ++ L ++ K+G
Sbjct: 108 RRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLE 167
Query: 208 ------------IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
I DVV YNT++R + V A + R M GC P T NT+I
Sbjct: 168 EAVALVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIID 227
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPRE-ILGLFDRMIESGIRP 312
C+ ++EA +L + KG VPD +TY C E E L LF+ ++P
Sbjct: 228 GYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKP 287
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
+ Y L++ R G + V +M E GC PD + YN +++ L G + A
Sbjct: 288 DLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVM 347
Query: 373 EEMFAKG 379
+ KG
Sbjct: 348 NDAIVKG 354
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 161/390 (41%), Gaps = 22/390 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C D +RALE FN + YNS++ L + + +++ M ++ P
Sbjct: 265 CAEGDVERALELFNEAQAK-DLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCH-P 322
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ I+ +++A N G L D ++ ++D C+ + A +L
Sbjct: 323 DIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLV 382
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+ + G+ T YN +L G K + E +EEM +G + +Y+I +
Sbjct: 383 ----ERMWMYGIAPDAIT--YNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILI 436
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ CK + +A + M + G+ D +++NT+I + +D A +++++ E G
Sbjct: 437 ENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYS 496
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF----RCLEKPREILG 300
+ T N +I ++ A + EM KG PD+ TY + R +
Sbjct: 497 ATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVH 556
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L + M+ G P M T+ +L + + M +G P+ +VD ++
Sbjct: 557 LAE-MVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPE------VVDTIL 609
Query: 361 --DKGMLDMARKYDEEMFAKGLSAKPREEL 388
DK + + EE+ KG + P E+
Sbjct: 610 STDKKEIAAPKILVEELMKKGHISYPTYEV 639
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 171/418 (40%), Gaps = 74/418 (17%)
Query: 22 ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAH 81
E DC+ T TY ++ L + + NL M++ PN T+ +M
Sbjct: 67 EDDCY--PTVRTYTVIVHALFESGRRMEAINLFSEMRERGCE-PNIHTYTVMINAMCKET 123
Query: 82 LVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL----------------- 123
+ E +++ E GL V +Y L+D C+ V AQE+
Sbjct: 124 KLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYN 183
Query: 124 ------CFGENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKR 171
C +N + + L +M ++++ YN ++ G K+ + M++
Sbjct: 184 ELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNEN 243
Query: 172 GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFA 231
GVV D +YS+++D +CK G+ +A L+ +K+KGIK + V Y +I + +D A
Sbjct: 244 GVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDA 303
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG--CV---------- 279
+ M C P+ T N +I LC+ +V+EA ++ M +KG C
Sbjct: 304 NSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVA 363
Query: 280 -----------------------PDVITYHCFFRCL---EKPREILGLFDRMIESGIRPK 313
PDV Y F +E + M E G+ P
Sbjct: 364 MLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPD 423
Query: 314 MDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
TY +++ +G G L P F V K+M + GC P Y+ L+ L+ + ++ +KY
Sbjct: 424 ALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKE---ELTKKY 478
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 140/323 (43%), Gaps = 24/323 (7%)
Query: 83 VNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN- 140
VN A FN + + G + +EVSY NL+ LCE V E + F + E +
Sbjct: 20 VNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINI---------FKKMREDDC 70
Query: 141 --KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK 198
+ Y +I+ F+ + + EM +RG ++H+Y++ ++ MCK K + +
Sbjct: 71 YPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRR 130
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
+ EM +KG+ V YN +I V+ A + M C P+ T N +I C
Sbjct: 131 ILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFC 190
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCLEKPREILGLFDRMIESGIRP 312
V A A+L++M + P V+TY+ C L+ +L L M E+G+ P
Sbjct: 191 RKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNL---MNENGVVP 247
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
TY + + + G + V++ ++E G +E Y AL+D G +D A
Sbjct: 248 DQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLL 307
Query: 373 EEMFAKGLSAKPREELGTKLVQG 395
+ M + P L+ G
Sbjct: 308 DRMLTE--DCLPNSSTYNALIDG 328
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 162/412 (39%), Gaps = 51/412 (12%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + RA+ + + + T + TYNS+I K D ++ L++ M +N +P
Sbjct: 190 CRKKNVHRAMALLSKM-LESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNEN-GVVP 247
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
+ T+ + + EA FN L E G+K +EV Y L+D C+ + +A L
Sbjct: 248 DQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLL 307
Query: 125 FGENKNVGFSGLVE--MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L E + + YN ++ G K + E M ++G+ + +Y+I
Sbjct: 308 D--------RMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTI 359
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ M K G A ++ +M G + DV Y I A + A + M E G
Sbjct: 360 LIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERG 419
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP------- 295
P +T VI G + A+ VL M GC P TY C + L K
Sbjct: 420 VMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYK 479
Query: 296 -------------------------REILGLFDRMIESGIRPKMDTYVML---LRKFGRW 327
L LF++M+E G P ++TY L L K GR
Sbjct: 480 NVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRL 539
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
G + +F M E G SP E YN+L++ + G+ A + M G
Sbjct: 540 GVAQKLF---DHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHG 588
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 160/404 (39%), Gaps = 53/404 (13%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
Y ++ID K + D + +L+ RM +PN +T+ + V EA+ +
Sbjct: 287 YTALIDGYCKAGKMDDANSLLDRML-TEDCLPNSSTYNALIDGLCKERKVQEALLLMESM 345
Query: 94 DEFGLKDEV-SYCNLVDALC-----EYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
+ GLK V +Y L+ A+ +Y H I Q + G +V IY
Sbjct: 346 IQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDV-----------YIYTA 394
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
+ + + + M +RGV+ D +Y++ +D G A + K M G
Sbjct: 395 FIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTG 454
Query: 208 IKMDVVAYNTVIR------------AVGVSEGV-----------------DFAMRVYREM 238
Y+ +I+ V + + + + A+ ++ +M
Sbjct: 455 CDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKM 514
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC---LEKP 295
E GC P++ T +I LC+ GR+ A + M ++G P Y+ C L
Sbjct: 515 LEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIY 574
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
+ + L M+E G P +++ +L G VV+ + + G + DE A+ L
Sbjct: 575 GDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKIL 634
Query: 356 VDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDG 399
+D L+ G+ D + M A+G P+ +++ GLDG
Sbjct: 635 IDGLLKNGLSDGCSELLGVMEARGCQIHPQT---YRMLIEGLDG 675
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 180/398 (45%), Gaps = 23/398 (5%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
AN A+E F E+ T YN+++ + + F L+ M++ +P+
Sbjct: 228 ANQEALAVEIFARAESSV--GDTVQVYNAMMGVYARNGRFSKVKELLDLMRER-GCVPDL 284
Query: 68 ATFRIMFKRYVTAHLV--NEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCF 125
+F + + + + N A+ N++ G++ ++ N + + C + +E F
Sbjct: 285 VSFNTLINARMKSGAMEPNLALQLLNEVRRSGIRPDIITYNTLISACSRESNLEEAVAVF 344
Query: 126 GENKNVGFSGLVEMNKTK----IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
+ +E ++ + YN ++ + + + K E ++E++ +G D +Y+
Sbjct: 345 SD---------MESHRCQPDLWTYNAMISVYGRCARARKAEELFKELESKGFFPDAVTYN 395
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+ + G K + +EM K+G D + YNT+I G D AM++YR+M+
Sbjct: 396 SLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSS 455
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH---CFFRCLEKPREI 298
G P VT +I L + +V EA V++EM G P + TY C + K E
Sbjct: 456 GRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEA 515
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
F+ M SGI+P Y ++L F R+ ++ ++ +M G +PD Y ++ A
Sbjct: 516 EETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREGFTPDNGLYEVMMHA 575
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGG 396
L+ + M D+ + +M + LS + + + LV+GG
Sbjct: 576 LVRENMWDVVDRIIRDM--EELSGMNPQVISSVLVKGG 611
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 131/316 (41%), Gaps = 22/316 (6%)
Query: 57 MKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNL-VDALCEYK 115
M+D PS P + + + + +NE +L + GLK S L ++A +
Sbjct: 836 MRDGPS--PTVDSVNGLLQALIVDRRLNELYVVIQELQDMGLKISKSSILLTLEAFAQAG 893
Query: 116 HVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVK 175
++ E Q++ G K G+ +Y ++LR K EM++ G
Sbjct: 894 NLFEVQKIYNG-MKAAGY-----FPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQP 947
Query: 176 DLHS----YSIYMDIMCKSGKPWKAVKL-YKEMKKKGIKMDVVAYNTVIRAVGVSEGVDF 230
DL +Y+ I + +K++ + Y++++ +K D YNT+I +
Sbjct: 948 DLQICNSILKLYLGI-----EDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEE 1002
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF-- 288
+ +MR +G +P + T ++I + +A + E+ G D YH
Sbjct: 1003 GFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMK 1062
Query: 289 -FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
+R R+ L M ESGI P + T +L+ +G+ G V K + G
Sbjct: 1063 TYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVL 1122
Query: 348 DEFAYNALVDALIDKG 363
D Y++++DA + KG
Sbjct: 1123 DTLPYSSVIDAYLKKG 1138
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 109/259 (42%), Gaps = 7/259 (2%)
Query: 101 EVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGK 160
E Y +V C A L + KN G++ N +Y I+ + K+ W K
Sbjct: 737 ECLYQGMVSVYCRMDLPETAHHLLYHAEKN----GIILDNDISVYIDIVETYGKLKIWQK 792
Query: 161 CREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIR 220
+ +R D ++ + SG +A ++ M + G V + N +++
Sbjct: 793 AESLVGSLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMRDGPSPTVDSVNGLLQ 852
Query: 221 AVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVP 280
A+ V ++ V +E+++MG + S + ++ + G + E + M G P
Sbjct: 853 ALIVDRRLNELYVVIQELQDMGLKISKSSILLTLEAFAQAGNLFEVQKIYNGMKAAGYFP 912
Query: 281 DVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVW 337
+ Y R L ++ R++ + M E+G +P + +L+ + + + +++
Sbjct: 913 TMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQPDLQICNSILKLYLGIEDFKSMGIIY 972
Query: 338 KKMEELGCSPDEFAYNALV 356
+K+++ PDE YN L+
Sbjct: 973 QKIQDASLKPDEETYNTLI 991
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 119/282 (42%), Gaps = 20/282 (7%)
Query: 85 EAMGT-FNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKT 142
++MG + K+ + LK DE +Y L+ C + E L + +++G K
Sbjct: 966 KSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSL-MNKMRSLGLEP-----KL 1019
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
Y ++ + K + + E +EE+ G D Y + M SG KA L
Sbjct: 1020 DTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAI 1079
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
MK+ GI+ + + ++ + G S + A V + +R G + ++VI + G
Sbjct: 1080 MKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKGD 1139
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVM 319
+ L EM + G PD + CF R E E + L + + ++G D +
Sbjct: 1140 FKAGIEKLTEMKEAGIEPDHRIWTCFIRAATLSEGTNEAIVLLNALQDAGF----DLPIR 1195
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
LL++ V V + +E L D A+N LV+AL+D
Sbjct: 1196 LLKEKSE----SLVSEVDQCLERLEPVEDNAAFN-LVNALVD 1232
>gi|125544731|gb|EAY90870.1| hypothetical protein OsI_12477 [Oryza sativa Indica Group]
Length = 601
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 118/244 (48%), Gaps = 3/244 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y +L GW +M + + M V D+ ++ + G+ A +L +EM+
Sbjct: 198 YTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREME 257
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
++G + V+Y T+++ +G VD AMRV+ EMR GC P VT T++ C+ GR+
Sbjct: 258 RRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTYGTLVTAFCKAGRIS 317
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
+ Y L M ++G D Y FF EK ++ L L +RM E P + Y +++
Sbjct: 318 QGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQLEECLELMERMRECRCPPDLSIYNVVI 377
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
R + G + +W +ME SP + +V L+ +G+L A Y ++M +GL
Sbjct: 378 RLACKLGETKQAVALWNEMETNELSPGVDTFAIMVTGLVGQGVLVEACGYFKDMVGRGLF 437
Query: 382 AKPR 385
P+
Sbjct: 438 VAPQ 441
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 76/192 (39%), Gaps = 33/192 (17%)
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
K+G A +L +E++ + + + + Y ++ +D A V M+ P VV
Sbjct: 173 KTGHVAVAEQLVEELQPR-LPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVV 231
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIES 308
NT++ +GR +A+ + EM ++GC P+ ++Y
Sbjct: 232 VFNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSY----------------------- 268
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
L++ G G + V+ +M GC+PD Y LV A G +
Sbjct: 269 ---------TTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTYGTLVTAFCKAGRISQG 319
Query: 369 RKYDEEMFAKGL 380
++ + M +GL
Sbjct: 320 YEFLDVMAREGL 331
>gi|115436834|ref|NP_001043148.1| Os01g0506100 [Oryza sativa Japonica Group]
gi|56201661|dbj|BAD73125.1| leaf protein -like [Oryza sativa Japonica Group]
gi|113532679|dbj|BAF05062.1| Os01g0506100 [Oryza sativa Japonica Group]
gi|215717162|dbj|BAG95525.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 541
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 159/357 (44%), Gaps = 19/357 (5%)
Query: 36 SVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL-- 93
+ + +L F +W L+ P P A F + +RY A+ F L
Sbjct: 75 TAVSLLTSRGLFAAAWRLLLAPSPTP---PPLAAFAPLVRRYARLGRAPAALRAFQFLRR 131
Query: 94 --DEF----GLKDEVSYCNL-VDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYN 146
D + + S N+ VDALC+ H A EL + S E + YN
Sbjct: 132 HPDRYMAGGDIPAAASLLNMAVDALCKEGHPRAAVELFERWRREEPDSPPDE----RAYN 187
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++L GW + K + W EM GV + +Y ++ +C +P +A+ L EM+++
Sbjct: 188 ILLHGWSRAGRLDKVGKLWAEMRLAGVRPTVVTYGTLIEGLCVKRRPDQAIALLDEMREE 247
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
GI+ +++ N ++ A+ + A +V + G P++ T N+++ C++G + A
Sbjct: 248 GIEANLLTCNPIVYALAQAGRFQDAHKVLEKFPLYGVAPNISTFNSLVMGYCKHGDLAGA 307
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRK 323
+VL M ++G P TY+ FF K ++ + + +MI +G P TYV+L++
Sbjct: 308 SSVLKVMTERGISPTTRTYNYFFMTFAKNSDVESGMNFYSKMIGNGYSPDQLTYVLLVKM 367
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
R L V + ++M G PD L+ L + + A E+MF +G+
Sbjct: 368 LSRANRLELVVQMIQEMRTHGFEPDLATSTMLIHLLCRRHQFEEACAEFEDMFKRGI 424
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 101/236 (42%), Gaps = 17/236 (7%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQEL 123
P T+ + + ++A+ +++ E G++ + CN +V AL + +A ++
Sbjct: 216 PTVVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEANLLTCNPIVYALAQAGRFQDAHKV 275
Query: 124 C-----FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
+G N+ +N ++ G+ K + M +RG+
Sbjct: 276 LEKFPLYGVAPNIS-----------TFNSLVMGYCKHGDLAGASSVLKVMTERGISPTTR 324
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+Y+ + K+ + Y +M G D + Y +++ + + ++ +++ +EM
Sbjct: 325 TYNYFFMTFAKNSDVESGMNFYSKMIGNGYSPDQLTYVLLVKMLSRANRLELVVQMIQEM 384
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
R G +P + T +I LLC + EA A +M K+G VP ITY R L++
Sbjct: 385 RTHGFEPDLATSTMLIHLLCRRHQFEEACAEFEDMFKRGIVPQYITYQKLMRELKR 440
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 77/208 (37%), Gaps = 36/208 (17%)
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
++ +D +CK G P AV+L++ +++ E
Sbjct: 150 NMAVDALCKEGHPRAAVELFERWRRE---------------------------------E 176
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPRE 297
P N ++ GR+ + + AEM G P V+TY L +P +
Sbjct: 177 PDSPPDERAYNILLHGWSRAGRLDKVGKLWAEMRLAGVRPTVVTYGTLIEGLCVKRRPDQ 236
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ L D M E GI + T ++ + G + V +K G +P+ +N+LV
Sbjct: 237 AIALLDEMREEGIEANLLTCNPIVYALAQAGRFQDAHKVLEKFPLYGVAPNISTFNSLVM 296
Query: 358 ALIDKGMLDMARKYDEEMFAKGLSAKPR 385
G L A + M +G+S R
Sbjct: 297 GYCKHGDLAGASSVLKVMTERGISPTTR 324
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 175/382 (45%), Gaps = 31/382 (8%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
+T +Y++VI+ +F E D W LI +MK PN T+ + + EA
Sbjct: 700 YTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLK-PNSYTYGSIIGLLCRICKLAEA 758
Query: 87 MGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI- 144
F+++ G L D + Y LVD C+ + A + + EM+ I
Sbjct: 759 EEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFY------------EMHSRDIT 806
Query: 145 -----YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKL 199
Y I+ G+ ++ + + + EM RG+ D+ +++ M+ CK+G A ++
Sbjct: 807 PDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRV 866
Query: 200 YKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCE 259
+ M + G +VV Y T+I + +D A + EM ++G QP++ T N+++ LC+
Sbjct: 867 HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 926
Query: 260 NGRVREAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPK 313
+G + EA ++ E G D +TY +C ++K +EIL M+ G++P
Sbjct: 927 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL---TEMLGKGLQPT 983
Query: 314 MDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDE 373
+ T+ +L+ F G L + M G +P+ +N LV + L A +
Sbjct: 984 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYK 1043
Query: 374 EMFAKGLSAKPREELGTKLVQG 395
+M ++G+ +P + LV+G
Sbjct: 1044 DMCSRGV--EPDGKTYENLVKG 1063
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 171/400 (42%), Gaps = 39/400 (9%)
Query: 10 DWKRALEFFNW--------VETDC---HFTHTTDTYNSVIDILGKFFE------------ 46
D++ L+FF+W +E+ C H + ++ F+E
Sbjct: 523 DYRLVLDFFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTESFVQ 582
Query: 47 -FDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYC 105
FDL L++ KD S + F + F+ V ++ EA F K+ +GL V C
Sbjct: 583 FFDL---LVYTYKDWGS---DPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSC 636
Query: 106 NLVDA-LCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREF 164
N+ A L + + + F E VG V YN+++ ++ +
Sbjct: 637 NVYLARLSKDCNKTATAIIVFREFPEVGVCWNVAS-----YNIVIHFVCQLGRINEAHHL 691
Query: 165 WEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGV 224
M+ +G D+ SYS ++ C+ G+ K KL ++MK+KG+K + Y ++I +
Sbjct: 692 LLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCR 751
Query: 225 SEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
+ A + EM G P + T++ C+ G +R A EM + PDV+T
Sbjct: 752 ICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLT 811
Query: 285 YHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKME 341
Y F + E LF M+ G+ P + T+ L+ + + G ++ F V M
Sbjct: 812 YTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMI 871
Query: 342 ELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ GCSP+ Y L+D L +G LD A + EM+ GL
Sbjct: 872 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 911
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 149/322 (46%), Gaps = 10/322 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ + + + EA F+++ GL+ D +++ L++ C+ H+ +A
Sbjct: 807 PDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDA--- 863
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + ++ +G T Y ++ G K E EM K G+ ++ +Y+
Sbjct: 864 -FRVHNHMIQAGCSPNVVT--YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 920
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
++ +CKSG +AVKL E + G+ D V Y T++ A S +D A + EM G
Sbjct: 921 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGL 980
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKP-REILG 300
QP++VT N ++ C +G + + +L M KG P+ T++C + C+ +
Sbjct: 981 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATA 1040
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
++ M G+ P TY L++ ++ + ++++M+ G S Y+ L+
Sbjct: 1041 IYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFF 1100
Query: 361 DKGMLDMARKYDEEMFAKGLSA 382
+ AR+ ++M GL+A
Sbjct: 1101 KRKKFVEAREIFDQMRRDGLAA 1122
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 129/308 (41%), Gaps = 14/308 (4%)
Query: 6 CYANDWKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C A K A N ++ C + TY ++ID L K + D + L+H M
Sbjct: 855 CKAGHIKDAFRVHNHMIQAGC--SPNVVTYTTLIDGLCKEGDLDSANELLHEMW-KIGLQ 911
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
PN T+ + + + EA+ + + GL D V+Y L+DA C+ + +AQE+
Sbjct: 912 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 971
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
E G + +N+++ G+ + M +G+ + +++
Sbjct: 972 -LTEMLGKGLQPTI-----VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCL 1025
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ C A +YK+M +G++ D Y +++ + + A +++EM+ G
Sbjct: 1026 VKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGF 1085
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILG 300
SV T + +IK + + EA + +M + G D + F ++P I+
Sbjct: 1086 SVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVD 1145
Query: 301 LFDRMIES 308
D +IE+
Sbjct: 1146 PIDEIIEN 1153
>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 884
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 151/313 (48%), Gaps = 14/313 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQEL 123
P+ F + Y A + A + + FGL S C+ ++ L + + EA++L
Sbjct: 486 PSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDL 545
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ K + GL +NK + ++L G+FK+ W EM+ RG+ D ++S +
Sbjct: 546 LY---KMID-KGL-PVNKVA-FTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAF 599
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D + K+G +A + + EM KKG + YN++I + + A+++ REMR+ G
Sbjct: 600 IDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGL 659
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG--- 300
P + T N +I C+ GR++ A+ AEM G PD +TY+ K +++
Sbjct: 660 LPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADE 719
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA-- 358
++M SG P + TY + ++ F + + ++ +G P+ YN +++A
Sbjct: 720 FLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVC 779
Query: 359 --LIDKGMLDMAR 369
++D+ M+ A+
Sbjct: 780 TDMLDRAMVLTAK 792
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 157/355 (44%), Gaps = 45/355 (12%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQEL 123
P+ + I+ Y ++A+G + + + G K +++ ++ A C +V+EA+++
Sbjct: 311 PDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKI 370
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGV---------- 173
F + VG S V M YN ++ G+FK + +EEM +G+
Sbjct: 371 -FEGIQEVGLSPNVAM-----YNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNIL 424
Query: 174 -------------------------VKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
V D Y + + +C +G+ +A++ ++M +KG+
Sbjct: 425 VAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGM 484
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
VVA+N+VI A + D A + Y+ M G PS TC++++ L + GR++EA
Sbjct: 485 PPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARD 544
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFG 325
+L +M KG + + + K + G L+ M GI P + +
Sbjct: 545 LLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLS 604
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ G + + + +M + G P+ F YN+L+ L + G L A K + EM KGL
Sbjct: 605 KAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGL 659
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 8/218 (3%)
Query: 171 RGVVKD-----LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVS 225
RG+++D H+++I + C+ G A L M K + DV AYN +I A +
Sbjct: 267 RGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIR 326
Query: 226 EGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
A+ M + GC+PS++T +T+I C G V EA + + + G P+V Y
Sbjct: 327 GRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMY 386
Query: 286 HCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE 342
+ K R++ L++ M + GI P T+ +L+ ++G + +++
Sbjct: 387 NTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSL 446
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
PD Y+ V L G LD A ++ E+M KG+
Sbjct: 447 SSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGM 484
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 3/191 (1%)
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
++++++ M++ G++ A + + R + ++ R M G +P N +
Sbjct: 225 YESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRDGPRPCNHNFNIM 284
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIESGI 310
I C+ G +R A ++L MPK C PDV Y+ +R + + LG MI++G
Sbjct: 285 ILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGC 344
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
+P + T+ ++ F G + +++ ++E+G SP+ YN L+ + A
Sbjct: 345 KPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANM 404
Query: 371 YDEEMFAKGLS 381
EEM KG++
Sbjct: 405 LYEEMRDKGIA 415
>gi|115447913|ref|NP_001047736.1| Os02g0679200 [Oryza sativa Japonica Group]
gi|50253128|dbj|BAD29374.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537267|dbj|BAF09650.1| Os02g0679200 [Oryza sativa Japonica Group]
Length = 491
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 176/365 (48%), Gaps = 35/365 (9%)
Query: 55 HRMKDNPSSIPNHATFRIMFKRY-VTAHLVNEAMGTFNKLDEFG--LKDEVSYCNLVDAL 111
HR+ P TF I+F+R V+ + A+ F L +D + +L+DAL
Sbjct: 122 HRLAFTPR------TFPILFERLAVSQRRPDLAVRLFLSLHRSHRVAQDLPLFNSLLDAL 175
Query: 112 CEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKR 171
+ +H +A L + F+ V YN + GW ++ + + M +
Sbjct: 176 SKSRHAGKAASLVRALEQR--FTPDVV-----TYNTLADGWCRVKDTSRALDVLRLMVES 228
Query: 172 GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG-----IKMDVVAYNTVIRAVGVSE 226
G+ +Y+I + ++G+ A + +MKK+G K DVV+Y T++ +GV+
Sbjct: 229 GIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGLGVAG 288
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
++ A +V+ EM + GC PSV T N +I+++C+ G V +A V M KG VP+V+TY
Sbjct: 289 QLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMRVKGYVPNVVTYT 348
Query: 287 CFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM--- 340
R L +I L L +RM G P + TY +L+R G + +++KM
Sbjct: 349 VLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLDLFEKMSKG 408
Query: 341 EELGCSPDEFAYNALVDAL-IDKGMLDM--ARKYDEEMFAKGLSAKPREELGTKLVQG-G 396
EE C P++ YN ++ A+ + K DM A + EEM +G PR + +++ G
Sbjct: 409 EE--CLPNQDTYNIIISAMFMRKRAEDMVLAARMVEEMVDRGYL--PRRFMFNRVLNGLM 464
Query: 397 LDGEQ 401
L G Q
Sbjct: 465 LTGNQ 469
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 170/378 (44%), Gaps = 11/378 (2%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C D A+E + + + T+ ++I K D + L +M D+ S +P
Sbjct: 451 CRKGDLASAMELHREMARN-GVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDS-SVVP 508
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N TF +M + Y V +A ++++ + GL D +Y +L+ LC ++A+E
Sbjct: 509 NEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFV 568
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
N V +N + ++ G+ K + W+EM RGV DL S+++ +
Sbjct: 569 DDLENNC-----VVLNSFSL-TTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIV 622
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
K K L++EMK+KG+K D V + +I E + A+ + +M GC
Sbjct: 623 YAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCS 682
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI--LGLF 302
P+VVT +I LC++G + A + EM +P+ TY+CF L E+ +
Sbjct: 683 PNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVL 742
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
I G T+ L++ F + G ++ + + E G PD +Y+ +++ L
Sbjct: 743 HATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKV 802
Query: 363 GMLDMARKYDEEMFAKGL 380
G ++ A + EM KGL
Sbjct: 803 GDINKAFQLWNEMLYKGL 820
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 161/363 (44%), Gaps = 20/363 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + + ALE + + + HF + + + ++D L K D ++ L + + +P
Sbjct: 276 CRTEELEMALEMTDDMLS-LHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGE-LGMVP 333
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
N + + EA F + GL+ +EV+Y L+ +LC+ + +A LC
Sbjct: 334 NLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDA--LC 391
Query: 125 -FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + G V YN ++ G+ + + + R EM ++G+ SYS
Sbjct: 392 MFDRMREKGIRVTV-----YPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPL 446
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ +C+ G A++L++EM + G+ +V + T+I +D A R++ +M +
Sbjct: 447 IAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSV 506
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE----KPRE 297
P+ VT N +I+ C G VR+A+ + +M +G PD TY CL K +E
Sbjct: 507 VPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKE 566
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ D + + + + L+ F + G L + +W +M G D ++ +V
Sbjct: 567 FV---DDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVY 623
Query: 358 ALI 360
A +
Sbjct: 624 AAL 626
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 116/255 (45%), Gaps = 5/255 (1%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+Y +R + ++ R M+ +GV Y++ M +C++ + +AV++ M
Sbjct: 197 VYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSM 256
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
++GI D V Y T++ +E ++ A+ + +M + PSV +C+ ++ L + G +
Sbjct: 257 VERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHI 316
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVML 320
+A+ + + + G VP++ + L K RE LF M G+ P TY +L
Sbjct: 317 DKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAIL 376
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + G + ++ +M E G + YN+L++ AR EM KGL
Sbjct: 377 IHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGL 436
Query: 381 SAKPREELGTKLVQG 395
+ P + L+ G
Sbjct: 437 A--PSAASYSPLIAG 449
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 163/366 (44%), Gaps = 17/366 (4%)
Query: 23 TDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP---SSIPNHATFRIMFKRYVT 79
C F Y + I + D + L+ RM+ S++P + ++
Sbjct: 187 VQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVP----YNVLMYGLCR 242
Query: 80 AHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVE 138
+ V EA+ N + E G+ DEV+Y LV C + + A E+ + ++ F V
Sbjct: 243 NNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMT-DDMLSLHFVPSVA 301
Query: 139 MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK 198
+ + RG ++ C + + G+V +L + + +D +CK + +A +
Sbjct: 302 SCSFMVDGLRKRGHIDKAFRLAC-----HLGELGMVPNLFACNALIDKLCKDRRFREAER 356
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
L++ M +G++ + V Y +I ++ +D A+ ++ MRE G + +V N++I C
Sbjct: 357 LFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYC 416
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMD 315
++ +A +L EM +KG P +Y L + ++ + L M +G+ +
Sbjct: 417 QHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVY 476
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
T+ L+ F + G + ++ KM + P+E +N +++ G + A + ++M
Sbjct: 477 TFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQM 536
Query: 376 FAKGLS 381
+GL+
Sbjct: 537 VDRGLT 542
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 82/194 (42%), Gaps = 5/194 (2%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A L+ EM + +D Y IRA +D A + M G + S V N ++
Sbjct: 179 ARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMY 238
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRP 312
LC N RV EA V M ++G V D +TY + E+ L + D M+ P
Sbjct: 239 GLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVP 298
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
+ + ++ + G + F + + ELG P+ FA NAL+D L A +
Sbjct: 299 SVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLF 358
Query: 373 EEMFAKGLSAKPRE 386
M +GL +P E
Sbjct: 359 RGMANRGL--EPNE 370
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 4/161 (2%)
Query: 165 WEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGV 224
W++M G ++ +Y++ ++ +CKSG A L +EM + YN + +
Sbjct: 673 WDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLAN 732
Query: 225 SEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
++ A ++ + E GC + VT NT+IK C+ G+++ A ++ + G PD I+
Sbjct: 733 EGELEKAKVLHATILE-GCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCIS 791
Query: 285 YHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLR 322
Y L K +I L++ M+ G++P + Y +L+R
Sbjct: 792 YSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIR 832
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 97/202 (48%), Gaps = 8/202 (3%)
Query: 90 FNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
F ++ E G+K D V + ++D + +++++A C+ + G S V Y ++
Sbjct: 638 FREMKEKGVKPDNVFHTCMIDVHSKEENIVQALN-CWDKMIADGCSPNV-----VTYTVL 691
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ K + + EEM + + +Y+ ++D + G+ KA L+ + + G
Sbjct: 692 INHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATILE-GC 750
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ V +NT+I+ + + A+ + + E G P ++ +T+I LC+ G + +A+
Sbjct: 751 LANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQ 810
Query: 269 VLAEMPKKGCVPDVITYHCFFR 290
+ EM KG PD++ Y+ R
Sbjct: 811 LWNEMLYKGLKPDIVAYNILIR 832
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 28/165 (16%)
Query: 102 VSYCNLVDALCEYKHVIEAQELC------------FGENKNVGF-SGLVEMNKTKI---- 144
V+Y L++ LC+ ++ AQ LC F N + F + E+ K K+
Sbjct: 686 VTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHAT 745
Query: 145 -----------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
+N +++G+ K + + + G D SYS ++ +CK G
Sbjct: 746 ILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDI 805
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
KA +L+ EM KG+K D+VAYN +IR + D + +Y +M
Sbjct: 806 NKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDM 850
>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Glycine max]
Length = 678
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 151/322 (46%), Gaps = 12/322 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHV-IEAQE 122
P ++ F ++ V + E F L + G+K + +Y L++ L YK+ E +
Sbjct: 357 PGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVL--YKNEWREEGD 414
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+G+ + G ++ YNMI+ + + E + +M RGVV +L +++
Sbjct: 415 RVYGQLISDGL-----ISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNT 469
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ CK G KA KL + + + G+K D+ +++++ + + + A+ + EM E G
Sbjct: 470 LINGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWG 529
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC---LEKPREIL 299
P+ V N +I+ LC G V + +L M K+G PD +Y+ + + K +
Sbjct: 530 INPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAK 589
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
LFD M SG+ P TY + G L ++ ME GCSPD + N ++ L
Sbjct: 590 KLFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKIL 649
Query: 360 IDKGMLDMARKYDEEMFAKGLS 381
+ + ++ A+ E KG+S
Sbjct: 650 VQQEYVEEAQNIIERCRQKGIS 671
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 184/430 (42%), Gaps = 78/430 (18%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSW-------------------NLIH------------ 55
+ TT YN++ID L K DL++ LIH
Sbjct: 175 LSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEAL 234
Query: 56 ----RMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLV-- 108
+MKD PN T+ ++ + + A V+EA G F + + G+ +E + LV
Sbjct: 235 RLVRQMKDK-GHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHG 293
Query: 109 -----------DALCEYKHVIEAQE------------LCFGEN-----------KNVGFS 134
+ L E+ + QE C N + +G
Sbjct: 294 VFRCVDPSKALELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVLGRG 353
Query: 135 GLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPW 194
G N ++N+++ K + + + +E + K+GV + +Y ++++ K+
Sbjct: 354 GYFPGN--SVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWRE 411
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
+ ++Y ++ G+ +V +YN +I ++ +D A +R+M+ G P++VT NT+I
Sbjct: 412 EGDRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLI 471
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIR 311
C++G + +A +L + + G PD+ T+ L ++ E L F MIE GI
Sbjct: 472 NGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGIN 531
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
P Y +L+R G + + ++M++ G SPD ++YNAL+ ++ A+K
Sbjct: 532 PNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKL 591
Query: 372 DEEMFAKGLS 381
+ M GL+
Sbjct: 592 FDSMSRSGLN 601
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 5/164 (3%)
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
+L W ++ + ++ G+ Y+ +D + KS A +++M
Sbjct: 150 LLASWGRLGLANYSAHVFCQISFLGLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADN 209
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
D YNT+I V VD A+R+ R+M++ G P+V T +I+ C RV EA+
Sbjct: 210 CVADRFTYNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAF 269
Query: 268 AVLAEMPKKGCVPDVIT----YHCFFRCLEKPREILGLFDRMIE 307
V M G P+ T H FRC++ P + L L ++
Sbjct: 270 GVFETMKDSGVYPNEATVRALVHGVFRCVD-PSKALELLSEFLD 312
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 3/178 (1%)
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
+ + + G +V L +E++ G ++ ++ + G +++ V+ ++ +G
Sbjct: 117 NTLHRKGPALLSVDLLRELRNLGFRVTEDLLCALLASWGRLGLANYSAHVFCQISFLGLS 176
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGL 301
P+ N +I L ++ + AY +M CV D TY+ + K E L L
Sbjct: 177 PTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEALRL 236
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+M + G P + TY ML+ F + F V++ M++ G P+E ALV +
Sbjct: 237 VRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGV 294
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 35/74 (47%)
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G R D LL +GR G V+ ++ LG SP YNAL+DAL+ +D+A
Sbjct: 139 GFRVTEDLLCALLASWGRLGLANYSAHVFCQISFLGLSPTTRLYNALIDALVKSNSIDLA 198
Query: 369 RKYDEEMFAKGLSA 382
++M A A
Sbjct: 199 YLKFQQMAADNCVA 212
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 177/388 (45%), Gaps = 22/388 (5%)
Query: 13 RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT--F 70
+AL FF WVE FTH +Y +I+ILG+ + + N + ++ F
Sbjct: 110 KALHFFRWVEAK-GFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFF 168
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENK 129
+ + Y A L E++ F + E G+ V ++ +L+ + + A++L
Sbjct: 169 NSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLD 228
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
G + T +N+++RG+ S + F++EM + D+ +Y+ +D +C+
Sbjct: 229 TYGVT-----PDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCR 283
Query: 190 SGKPWKAVKLYKEMKKKGIKM--DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
+GK A + K M KK + +VV Y T+IR + + + A+ + EM G +P+
Sbjct: 284 AGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNK 343
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGC-VPDVITYHCFFRC---LEKPREILGLFD 303
+T NT+I+ LCE ++ + +L M G +PD T + + + K E +F+
Sbjct: 344 ITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFE 403
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE-------LGCSPDEFAYNALV 356
+M E ++P TY +L+R + G R + ++ E +GC P AYN +
Sbjct: 404 KMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMF 463
Query: 357 DALIDKGMLDMARKYDEEMFAKGLSAKP 384
+ L G A + ++ +G P
Sbjct: 464 EYLCSNGKTKKAERVFRQLMKRGTQDPP 491
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 152/357 (42%), Gaps = 19/357 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+NS++ I+ K ++ L M D P+ TF I+ + + +V+E F +
Sbjct: 202 TFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKE 261
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGE-NKNVGFSGLVEMNKTKIYNMILR 150
+ F D V+Y LVD LC V A + G K+ S V Y ++R
Sbjct: 262 MSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNV-----VTYTTLIR 316
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM-KKKGIK 209
G+ + EM RG+ + +Y+ + +C++ K K ++ + M G
Sbjct: 317 GYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFI 376
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
D NT+I+A ++ A V+ +M E+ QP T + +++ LC+ G R A
Sbjct: 377 PDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEF 436
Query: 270 LAEMPKK-------GCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVM 319
E+ +K GC P V Y+ F L K ++ +F ++++ G + +Y
Sbjct: 437 FDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDP-PSYKT 495
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
L+ R G F + M PD Y ++D L+ KG +A K E+M
Sbjct: 496 LILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKML 552
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 150/338 (44%), Gaps = 43/338 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
TYN+++D L + + ++ N++ M K +P+ PN T+ + + Y + EA+
Sbjct: 273 TYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLA 332
Query: 92 KLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
++ GLK ++++Y L+ LCE + + + +E+ G + GF + T N +++
Sbjct: 333 EMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGF-----IPDTCTLNTLIK 387
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
M + +E+M + V D +YS+ + +C+ G +A + + E+ +K I +
Sbjct: 388 AHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILL 447
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
++GC+P V N + + LC NG+ ++A V
Sbjct: 448 ----------------------------HDVGCKPLVAAYNPMFEYLCSNGKTKKAERVF 479
Query: 271 AEMPKKGCVPDVITYHCFF--RCLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
++ K+G D +Y C E P L M+ P +TY +++ +
Sbjct: 480 RQLMKRG-TQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKK 538
Query: 328 GFLRPVFV--VWKKMEELGCSPDEFAYNALVDALIDKG 363
G PV +KM + P +++++ AL++KG
Sbjct: 539 G--DPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKG 574
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 7/210 (3%)
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMR-VYREMREMGCQPSVVT-- 249
P KA+ ++ ++ KG + +Y +I +G S ++ A V+ ++ G +
Sbjct: 108 PAKALHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRF 167
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR-CLEKPREILG--LFDRMI 306
N++I+ G +E+ V M + G P V+T++ L++ R + LFD M+
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227
Query: 307 ES-GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
++ G+ P T+ +L+R F + F +K+M C PD YN LVD L G +
Sbjct: 228 DTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKV 287
Query: 366 DMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+A + M K + P T L++G
Sbjct: 288 KIAHNVVKGMVKKSPNLSPNVVTYTTLIRG 317
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 139/303 (45%), Gaps = 10/303 (3%)
Query: 83 VNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
V+EA+G KL FG + D VSY ++ LC K + +EL E V + +
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEEL-MDEMVRVDCAPNIVTFN 255
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
T I + G F+ + E +M + G D+ Y+ +D +CK G A ++
Sbjct: 256 TLIGYLCRNGLFE-----RVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILN 310
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
M G+K +VV YNTV++ + +E A + EM + C VT N ++ C+NG
Sbjct: 311 RMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNG 370
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYV 318
V +L +M GC+PDVITY K E + L M G +P +Y
Sbjct: 371 LVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYT 430
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
++L+ G + +M + GC P+ +N L++ L KG+++ A + ++M
Sbjct: 431 IVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN 490
Query: 379 GLS 381
G S
Sbjct: 491 GCS 493
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 140/311 (45%), Gaps = 20/311 (6%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQEL 123
PN TF + L ++ E G ++ Y ++D +C+ H+ A E+
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308
Query: 124 -----CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
+G NV YN +L+G W + E EM ++ D
Sbjct: 309 LNRMPSYGLKPNV-----------VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV 357
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+++I +D C++G + ++L ++M G DV+ Y TVI +D A+ + + M
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP--- 295
GC+P+ V+ V+K LC GR +A ++++M ++GC P+ +T++ L K
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
+ + L +M+ +G P + +Y ++ G+ G + M G SP+ Y+++
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537
Query: 356 VDALIDKGMLD 366
AL +G ++
Sbjct: 538 ACALSREGRVN 548
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 136/292 (46%), Gaps = 10/292 (3%)
Query: 97 GLKDEVSYCNLV-DALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKM 155
G + CNLV +A+CE V EA G + + F G E + YN +L+G
Sbjct: 176 GCTLDTGNCNLVLNAICEQGCVDEA----VGLLRKLAFFG-CEADIVS-YNAVLKGLCMA 229
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
WG E +EM + ++ +++ + +C++G + ++ +M + G D+ Y
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
T+I + ++ A + M G +P+VV NTV+K LC R +EA +L+EM +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349
Query: 276 KGCVPDVITYHCF--FRCLEKPRE-ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
K C D +T++ F C + ++ L ++M+ G P + TY ++ F + G +
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
++ K M GC P+ +Y ++ L G A + +M +G P
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 174/422 (41%), Gaps = 65/422 (15%)
Query: 6 CYANDWKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C A W E + V DC T+N++I L + F+ ++ +M ++
Sbjct: 227 CMAKRWGDVEELMDEMVRVDC--APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH-GCT 283
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ + + + A N++ +GLK + V Y ++ LC + EA+EL
Sbjct: 284 PDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEEL 343
Query: 124 CFGENKNVGFSGLVEMNKTK------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
L EM + +N+++ + + + E E+M G + D+
Sbjct: 344 ------------LSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV 391
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG--VDFAMRVY 235
+Y+ ++ CK G +AV L K M G K + V+Y V++ + S G VD A +
Sbjct: 392 ITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL-CSAGRWVD-AEELM 449
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP 295
+M + GC P+ VT NT+I LC+ G V +A +L +M GC PD+I+Y L K
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509
Query: 296 ---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL--------- 343
E L L + M+ GI P Y + R G + V ++ +++
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569
Query: 344 --------------------------GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
GC P+E Y L+ L +G+ A++ E+ +
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCS 629
Query: 378 KG 379
+G
Sbjct: 630 RG 631
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 131/283 (46%), Gaps = 23/283 (8%)
Query: 107 LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE 166
+V LC + +A E+ + F G + +Y++IL + + E
Sbjct: 117 VVRGLCTRGRIADALEVL----DEMSFKGCAPI--PPMYHVILEAACRSGGFRNSVRVLE 170
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
M +G D + ++ ++ +C+ G +AV L +++ G + D+V+YN V++ + +++
Sbjct: 171 AMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAK 230
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
+ EM + C P++VT NT+I LC NG + VLA+M + GC PD+ Y
Sbjct: 231 RWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYA 290
Query: 287 CFFR--CLEKPREILG-LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
C E E+ + +RM G++P + Y +L+ G R WK+ EEL
Sbjct: 291 TIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLK--GLCSAER-----WKEAEEL 343
Query: 344 -------GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
C D+ +N LVD G++D + E+M + G
Sbjct: 344 LSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 3/118 (2%)
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGL 301
P+ T V++ LC GR+ +A VL EM KGC P YH + R + +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ M G ++L G + + +K+ GC D +YNA++ L
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 139/303 (45%), Gaps = 10/303 (3%)
Query: 83 VNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
V+EA+G KL FG + D VSY ++ LC K + +EL E V + +
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEEL-MDEMVRVDCAPNIVTFN 255
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
T I + G F+ + E +M + G D+ Y+ +D +CK G A ++
Sbjct: 256 TLIGYLCRNGLFE-----RVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILN 310
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
M G+K +VV YNTV++ + +E A + EM + C VT N ++ C+NG
Sbjct: 311 RMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNG 370
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYV 318
V +L +M GC+PDVITY K E + L M G +P +Y
Sbjct: 371 LVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYT 430
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
++L+ G + +M + GC P+ +N L++ L KG+++ A + ++M
Sbjct: 431 IVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN 490
Query: 379 GLS 381
G S
Sbjct: 491 GCS 493
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 140/311 (45%), Gaps = 20/311 (6%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQEL 123
PN TF + L ++ E G ++ Y ++D +C+ H+ A E+
Sbjct: 249 PNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308
Query: 124 -----CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
+G NV YN +L+G W + E EM ++ D
Sbjct: 309 LNRMPSYGLKPNV-----------VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV 357
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+++I +D C++G + ++L ++M G DV+ Y TVI +D A+ + + M
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP--- 295
GC+P+ V+ V+K LC GR +A ++++M ++GC P+ +T++ L K
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477
Query: 296 REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
+ + L +M+ +G P + +Y ++ G+ G + M G SP+ Y+++
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537
Query: 356 VDALIDKGMLD 366
AL +G ++
Sbjct: 538 ACALSREGRVN 548
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 136/292 (46%), Gaps = 10/292 (3%)
Query: 97 GLKDEVSYCNLV-DALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKM 155
G + CNLV +A+CE V EA G + + F G E + YN +L+G
Sbjct: 176 GCTLDTGNCNLVLNAICEQGCVDEA----VGLLRKLAFFG-CEADIVS-YNAVLKGLCMA 229
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
WG E +EM + ++ +++ + +C++G + ++ +M + G D+ Y
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
T+I + ++ A + M G +P+VV NTV+K LC R +EA +L+EM +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349
Query: 276 KGCVPDVITYHCF--FRCLEKPRE-ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
K C D +T++ F C + ++ L ++M+ G P + TY ++ F + G +
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
++ K M GC P+ +Y ++ L G A + +M +G P
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 174/422 (41%), Gaps = 65/422 (15%)
Query: 6 CYANDWKRALEFFN-WVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C A W E + V DC T+N++I L + F+ ++ +M ++
Sbjct: 227 CMAKRWGDVEELMDEMVRVDC--APNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH-GCT 283
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ + + + A N++ +GLK + V Y ++ LC + EA+EL
Sbjct: 284 PDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEEL 343
Query: 124 CFGENKNVGFSGLVEMNKTK------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
L EM + +N+++ + + + E E+M G + D+
Sbjct: 344 ------------LSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV 391
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG--VDFAMRVY 235
+Y+ ++ CK G +AV L K M G K + V+Y V++ + S G VD A +
Sbjct: 392 ITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGL-CSAGRWVD-AEELM 449
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP 295
+M + GC P+ VT NT+I LC+ G V +A +L +M GC PD+I+Y L K
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509
Query: 296 ---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL--------- 343
E L L + M+ GI P Y + R G + V ++ +++
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569
Query: 344 --------------------------GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
GC P+E Y L+ L +G+ A++ E+ +
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCS 629
Query: 378 KG 379
+G
Sbjct: 630 RG 631
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 131/283 (46%), Gaps = 23/283 (8%)
Query: 107 LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE 166
+V LC + +A E+ + F G + +Y++IL + + E
Sbjct: 117 VVRGLCTRGRIADALEVL----DEMSFKGCAPI--PPMYHVILEAACRSGGFRNSVRVLE 170
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
M +G D + ++ ++ +C+ G +AV L +++ G + D+V+YN V++ + +++
Sbjct: 171 AMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAK 230
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
+ EM + C P++VT NT+I LC NG + VLA+M + GC PD+ Y
Sbjct: 231 RWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYA 290
Query: 287 CFFR--CLEKPREILG-LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
C E E+ + +RM G++P + Y +L+ G R WK+ EEL
Sbjct: 291 TIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLK--GLCSAER-----WKEAEEL 343
Query: 344 -------GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
C D+ +N LVD G++D + E+M + G
Sbjct: 344 LSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 3/118 (2%)
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGL 301
P+ T V++ LC GR+ +A VL EM KGC P YH + R + +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ M G ++L G + + +K+ GC D +YNA++ L
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 115/222 (51%), Gaps = 3/222 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y+ +L + + W R ++M +G + Y+ + +CK GK +A +L +EMK
Sbjct: 386 YSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMK 445
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+G K D+ YNT+I + ++ ++ A ++R + E G + +T NT+I L NGR +
Sbjct: 446 SQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQ 505
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
E + +EM GC DVI+Y+ + L K + + L + M+ GI+P +Y ML+
Sbjct: 506 EGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLI 565
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
+ + G +R + K+M G +PD YN L++ L G
Sbjct: 566 NELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVG 607
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 19/285 (6%)
Query: 102 VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKC 161
V+Y L+ LC + EA + L E+N + N ++RG +
Sbjct: 283 VTYGFLLQGLCRTRQADEACAM---------LGRLPEVNVV-MLNTVIRGCLTEGKLARA 332
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
E +E M +G D+H+YSI M +CK G+ AV++ EM++KG ++V Y+T++ +
Sbjct: 333 TELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHS 392
Query: 222 VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
+ D A + +M G + N +I LC++G++ +A ++ EM +GC PD
Sbjct: 393 FCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPD 452
Query: 282 VITYH------CFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFV 335
+ TY+ C +E+ I F +IE G+ TY L+ R G +
Sbjct: 453 ICTYNTMIYHLCNNDLMEEAEHI---FRNLIEEGVVANGITYNTLIHALLRNGRWQEGLR 509
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ +M GC D +YN L+ AL +G +D + EEM KG+
Sbjct: 510 LASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGI 554
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 117/273 (42%), Gaps = 34/273 (12%)
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
+ YN++L + + M + V ++ + +C+ G+ A+ L +
Sbjct: 143 RSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALLRG 202
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M + G D V Y TVI A+ GV A + EM MGC V T N ++ LC GR
Sbjct: 203 MARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGR 262
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE------ILG---------------- 300
VREA ++ M +GC+P V+TY + L + R+ +LG
Sbjct: 263 VREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNTVIRG 322
Query: 301 ------------LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
L++ M G P + TY +L+ + G + +MEE GC+P+
Sbjct: 323 CLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPN 382
Query: 349 EFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
Y+ L+ + GM D AR ++M AKG S
Sbjct: 383 IVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFS 415
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 126/306 (41%), Gaps = 50/306 (16%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F+ + YN +I L K + D + L+ MK P+ T+ M L+ EA
Sbjct: 414 FSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCK-PDICTYNTMIYHLCNNDLMEEA 472
Query: 87 MGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYN 146
F L E G V +G+ YN
Sbjct: 473 EHIFRNLIEEG---------------------------------VVANGIT-------YN 492
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++ + W + EM G D+ SY+ + +CK G +++ L +EM K
Sbjct: 493 TLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTK 552
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
GIK + +YN +I + + V A+ + +EM G P +VT NT+I LC+ G A
Sbjct: 553 GIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAA 612
Query: 267 YAVLAEMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVML 320
+L ++P + PD++TY HC R L+ +L D+ I GI P T+ M+
Sbjct: 613 LNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLL---DKAISGGIVPNERTWGMM 669
Query: 321 LRKFGR 326
++ F R
Sbjct: 670 VQNFVR 675
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 71/169 (42%), Gaps = 4/169 (2%)
Query: 195 KAVKLYKEMKKK-GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
+A+ L +M ++ + +YN V+ + ++ A+ +YR M P+ T
Sbjct: 124 RALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 183
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGI 310
+ LC GR +A A+L M + GCVPD + Y L E L D M+ G
Sbjct: 184 ARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGC 243
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
++T+ L+ G +R + +M GC P Y L+ L
Sbjct: 244 AADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGL 292
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 4/121 (3%)
Query: 266 AYAVLAEMPKKGCV-PDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLL 321
A +L +MP++ V P +Y+ L + + L L+ RM+ + P T+ +
Sbjct: 125 ALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 184
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
R R G + + M GC PD Y ++ AL+ +G + A +EM G +
Sbjct: 185 RALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCA 244
Query: 382 A 382
A
Sbjct: 245 A 245
>gi|225453152|ref|XP_002272930.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 502
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 181/393 (46%), Gaps = 19/393 (4%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A++FF W + H+ ++N V+D+LGK F FD W+ + MK + + ATF +
Sbjct: 104 AVKFFRWSGHQLNDNHSPYSWNLVVDMLGKNFLFDAMWDAVKSMKKQ--GLLSLATFASI 161
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
F YV A V EA+ TF+ ++++G +D V+ +L+ A+C ++A E +NV
Sbjct: 162 FSSYVIADRVREAIMTFDVMEQYGCPRDIVALNSLLSAICRDGRTVQAAEFL----RNV- 216
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEE--MDKRGVVKDLHSYSIYMDIMCKS 190
GL+ + Y ++L GW G R+ ++E MD ++ +Y +++ +
Sbjct: 217 -RGLIRPD-ADTYAILLEGWESEGNCGAARQTFDEMVMDIGWDPGNVSAYDSFLNALLHG 274
Query: 191 GKPWK-AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG-CQPSVV 248
+ A+K ++ M+ + + Y ++ + A +++ M C+P
Sbjct: 275 PDGRREAMKFFEIMRDRQCSPGMRFYRIGLQECVKTSDSKGAQLLWQTMLSRNICRPDTE 334
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRM 305
N++I L C + A +L EM G PD TY+ FR L + R E +F M
Sbjct: 335 MYNSMIALHCSCDNIVMARGMLDEMVCNGAFPDSETYNVLFRFLIRRRKLEEAFSIFSEM 394
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
+++ P + +R + G + VWK + E S E N LV L D +
Sbjct: 395 VQNECVPDLTNCNAAVRIYLDLGDVYKAIKVWKYIIENHDSGLEETGNLLVTGLRDHDRI 454
Query: 366 DMARKYDEEMFAKG--LSAKPREELGTKLVQGG 396
A KY ++M +G L++ +L LV+ G
Sbjct: 455 PEAVKYAKDMIVRGIKLTSSTLSKLKHALVEVG 487
>gi|225430658|ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial [Vitis vinifera]
gi|296085168|emb|CBI28663.3| unnamed protein product [Vitis vinifera]
Length = 454
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 168/375 (44%), Gaps = 19/375 (5%)
Query: 5 SCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKD-NPSS 63
SC N +L FFNW + + TT Y ++ L + +F W + H+M+ +P+
Sbjct: 85 SC-PNSGTESLRFFNWARSHLSYQPTTLEYEELLKTLARTKQFQPMWKIAHQMQTLSPTV 143
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKL-DEFGLKDEVS-YCNLVDALCEYKHVIEAQ 121
+ + + + + LV++A+ FNK + Y +L+ ALCE K+ A
Sbjct: 144 VSS------IIEEFGKHGLVDQAVEVFNKAKSALNCPQTIEVYNSLLFALCEVKYFHGAY 197
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
L + + G+ +T Y++++ GW + ++F EEM ++G +
Sbjct: 198 ALI----RRMIRKGVTPNKQT--YSVLVNGWCAAGKMKEAQDFLEEMSRKGFNPPVRGRD 251
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+ +D + +G A ++ ++M K+G DV N+++ A+ + +F + +Y ++ +
Sbjct: 252 LLVDGLLNAGYLEAAKEMVRKMTKEGCAPDVETLNSMLEAICKAGEAEFCIDIYNDVCRL 311
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI--- 298
G P+V T +I C+ GR+ EA+ +L + G P Y + L + +
Sbjct: 312 GVSPNVGTYKIMIPAACKEGRIDEAFRILHRSIEDGHRPFPSLYAPIIKALCRNGQFDDA 371
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
F M G P Y ML+ GR G +M EL +P ++ + D
Sbjct: 372 FCFFSDMKVKGHPPNRPVYTMLITMCGRGGRFVDAANYLVEMTELNLTPISRCFDMVTDG 431
Query: 359 LIDKGMLDMARKYDE 373
L + G D+ARK ++
Sbjct: 432 LKNCGKHDLARKIEQ 446
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 76/192 (39%), Gaps = 36/192 (18%)
Query: 192 KPWKAVKLYKEMKKKGIKMDVVA---YNTVIRAVGVSEGVDFAMRVYREMRE-MGCQPSV 247
K K ++ M K +M ++ +++I G VD A+ V+ + + + C ++
Sbjct: 118 KTLARTKQFQPMWKIAHQMQTLSPTVVSSIIEEFGKHGLVDQAVEVFNKAKSALNCPQTI 177
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIE 307
N+++ LCE AYA L RMI
Sbjct: 178 EVYNSLLFALCEVKYFHGAYA--------------------------------LIRRMIR 205
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
G+ P TY +L+ + G ++ ++M G +P + LVD L++ G L+
Sbjct: 206 KGVTPNKQTYSVLVNGWCAAGKMKEAQDFLEEMSRKGFNPPVRGRDLLVDGLLNAGYLEA 265
Query: 368 ARKYDEEMFAKG 379
A++ +M +G
Sbjct: 266 AKEMVRKMTKEG 277
>gi|255660962|gb|ACU25650.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 376
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 121/233 (51%), Gaps = 5/233 (2%)
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
SG VE + T Y +++ G+ K + K E +++G V D +YS ++ +CK
Sbjct: 88 SGFVEDSIT--YGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANL 145
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
+A+ + M K G K +V YNT+I + + + A+RV+REM M C P+++T NT+
Sbjct: 146 DRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCSPTIITYNTL 205
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGI 310
I LC+N EAY ++ E+ KG P VITY + CL+ K L L++++ G
Sbjct: 206 INGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGF 265
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
+P + + +L+ G ++ ++ M C+P+ ++N L++ G
Sbjct: 266 KPDVQMHNILIHGLCSVGKIQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDG 318
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 107/227 (47%), Gaps = 3/227 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+N+++RG F + WE M + G V+D +Y I + CK+G K++ + + +
Sbjct: 62 FNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAE 121
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+KG +D AY+ +I + +D A+ V M + GC+P+V NT+I L +
Sbjct: 122 QKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFE 181
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLL 321
+A V EM C P +ITY+ L K E L +++ G+ P + TY ML+
Sbjct: 182 DAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLM 241
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
+ + +W ++ G PD +N L+ L G + +A
Sbjct: 242 KGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKIQLA 288
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 113/255 (44%), Gaps = 6/255 (2%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+YN +L G+F+++ C E WE M G + + S++I M + +GK + + +++ M
Sbjct: 27 VYNAMLNGYFRVAKIKDCFELWEMMGSEGN-RSVSSFNIMMRGLFDNGKVDEVISIWELM 85
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
K+ G D + Y ++ + +D ++ V + G + +I LC+ +
Sbjct: 86 KESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANL 145
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVML 320
A +VL M K GC P+V Y+ L K + + +F M P + TY L
Sbjct: 146 DRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCSPTIITYNTL 205
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + + + K++ + G P Y+ L+ L ++ A + ++ +KG
Sbjct: 206 INGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGF 265
Query: 381 SAKPREELGTKLVQG 395
KP ++ L+ G
Sbjct: 266 --KPDVQMHNILIHG 278
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 80/148 (54%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G K +G+ +E+ +G+ + +YS+ M +C K +A++L+ ++
Sbjct: 202 YNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVT 261
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
KG K DV +N +I + + A+ +Y +M C P++V+ NT+++ ++G +R
Sbjct: 262 SKGFKPDVQMHNILIHGLCSVGKIQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIR 321
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL 292
A + A + + G PD+I+Y+ + L
Sbjct: 322 NALVIWARILRNGLEPDIISYNITLKGL 349
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 92/230 (40%), Gaps = 37/230 (16%)
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI----RAVGV-----------SEG----- 227
C+SG A ++YKE+ + + D V YN ++ R + SEG
Sbjct: 1 CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60
Query: 228 --------------VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
VD + ++ M+E G +T ++ C+NG + ++ VL
Sbjct: 61 SFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMA 120
Query: 274 PKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
+KG V D Y L K + L + + MI+SG +P + Y L+
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKF 180
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
V+++M + CSP YN L++ L M A +E+ KGL
Sbjct: 181 EDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGL 230
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 112/253 (44%), Gaps = 8/253 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
Y+++I+ L K D + ++++ M + PN + + A +A+ F +
Sbjct: 131 AYSAMINGLCKEANLDRALSVLNGMIKSGCK-PNVHVYNTLINGLAGASKFEDAIRVFRE 189
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + +Y L++ LC+ + EA L K + GL T Y+M+++G
Sbjct: 190 MGTMHCSPTIITYNTLINGLCKNEMFGEAYNLV----KELLDKGLDPGVIT--YSMLMKG 243
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + W ++ +G D+ ++I + +C GK A+ LY +M + +
Sbjct: 244 LCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKIQLALSLYFDMNRWKCAPN 303
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+V++NT++ + A+ ++ + G +P +++ N +K LC R+ +A L
Sbjct: 304 LVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLH 363
Query: 272 EMPKKGCVPDVIT 284
+ K V IT
Sbjct: 364 DAVTKKIVLTKIT 376
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 9/202 (4%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A+ ++ A+ F + T H + T TYN++I+ L K F ++NL+ + D P
Sbjct: 177 ASKFEDAIRVFREMGT-MHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLD-PGV 234
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFG 126
T+ ++ K H V A+ +N++ G K +V N L+ LC + A L F
Sbjct: 235 ITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKIQLALSLYFD 294
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
N+ LV +N ++ G++K W + + G+ D+ SY+I +
Sbjct: 295 MNRWKCAPNLVS------HNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKG 348
Query: 187 MCKSGKPWKAVKLYKEMKKKGI 208
+C + A+ + K I
Sbjct: 349 LCSCNRISDAILFLHDAVTKKI 370
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 165/370 (44%), Gaps = 15/370 (4%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
AL F + T TYN+VI L + + + + M + P+ TF +
Sbjct: 136 ALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRS-GWRPDAYTFNSL 194
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
Y + V+ A F+K+ G +D VSY L++ LCE + EA EL FGE
Sbjct: 195 IVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVEL-FGE----- 248
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
++ +Y +++G + M + G +Y+ +D C+ K
Sbjct: 249 ----MDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERK 304
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
+A ++ +EM +KG+ VV VI A + A+RV M+ GC+P+V T N
Sbjct: 305 AKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNA 364
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPREILGLFDRMIES-G 309
+++ C G+V +A +L +M G PD +TY+ R C++ E R++E G
Sbjct: 365 LVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDG 424
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
+ TY L+ + G ++ +E G P+ +N+L++ L G D+A
Sbjct: 425 LIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAW 484
Query: 370 KYDEEMFAKG 379
K+ E+M + G
Sbjct: 485 KFLEKMVSAG 494
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 133/321 (41%), Gaps = 22/321 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKD---NPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
TYN+++ + + L+++M+ NP ++ T+ ++ + + A
Sbjct: 361 TYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAV----TYNLLIRGQCIDGHIESAFRL 416
Query: 90 FNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
++ GL D+ +Y L++ALC+ +A L F + G + I +
Sbjct: 417 LRLMEGDGLIADQYTYNALINALCKDGRTDQACSL-FDSLETRGIKPNAVTFNSLINGLC 475
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
G ++W +F E+M G D ++YS +++ +CK + + EM +K +
Sbjct: 476 KSGKADIAW-----KFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDV 530
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
K V Y VI + R + EM GC P VVT T ++ C GR+ EA
Sbjct: 531 KPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAEN 590
Query: 269 VLAEMPKKGCVPDVITYHCFF---RCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
VL EM K G D + Y+ + + + + +M P TY +LLR
Sbjct: 591 VLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLV 650
Query: 326 RWGFLRPVFV-----VWKKME 341
R + V VWK +E
Sbjct: 651 RMRLVEDVLPLTPAGVWKAIE 671
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 118/241 (48%), Gaps = 7/241 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+N ++ G+ + + R+ +++M RG +D+ SY+ ++ +C++G+ +AV+L+ EM
Sbjct: 191 FNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD 250
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+ + M Y +++ + +E + + + R M+E+G +PS V+ C + +
Sbjct: 251 QPDMHM----YAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAK 306
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGIRPKMDTYVMLL 321
EA +L EM +KG P V+T C E + + L + + M G +P + TY L+
Sbjct: 307 EAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALV 366
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ F G + + KM G +PD YN L+ G ++ A + M GL
Sbjct: 367 QGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLI 426
Query: 382 A 382
A
Sbjct: 427 A 427
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 110/240 (45%), Gaps = 7/240 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++R + + + + M + G D ++++ + C++ + A L+ +M
Sbjct: 156 YNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP 215
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+G DVV+Y T+I + + +D A+ ++ EM QP + ++K LC R
Sbjct: 216 LRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD----QPDMHMYAALVKGLCNAERGE 271
Query: 265 EAYAVLAEMPKKGCVPDVITYHCF--FRCLE-KPREILGLFDRMIESGIRPKMDTYVMLL 321
E +L M + G P Y FRC E K +E + M E G+ P + T ++
Sbjct: 272 EGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVI 331
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ + G + V + M+ GC P+ + YNALV ++G + A +M A G++
Sbjct: 332 NAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVN 391
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 155/394 (39%), Gaps = 63/394 (15%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++I+ L K D + +L ++ PN TF + + + A K
Sbjct: 431 TYNALINALCKDGRTDQACSLFDSLETR-GIKPNAVTFNSLINGLCKSGKADIAWKFLEK 489
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGE-------NKNVGFSGLV-EMNKTK 143
+ G D +Y + ++ LC+ K E GE V ++ ++ ++ K +
Sbjct: 490 MVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSF-IGEMLQKDVKPSTVNYTIVIHKLLKER 548
Query: 144 IYNMILRGWFKMSWWG----------------------KCREFWEEMDKRGVVKDLHSYS 181
Y ++ R W +M G + EM K GV D +Y+
Sbjct: 549 NYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYN 608
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKG---------------IKMDVVAYNTVIRAVGVSE 226
MD G+ AV + K+M ++M +V + GV +
Sbjct: 609 TLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWK 668
Query: 227 GVDFA--MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
++ ++ M++ P+ T +++++ E+GR EA ++++ M + +
Sbjct: 669 AIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDI 728
Query: 285 YHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKF---GRWGFLRPVFV--V 336
Y C K + L L MI+ G P++ +Y LL G+ + +F+
Sbjct: 729 YTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSR 788
Query: 337 WKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
WK SPDE + ++D LI KG D++R+
Sbjct: 789 WKDY-----SPDEIVWKVIIDGLIKKGHSDISRE 817
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 96/235 (40%), Gaps = 23/235 (9%)
Query: 30 TTDT--YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAM 87
T DT YN+++D + D + +++ +M + +S+PN T+ I+ + V LV + +
Sbjct: 601 TVDTMAYNTLMDGHASIGQTDHAVSILKQMT-SVASVPNQFTYFILLRHLVRMRLVEDVL 659
Query: 88 -----GTFNKL---DEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGEN-KNVGFSGLVE 138
G + + D FGL D + + Y ++E F E+ + + LV
Sbjct: 660 PLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEG----FSEDGRTEEATSLVS 715
Query: 139 MNKTK-------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSG 191
+ K IY ++ + K + M + G + L SY + + G
Sbjct: 716 LMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEG 775
Query: 192 KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+ KA +++ + K D + + +I + D + + + M C+PS
Sbjct: 776 QTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPS 830
>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g42310, mitochondrial; Flags: Precursor
gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 709
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 136/317 (42%), Gaps = 44/317 (13%)
Query: 102 VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKC 161
+ +++ AL + +EA+ L F E + G +T+ YN +L+G+ K
Sbjct: 305 ATLVSIISALADSGRTLEAEAL-FEELRQSGIKP-----RTRAYNALLKGYVKTGPLKDA 358
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGK----------------------------- 192
EM+KRGV D H+YS+ +D +G+
Sbjct: 359 ESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAG 418
Query: 193 -----PW-KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
W K ++ KEMK G+K D YN VI G +D AM + M G +P
Sbjct: 419 FRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPD 478
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFD 303
VT NT+I C++GR A + M ++GC+P TY+ E+ ++ L
Sbjct: 479 RVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLG 538
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
+M GI P + T+ L+ +G+ G ++M+ +G P YNAL++A +G
Sbjct: 539 KMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRG 598
Query: 364 MLDMARKYDEEMFAKGL 380
+ + A M + GL
Sbjct: 599 LSEQAVNAFRVMTSDGL 615
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 131/260 (50%), Gaps = 10/260 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ + ++ + + ++ AM TF+++ G++ D V++ L+D C++ I A+E+
Sbjct: 442 PDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEM 501
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ G + T YN+++ + W + +M +G++ ++ +++
Sbjct: 502 FEAMERR----GCLPCATT--YNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTL 555
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D+ KSG+ A++ +EMK G+K YN +I A + A+ +R M G
Sbjct: 556 VDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGL 615
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILG 300
+PS++ N++I E+ R EA+AVL M + G PDV+TY + L +K +++
Sbjct: 616 KPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPV 675
Query: 301 LFDRMIESGIRPKMDTYVML 320
+++ MI SG +P ML
Sbjct: 676 VYEEMIMSGCKPDRKARSML 695
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 141/348 (40%), Gaps = 33/348 (9%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALC------EYKHV 117
P + + K YV + +A +++++ G+ DE +Y L+DA + V
Sbjct: 337 PRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIV 396
Query: 118 IEAQELCFGENKNVGFSGLV-------EMNKT----------------KIYNMILRGWFK 154
++ E + + FS L+ E KT + YN+++ + K
Sbjct: 397 LKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGK 456
Query: 155 MSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVA 214
+ ++ M G+ D +++ +D CK G+ A ++++ M+++G
Sbjct: 457 FNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATT 516
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
YN +I + G E D R+ +M+ G P+VVT T++ + ++GR +A L EM
Sbjct: 517 YNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMK 576
Query: 275 KKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
G P Y+ + + + F M G++P + L+ FG
Sbjct: 577 SVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDA 636
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
F V + M+E G PD Y L+ ALI EEM G
Sbjct: 637 EAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSG 684
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 7/225 (3%)
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM--RVYR 236
+Y+ + ++ KA+ L +M++ G + D V Y+ VI+++ S +D M R+Y+
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYK 258
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE--- 293
E+ + V N +I ++G +A +L G T L
Sbjct: 259 EIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSG 318
Query: 294 KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
+ E LF+ + +SGI+P+ Y LL+ + + G L+ + +ME+ G SPDE Y+
Sbjct: 319 RTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYS 378
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLD 398
L+DA ++ G + AR +EM A + +P + ++L+ G D
Sbjct: 379 LLIDAYVNAGRWESARIVLKEMEAGDV--QPNSFVFSRLLAGFRD 421
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 11/200 (5%)
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
KSG P KA++L + G+ ++I A+ S A ++ E+R+ G +P
Sbjct: 280 AKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRT 339
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL------EKPREILGL 301
N ++K + G +++A ++++EM K+G PD TY E R +L
Sbjct: 340 RAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVL-- 397
Query: 302 FDRMIESG-IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+ +E+G ++P + LL F G + F V K+M+ +G PD YN ++D
Sbjct: 398 --KEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFG 455
Query: 361 DKGMLDMARKYDEEMFAKGL 380
LD A + M ++G+
Sbjct: 456 KFNCLDHAMTTFDRMLSEGI 475
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 167/376 (44%), Gaps = 22/376 (5%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNL---IHRMKDNPSSIPNHATFRIMFKRYVTAHLV 83
F T+T N ++ +L + + +W ++RM+ N TF IM +
Sbjct: 186 FYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKS----NVYTFNIMINVLCKEGKL 241
Query: 84 NEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKT 142
+A G ++ FG+K V+Y LV + IE L E K+ GF
Sbjct: 242 KKAKGFLGIMEVFGIKPTIVTYNTLVQGF-SLRGRIEGARLIISEMKSKGFQP-----DM 295
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
+ YN IL W M G+ E EM + G+V D SY+I + +G A E
Sbjct: 296 QTYNPIL-SW--MCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDE 352
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M K+G+ YNT+I + + ++ A + RE+RE G VT N +I C++G
Sbjct: 353 MVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGD 412
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVM 319
++A+A+ EM G P TY L K RE LF++++ G++P +
Sbjct: 413 AKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNT 472
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L+ G + F + K+M+ + +PD+ YN L+ L +G + AR+ EM +G
Sbjct: 473 LMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRG 532
Query: 380 LSAKPREELGTKLVQG 395
+ KP L+ G
Sbjct: 533 I--KPDHISYNTLISG 546
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 146/328 (44%), Gaps = 26/328 (7%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGEN 128
+ R +F V AH D K + + LV C+ + V EA E CF
Sbjct: 135 SIRNLFDELVLAH------------DRLETKSTILFDLLVRCCCQLRMVDEAIE-CFYLM 181
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
K GF KT+ N IL +++ F+ +M + + ++++++I ++++C
Sbjct: 182 KEKGF-----YPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLC 236
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
K GK KA M+ GIK +V YNT+++ + ++ A + EM+ G QP +
Sbjct: 237 KEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQ 296
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLF---DRM 305
T N ++ +C GR E VL EM + G VPD ++Y+ R ++ F D M
Sbjct: 297 TYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEM 353
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
++ G+ P TY L+ + ++ +++ E G D YN L++ G
Sbjct: 354 VKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDA 413
Query: 366 DMARKYDEEMFAKGLSAKPREELGTKLV 393
A +EM G+ +P + T L+
Sbjct: 414 KKAFALHDEMMTDGI--QPTQFTYTSLI 439
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 126/274 (45%), Gaps = 13/274 (4%)
Query: 96 FGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK-------IYNMI 148
F +DE+ +V Y +I F ENK L+ + K YN++
Sbjct: 347 FAYRDEMVKQGMVPTFYTYNTLIHG---LFMENKIEAAEILIREIREKGIVLDSVTYNIL 403
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G+ + K +EM G+ +Y+ + ++C+ K +A +L++++ KG+
Sbjct: 404 INGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGM 463
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
K D+V NT++ +D A + +EM M P VT N +++ LC G+ EA
Sbjct: 464 KPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARE 523
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREILGLF---DRMIESGIRPKMDTYVMLLRKFG 325
++ EM ++G PD I+Y+ K + F D M+ G P + TY LL+
Sbjct: 524 LMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLS 583
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+ + ++M+ G P++ ++ ++++A+
Sbjct: 584 KNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617
>gi|326524037|dbj|BAJ97029.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 599
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 165/375 (44%), Gaps = 16/375 (4%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
AL +F+W C + + S + +L K F + + PS + + + +
Sbjct: 77 ALGYFHW----CSPSLPSAPLPSSLALLAKCFSRASAAPCPSLLAPLPSHLLSASILSPV 132
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGF 133
+R ++ A+ + + +L+++L + HV A+ L +
Sbjct: 133 LRRLPPPRVLPFALSLLSSRPAH--DHPSLFLSLLESLSKTGHVAAAERLVEELQPRLPL 190
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
S + Y +L GW +++ + + M GV D+ ++ + G+
Sbjct: 191 S-------LRHYTALLYGWCRLAKLDEAKHVLARMKAAGVAPDVVVFNTLLAGFVADGRF 243
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
A +L +EM+++ + V+Y T+++ +G VD MRV+ EMR GC P VT T+
Sbjct: 244 EDAFELAREMERRDCPPNAVSYTTLMQGLGSKGRVDEVMRVFVEMRRKGCTPDSVTYGTL 303
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGI 310
+ C+ GR+ + Y L M + G D Y FF EK +++ L L +RM E
Sbjct: 304 VTAFCKAGRLSQGYEFLDSMSRDGLRVDPGVYLGFFVAHEKEQQLEECLELMERMRECRC 363
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
P ++ Y +++R + G + +W + E G SP + +V+ L+ +G L A
Sbjct: 364 PPDLNIYNVVIRLSCKLGETKQAIALWNETENSGLSPGVDTFAIMVNGLVGQGSLVDACN 423
Query: 371 YDEEMFAKGLSAKPR 385
Y ++M +GL P+
Sbjct: 424 YFKDMVGRGLFVAPQ 438
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 79/201 (39%), Gaps = 33/201 (16%)
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
K+G A +L +E++ + + + + Y ++ +D A V M+ G P VV
Sbjct: 170 KTGHVAAAERLVEELQPR-LPLSLRHYTALLYGWCRLAKLDEAKHVLARMKAAGVAPDVV 228
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIES 308
NT++ +GR +A+ + EM ++ C P+ ++Y
Sbjct: 229 VFNTLLAGFVADGRFEDAFELAREMERRDCPPNAVSY----------------------- 265
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
L++ G G + V V+ +M GC+PD Y LV A G L
Sbjct: 266 ---------TTLMQGLGSKGRVDEVMRVFVEMRRKGCTPDSVTYGTLVTAFCKAGRLSQG 316
Query: 369 RKYDEEMFAKGLSAKPREELG 389
++ + M GL P LG
Sbjct: 317 YEFLDSMSRDGLRVDPGVYLG 337
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 60/302 (19%), Positives = 120/302 (39%), Gaps = 43/302 (14%)
Query: 47 FDLSWNLIHRM--KDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVS 103
F+ ++ L M +D P PN ++ + + + V+E M F ++ G D V+
Sbjct: 243 FEDAFELAREMERRDCP---PNAVSYTTLMQGLGSKGRVDEVMRVFVEMRRKGCTPDSVT 299
Query: 104 YCNLVDALCEYKHVIEAQELCFGENKN---------VGFSGLVEMNKT------------ 142
Y LV A C+ + + E +++ +GF E +
Sbjct: 300 YGTLVTAFCKAGRLSQGYEFLDSMSRDGLRVDPGVYLGFFVAHEKEQQLEECLELMERMR 359
Query: 143 --------KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPW 194
IYN+++R K+ + W E + G+ + +++I ++ + G
Sbjct: 360 ECRCPPDLNIYNVVIRLSCKLGETKQAIALWNETENSGLSPGVDTFAIMVNGLVGQGSLV 419
Query: 195 KAVKLYKEMKKKG--IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
A +K+M +G + ++ A+ E ++ A V+ + GC+ +V
Sbjct: 420 DACNYFKDMVGRGLFVAPQYGVLKDLLNALVRDEKLELAKDVWGCIASRGCELNVSAWTI 479
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRP 312
I L V+EA + +M + G +P T+ + L+K L++R I + I
Sbjct: 480 WIHALYAKKHVKEACSYCLDMLEAGLMPQPDTFAKLMKGLKK------LYNRQIAAEITE 533
Query: 313 KM 314
K+
Sbjct: 534 KV 535
>gi|15217756|ref|NP_171744.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806504|sp|Q9FZ19.2|PPR5_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g02420
gi|332189307|gb|AEE27428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 161/335 (48%), Gaps = 19/335 (5%)
Query: 13 RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
+ LEF+ + F H++ + ++++ ILG+ +FD W L+ K S+ + T ++
Sbjct: 90 QTLEFYRYASAIRGFYHSSFSLDTMLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQV 149
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEF--GLKDEVSYCNLVDALCEYKHVIEAQELCFGENKN 130
+ R V + + +F K D + L+ LC+ K + +A +N
Sbjct: 150 VLGRVAKLCSVRQTVESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDA--------RN 201
Query: 131 VGFSGLVEMNK-TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
V S + + +N++L GW + F+EEM +G+ D+ +Y+ +D+ CK
Sbjct: 202 VYHSLKHQFQPDLQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCK 258
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
+ KA KL +M+++ DV+ Y TVI +G+ D A V +EM+E GC P V
Sbjct: 259 DREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAA 318
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG----LFDRM 305
N I+ C R+ +A ++ EM KKG P+ TY+ FFR L + LG L+ RM
Sbjct: 319 YNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLAND-LGRSWELYVRM 377
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
+ + P + + L++ F R + +W+ M
Sbjct: 378 LGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDM 412
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 77/174 (44%), Gaps = 7/174 (4%)
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
D +N ++R + + + A VY ++ QP + T N LL EA A
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNI---LLSGWKSSEEAEAFF 234
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
EM KG PDV+TY+ K REI L D+M E P + TY ++ G
Sbjct: 235 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 294
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G V K+M+E GC PD AYNA + L A K +EM KGLS
Sbjct: 295 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLS 348
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 93/225 (41%), Gaps = 42/225 (18%)
Query: 97 GLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKM 155
GLK D V+Y +L+D C+ + + +A +L + ++ Y ++ G +
Sbjct: 241 GLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVI------TYTTVIGGLGLI 294
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
K RE +EM + G D+ +Y+ + C + + A KL EM KKG+ + Y
Sbjct: 295 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 354
Query: 216 NTVIRAVGVS-----------------------------------EGVDFAMRVYREMRE 240
N R + ++ E VD AMR++ +M
Sbjct: 355 NLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVV 414
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
G + + ++ LLC+ +V EA L EM +KG P +++
Sbjct: 415 KGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSF 459
>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 176/420 (41%), Gaps = 55/420 (13%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP-NHATFRIMFKRYVTAHLVNE 85
F+HT DTY+S+ID L + FD +L+ ++ N S I F + + Y A
Sbjct: 45 FSHTYDTYHSIIDKLSRARAFDGVESLLSQLSRNSSHIKCGDDVFISVIRNYGLAGRPRL 104
Query: 86 AMGTFNKL-DEFGLKDEVSYCN-------------------------------------L 107
A+ TF ++ +EF ++ V N L
Sbjct: 105 ALKTFTRIKEEFSMQPSVKLLNTLLNVFVQNKRYHLVGSTLKNCKDKYGVLPNVFSFNIL 164
Query: 108 VDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEE 167
+ ALC+ K+ +E F E +G + Y IL G+ + + E
Sbjct: 165 IKALCK-KNDVENALKVFDEMPTMGM-----IPNLVTYTTILGGFVSRGDLVNAEKVFSE 218
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
+ +G + D +Y++ M CK G+ A+K+ M+ G++ + V Y +I A +
Sbjct: 219 ISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKK 278
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD--VITY 285
A + +M + PS C VI +LCE+G+V A + M +K C+PD +++
Sbjct: 279 SGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMST 338
Query: 286 HCFFRCLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
+ C E K E LFD E G P + TY L+ G L +W M E
Sbjct: 339 LIHWLCKEGKVWEARKLFDE-FEQGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKR 397
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG----GLDGE 400
C P+ F YN L+ + G++ + EEM G P + T L++G G++G+
Sbjct: 398 CRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNG--CLPNKSTYTLLIEGLQESGMEGD 455
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 163/357 (45%), Gaps = 11/357 (3%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
+ AL+ F ++ + + N+++++ + + L + + KD +PN +F
Sbjct: 103 RLALKTFTRIKEEFSMQPSVKLLNTLLNVFVQNKRYHLVGSTLKNCKDKYGVLPNVFSFN 162
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKN 130
I+ K + V A+ F+++ G+ + V+Y ++ ++ A+++ F E +
Sbjct: 163 ILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKV-FSEISD 221
Query: 131 VGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS 190
G+ + Y +++ G+ K + + M+ GV + +Y + +D CK
Sbjct: 222 KGW-----LPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKE 276
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTC 250
K +A L +M K VI + V+ A +++ M E C P
Sbjct: 277 KKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIM 336
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIE 307
+T+I LC+ G+V EA + E ++G +P ++TY+ + + E L+D M+E
Sbjct: 337 STLIHWLCKEGKVWEARKLFDEF-EQGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVE 395
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
RP TY ML++ F + G ++ + ++M + GC P++ Y L++ L + GM
Sbjct: 396 KRCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQESGM 452
>gi|9857539|gb|AAG00894.1|AC064879_12 Hypothetical protein [Arabidopsis thaliana]
Length = 490
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 161/335 (48%), Gaps = 19/335 (5%)
Query: 13 RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRI 72
+ LEF+ + F H++ + ++++ ILG+ +FD W L+ K S+ + T ++
Sbjct: 89 QTLEFYRYASAIRGFYHSSFSLDTMLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQV 148
Query: 73 MFKRYVTAHLVNEAMGTFNKLDEF--GLKDEVSYCNLVDALCEYKHVIEAQELCFGENKN 130
+ R V + + +F K D + L+ LC+ K + +A +N
Sbjct: 149 VLGRVAKLCSVRQTVESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDA--------RN 200
Query: 131 VGFSGLVEMNK-TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
V S + + +N++L GW + F+EEM +G+ D+ +Y+ +D+ CK
Sbjct: 201 VYHSLKHQFQPDLQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCK 257
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
+ KA KL +M+++ DV+ Y TVI +G+ D A V +EM+E GC P V
Sbjct: 258 DREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAA 317
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG----LFDRM 305
N I+ C R+ +A ++ EM KKG P+ TY+ FFR L + LG L+ RM
Sbjct: 318 YNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLAND-LGRSWELYVRM 376
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM 340
+ + P + + L++ F R + +W+ M
Sbjct: 377 LGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDM 411
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 77/174 (44%), Gaps = 7/174 (4%)
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
D +N ++R + + + A VY ++ QP + T N LL EA A
Sbjct: 178 DTACFNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNI---LLSGWKSSEEAEAFF 233
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
EM KG PDV+TY+ K REI L D+M E P + TY ++ G
Sbjct: 234 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 293
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G V K+M+E GC PD AYNA + L A K +EM KGLS
Sbjct: 294 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLS 347
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 93/225 (41%), Gaps = 42/225 (18%)
Query: 97 GLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKM 155
GLK D V+Y +L+D C+ + + +A +L + ++ Y ++ G +
Sbjct: 240 GLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVI------TYTTVIGGLGLI 293
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
K RE +EM + G D+ +Y+ + C + + A KL EM KKG+ + Y
Sbjct: 294 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 353
Query: 216 NTVIRAVGVS-----------------------------------EGVDFAMRVYREMRE 240
N R + ++ E VD AMR++ +M
Sbjct: 354 NLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVV 413
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
G + + ++ LLC+ +V EA L EM +KG P +++
Sbjct: 414 KGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSF 458
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 155/318 (48%), Gaps = 14/318 (4%)
Query: 83 VNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
+ EA+ K+ E G + D+++Y L+ C+ V E +L GE G
Sbjct: 507 MQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKL-RGEMVKQGIEP-----D 560
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
T YN+++ G ++ + W E R +V ++++Y + +D CK+ K + KL+
Sbjct: 561 TFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFT 620
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
E+ + ++++ V YNT+IRA + A +++ +MR G P+ T +++I +C G
Sbjct: 621 ELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIG 680
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFF--RC-LEKPREILGLFDRMIESGIRPKMDTYV 318
R+ +A ++ EM K+G +P+V+ Y C L + +++ + M I P TY
Sbjct: 681 RMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYT 740
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+++ + + G ++ + +M G PD YN L + +G ++ K + M +
Sbjct: 741 VMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQE 800
Query: 379 GLSAKPREELG-TKLVQG 395
GL P +E+ T LV G
Sbjct: 801 GL---PLDEITYTTLVHG 815
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 169/397 (42%), Gaps = 37/397 (9%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
K AL FF + C F T +Y ++ L + L+ R+ D
Sbjct: 93 KTALNFFYFASDSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDR--------KLP 144
Query: 72 IMFKRYVTAHL-VNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKN 130
++F H+ + AM N++ E G+ V A+ HV Q +N
Sbjct: 145 VLFGDPKNRHIEIASAMADLNEVGESGVA--------VAAVDLLIHVYCTQF------RN 190
Query: 131 VGFSGLVE----MNKTKIYNMILRGWFKMSWWGKCRE----FWE-EMDKRGVVKDLHSYS 181
VGF + + ++ + F +S K E +W E ++GV D++ +S
Sbjct: 191 VGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDVYLFS 250
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
++ CK GK A++L+ +M+K G+ +VV YN +I + +D A R +M +
Sbjct: 251 TAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKD 310
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI--- 298
G +++T + +I L + + EA +VL E +KG P+ + Y+ K +
Sbjct: 311 GVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDA 370
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
L + M+ GI P T +++ F + G + + ++M G S + A+ ++
Sbjct: 371 LRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHW 430
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
L + A ++ EM + + +P + L T LV G
Sbjct: 431 LCMNSRFESALRFLREMLLRNM--RPNDGLLTTLVGG 465
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 104/221 (47%), Gaps = 3/221 (1%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
E W + ++G +L + + + +CK+G +AV+L K+M ++G +D + YNT+I
Sbjct: 477 ELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGC 536
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
V+ ++ EM + G +P T N +I +C G++ EA + E + VP+V
Sbjct: 537 CKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNV 596
Query: 283 ITYHCFFR--C-LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
TY C +K E LF ++ + Y L+R + R G F +
Sbjct: 597 YTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDD 656
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
M G P Y++L+ + + G ++ A+ +EM +GL
Sbjct: 657 MRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGL 697
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 139/329 (42%), Gaps = 9/329 (2%)
Query: 54 IHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCE 113
+ R N P T + V A+ + ++ F + + D + ++A C+
Sbjct: 199 VFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDVYLFSTAINAFCK 258
Query: 114 YKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGV 173
V +A +L F K +G S V YN ++ G K + F E+M K GV
Sbjct: 259 GGKVEDAIQLFFDMEK-LGVSPNV-----VTYNNLIHGLCKHGNLDEAFRFKEKMVKDGV 312
Query: 174 VKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMR 233
L +YS+ ++ + K K +A + KE +KG + V YNT+I + A+R
Sbjct: 313 NATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALR 372
Query: 234 VYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG--CVPDVITYHCFFRC 291
+ +M G P+ VT N++I+ C+ G++ +A +L EM +G P T + C
Sbjct: 373 IRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLC 432
Query: 292 LEKPRE-ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF 350
+ E L M+ +RP L+ + G +W ++ E G +
Sbjct: 433 MNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLV 492
Query: 351 AYNALVDALIDKGMLDMARKYDEEMFAKG 379
NAL+ L G + A + ++M +G
Sbjct: 493 TTNALIHGLCKTGNMQEAVRLLKKMLERG 521
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 117/269 (43%), Gaps = 8/269 (2%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T TYN +I + + + D + NL + K +PN T+ +M Y A + E F
Sbjct: 561 TFTYNLLIHGMCRIGKLDEAVNLWNECKSR-DLVPNVYTYGVMIDGYCKADKIEEGEKLF 619
Query: 91 NKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+L L+ + V Y L+ A C + +EA F + ++ G+ T Y+ ++
Sbjct: 620 TELLTQNLELNSVVYNTLIRAYCRNGNTVEA----FKLHDDMRSKGIPPTTAT--YSSLI 673
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G + + +EM K G++ ++ Y+ + CK G+ K V + +EM I
Sbjct: 674 HGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIH 733
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
+ + Y +I S + A ++ EM G P VT N + C+ G++ E + +
Sbjct: 734 PNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKI 793
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREI 298
M ++G D ITY ++P +
Sbjct: 794 CDYMSQEGLPLDEITYTTLVHGWQQPSAL 822
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 168/397 (42%), Gaps = 38/397 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
TYN++I L K D ++ +M KD ++ T+ ++ + NEA
Sbjct: 283 TYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNA--TLITYSVLINGLMKLEKFNEANSVLK 340
Query: 92 KLDEFGL-KDEVSYCNLVDALCEYKHV-----IEAQELCFGENKNV--------GFSGLV 137
+ E G +EV Y L+D C+ ++ I + G N N GF +
Sbjct: 341 ETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIG 400
Query: 138 EMNKTK--IYNMILRG-------------WFKM-SWWGKCREFWEEMDKRGVVKDLHSYS 181
+M + + + M+ RG W M S + F EM R + + +
Sbjct: 401 QMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLT 460
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+ +CK GK AV+L+ + +KG ++V N +I + + + A+R+ ++M E
Sbjct: 461 TLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLER 520
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--C-LEKPREI 298
G +T NT+I C+ G+V E + + EM K+G PD TY+ C + K E
Sbjct: 521 GFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEA 580
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+ L++ + P + TY +++ + + + ++ ++ + YN L+ A
Sbjct: 581 VNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRA 640
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
G A K ++M +KG+ P + L+ G
Sbjct: 641 YCRNGNTVEAFKLHDDMRSKGIP--PTTATYSSLIHG 675
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 173/388 (44%), Gaps = 30/388 (7%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C+ + K+AL F + + F +Y ++I+ L K E L+ +++ + S P
Sbjct: 138 CFRGEIKKALYFHDQLVAQ-GFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGH-SVKP 195
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
+ + + L+ +A ++++ G+ D V+Y L+ C H+ EA
Sbjct: 196 DVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEA---- 251
Query: 125 FGENKNVGFSGLVEMNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
FS L EM I +N+++ K + + M K + D+
Sbjct: 252 --------FSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVF 303
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+Y+ +D + A ++ M ++G+ DV Y +I + ++ VD AM ++ EM
Sbjct: 304 TYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEM 363
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--C----L 292
+ P +VT N++I LC+N + A A+ M ++G PDV +Y C L
Sbjct: 364 KHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRL 423
Query: 293 EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
E +EI F R++ G + Y +L+ + + GF + KME+ GC PD +
Sbjct: 424 EDAKEI---FQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTF 480
Query: 353 NALVDALIDKGMLDMARKYDEEMFAKGL 380
+ ++ AL +K D A K EM A+GL
Sbjct: 481 DIIIRALFEKDENDKAEKILREMIARGL 508
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 151/335 (45%), Gaps = 14/335 (4%)
Query: 50 SWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLV 108
S+NL+ M+ P + F + V + F + + G+ D + L+
Sbjct: 44 SFNLMLLMRPPPPTF----HFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILI 99
Query: 109 DALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM 168
+ C H+ A + F GF T I + RG K + + F +++
Sbjct: 100 NCFCHQAHITLAFSV-FANILKRGFHPNAITLNTLIKGLCFRGEIKKALY-----FHDQL 153
Query: 169 DKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV 228
+G D SY ++ +CK+G+ +L ++++ +K DVV YNT+I ++ ++ +
Sbjct: 154 VAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLL 213
Query: 229 DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
A VY EM G P VVT T+I C G ++EA+++L EM K P+V T++
Sbjct: 214 GDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNIL 273
Query: 289 FRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
L K +E L M+++ I+P + TY L+ + ++ V+ M + G
Sbjct: 274 IDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGV 333
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+PD Y +++ L M+D A EEM K +
Sbjct: 334 TPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNM 368
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 83/184 (45%), Gaps = 5/184 (2%)
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
+N ++ ++ ++ + ++++ G P + T + +I C + A++V A +
Sbjct: 60 FNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANIL 119
Query: 275 KKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
K+G P+ IT + + L EI L D+++ G + +Y L+ + G +
Sbjct: 120 KRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETK 179
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTK 391
V + +K+E PD YN ++++L +L A EM KG+S P T
Sbjct: 180 AVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGIS--PDVVTYTT 237
Query: 392 LVQG 395
L+ G
Sbjct: 238 LIHG 241
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 79/189 (41%), Gaps = 3/189 (1%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
+ L+K+ + GI D+ + +I + A V+ + + G P+ +T NT+IK
Sbjct: 76 VISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIK 135
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE---ILGLFDRMIESGIRP 312
LC G +++A ++ +G D ++Y L K E + L ++ ++P
Sbjct: 136 GLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKP 195
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
+ Y ++ + L V+ +M G SPD Y L+ G L A
Sbjct: 196 DVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLL 255
Query: 373 EEMFAKGLS 381
EM K ++
Sbjct: 256 NEMKLKNIN 264
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 148/318 (46%), Gaps = 10/318 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQEL 123
P+ F + V+EA+ +++ E G K + N LV+ LC V +A L
Sbjct: 156 PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVL 215
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
GF + N+ Y +L K E +M++R + D YSI
Sbjct: 216 -IDRMVETGF----QPNEVT-YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSII 269
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D +CK G A L+ EM+ KG K D++ YNT+I + D ++ R+M +
Sbjct: 270 IDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKI 329
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILG 300
P+VVT + +I + G++REA +L EM ++G P+ ITY+ C E + E +
Sbjct: 330 SPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQ 389
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+ D MI G P + T+ +L+ + + + ++++M G + YN LV
Sbjct: 390 MVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFC 449
Query: 361 DKGMLDMARKYDEEMFAK 378
G L++A+K +EM ++
Sbjct: 450 QSGKLEVAKKLFQEMVSR 467
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 160/375 (42%), Gaps = 23/375 (6%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA--TFRIMFKRYVTAHLVNEAM 87
T +N + + K +++L L +M+ + H+ T IM + ++ A
Sbjct: 87 TVIDFNRLFSAIAKTKQYELVLALCKQMESKGIA---HSIYTLSIMINCFCRCRKLSYAF 143
Query: 88 GTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY- 145
T K+ + G + D V + L++ LC V EA EL +VEM
Sbjct: 144 STMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALEL---------VDRMVEMGHKPTLI 194
Query: 146 --NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
N ++ G + M + G + +Y +++MCKSG+ A++L ++M
Sbjct: 195 TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
+++ IK+D V Y+ +I + +D A ++ EM G + ++T NT+I C GR
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVML 320
+ +L +M K+ P+V+T+ K RE L M++ GI P TY L
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ F + L + M GC PD +N L++ +D + EM +G+
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Query: 381 SAKPREELGTKLVQG 395
A LVQG
Sbjct: 435 IANTVTY--NTLVQG 447
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 160/362 (44%), Gaps = 13/362 (3%)
Query: 13 RALEFFNWVETDCHFTH--TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATF 70
R E V+ H T T N++++ L + + LI RM + PN T+
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQ-PNEVTY 231
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENK 129
+ + AM K++E +K D V Y ++D LC+ + A L F E +
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNL-FNEME 290
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
GF + YN ++ G+ W + +M KR + ++ ++S+ +D K
Sbjct: 291 IKGFKADI-----ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVK 345
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
GK +A +L KEM ++GI + + YN++I ++ A+++ M GC P ++T
Sbjct: 346 EGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMT 405
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPREIL-GLFDRMI 306
N +I C+ R+ + + EM +G + + +TY+ + C E+ LF M+
Sbjct: 406 FNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMV 465
Query: 307 ESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
+RP + +Y +LL G L ++ K+E+ D Y ++ + + +D
Sbjct: 466 SRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVD 525
Query: 367 MA 368
A
Sbjct: 526 DA 527
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 129/276 (46%), Gaps = 19/276 (6%)
Query: 109 DALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM 168
DA+ ++ +I+++ L + N FS + KTK Y ++L ++M
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIA---KTKQYELVL-------------ALCKQM 114
Query: 169 DKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV 228
+ +G+ +++ SI ++ C+ K A ++ K G + D V +NT++ + + V
Sbjct: 115 ESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRV 174
Query: 229 DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
A+ + M EMG +P+++T NT++ LC NG+V +A ++ M + G P+ +TY
Sbjct: 175 SEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPV 234
Query: 289 FRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
+ K + + L +M E I+ Y +++ + G L F ++ +ME G
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 294
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
D YN L+ + G D K +M + +S
Sbjct: 295 KADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 134/315 (42%), Gaps = 32/315 (10%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A FN +E F TYN++I +D L+ M S P
Sbjct: 274 CKDGSLDNAFNLFNEMEIK-GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS-P 331
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL- 123
N TF ++ +V + EA ++ + G+ + ++Y +L+D C+ + EA ++
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 124 ----------------------CFGENKNVGFSGLVEMN------KTKIYNMILRGWFKM 155
C + G EM+ T YN +++G+ +
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 451
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
++ ++EM R V D+ SY I +D +C +G+ KA++++ +++K +++D+ Y
Sbjct: 452 GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIY 511
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
+I + + VD A ++ + G + N +I LC + +A + +M +
Sbjct: 512 MIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTE 571
Query: 276 KGCVPDVITYHCFFR 290
+G PD +TY+ R
Sbjct: 572 EGHAPDELTYNILIR 586
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 108/258 (41%), Gaps = 33/258 (12%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T TYNS+ID K + + ++ M P+ TF I+ Y A+ +++ + F
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCD-PDIMTFNILINGYCKANRIDDGLELF 426
Query: 91 NKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGE---------------------- 127
++ G + + V+Y LV C+ + A++L F E
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL-FQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 128 ----NKNVGFSGLVEMNKTK----IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
K + G +E +K + IY +I+ G S + + + +GV D +
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y+I + +C+ KA L+++M ++G D + YN +IRA + A + EM+
Sbjct: 546 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMK 605
Query: 240 EMGCQPSVVTCNTVIKLL 257
G V T VI +L
Sbjct: 606 SSGFPADVSTVKMVINML 623
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 184/444 (41%), Gaps = 75/444 (16%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDI----LGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
AL F+W + D NSVI I LGK + NL + ++++ S+ + +
Sbjct: 154 ALCAFDWFMKQKDYQSMLD--NSVIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVY-S 210
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGE-- 127
+ + + + EA+ F K++E G K L Y ++ FG+
Sbjct: 211 YTSLISAFANSGRYREAVNVFKKMEEEGCKP---------TLITYNVILN----VFGKMG 257
Query: 128 ---NKNVGFSGLVEMNKTK-------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
NK + LVE K+ YN ++ + S + + +EEM G D
Sbjct: 258 TPWNK---ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDK 314
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
+Y+ +D+ KS +P +A+K+ EM+ G +V YN++I A +D AM + +
Sbjct: 315 VTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQ 374
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR------- 290
M E G +P V T T++ G+V A + EM GC P++ T++ F +
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 291 -------------CLEKP------------------REILGLFDRMIESGIRPKMDTYVM 319
C P E+ G+F M +G P+ +T+
Sbjct: 435 FVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNT 494
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L+ + R G V+++M + G +PD YN ++ AL GM + + K EM +
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM--ED 552
Query: 380 LSAKPREELGTKLVQGGLDGEQSG 403
KP E L+ +G++ G
Sbjct: 553 GRCKPNELTYCSLLHAYANGKEIG 576
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 169/369 (45%), Gaps = 31/369 (8%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F+H TYN+++D+ GK + +++ M+ N S P+ T+ + Y +++EA
Sbjct: 310 FSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFS-PSIVTYNSLISAYARDGMLDEA 368
Query: 87 MGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVG-------FSGLVE 138
M N++ E G K +V +Y L+ E +E+ F E +N G F+ ++
Sbjct: 369 MELKNQMAEKGTKPDVFTYTTLLSGF-ERAGKVESAMNIFEEMRNAGCKPNICTFNAFIK 427
Query: 139 M--NKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKA 196
M N+ K +M+ + ++E++ G+ D+ +++ + + ++G +
Sbjct: 428 MYGNRGKFVDMM--------------KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEV 473
Query: 197 VKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKL 256
++KEMK+ G + +NT+I A + AM VYR M + G P + T NTV+
Sbjct: 474 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAA 533
Query: 257 LCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIE---SG-IRP 312
L G ++ VLAEM C P+ +TY +EI GL + E SG I P
Sbjct: 534 LARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEI-GLMHSLAEEVYSGVIEP 592
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
+ L+ + L + +++E G SPD N++V + M+ A +
Sbjct: 593 RAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVL 652
Query: 373 EEMFAKGLS 381
+ M +G +
Sbjct: 653 DYMKERGFT 661
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 133/295 (45%), Gaps = 11/295 (3%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F +T+N++I + F+ + + RM D P+ +T+ + + ++
Sbjct: 485 FVPERETFNTLISAYSRCGSFEQAMTVYRRMLD-AGVTPDLSTYNTVLAALARGGMWEQS 543
Query: 87 MGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
++++ K +E++YC+L+ A K + L +SG++E +
Sbjct: 544 EKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLA-----EEVYSGVIEPRAVLLK 598
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
++L K + + E+ +RG D+ + + + I + KA ++ MK+
Sbjct: 599 TLVLV-CSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKE 657
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+G + YN+++ S + + RE+ G +P +++ NTVI C N R+R+
Sbjct: 658 RGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRD 717
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTY 317
A + +EM G VPDVITY+ F E +G+ MI+ G RP +TY
Sbjct: 718 ASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTY 772
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 126/300 (42%), Gaps = 25/300 (8%)
Query: 1 RETLSCYANDWKRALEFFNWVET-----DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIH 55
RET + + + R F + D T TYN+V+ L + ++ S ++
Sbjct: 489 RETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLA 548
Query: 56 RMKDNPSSIPNHATFRIMFKRYVTA-------HLVNEAMGTFNKLDEFGLKDEVSYCNLV 108
M+D PN T+ + Y L E + LK V C+
Sbjct: 549 EMEDGRCK-PNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKC 607
Query: 109 DALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM 168
D L E E F E K GFS + N ++ + + GK E + M
Sbjct: 608 DLLPE-------AERAFSELKERGFSPDI-----TTLNSMVSIYGRRQMVGKANEVLDYM 655
Query: 169 DKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV 228
+RG + +Y+ M + +S K+ ++ +E+ KGIK D+++YNTVI A + +
Sbjct: 656 KERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRM 715
Query: 229 DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
A R++ EMR+ G P V+T NT I + EA V+ M K GC P+ TY+
Sbjct: 716 RDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSI 775
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 154/360 (42%), Gaps = 16/360 (4%)
Query: 25 CHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVN 84
C + T+N+++ + G+ D + + + +P TF + Y
Sbjct: 448 CGLSPDIVTWNTLLAVFGQN-GMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFE 506
Query: 85 EAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI 144
+AM + ++ + G+ ++S N V A + E E E ++ G + N+
Sbjct: 507 QAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED----GRCKPNEL-T 561
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC-KSGKPWKAVKLYKEM 203
Y +L + G EE+ GV++ + ++C K +A + + E+
Sbjct: 562 YCSLLHAYANGKEIGLMHSLAEEV-YSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL 620
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
K++G D+ N+++ G + V A V M+E G PS+ T N+++ + +
Sbjct: 621 KERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADF 680
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVML 320
++ +L E+ KG PD+I+Y+ + R+ +F M +SGI P + TY
Sbjct: 681 GKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTF 740
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + V + M + GC P++ YN++VD G + RK + ++F + L
Sbjct: 741 IGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVD-----GYCKLNRKDEAKLFVEDL 795
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 163/365 (44%), Gaps = 16/365 (4%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D K A++ ++ + D T+N +I L K D + RMK N + T
Sbjct: 234 DHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNERE-KDLYT 292
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEF-GLKDEVSYCNLVDALCEYKHVIEAQELCFGEN 128
+ + V++A FN+L E D V+Y ++ C + E+ EL
Sbjct: 293 YSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLEL----- 347
Query: 129 KNVGFSGLVEMNKTKI--YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
+ + + N I YN++++G + + W M +G D +Y I++
Sbjct: 348 ----WRIMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHG 403
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+C +G KA+ + +E++ KG +DV AY ++I + ++ A + +EM + G + +
Sbjct: 404 LCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELN 463
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFD 303
CN +I L + R+ +A ++ M K GC+P V++Y+ L K E
Sbjct: 464 SHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVK 523
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
M+E+G++P + TY +LL R + +W + + G PD +N L+ L G
Sbjct: 524 EMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVG 583
Query: 364 MLDMA 368
LD A
Sbjct: 584 KLDDA 588
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 160/340 (47%), Gaps = 19/340 (5%)
Query: 33 TYNSVIDIL---GKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
+YN +I L GK E + W R+ ++ T+ I VN+A+G
Sbjct: 361 SYNILIKGLLENGKIDEATMIW----RLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGV 416
Query: 90 FNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
+++ G D +Y +++D LC+ + + EA L K + G VE+N + + N +
Sbjct: 417 MQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLV----KEMSKHG-VELN-SHVCNAL 470
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G + S M K G + + SY+I + +C++GK +A KEM + G+
Sbjct: 471 IGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGL 530
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
K D+ Y+ ++ + ++ A+ ++ + + G +P V+ N +I LC G++ +A
Sbjct: 531 KPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMT 590
Query: 269 VLAEMPKKGCVPDVITYHC----FFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
V+A M + C +++TY+ +F+ + R + ++ M + G++P + +Y +L+
Sbjct: 591 VMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATV-IWGYMYKMGLQPDIISYNTILKGL 649
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
+ + G P + +N LV A++++ M
Sbjct: 650 CLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAVVNRKM 689
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 177/402 (44%), Gaps = 23/402 (5%)
Query: 4 LSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
+SC ++++A F NW+ + F +Y++VI+ L K + D + L M + +
Sbjct: 158 MSCKKKEFEKARGFLNWMWKE-GFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVA 216
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQEL 123
P+ + I+ ++ AM ++KL L+D Y N+ + +I
Sbjct: 217 -PDVTCYNILIDGFLKEKDHKMAMQLWDKL----LEDSSVYPNVK----THNIMISGLSK 267
Query: 124 CFGENKNVGFSGLVEMNKTK----IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
C + + ++ N+ + Y+ ++ G K + E+ +R D+ +
Sbjct: 268 CGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVT 327
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y+ + C+ GK ++++L++ M+++ +++V+YN +I+ + + +D A ++R M
Sbjct: 328 YNTMLGGFCRCGKIKESLELWRIMEQRN-SVNIVSYNILIKGLLENGKIDEATMIWRLMP 386
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR--- 296
G T I LC NG V +A V+ E+ KG DV Y CL K R
Sbjct: 387 AKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLE 446
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
E L M + G+ L+ R L ++ + M + GC P +YN L+
Sbjct: 447 EASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILI 506
Query: 357 DALIDKGMLDMARKYDEEMFAKGLSAKPREELGT-KLVQGGL 397
L + G A + +EM GL KP +L T ++ GGL
Sbjct: 507 CGLCEAGKFGEASAFVKEMLENGL--KP--DLKTYSILLGGL 544
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 165/377 (43%), Gaps = 14/377 (3%)
Query: 12 KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFR 71
+ A F+ + H+ Y+ ++ L + ++ ++
Sbjct: 24 RAAFALFDSATRHPGYAHSAVVYHHILRRLSEARMVTHVGRIVELIRSQECKCDEDVALS 83
Query: 72 IMFKRYVTAHLVNEAMGTFNKLDE-FGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENK 129
++ K Y + + A+ F ++ E FG + + SY L++A E K ++ + L F +
Sbjct: 84 VI-KTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESL-FAYFE 141
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
G + + YN++++ K + K R F M K G D+ SYS ++ + K
Sbjct: 142 TAGVAP-----NLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAK 196
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE-MGCQPSVV 248
+GK A++L+ EM ++ + DV YN +I + AM+++ ++ E P+V
Sbjct: 197 TGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVK 256
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRM 305
T N +I L + GRV + + M + D+ TY L + +F+ +
Sbjct: 257 THNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNEL 316
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
+E + TY +L F R G ++ +W+ ME+ S + +YN L+ L++ G +
Sbjct: 317 VERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRN-SVNIVSYNILIKGLLENGKI 375
Query: 366 DMARKYDEEMFAKGLSA 382
D A M AKG +A
Sbjct: 376 DEATMIWRLMPAKGYAA 392
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 161/357 (45%), Gaps = 21/357 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY S+I + DL++ + RM PN T+ + V+EA+ +
Sbjct: 235 TYTSLILGHCRNRNLDLAFGVFDRMVKEGCD-PNSVTYSTLINGLCNEGRVDEALDMLEE 293
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK------TKIYN 146
+ E G++ V Y + + LC E++ + M K + Y
Sbjct: 294 MIEKGIEPTV-----------YTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYT 342
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++ G ++ + +M K G+V + +Y+ ++ +C G+ A+K++ M+
Sbjct: 343 ALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGH 402
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
G + YN +I+ + + ++ AM ++ +M +MG P+VVT NT+I G V A
Sbjct: 403 GSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNA 462
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGL---FDRMIESGIRPKMDTYVMLLRK 323
+L M + GC PD TY+ K ++ F M+E G+ P +Y L+
Sbjct: 463 ARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDG 522
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ G + + K+MEE+GC+P+ +YNA+++ L + A K ++M +GL
Sbjct: 523 HSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGL 579
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 165/361 (45%), Gaps = 29/361 (8%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TYN++I+ L F + + H M+ + S+ N T+ + K + +AM
Sbjct: 372 NTVTYNALINELCVGGRFSTALKIFHWMEGH-GSLANTQTYNEIIKGLCLGGDIEKAMVL 430
Query: 90 FNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK----I 144
F K+ + G L V+Y L++ +V A L L++ N +
Sbjct: 431 FEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL----------DLMKENGCEPDEWT 480
Query: 145 YNMILRGWFKMSWWGKCRE---FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
YN ++ G+ K WGK +++EM + G+ + SY+ +D K GK A+ L K
Sbjct: 481 YNELVSGFSK---WGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLK 537
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
M++ G +V +YN VI + A ++ +M E G P+V+T T+I LC NG
Sbjct: 538 RMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNG 597
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFF--RCLE-KPREILGLFDRMIESGIRPKMDTYV 318
R + A+ + +M K+ C+P++ TY C E K E +RM E G P +DTY
Sbjct: 598 RTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYS 653
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
L+ R G + K M+E G PD Y +L+ A +D A K + AK
Sbjct: 654 TLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAK 713
Query: 379 G 379
G
Sbjct: 714 G 714
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 176/379 (46%), Gaps = 12/379 (3%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
+ +R +F N + + F + + N+++ L KF + + NL +M N P+ T
Sbjct: 143 EIRRVADFLNEI-SGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQML-NSGIQPSLLT 200
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGEN 128
F + V EA +++ ++ L +V +Y +L+ C +++ +L FG
Sbjct: 201 FNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNL----DLAFGVF 256
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
+ G + T Y+ ++ G + + EEM ++G+ +++Y++ + +C
Sbjct: 257 DRMVKEGCDPNSVT--YSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 314
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
+A++L MKK+G + +V Y +I + ++ A+ +Y +M + G P+ V
Sbjct: 315 AIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTV 374
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPRE-ILGLFDRM 305
T N +I LC GR A + M G + + TY+ + CL E + LF++M
Sbjct: 375 TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKM 434
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
++ G P + TY L+ + G + + M+E GC PDE+ YN LV G L
Sbjct: 435 LKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKL 494
Query: 366 DMARKYDEEMFAKGLSAKP 384
+ A Y +EM GL+ P
Sbjct: 495 ESASFYFQEMVECGLNPNP 513
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 187/410 (45%), Gaps = 41/410 (10%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSI 64
C + AL+ F+W+E +T TYN +I L + + + L +M K P +
Sbjct: 384 CVGGRFSTALKIFHWMEGHGSLANT-QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGP--L 440
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA--- 120
P T+ + Y+T VN A + + E G + DE +Y LV ++ + A
Sbjct: 441 PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFY 500
Query: 121 -QELC-FGENKN-VGFSGLVEMNK-----------------------TKIYNMILRGWFK 154
QE+ G N N V ++ L++ + + YN ++ G K
Sbjct: 501 FQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSK 560
Query: 155 MSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVA 214
+ + + + ++M ++G++ ++ +Y+ +D +C++G+ A K++ +M+K+ ++
Sbjct: 561 ENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 620
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
Y+++I + D A R M E+GC+P++ T +T++ LC GR EA ++ +M
Sbjct: 621 YSSLIYGLCQEGKADEAER----MSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMK 676
Query: 275 KKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
++G PD Y+ K E+ L +F + G + + Y L+ + G +
Sbjct: 677 ERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVE 736
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
++ M E + DE + LVD L+ +G LD+ K M +K +
Sbjct: 737 EAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFT 786
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
+ E+ G + + NT++ + E V+ A +Y++M G QPS++T NT+I
Sbjct: 146 RVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLI 205
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIES 308
+L + G+VREA +L+++ + PDV TY HC R L+ G+FDRM++
Sbjct: 206 NILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA---FGVFDRMVKE 262
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G P TY L+ G + + ++M E G P + Y + AL + A
Sbjct: 263 GCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEA 322
Query: 369 RKYDEEMFAKGLSAKPREELGTKLVQG 395
+ M +G +P + T L+ G
Sbjct: 323 IELVARMKKRG--CRPNVQTYTALISG 347
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 139/310 (44%), Gaps = 15/310 (4%)
Query: 23 TDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHL 82
+C +Y ++ID K + D++ +L+ RM++ + PN ++ + +
Sbjct: 505 VECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCN-PNVESYNAVINGLSKENR 563
Query: 83 VNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
+EA +K+ E GL + ++Y L+D LC A ++ K L
Sbjct: 564 FSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY---- 619
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
Y+ ++ G + GK E E M + G L +YS + +C+ G+ ++A +L K
Sbjct: 620 --TYSSLIYG---LCQEGKADE-AERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVK 673
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
+MK++G D Y +++ A + VD A++++ + G Q + +I LC+ G
Sbjct: 674 DMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAG 733
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYV 318
+V EA A+ M +K D I + L K E+ + L M P + TYV
Sbjct: 734 QVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYV 793
Query: 319 MLLRKFGRWG 328
+L R+ R G
Sbjct: 794 ILGRELSRIG 803
>gi|297727717|ref|NP_001176222.1| Os10g0495400 [Oryza sativa Japonica Group]
gi|255679525|dbj|BAH94950.1| Os10g0495400, partial [Oryza sativa Japonica Group]
Length = 438
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 141/310 (45%), Gaps = 8/310 (2%)
Query: 69 TFRIMFKRYVTAHLVNEAMG-TFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFG 126
TF + K ++AM ++ E +V C L+ LC+ EA EL
Sbjct: 132 TFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHM 191
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
+ G ++ Y ++ G+FK K + EM R + ++ +YS +
Sbjct: 192 MADDRGGGSPPDVVS---YTTVINGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAA 248
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+CK+ KA+++ M K G+ D + YN+++ S A+ ++MR G +P+
Sbjct: 249 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPN 308
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFD 303
VVT +++ LC+NGR EA + M K+G PD+ TY + E+ L D
Sbjct: 309 VVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLD 368
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
M+ +GI+P + +L+ + + + +V+ KM + G +P+ Y ++D L G
Sbjct: 369 LMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSG 428
Query: 364 MLDMARKYDE 373
+D A Y E
Sbjct: 429 SVDDAMLYFE 438
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 142/328 (43%), Gaps = 20/328 (6%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDE-VSYCNLVDALCEYKHVIEAQEL 123
P+ T+ I+ A ++ + + G + E +++ L+ LC K +A ++
Sbjct: 93 PDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDI 152
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM-DKRG--VVKDLHSY 180
+ L M ++L+G + + E M D RG D+ SY
Sbjct: 153 VLRR-----MTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 207
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+ ++ K G KA Y EM + I +VV Y+++I A+ ++ +D AM V M +
Sbjct: 208 TTVINGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVK 267
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF-------RCLE 293
G P +T N+++ C +G+ +EA L +M G P+V+TY RC E
Sbjct: 268 NGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTE 327
Query: 294 KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
+ +FD M + G+ P + TY LL+ + G L + + M G PD +N
Sbjct: 328 ARK----IFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFN 383
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGLS 381
L+ A + +D A +M GL+
Sbjct: 384 ILICAYAKQEKVDQAMLVFSKMRQHGLN 411
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 133/333 (39%), Gaps = 68/333 (20%)
Query: 126 GENKNVGFSGL--VEMNKTKIYNMILRGW------FKMSWWGKCRE-------FWEEMDK 170
G +++G +G E + + + LRGW F + R+ + M +
Sbjct: 26 GTTQDLGRAGGSGTEGARHVLDELPLRGWGASIYSFNRTLTDVARDSPAAAVSLFNRMAR 85
Query: 171 RG---VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
G V DL +YSI + C++G+ + KKG +++ + + +++ + +
Sbjct: 86 AGADEVTPDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKR 145
Query: 228 VDFAMR-VYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK---GCVPDVI 283
AM V R M E+ C P V +C ++K LC+ R +EA +L M G PDV+
Sbjct: 146 TSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVV 205
Query: 284 --------------------TYH---------------------CFFRCLEKPREILGLF 302
TYH C + ++K E+L
Sbjct: 206 SYTTVINGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAMEVL--- 262
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
+ M+++G+ P TY +L + G + KKM G P+ Y +L++ L
Sbjct: 263 NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYLCKN 322
Query: 363 GMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
G ARK + M +GL +P L+QG
Sbjct: 323 GRCTEARKIFDSMTKRGL--EPDIATYRTLLQG 353
>gi|242086476|ref|XP_002443663.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
gi|241944356|gb|EES17501.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
Length = 853
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 148/333 (44%), Gaps = 42/333 (12%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
+D AL FF W++ F H TY ++I ILG+ +F + L+ M P
Sbjct: 338 HDHTVALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVLKKLLDEM-SRAHCKPTVV 396
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE 127
T+ + Y A+ + EA+ F ++ E G + D V+YC L+D + ++ A +L +G
Sbjct: 397 TYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDL-YGR 455
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
+ VG S T Y+ ++ K + + EM + G +L +Y+I + +
Sbjct: 456 MQEVGLS-----PDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQ 510
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR-------- 239
K+ VKLYK+M+ G + D + Y+ V+ +G +D A V+ EMR
Sbjct: 511 AKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRRDWAPDEP 570
Query: 240 --------------------------EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
+ G QP+V TCN+++ + R ++AY VL M
Sbjct: 571 VYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYIVLQNM 630
Query: 274 PKKGCVPDVITYHCFFRCLEKPREILGLFDRMI 306
+G VP V TY C + + +GL +++
Sbjct: 631 LAQGLVPSVQTYTLLLSCCTEAQAQMGLCGQLM 663
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 3/209 (1%)
Query: 170 KRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVD 229
+ G D H+Y+ + I+ ++ + KL EM + K VV YN +I A G + +
Sbjct: 353 QPGFKHDGHTYTTMIGILGQARQFGVLKKLLDEMSRAHCKPTVVTYNRIIHAYGRANYLK 412
Query: 230 FAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF 289
A++V+ EM+E G +P VT T+I + + G + A + M + G PD TY
Sbjct: 413 EAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYSAMV 472
Query: 290 RCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCS 346
CL K ++ LF MIE+G P + TY +++ + V ++K M+ G
Sbjct: 473 NCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFR 532
Query: 347 PDEFAYNALVDALIDKGMLDMARKYDEEM 375
PD+ Y+ +++ L G LD A EM
Sbjct: 533 PDKITYSIVMEVLGHCGHLDEAEAVFIEM 561
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 16/245 (6%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN I+ + + ++ + + +EEM + G D +Y +DI K+G A+ LY M+
Sbjct: 398 YNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQ 457
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+ G+ D Y+ ++ +G + A +++ EM E GC P++VT N +I L +
Sbjct: 458 EVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYE 517
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGI---------RPKMD 315
+ +M G PD ITY E+LG + E+ P
Sbjct: 518 NVVKLYKDMQVAGFRPDKITYSIVM-------EVLGHCGHLDEAEAVFIEMRRDWAPDEP 570
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
Y +L+ +G+ G + ++ M + G P+ N+L+ A + A + M
Sbjct: 571 VYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYIVLQNM 630
Query: 376 FAKGL 380
A+GL
Sbjct: 631 LAQGL 635
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 5/147 (3%)
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE 297
+ + C+ N V+KLL ++ + L P G D TY L + R+
Sbjct: 318 LDNLHCKIDAFQANQVLKLLHDHTVALGFFQWLKRQP--GFKHDGHTYTTMIGILGQARQ 375
Query: 298 ---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
+ L D M + +P + TY ++ +GR +L+ V+++M+E G PD Y
Sbjct: 376 FGVLKKLLDEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCT 435
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLS 381
L+D G LD+A M GLS
Sbjct: 436 LIDIHAKAGYLDIAMDLYGRMQEVGLS 462
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 140/300 (46%), Gaps = 22/300 (7%)
Query: 90 FNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI---- 144
F+++ GL D V+Y +++ LC + EA++L L EM ++
Sbjct: 384 FDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKL------------LQEMWARRLDVDE 431
Query: 145 --YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
Y +++ G+ K + + M +RGV ++ +Y+ D +CK G A +L E
Sbjct: 432 VTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHE 491
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M KG++++ YN++I + + ++ AMR +M +P V T T+I LC++G
Sbjct: 492 MSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGD 551
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVM 319
+ A+++L EM KG P ++TY+ + G L D M+E I P TY
Sbjct: 552 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNS 611
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L++++ ++ ++K M P+E YN L+ + A + +EM KG
Sbjct: 612 LMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKG 671
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 136/318 (42%), Gaps = 11/318 (3%)
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCF 125
N ++ I+ K A V +A F+++ D V+Y L+ C + A +L
Sbjct: 258 NVCSYNILLKALCDAGRVKDARQLFDEM--ASAPDVVTYGILIHGHCALGELENAVKLL- 314
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
+ +G VE N T +Y ++ W E+M +R V+ D Y+ +
Sbjct: 315 ----DEMVAGGVEPNAT-VYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLS 369
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
C G A + + EM++KG+ D V Y T+I + + ++ A ++ +EM
Sbjct: 370 GFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDV 429
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LF 302
VT +I C+ G++ EA+ + M ++G P+V+TY L K ++ L
Sbjct: 430 DEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELL 489
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
M G+ TY L+ + G+L M+ PD + Y L+DAL
Sbjct: 490 HEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKS 549
Query: 363 GMLDMARKYDEEMFAKGL 380
G LD A +EM KG+
Sbjct: 550 GDLDRAHSLLQEMLDKGI 567
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 144/329 (43%), Gaps = 11/329 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY ++I+ L + E + + L+ M + + T+ ++ Y + EA N
Sbjct: 398 TYTTMINGLCRAVELEEAEKLLQEMWARRLDV-DEVTYTVLIDGYCKRGKMAEAFQMHNA 456
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + G+ + V+Y L D LC+ V A EL E N G E+N YN ++ G
Sbjct: 457 MVQRGVTPNVVTYTALTDGLCKQGDVQAANEL-LHEMSNKGL----ELNAC-TYNSLING 510
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
K + + +MD + D+++Y+ +D +CKSG +A L +EM KGIK
Sbjct: 511 LCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPT 570
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+V YN ++ +S V+ ++ M E P+ T N+++K C ++ +
Sbjct: 571 IVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYK 630
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M + P+ TY+ + K R E L D MI+ G R +Y L+R +
Sbjct: 631 GMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKK 690
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVD 357
++ M + G + + Y+ +D
Sbjct: 691 KFVEARELFHDMRKEGLTAESDVYDFYID 719
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 111/240 (46%), Gaps = 3/240 (1%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+Y +L G+ R +++EM ++G+ D +Y+ ++ +C++ + +A KL +EM
Sbjct: 363 LYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEM 422
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
+ + +D V Y +I + A +++ M + G P+VVT + LC+ G V
Sbjct: 423 WARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDV 482
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVML 320
+ A +L EM KG + TY+ L K + + M + ++P + TY L
Sbjct: 483 QAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTL 542
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + G L + ++M + G P YN L++ G ++ +K + M K +
Sbjct: 543 IDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNI 602
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 25/202 (12%)
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
++C P L + +++ GI A N V+ + + E ++ ++E+
Sbjct: 211 LLCLPSAP-----LLRRLRQYGISPSPEACNAVLSRLPLDEAIEL----FQELP----HK 257
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREIL 299
+V + N ++K LC+ GRV++A + EM PDV+TY HC LE +
Sbjct: 258 NVCSYNILLKALCDAGRVKDARQLFDEM---ASAPDVVTYGILIHGHCALGELEN---AV 311
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
L D M+ G+ P Y ++ G++ V + M + DE Y ++
Sbjct: 312 KLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGF 371
Query: 360 IDKGMLDMARKYDEEMFAKGLS 381
+KG L AR++ +EM KGL+
Sbjct: 372 CNKGDLVSARRWFDEMQRKGLA 393
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 95/216 (43%), Gaps = 11/216 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C A ++A+ ++T C TY ++ID L K + D + +L+ M D P
Sbjct: 512 CKAGYLEQAMRTMADMDTAC-LKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDK-GIKP 569
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELC 124
T+ ++ + + V + + E + + +Y +L+ C ++ E+
Sbjct: 570 TIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIY 629
Query: 125 FG-ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
G +++VG YN++++G K + F +EM ++G SYS
Sbjct: 630 KGMRSRDVG-------PNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSAL 682
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+ ++ K K +A +L+ +M+K+G+ + Y+ I
Sbjct: 683 IRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYI 718
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 177/388 (45%), Gaps = 22/388 (5%)
Query: 13 RALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT--F 70
+AL FF WVE FTH +Y +I+ILG+ + + N + ++ F
Sbjct: 110 KALHFFRWVEAK-GFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFF 168
Query: 71 RIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENK 129
+ + Y A L E++ F + E G+ V ++ +L+ + + A++L
Sbjct: 169 NSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLD 228
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
G + T +N+++RG+ S + F++EM + D+ +Y+ +D +C+
Sbjct: 229 TYGVT-----PDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCR 283
Query: 190 SGKPWKAVKLYKEMKKKGIKM--DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
+GK A + K M KK + +VV Y T+IR + + + A+ + EM G +P+
Sbjct: 284 AGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNK 343
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGC-VPDVITYHCFFRC---LEKPREILGLFD 303
+T NT+I+ LCE ++ + +L M G +PD T + + + K E +F+
Sbjct: 344 ITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFE 403
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE-------LGCSPDEFAYNALV 356
+M E ++P TY +L+R + G R + ++ E +GC P AYN +
Sbjct: 404 KMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMF 463
Query: 357 DALIDKGMLDMARKYDEEMFAKGLSAKP 384
+ L G A + ++ +G P
Sbjct: 464 EYLCSNGKTKKAERVFRQLMKRGTQDPP 491
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 152/357 (42%), Gaps = 19/357 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+NS++ I+ K ++ L M D P+ TF I+ + + +V+E F +
Sbjct: 202 TFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKE 261
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGE-NKNVGFSGLVEMNKTKIYNMILR 150
+ F D V+Y LVD LC V A + G K+ S V Y ++R
Sbjct: 262 MSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNV-----VTYTTLIR 316
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM-KKKGIK 209
G+ + EM RG+ + +Y+ + +C++ K K ++ + M G
Sbjct: 317 GYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFI 376
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
D NT+I+A ++ A V+ +M E+ QP T + +++ LC+ G R A
Sbjct: 377 PDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEF 436
Query: 270 LAEMPKK-------GCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVM 319
E+ +K GC P V Y+ F L K ++ +F ++++ G + +Y
Sbjct: 437 FDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDP-PSYKT 495
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
L+ R G F + M PD Y ++D L+ KG +A K E+M
Sbjct: 496 LILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKML 552
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 150/338 (44%), Gaps = 43/338 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
TYN+++D L + + ++ N++ M K +P+ PN T+ + + Y + EA+
Sbjct: 273 TYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLA 332
Query: 92 KLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
++ GLK ++++Y L+ LCE + + + +E+ G + GF + T N +++
Sbjct: 333 EMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGF-----IPDTCTLNTLIK 387
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
M + +E+M + V D +YS+ + +C+ G +A + + E+ +K I +
Sbjct: 388 AHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILL 447
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
++GC+P V N + + LC NG+ ++A V
Sbjct: 448 ----------------------------HDVGCKPLVAAYNPMFEYLCSNGKTKKAERVF 479
Query: 271 AEMPKKGCVPDVITYHCFF--RCLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
++ K+G D +Y C E P L M+ P +TY +++ +
Sbjct: 480 RQLMKRG-TQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKK 538
Query: 328 GFLRPVFV--VWKKMEELGCSPDEFAYNALVDALIDKG 363
G PV +KM + P +++++ AL++KG
Sbjct: 539 G--DPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKG 574
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 7/210 (3%)
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMR-VYREMREMGCQPSVVT-- 249
P KA+ ++ ++ KG + +Y +I +G S ++ A V+ ++ G +
Sbjct: 108 PAKALHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRF 167
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR-CLEKPREILG--LFDRMI 306
N++I+ G +E+ V M + G P V+T++ L++ R + LFD M+
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227
Query: 307 ES-GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
++ G+ P T+ +L+R F + F +K+M C PD YN LVD L G +
Sbjct: 228 DTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKV 287
Query: 366 DMARKYDEEMFAKGLSAKPREELGTKLVQG 395
+A + M K + P T L++G
Sbjct: 288 KIAHNVVKGMVKKSPNLSPNVVTYTTLIRG 317
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 117/321 (36%), Gaps = 77/321 (23%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++I L + + D ++ M + IP+ T + K + T + EA F K
Sbjct: 345 TYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEK 404
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE------------------NKNVGF 133
+ E ++ D +Y LV +LC+ A+E F E N F
Sbjct: 405 MSELRVQPDSATYSVLVRSLCQRGDFRRAEEF-FDELAEKEILLHDVGCKPLVAAYNPMF 463
Query: 134 SGLVEMNKTKIYNMILRGW----------FKMSWWGKCREFWEE--------MDKRGVVK 175
L KTK + R +K G CRE E M +R V
Sbjct: 464 EYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVP 523
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV------------- 222
D +Y + +D + K G P A K ++M K +++++ A+
Sbjct: 524 DAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLV 583
Query: 223 ------GVSEGVDFAMRVYREMREMGCQP--------------------SVVTCNTVIKL 256
+ + +D + E+ CQ + C+TVI
Sbjct: 584 KLMLERRIRQNIDLSTHTMEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISG 643
Query: 257 LCENGRVREAYAVLAEMPKKG 277
LC+ +V EA+A+ E+ +KG
Sbjct: 644 LCKAHKVSEAFALYYELVEKG 664
>gi|357140426|ref|XP_003571769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Brachypodium distachyon]
Length = 637
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 135/305 (44%), Gaps = 70/305 (22%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YNM+L K + + +E+M ++ V D ++Y+I + + K+G+ +K + + EM
Sbjct: 224 YNMLLDALAKAGMVDQAYQVFEDMKQKYCVPDAYTYTILIRMSGKTGQTYKFLSFFDEMV 283
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT--------------- 249
+G ++++AYNTVI A+G ++ VD + V +M E CQP+ T
Sbjct: 284 SRGCALNLIAYNTVIEALGKNKMVDKVIFVLSKMIESDCQPNQFTYSLTLDILATEGQLH 343
Query: 250 --------CNT---------VIKLLCENGRVREAYAVLAEM------------------- 273
C+ ++K LC++G EA+ V M
Sbjct: 344 RLNEVLDICDRYLNKSIYSYLVKSLCKSGHASEAHNVFCRMWNSHESGDRDAFISMLEVL 403
Query: 274 ----------------PKKGCVPDVITYHCFFRCLEKPRE---ILGLFDRMIESGIRPKM 314
P+KG D+ Y+ F L K ++ I LFD+M SGI P +
Sbjct: 404 CNSGKTLEAIDLLHMMPEKGIDTDIGMYNMVFSALGKLKQVSFISTLFDKMKASGIAPDL 463
Query: 315 DTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
TY +++ +GR G + ++++ME C PD YN L++ L G LD A +E
Sbjct: 464 FTYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGDLDEAHILFKE 523
Query: 375 MFAKG 379
M KG
Sbjct: 524 MQEKG 528
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 147/352 (41%), Gaps = 47/352 (13%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
YN+VI+ LGK D ++ +M ++ PN T+ + T ++ +
Sbjct: 293 AYNTVIEALGKNKMVDKVIFVLSKMIESDCQ-PNQFTYSLTLDILATEGQLHRLNEVLDI 351
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
D + K SY LV +LC+ H EA +N+ R W
Sbjct: 352 CDRYLNKSIYSY--LVKSLCKSGHASEA------------------------HNVFCRMW 385
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
E D+ + ++++C SGK +A+ L M +KGI D+
Sbjct: 386 ----------NSHESGDRDAFIS-------MLEVLCNSGKTLEAIDLLHMMPEKGIDTDI 428
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
YN V A+G + V F ++ +M+ G P + T N +I G V +A + E
Sbjct: 429 GMYNMVFSALGKLKQVSFISTLFDKMKASGIAPDLFTYNIMISSYGRVGLVDKASGLFEE 488
Query: 273 MPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M C PDVITY+ CL K E LF M E G P + TY L+ FG+
Sbjct: 489 MEASSCKPDVITYNTLINCLGKNGDLDEAHILFKEMQEKGYDPDVFTYSTLIECFGKSNK 548
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ ++ +M GC P+ YN L+D L +G A K+ E M +GL+
Sbjct: 549 VDMACSLFDEMIAEGCIPNIVTYNILLDCLERRGKTAEAHKHYETMKQQGLT 600
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 7/225 (3%)
Query: 145 YNMILRGWFKMSW-WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
YN IL F+ G+ +M++ GV ++ + ++ + + + + ++L
Sbjct: 121 YNRILALLFRSKADPGEALRLVAQMERDGVAGNISTVNLLVGMGGGGVEVARCLEL---A 177
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
KK G++++ Y +++A S V VY EM G + + N ++ L + G V
Sbjct: 178 KKWGLRLNGYTYKCIVQAHLRSREVSKGFEVYEEMHRKGYKLDIFAYNMLLDALAKAGMV 237
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVML 320
+AY V +M +K CVPD TY R K + L FD M+ G + Y +
Sbjct: 238 DQAYQVFEDMKQKYCVPDAYTYTILIRMSGKTGQTYKFLSFFDEMVSRGCALNLIAYNTV 297
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
+ G+ + V V KM E C P++F Y+ +D L +G L
Sbjct: 298 IEALGKNKMVDKVIFVLSKMIESDCQPNQFTYSLTLDILATEGQL 342
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 12/225 (5%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y I++ + K E +EEM ++G D+ +Y++ +D + K+G +A +++++MK
Sbjct: 189 YKCIVQAHLRSREVSKGFEVYEEMHRKGYKLDIFAYNMLLDALAKAGMVDQAYQVFEDMK 248
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+K D Y +IR G + + + EM GC +++ NTVI+ L +N V
Sbjct: 249 QKYCVPDAYTYTILIRMSGKTGQTYKFLSFFDEMVSRGCALNLIAYNTVIEALGKNKMVD 308
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRC------LEKPREILGLFDRMIESGIRPKMDTYV 318
+ VL++M + C P+ TY L + E+L + DR + I Y
Sbjct: 309 KVIFVLSKMIESDCQPNQFTYSLTLDILATEGQLHRLNEVLDICDRYLNKSI------YS 362
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
L++ + G V+ +M S D A+ ++++ L + G
Sbjct: 363 YLVKSLCKSGHASEAHNVFCRMWNSHESGDRDAFISMLEVLCNSG 407
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 152/360 (42%), Gaps = 32/360 (8%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
YN ++D L K D ++ + MK +P+ T+ I+ + + + T+
Sbjct: 223 AYNMLLDALAKAGMVDQAYQVFEDMKQK-YCVPDAYTYTILIR------MSGKTGQTYKF 275
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG-----FSGLVEMN---KTKI 144
L F DE+ L Y VIEA G+NK V S ++E +
Sbjct: 276 LSFF---DEMVSRGCALNLIAYNTVIEA----LGKNKMVDKVIFVLSKMIESDCQPNQFT 328
Query: 145 YNMILRGWFKMSWWGKCREFWEEMD--KRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
Y++ L ++ G+ E +D R + K ++SY + +CKSG +A ++
Sbjct: 329 YSLTLD---ILATEGQLHRLNEVLDICDRYLNKSIYSYLV--KSLCKSGHASEAHNVFCR 383
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M D A+ +++ + S A+ + M E G + N V L + +
Sbjct: 384 MWNSHESGDRDAFISMLEVLCNSGKTLEAIDLLHMMPEKGIDTDIGMYNMVFSALGKLKQ 443
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVM 319
V + +M G PD+ TY+ + + GLF+ M S +P + TY
Sbjct: 444 VSFISTLFDKMKASGIAPDLFTYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNT 503
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L+ G+ G L +++K+M+E G PD F Y+ L++ +DMA +EM A+G
Sbjct: 504 LINCLGKNGDLDEAHILFKEMQEKGYDPDVFTYSTLIECFGKSNKVDMACSLFDEMIAEG 563
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 76/178 (42%), Gaps = 9/178 (5%)
Query: 207 GIKMDVVAYNTVIRAVGVSEG-VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G + D +YN ++ + S+ A+R+ +M G ++ T N LL G
Sbjct: 113 GFRHDAFSYNRILALLFRSKADPGEALRLVAQMERDGVAGNISTVN----LLVGMGGGGV 168
Query: 266 AYAVLAEMPKK-GCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLL 321
A E+ KK G + TY C + + RE+ +++ M G + + Y MLL
Sbjct: 169 EVARCLELAKKWGLRLNGYTYKCIVQAHLRSREVSKGFEVYEEMHRKGYKLDIFAYNMLL 228
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ G + + V++ M++ C PD + Y L+ G + +EM ++G
Sbjct: 229 DALAKAGMVDQAYQVFEDMKQKYCVPDAYTYTILIRMSGKTGQTYKFLSFFDEMVSRG 286
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 130/287 (45%), Gaps = 9/287 (3%)
Query: 102 VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKC 161
++Y ++D+LC+ + V EA L F E G S YN ++ + W
Sbjct: 291 IAYNTIIDSLCKDRQVTEAFNL-FSEMITKGISP-----DIFTYNSLIHALCNLCEWKHV 344
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
EM ++ ++ +S +D +CK G A + M K+G++ DVV Y ++
Sbjct: 345 TTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDG 404
Query: 222 VGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
+ +D A++V+ M GC P+V + N +I C+ R+ +A +L +M +G + D
Sbjct: 405 HCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIAD 464
Query: 282 VITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWK 338
+TY+ L + + + LF M+ SG P + TY +LL + L V+ K
Sbjct: 465 TVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLK 524
Query: 339 KMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
+E D YN +D + G L+ AR + +KGL R
Sbjct: 525 AIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVR 571
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 160/392 (40%), Gaps = 52/392 (13%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY ++++ L K + L+ M PN + + V EA F++
Sbjct: 257 TYGTLMNGLCKVGNTSAAIRLLRSMVQKNCR-PNVIAYNTIIDSLCKDRQVTEAFNLFSE 315
Query: 93 LDEFGLKDEV-SYCNLVDALC---EYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
+ G+ ++ +Y +L+ ALC E+KHV E N M +++ +
Sbjct: 316 MITKGISPDIFTYNSLIHALCNLCEWKHVTTL----LNEMVNSKI-----MPNVVVFSTV 366
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ K + + M KRGV D+ +Y+ MD C + +AVK++ M KG
Sbjct: 367 VDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGC 426
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+V +YN +I + +D AM + +M G VT NT+I LC GR++ A A
Sbjct: 427 VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIA 486
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREIL----------------------------- 299
+ EM G +PD++TY L K +
Sbjct: 487 LFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMC 546
Query: 300 ---------GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEF 350
LF + G++P + TY +++ + G L +++KM+E GCS D
Sbjct: 547 RAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGC 606
Query: 351 AYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
YN ++ + A + +EM A+G SA
Sbjct: 607 IYNTIIRGFLRSNETFGATQLLQEMLAEGFSA 638
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 138/313 (44%), Gaps = 20/313 (6%)
Query: 83 VNEAMGTFNK-LDEFGLKDEVSYCNLVDALCEYKH-----VIEAQELCFGENKNVGFSGL 136
+++A+ +FN+ L V + L+ ++ + KH + Q FG +V
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDV----- 185
Query: 137 VEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKA 196
N+++ + + G ++ K G D +++ + +C GK +A
Sbjct: 186 ------YTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEA 239
Query: 197 VKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKL 256
+ L+ + +G + DVV Y T++ + A+R+ R M + C+P+V+ NT+I
Sbjct: 240 LHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDS 299
Query: 257 LCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPK 313
LC++ +V EA+ + +EM KG PD+ TY+ L + + L + M+ S I P
Sbjct: 300 LCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPN 359
Query: 314 MDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDE 373
+ + ++ + G + V M + G PD Y AL+D + +D A K +
Sbjct: 360 VVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFD 419
Query: 374 EMFAKGLSAKPRE 386
M KG R
Sbjct: 420 TMVHKGCVPNVRS 432
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 137/328 (41%), Gaps = 12/328 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C +WK N + + +++V+D L K ++ +++ M P
Sbjct: 336 CNLCEWKHVTTLLNEM-VNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVE-P 393
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELC 124
+ T+ + + ++EA+ F+ + G V SY L++ C+ + + +A
Sbjct: 394 DVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKA---- 449
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
G + + GL+ T YN ++ G + + EM G + DL +Y I +
Sbjct: 450 MGLLEQMSLQGLIA--DTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILL 507
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
D +CK+ +A+ L K ++ + D++ YN I + + ++ A ++ + G Q
Sbjct: 508 DYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQ 567
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---L 301
P V T N +I LC+ G + EA + +M + GC D Y+ R + E G L
Sbjct: 568 PDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQL 627
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M+ G + T +++ G
Sbjct: 628 LQEMLAEGFSADVSTTTLIVEMLSDDGL 655
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 147/302 (48%), Gaps = 10/302 (3%)
Query: 83 VNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
+++ + ++L GLK DE Y N++ LC+ V+EA++L G K F V
Sbjct: 293 LDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNV---- 348
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
+Y ++ G+ K+ + ++EM ++ +V D+ +Y+ + +CKSGK +A +++
Sbjct: 349 --VYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFN 406
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
EM KG++ D V Y +I + + A V+ +M + G P+VVT + LC+NG
Sbjct: 407 EMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNG 466
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYV 318
+ A +L EM +KG P+V TY+ L K I + L + M +G P TY
Sbjct: 467 EIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYT 526
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
L+ + + G + + + M P +N L++ GML+ + E M K
Sbjct: 527 TLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEK 586
Query: 379 GL 380
G+
Sbjct: 587 GI 588
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 151/324 (46%), Gaps = 10/324 (3%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+P+ T+ + + + EA FN++ GL+ DEV+Y L+D C+ + EA
Sbjct: 379 VPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEA-- 436
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
F + + GL T Y + G K E EM ++G+ ++++Y+
Sbjct: 437 --FSVHNQMVQKGLTPNVVT--YTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNT 492
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ +CK G + VKL +EM G D + Y T++ A + A + R M
Sbjct: 493 IVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKR 552
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKP-REIL 299
QP++VT N ++ C +G + + ++ M +KG +P+ T++ + C++ R
Sbjct: 553 LQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATT 612
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
++ M + G+ P +TY +L++ + ++ + + K+M E G S Y+AL+
Sbjct: 613 EIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGF 672
Query: 360 IDKGMLDMARKYDEEMFAKGLSAK 383
+ ARK EEM GL A+
Sbjct: 673 YKRKKFVEARKLFEEMRKHGLVAE 696
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 134/303 (44%), Gaps = 10/303 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ + Y A + EA N++ + GL + V+Y L D LC+ + A EL
Sbjct: 415 PDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANEL 474
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
++ GL YN I+ G K+ + + EEMD G D +Y+
Sbjct: 475 LHEMSRK----GL--QPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTL 528
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
MD CK G+ KA +L + M K ++ +V +N ++ +S ++ R+ M E G
Sbjct: 529 MDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGI 588
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILG 300
P+ T N+++K C +R + M +G +PD TY+ + K R E
Sbjct: 589 MPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWF 648
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L M+E G TY L+R F + ++++M + G ++ Y+ VD
Sbjct: 649 LHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNY 708
Query: 361 DKG 363
++G
Sbjct: 709 EEG 711
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 169/436 (38%), Gaps = 105/436 (24%)
Query: 9 NDWKRALEFFNW------------VETDCHFTHTTDTYNSVIDILGKFFEF------DLS 50
ND+ L FNW +E+ C H + N + FEF D+S
Sbjct: 91 NDYPLVLNLFNWAKSQSQQQFHPTLESLCIVVHLSVASNDIQTAKRLVFEFCAKPKIDVS 150
Query: 51 WN-------LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS 103
+ LI+ KD S + F + F+ V V EA F+KL +G+ V
Sbjct: 151 KSFHLFTEMLIYTYKDWGS---HPLVFDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVD 207
Query: 104 YCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCRE 163
CNL F + F G+ KI +
Sbjct: 208 SCNL-----------------FLSRLSCNFEGI------KI----------------AVK 228
Query: 164 FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG 223
+EE + GV + S +I + +C+ GK +A L +M +G DVV+Y V+
Sbjct: 229 VFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYC 288
Query: 224 VSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA------------ 271
+D +++ E++ G +P N +I LLC+NG V EA +L
Sbjct: 289 RIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNV 348
Query: 272 -----------------------EMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRM 305
EM +K VPD++TY + K +++ +F+ M
Sbjct: 349 VYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEM 408
Query: 306 IESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
+ G+ P TY L+ + + G ++ F V +M + G +P+ Y AL D L G +
Sbjct: 409 LVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEI 468
Query: 366 DMARKYDEEMFAKGLS 381
D+A + EM KGL
Sbjct: 469 DVANELLHEMSRKGLQ 484
>gi|357495705|ref|XP_003618141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493156|gb|AES74359.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 846
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 169/386 (43%), Gaps = 63/386 (16%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM--KDNPSSIP- 65
+D AL FFNWV+ D FT + Y ++ ILG FD + L+ + +N + +
Sbjct: 116 SDASSALTFFNWVKNDLRFTLSLQNYCLIVHILGWNQIFDQAMKLLCELIQLNNVNVVSY 175
Query: 66 ----------------NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVD 109
N F ++ K YV +V + + TF K E V CN
Sbjct: 176 DDVYKCLIDCTEDCNWNPVIFDMLIKAYVKLGMVEKGLETFWKNVEGSFVPNVVACNC-- 233
Query: 110 ALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMD 169
+L G K+++ G+C E +EEM
Sbjct: 234 --------------------------------------LLNGLSKINYIGECWEVYEEMG 255
Query: 170 KRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVD 229
+ G+ ++ ++++I ++C+ G K ++M+++G + D+V YN +I ++
Sbjct: 256 RLGIHRNGYTFNIMTHVLCREGDSDKVNGFLEKMEEEGFEPDLVTYNILINGYCKKRRLE 315
Query: 230 FAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFF 289
A +Y+ M G P++++ + ++ LC+ G+++EA+ + +M ++G PDV++Y+
Sbjct: 316 DAFYLYKIMGIRGVVPNLISYSALMNGLCKEGKIKEAHQLFNQMVQRGIDPDVVSYNTLI 375
Query: 290 R--CLE--KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
C E K + L MI GIRP T ++ + + R G L + +++ G
Sbjct: 376 SGYCKEGGKMQMCRSLLHEMIGIGIRPDNVTCRIVFQGYTREGKLLSALNMVAELQRFGI 435
Query: 346 SPDEFAYNALVDALIDKGMLDMARKY 371
E Y+ L+ AL +G AR +
Sbjct: 436 KIPENLYDYLLVALCKEGRPFAARSF 461
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 135/347 (38%), Gaps = 60/347 (17%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ I+ Y + +A + + G+ + +SY L++ LC+ + EA +L
Sbjct: 296 PDLVTYNILINGYCKKRRLEDAFYLYKIMGIRGVVPNLISYSALMNGLCKEGKIKEAHQL 355
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGK---CREFWEEMDKRGVVKDLHSY 180
F + G V YN ++ G+ K GK CR EM G+ D +
Sbjct: 356 -FNQMVQRGIDPDVVS-----YNTLISGYCKEG--GKMQMCRSLLHEMIGIGIRPDNVTC 407
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY----- 235
I + GK A+ + E+++ GIK+ Y+ ++ A+ EG FA R +
Sbjct: 408 RIVFQGYTREGKLLSALNMVAELQRFGIKIPENLYDYLLVAL-CKEGRPFAARSFLIRIS 466
Query: 236 --------------------------------REMREMGCQPSVVTCNTVIKLLCENGRV 263
EM + + ++ T +I LC R
Sbjct: 467 QDGDYVPEMSTYIKLAESLCSFNNVEEALILKSEMAKKSMKLNLTTYKAIISCLCRVKRT 526
Query: 264 REAYAVLAEMPKKGCVPD------VITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTY 317
EA +L EM G +PD +I +C ++K +L F + + ++Y
Sbjct: 527 SEAENLLEEMVSLGILPDLEIKRALINGYCEENDVDKAVSLLKFFAKEFQVY---DTESY 583
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
+++ F G + + + K+ ++G P+ ++ L KGM
Sbjct: 584 NAIVKVFCEVGNVAELMELQDKLVKIGYVPNSLTCKYVIRGL-QKGM 629
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 103/242 (42%), Gaps = 20/242 (8%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P++ T RI+F+ Y + A+ +L FG+K E Y L+ ALC+ A+
Sbjct: 402 PDNVTCRIVFQGYTREGKLLSALNMVAELQRFGIKIPENLYDYLLVALCKEGRPFAAR-- 459
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMS----WWGKCRE---FWEEMDKRGVVKD 176
S L+ +++ Y + + K++ + E EM K+ + +
Sbjct: 460 ----------SFLIRISQDGDYVPEMSTYIKLAESLCSFNNVEEALILKSEMAKKSMKLN 509
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
L +Y + +C+ + +A L +EM GI D+ +I VD A+ + +
Sbjct: 510 LTTYKAIISCLCRVKRTSEAENLLEEMVSLGILPDLEIKRALINGYCEENDVDKAVSLLK 569
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR 296
+ + N ++K+ CE G V E + ++ K G VP+ +T R L+K
Sbjct: 570 FFAKEFQVYDTESYNAIVKVFCEVGNVAELMELQDKLVKIGYVPNSLTCKYVIRGLQKGM 629
Query: 297 EI 298
E+
Sbjct: 630 EL 631
>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
Length = 680
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 136/317 (42%), Gaps = 44/317 (13%)
Query: 102 VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKC 161
+ +++ AL + +EA+ L F E + G +T+ YN +L+G+ K
Sbjct: 276 ATLVSIISALADSGRTLEAEAL-FEELRQSGIKP-----RTRAYNALLKGYVKTGPLKDA 329
Query: 162 REFWEEMDKRGVVKDLHSYSIYMDIMCKSGK----------------------------- 192
EM+KRGV D H+YS+ +D +G+
Sbjct: 330 ESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAG 389
Query: 193 -----PW-KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
W K ++ KEMK G+K D YN VI G +D AM + M G +P
Sbjct: 390 FRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPD 449
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFD 303
VT NT+I C++GR A + M ++GC+P TY+ E+ ++ L
Sbjct: 450 RVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLG 509
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
+M GI P + T+ L+ +G+ G ++M+ +G P YNAL++A +G
Sbjct: 510 KMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRG 569
Query: 364 MLDMARKYDEEMFAKGL 380
+ + A M + GL
Sbjct: 570 LSEQAVNAFRVMTSDGL 586
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 131/260 (50%), Gaps = 10/260 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ + ++ + + ++ AM TF+++ G++ D V++ L+D C++ I A+E+
Sbjct: 413 PDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEM 472
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ G + T YN+++ + W + +M +G++ ++ +++
Sbjct: 473 FEAMERR----GCLPCATT--YNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTL 526
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D+ KSG+ A++ +EMK G+K YN +I A + A+ +R M G
Sbjct: 527 VDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGL 586
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILG 300
+PS++ N++I E+ R EA+AVL M + G PDV+TY + L +K +++
Sbjct: 587 KPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPV 646
Query: 301 LFDRMIESGIRPKMDTYVML 320
+++ MI SG +P ML
Sbjct: 647 VYEEMIMSGCKPDRKARSML 666
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 164/409 (40%), Gaps = 43/409 (10%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDIL---GKFFEFDLSWNLIHRMKDNPSSI 64
+ D +AL+ + + T T S+I L G+ E + + + + S I
Sbjct: 253 SGDPSKALQLLGMAQA-TGLSAKTATLVSIISALADSGRTLEAEALFEELRQ-----SGI 306
Query: 65 -PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALC------EYKH 116
P + + K YV + +A +++++ G+ DE +Y L+DA +
Sbjct: 307 KPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARI 366
Query: 117 VIEAQELCFGENKNVGFSGLV-------EMNKT----------------KIYNMILRGWF 153
V++ E + + FS L+ E KT + YN+++ +
Sbjct: 367 VLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFG 426
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
K + ++ M G+ D +++ +D CK G+ A ++++ M+++G
Sbjct: 427 KFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCAT 486
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
YN +I + G E D R+ +M+ G P+VVT T++ + ++GR +A L EM
Sbjct: 487 TYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEM 546
Query: 274 PKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
G P Y+ + + + F M G++P + L+ FG
Sbjct: 547 KSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRD 606
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
F V + M+E G PD Y L+ ALI EEM G
Sbjct: 607 AEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSG 655
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 7/209 (3%)
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM--RVYREMREMGCQPSVVTCNT 252
KA+ L +M++ G + D V Y+ VI+++ S +D M R+Y+E+ + V N
Sbjct: 186 KALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVND 245
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLE---KPREILGLFDRMIESG 309
+I ++G +A +L G T L + E LF+ + +SG
Sbjct: 246 IIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSG 305
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
I+P+ Y LL+ + + G L+ + +ME+ G SPDE Y+ L+DA ++ G + AR
Sbjct: 306 IKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESAR 365
Query: 370 KYDEEMFAKGLSAKPREELGTKLVQGGLD 398
+EM A + +P + ++L+ G D
Sbjct: 366 IVLKEMEAGDV--QPNSFVFSRLLAGFRD 392
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 11/200 (5%)
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
KSG P KA++L + G+ ++I A+ S A ++ E+R+ G +P
Sbjct: 251 AKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRT 310
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL------EKPREILGL 301
N ++K + G +++A ++++EM K+G PD TY E R +L
Sbjct: 311 RAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVL-- 368
Query: 302 FDRMIESG-IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+ +E+G ++P + LL F G + F V K+M+ +G PD YN ++D
Sbjct: 369 --KEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFG 426
Query: 361 DKGMLDMARKYDEEMFAKGL 380
LD A + M ++G+
Sbjct: 427 KFNCLDHAMTTFDRMLSEGI 446
>gi|293336637|ref|NP_001167760.1| hypothetical protein [Zea mays]
gi|223943823|gb|ACN25995.1| unknown [Zea mays]
gi|414877894|tpg|DAA55025.1| TPA: hypothetical protein ZEAMMB73_945476 [Zea mays]
Length = 536
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 170/377 (45%), Gaps = 21/377 (5%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
+ +F+W T+ + T N VI LG+ FD + + M+ N + P+ T I+
Sbjct: 119 TVTYFDWAVTNSKPPPSVHTCNIVIRALGRKKFFDYLDDALQIMRRN-NIFPDLTTLEII 177
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFGL--------KDEVSYCNLVDALCEYKHVIEAQELCF 125
V A V+ A+ + D+FG KD ++ L+ LC HV A L
Sbjct: 178 MDSLVAARHVSRAVEVIST-DQFGFGIGKTCHRKD--AFTILIRCLCRRSHVGLASSLLQ 234
Query: 126 GENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMD 185
K + GL + +YN ++ GW + K +E W +M + G+V + S+ ++
Sbjct: 235 AARKEL--FGL----DSNVYNDVMGGWARFGSVDKLQEVWTKMQEDGLVPNEVSHCHLIE 288
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
+ + G+ A+K ++ M + +AYN +I +D ++ Y++M + C P
Sbjct: 289 GLGRVGQTEDALKAFEYMVHERYGPTTMAYNVLIFNFIHIGDLDSCIKYYKDMLDKNCSP 348
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLF 302
++ T + +IK RV +A + +M +G +P+ F L P L ++
Sbjct: 349 NIETYSKMIKAFLRGRRVADALQMFDDMLIQGVLPNTGMITSFINPLCTFGPPHAALMIY 408
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
+ ++G + Y +LL + ++G V +W++M+E G PD+ Y +V+ L +
Sbjct: 409 KKSRKAGCVISLKAYKLLLERLAKFGKSGIVLDIWEEMQECGYQPDKEIYEFIVNGLCNV 468
Query: 363 GMLDMARKYDEEMFAKG 379
G +D A EE G
Sbjct: 469 GKVDAAVSVVEESLRNG 485
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 69/140 (49%), Gaps = 1/140 (0%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
Y+ +++ + + + +++M +GV+ + + +++ +C G P A+ +YK+ +
Sbjct: 353 YSKMIKAFLRGRRVADALQMFDDMLIQGVLPNTGMITSFINPLCTFGPPHAALMIYKKSR 412
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K G + + AY ++ + + ++ EM+E G QP ++ LC G+V
Sbjct: 413 KAGCVISLKAYKLLLERLAKFGKSGIVLDIWEEMQECGYQPDKEIYEFIVNGLCNVGKVD 472
Query: 265 EAYAVLAEMPKKG-CVPDVI 283
A +V+ E + G C+ V+
Sbjct: 473 AAVSVVEESLRNGFCLGRVV 492
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 96/228 (42%), Gaps = 9/228 (3%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
AL+ F ++ + + TT YN +I + D M D S PN T+ M
Sbjct: 299 ALKAFEYMVHE-RYGPTTMAYNVLIFNFIHIGDLDSCIKYYKDMLDKNCS-PNIETYSKM 356
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
K ++ V +A+ F+ + G L + + ++ LC + A + + +++ G
Sbjct: 357 IKAFLRGRRVADALQMFDDMLIQGVLPNTGMITSFINPLCTFGPP-HAALMIYKKSRKAG 415
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
+ K Y ++L K G + WEEM + G D Y ++ +C GK
Sbjct: 416 C-----VISLKAYKLLLERLAKFGKSGIVLDIWEEMQECGYQPDKEIYEFIVNGLCNVGK 470
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
AV + +E + G + V Y+ + + + V+ A ++++++
Sbjct: 471 VDAAVSVVEESLRNGFCLGRVVYSKLNNKLLEMDKVETAYNLFKKVKH 518
>gi|218184813|gb|EEC67240.1| hypothetical protein OsI_34171 [Oryza sativa Indica Group]
Length = 458
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 145/318 (45%), Gaps = 8/318 (2%)
Query: 69 TFRIMFKRYVTAHLVNEAMG-TFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFG 126
TF + K ++AM ++ E +V C L+ LC+ EA EL
Sbjct: 132 TFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHM 191
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
+ G ++ Y ++ G+FK K + EM R + ++ +YS +
Sbjct: 192 MADDRGGGSPPDVVS---YTTVINGFFKEGDSDKAYSTYHEMLGRRISPNVVTYSSIIAA 248
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+CK+ KA+++ M K G+ D + Y++++ S + +MR G +P+
Sbjct: 249 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYCSSGQPKEDIGTLNKMRSDGVEPN 308
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFD 303
VVT +++ LC+NGR +A + M K+G PD+ TY + E+ L D
Sbjct: 309 VVTYRSLMNYLCKNGRCTKARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLD 368
Query: 304 RMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
M+ +GI+P + +L+ + + + +V+ KM + G +P+ Y ++D L G
Sbjct: 369 LMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSG 428
Query: 364 MLDMARKYDEEMFAKGLS 381
+D A Y E+M +GL+
Sbjct: 429 SVDDAMLYFEQMIDEGLT 446
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 125/281 (44%), Gaps = 10/281 (3%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTD--TYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
C N + ALE + + D D +Y +VI+ K + D +++ H M S
Sbjct: 177 CDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLGRRIS 236
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQE 122
PN T+ + A +++AM N + + G + D ++Y +++ C E
Sbjct: 237 -PNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYCSSGQPKED-- 293
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
G + G VE N Y ++ K K R+ ++ M KRG+ D+ +Y
Sbjct: 294 --IGTLNKMRSDG-VEPNVVT-YRSLMNYLCKNGRCTKARKIFDSMTKRGLEPDIATYRT 349
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ G + L M + GI+ D +N +I A E VD AM V+ +MR+ G
Sbjct: 350 LLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHG 409
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVI 283
P+VV TVI +LC++G V +A +M +G P++I
Sbjct: 410 LNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 450
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 132/333 (39%), Gaps = 68/333 (20%)
Query: 126 GENKNVGFSGL--VEMNKTKIYNMILRGW------FKMSWWGKCRE-------FWEEMDK 170
G +++G +G E + + + LRGW F + R+ + M +
Sbjct: 26 GTTQDLGRAGGSGTEGARHVLDELPLRGWGASIYSFNRTLTDVARDSPAAAVSLFNRMAR 85
Query: 171 RG---VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
G V DL +YSI + C++G+ + KKG +++ + + +++ + +
Sbjct: 86 AGADEVTPDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKR 145
Query: 228 VDFAMR-VYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK---GCVPDVI 283
AM V R M E+ C P V +C ++K LC+ R +EA +L M G PDV+
Sbjct: 146 TSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVV 205
Query: 284 --------------------TYH---------------------CFFRCLEKPREILGLF 302
TYH C + ++K E+L
Sbjct: 206 SYTTVINGFFKEGDSDKAYSTYHEMLGRRISPNVVTYSSIIAALCKAQAMDKAMEVL--- 262
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
+ M+++G+ P TY +L + G + KM G P+ Y +L++ L
Sbjct: 263 NTMVKNGVMPDCMTYSSILHGYCSSGQPKEDIGTLNKMRSDGVEPNVVTYRSLMNYLCKN 322
Query: 363 GMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
G ARK + M +GL +P L+QG
Sbjct: 323 GRCTKARKIFDSMTKRGL--EPDIATYRTLLQG 353
>gi|297808491|ref|XP_002872129.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317966|gb|EFH48388.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 588
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 174/373 (46%), Gaps = 23/373 (6%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKD-NPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+N +++ L K + + L+ M++ PS PN ++ + K + + V++A+ F+
Sbjct: 157 HNHLLNGLCKLGYIEKADGLVREMREMGPS--PNCVSYNTLIKGLCSVNNVDKALYLFST 214
Query: 93 LDEFGLKDEVSYCNL-VDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK------IY 145
L+++G+K CN+ V ALC+ K VI G N +++ ++
Sbjct: 215 LNKYGIKPNRVTCNIIVHALCQ-KGVI-------GNNNTKLLEEILDSSQVNAPLDIVTC 266
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
+++ FK + E W+EM ++ V D Y++ + +C SG A +M K
Sbjct: 267 TILMDSCFKNGNVVQALEVWKEMSQKNVPTDSVVYNVIIRGLCSSGNMVAAYGFMCDMVK 326
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+G+ DV YNT+I A+ + D A ++ M+ +G P ++ +I+ LC G V
Sbjct: 327 RGVNPDVFTYNTLISALCKAGKFDVACDLHGTMQNVGVAPDQISYKVIIQGLCIQGDVDR 386
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLR 322
A L M K+ +P+V+ ++ + + L + + M+ G++P + T L+
Sbjct: 387 ANEFLQSMLKRSLLPEVLLWNVVIDGYGRYGDTSCALSVLNLMLSYGVKPNVYTNNALIH 446
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ + G L + V +M PD YN LV A G L +A + +EM +G
Sbjct: 447 GYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLVGAACTLGHLRLAFQLYDEMLKRG--C 504
Query: 383 KPREELGTKLVQG 395
+P T+LV+G
Sbjct: 505 QPDIITYTELVRG 517
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 128/296 (43%), Gaps = 47/296 (15%)
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
+ KN + + ++ + + ++ L+G + W E+M + G + L ++ ++
Sbjct: 109 QTKNFEYDDSLSIHSSIMRDLCLQGKMDAALW-----LREKMLRSGFIPGLIMHNHLLNG 163
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+CK G KA L +EM++ G + V+YNT+I+ + VD A+ ++ + + G +P+
Sbjct: 164 LCKLGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFSTLNKYGIKPN 223
Query: 247 VVTCNTVIKLLCE---------------------------------------NGRVREAY 267
VTCN ++ LC+ NG V +A
Sbjct: 224 RVTCNIIVHALCQKGVIGNNNTKLLEEILDSSQVNAPLDIVTCTILMDSCFKNGNVVQAL 283
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKF 324
V EM +K D + Y+ R L ++ G M++ G+ P + TY L+
Sbjct: 284 EVWKEMSQKNVPTDSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISAL 343
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ G + M+ +G +PD+ +Y ++ L +G +D A ++ + M + L
Sbjct: 344 CKAGKFDVACDLHGTMQNVGVAPDQISYKVIIQGLCIQGDVDRANEFLQSMLKRSL 399
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 9/243 (3%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWG 159
D +Y L+ ALC+ A +L G +NVG + Y +I++G
Sbjct: 332 DVFTYNTLISALCKAGKFDVACDL-HGTMQNVGVAP-----DQISYKVIIQGLCIQGDVD 385
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
+ EF + M KR ++ ++ +++ +D + G A+ + M G+K +V N +I
Sbjct: 386 RANEFLQSMLKRSLLPEVLLWNVVIDGYGRYGDTSCALSVLNLMLSYGVKPNVYTNNALI 445
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
+ A V EMR P T N ++ C G +R A+ + EM K+GC
Sbjct: 446 HGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLVGAACTLGHLRLAFQLYDEMLKRGCQ 505
Query: 280 PDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVV 336
PD+ITY R L + +E L RM SGI +++L++K+ R ++V
Sbjct: 506 PDIITYTELVRGLCWKGRLKEAESLLSRMQVSGITMDHVPFLILVKKYTRLQRPDEAYLV 565
Query: 337 WKK 339
+KK
Sbjct: 566 YKK 568
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 106/275 (38%), Gaps = 58/275 (21%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN++I L K +FD++ +L H N P+ +++++ + V+ A
Sbjct: 335 TYNTLISALCKAGKFDVACDL-HGTMQNVGVAPDQISYKVIIQGLCIQGDVDRANEFLQS 393
Query: 93 LDEFGLKDEVSYCNLV-DALCEYKHVIEAQE-----LCFGENKNVGFSGLVEMNKTKIYN 146
+ + L EV N+V D Y A L +G NV N I+
Sbjct: 394 MLKRSLLPEVLLWNVVIDGYGRYGDTSCALSVLNLMLSYGVKPNV------YTNNALIHG 447
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
+ G +WW K EM + D +Y++ + C G A +LY EM K+
Sbjct: 448 YVKGGRLIDAWWVK-----NEMRSTKIHPDTTTYNLLVGAACTLGHLRLAFQLYDEMLKR 502
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
G + D++ Y ++R LC GR++EA
Sbjct: 503 GCQPDIITYTELVRG-----------------------------------LCWKGRLKEA 527
Query: 267 YAVLAEMPKKGC----VPDVITYHCFFRCLEKPRE 297
++L+ M G VP +I + R L++P E
Sbjct: 528 ESLLSRMQVSGITMDHVPFLILVKKYTR-LQRPDE 561
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 161/327 (49%), Gaps = 12/327 (3%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQE 122
+P+ T+ I+F + + F + + G+K C+ L++ LC+ + +A+E
Sbjct: 290 VPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEE 349
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ + + SGL++ T IYN ++ G+ ++ +++M R + D +Y+
Sbjct: 350 VL----QTLVNSGLLQ--TTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNA 403
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ + K + +A L EM+K G+ V +NT+I A G + ++ + +M+E G
Sbjct: 404 LINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKG 463
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH----CFFRCLEKPREI 298
+P+VV+ +++ C+NG++ EA A+L +M K +P Y+ + C +
Sbjct: 464 LKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAF 523
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
+ L ++M SG+ P + TY +L++ + + + + G +PD +YN L+ A
Sbjct: 524 M-LAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISA 582
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAKPR 385
+ D A + ++EM+ G+ PR
Sbjct: 583 CCYRSNTDRALELEKEMWKCGIKPSPR 609
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 159/357 (44%), Gaps = 20/357 (5%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T T+N + + D + ++ RM + + PN ++ ++ A +A+ F
Sbjct: 152 TFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLF 211
Query: 91 NKLDEFGL-KDEVSYCNLVDALC-----EYKHVIEAQELCFGENKNVGFSGLVEMNKTKI 144
+++ E + + ++Y ++D E + +Q L G NV
Sbjct: 212 DEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNV-----------IT 260
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN++L G + G+ +EM R +V D +YSI D ++G + L++E
Sbjct: 261 YNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESV 320
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
KKG+K+ + ++ + + A V + + G + V NT+I C+ G +
Sbjct: 321 KKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLE 380
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIE---SGIRPKMDTYVMLL 321
A+++ +M + PD ITY+ L K I D +IE +G+ P ++T+ L+
Sbjct: 381 GAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLI 440
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+GR G L F++ M+E G P+ +Y ++V+A G + A ++MF K
Sbjct: 441 DAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIK 497
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 133/287 (46%), Gaps = 13/287 (4%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWG 159
D ++Y L++ L + + + EA +L KN G + VE +N ++ + +
Sbjct: 397 DHITYNALINGLGKVERITEAHDLVIEMEKN-GVNPSVE-----TFNTLIDAYGRAGQLE 450
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
KC +M ++G+ ++ SY ++ CK+GK +AV + +M K + YN +I
Sbjct: 451 KCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAII 510
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
A D A + +M+ G PS+VT N +IK LC+ ++ EA +L + G
Sbjct: 511 DAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLA 570
Query: 280 PDVITYH-----CFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
PDVI+Y+ C +R L L M + GI+P TY ML G G + +
Sbjct: 571 PDVISYNTLISACCYR--SNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEME 628
Query: 335 VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
++++M + P YN +VDA G +EM KG++
Sbjct: 629 NLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIA 675
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 148/326 (45%), Gaps = 16/326 (4%)
Query: 60 NPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVI 118
N +P + + Y + A TF ++ +K D ++Y L++ LC+ + +
Sbjct: 364 NAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERIT 423
Query: 119 EAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
AQ+L E ++ G + VE +N ++ + + KC EM + G+ ++
Sbjct: 424 NAQDLLM-EMQDNGVNPTVE-----TFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVV 477
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
SY ++ CK+GK +AV + +M K + + YN +I A D A + +M
Sbjct: 478 SYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 537
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH------CFFRCL 292
+ G PS+VT N +IK LC ++ EA ++ + +PD ++Y+ C+ +
Sbjct: 538 KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNI 597
Query: 293 EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAY 352
+K L L RM + GI+ + TY L+ G G L + +++KM + P +
Sbjct: 598 DK---ALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIH 654
Query: 353 NALVDALIDKGMLDMARKYDEEMFAK 378
N +V+A G A +EM K
Sbjct: 655 NIMVEAYSKYGNEIKAEDLRKEMLQK 680
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 162/366 (44%), Gaps = 12/366 (3%)
Query: 25 CH-FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLV 83
CH TYN ++ L + + L+ M +P+ T+ I+F
Sbjct: 259 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQ-KMVPDGFTYSILFDGLSRNGDS 317
Query: 84 NEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKT 142
+ F K + G+ C+ L++ LC+ V A+E+ +++ +GLV
Sbjct: 318 KAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVL----QSLVNAGLVPTRV- 372
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
IYN ++ G+ + + +M R + D +Y+ ++ +CK+ + A L E
Sbjct: 373 -IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 431
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M+ G+ V +NT+I A G + ++ V EM+E G +P+VV+ +++ C+NG+
Sbjct: 432 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 491
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCL--EKPR-EILGLFDRMIESGIRPKMDTYVM 319
+ EA A+L +M K +P+ Y+ P + L ++M +GI P + TY +
Sbjct: 492 IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNL 551
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L++ + + + PD +YN L+ A +G +D A + M G
Sbjct: 552 LIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 611
Query: 380 LSAKPR 385
+ + R
Sbjct: 612 IKSTVR 617
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 154/373 (41%), Gaps = 55/373 (14%)
Query: 53 LIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDAL 111
++ RM + + PN ++ ++ A +A+ F+++ E L + ++Y ++D
Sbjct: 182 MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 241
Query: 112 C-----EYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE 166
E + Q +C G N YN++L G + G+ +
Sbjct: 242 IKGGDLEAGFSLRDQMVCHGLKPNA-----------ITYNVLLSGLCRAGRMGETSALLD 290
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
EM + +V D +YSI D + ++G + L+ + K G+ + + ++ +
Sbjct: 291 EMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDG 350
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
V A V + + G P+ V NT+I C+ G + A++ +M + PD ITY+
Sbjct: 351 KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYN 410
Query: 287 CFFRCLEKPREILGLFDRMIE---SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
L K I D ++E +G+ P ++T+ L+ +GR G L F+V +M+E
Sbjct: 411 ALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQEN 470
Query: 344 GCSPDEFAY-----------------------------------NALVDALIDKGMLDMA 368
G P+ +Y NA++DA ++ G D A
Sbjct: 471 GLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQA 530
Query: 369 RKYDEEMFAKGLS 381
E+M + G+S
Sbjct: 531 FILVEKMKSNGIS 543
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 140/340 (41%), Gaps = 33/340 (9%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+PNH T+ M ++ + +++ GLK + ++Y L+ LC + E
Sbjct: 228 LPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSA 287
Query: 123 LCF----------GENKNVGFSGLVEMNKTKIY-------------------NMILRGWF 153
L G ++ F GL +K +++L G
Sbjct: 288 LLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLC 347
Query: 154 KMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVV 213
K E + + G+V Y+ ++ C++G+ A + +MK + IK D +
Sbjct: 348 KDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHI 407
Query: 214 AYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
YN +I + +E + A + EM++ G P+V T NT+I G++ + + VL+EM
Sbjct: 408 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 467
Query: 274 PKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
+ G P+V++Y K E + + D M + P Y ++ + G
Sbjct: 468 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPN 527
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
F++ +KM+ G SP YN L+ L ++ + A +
Sbjct: 528 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE 567
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 110/252 (43%), Gaps = 16/252 (6%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T +T+N++ID G+ + + + ++ M++N PN ++ + + + EA+
Sbjct: 440 TVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK-PNVVSYGSIVNAFCKNGKIPEAVAI 498
Query: 90 FNKLDEFGLKDEVS----YCNLVDALCEYKHVIEAQELCFGEN-KNVGFSGLVEMNKTKI 144
LD+ KD + Y ++DA E H Q E K+ G S +
Sbjct: 499 ---LDDMFHKDVLPNAQVYNAIIDAYVE--HGPNDQAFILVEKMKSNGISPSI-----VT 548
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN++++G S + E + ++ D SY+ + C G KA+ L + M
Sbjct: 549 YNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMH 608
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K GIK V Y+ +I +G + + +Y++M + PS N +++ + G
Sbjct: 609 KYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEI 668
Query: 265 EAYAVLAEMPKK 276
+A + EM +K
Sbjct: 669 KAEDLRKEMLQK 680
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 14/186 (7%)
Query: 229 DFAMRVYREMRE--MGCQPSVVTCNTVIKLLCENGR---VREAYAVLAEMPKKGCVPDVI 283
D A+R+ ++ + PS+ +CN +++ L GR VR A+ +LA G PD
Sbjct: 105 DGALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILAS---AGARPDTF 161
Query: 284 TYHCFFR-CLEKPR--EILGLFDRMIESGIRPKMD-TYVMLLRKFGRWGFLRPVFVVWKK 339
++ + C+ E +G+ RM G P +Y +++ R G V+ +
Sbjct: 162 AWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDE 221
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL--SAKPREELGTKLVQGGL 397
M E P+ YN ++D I G L+ ++M GL +A L + L + G
Sbjct: 222 MTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGR 281
Query: 398 DGEQSG 403
GE S
Sbjct: 282 MGETSA 287
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 147/315 (46%), Gaps = 4/315 (1%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL 123
PN T+ + K H ++EA F ++ + G D V+Y L+ LC ++ A +L
Sbjct: 137 PNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKL 196
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
++ + YN+I+ G K+ + ++ +EEM +G++ + SY+
Sbjct: 197 HQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSL 256
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+ C +GK ++ +L EM +G++ D+V +N +I + V A ++ M E G
Sbjct: 257 IHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGI 316
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILG 300
P +VT N++I+ C G + A + MP KGC PDVI+Y+ K E +
Sbjct: 317 VPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMK 376
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L++ M+ G RP + TY LL+ G + ++ M+ G + + + Y +D L
Sbjct: 377 LYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLC 436
Query: 361 DKGMLDMARKYDEEM 375
L A K E+
Sbjct: 437 KNDCLFEAMKLFTEL 451
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 170/356 (47%), Gaps = 17/356 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN ++D L K D + L MK IP+ ++ + + A E+ ++
Sbjct: 217 TYNIIVDGLCKVGREDEAKQLFEEMKTQ-GMIPSIISYNSLIHGFCCAGKWEESKRLLDE 275
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGF---SGLVEMNKTKIYNMI 148
+ + GL+ D V++ L+D LC+ VIEA++L +G SG+V T YN +
Sbjct: 276 MLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKL-------LGVMIESGIVPDLVT--YNSL 326
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G+ + RE + M +G D+ SY++ ++ K+ K +A+KLY EM G
Sbjct: 327 IEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGK 386
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ +V+ Y+++++ + ++ VD A +++ M+ G + T + LC+N + EA
Sbjct: 387 RPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMK 446
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVMLLRKFG 325
+ E+ ++ +C L K ++ LF+++ G P + TY +++ F
Sbjct: 447 LFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFC 506
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
R G + V+ +KME GC+PD YN L+ + L+ + M K +S
Sbjct: 507 REGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVS 562
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 117/248 (47%), Gaps = 15/248 (6%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+N +L G K+ + + + +M G+ D + +I ++ +C + + + +
Sbjct: 72 FNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGIL 131
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
++G ++V YNT+I+ + + + A R++ M+++GC P VVT T+IK LC G +
Sbjct: 132 RRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNIN 191
Query: 265 EAYAVLAEMPKK------GCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMD 315
A + EM C P+VITY+ L K E LF+ M G+ P +
Sbjct: 192 IALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSII 251
Query: 316 TYVMLLRKF---GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
+Y L+ F G+W + + +M + G PD +N L+D L +G + A+K
Sbjct: 252 SYNSLIHGFCCAGKWEESKRLL---DEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLL 308
Query: 373 EEMFAKGL 380
M G+
Sbjct: 309 GVMIESGI 316
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 153/320 (47%), Gaps = 17/320 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N +ID L K + + L+ M ++ +P+ T+ + + + +N A F
Sbjct: 287 TFNVLIDTLCKEGKVIEAKKLLGVMIES-GIVPDLVTYNSLIEGFCMVGDLNSARELFVS 345
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G + D +SY L++ + V EA +L + E VG + Y+ +L+G
Sbjct: 346 MPSKGCEPDVISYNVLINGYSKTLKVEEAMKL-YNEMLLVG-----KRPNVITYDSLLKG 399
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
F ++ + M G+ ++ ++Y I++D +CK+ ++A+KL+ E+K K++
Sbjct: 400 IFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLE 459
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ N +I + + ++ A ++ ++ G +P+VVT +I C G+V +A ++
Sbjct: 460 IENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQ 519
Query: 272 EMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLL------R 322
+M GC PD+ITY+ R K E++ L RM + + P T +++
Sbjct: 520 KMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDE 579
Query: 323 KFGRWGFLRPVFVVWKKMEE 342
K+ L P F + K +++
Sbjct: 580 KYQECLHLLPRFPIQKGVDK 599
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 11/204 (5%)
Query: 188 CKSGK--PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
CK+G A+ + M + + ++N ++ + + +Y +MR G
Sbjct: 43 CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLF 302
T N ++ LC R+RE +A A + ++G P+++TY+ + C+E + E LF
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKM------EELGCSPDEFAYNALV 356
RM + G P + TY L++ G + + ++M E+ C P+ YN +V
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222
Query: 357 DALIDKGMLDMARKYDEEMFAKGL 380
D L G D A++ EEM +G+
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGM 246
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 146/325 (44%), Gaps = 20/325 (6%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQEL 123
P T+ M + V EA+ ++ + G L ++V+Y LV+ L + +A+EL
Sbjct: 188 PTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKEL 247
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
E +G Y+ ++RG+ + + EEM RG V L +Y+
Sbjct: 248 -IQEMLRLGLEV-----SAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTI 301
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
M +CK G+ A KL M K + D+V+YNT+I + A ++ E+R G
Sbjct: 302 MYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGL 361
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--C----LEKPRE 297
PSVVT NT+I LC G + A + EM K G PDV T+ R C L +E
Sbjct: 362 VPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKE 421
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP--VFVVWKKMEELGCSPDEFAYNAL 355
LFD M+ G++P D + + R G P F + ++M G PD YN
Sbjct: 422 ---LFDEMLNRGLQP--DRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVF 476
Query: 356 VDALIDKGMLDMARKYDEEMFAKGL 380
+D L G L A + ++M GL
Sbjct: 477 IDGLHKLGNLKEASELVKKMLYNGL 501
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 139/294 (47%), Gaps = 23/294 (7%)
Query: 98 LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSW 157
+ D VSY L+ ++ EA L F E + F GLV T YN ++ G +M
Sbjct: 327 MPDLVSYNTLIYGYTRLGNIGEAF-LLFAELR---FRGLVPSVVT--YNTLIDGLCRMGD 380
Query: 158 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
+EM K G D+ +++I + CK G A +L+ EM +G++ D AY
Sbjct: 381 LDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAY-- 438
Query: 218 VIRAVGVSEGVD----FAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
+ R VG + D F M+ EM G P ++T N I L + G ++EA ++ +M
Sbjct: 439 ITRIVGELKLGDPSKAFGMQ--EEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKM 496
Query: 274 PKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
G VPD +TY H L K R + F M+ GI P + TY +L+ +
Sbjct: 497 LYNGLVPDHVTYTSIIHAHLMAGHLRKARAV---FLEMLSKGIFPSVVTYTVLIHSYAVR 553
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G L+ + + +M E G P+ YNAL++ L +D A K+ EM AKG+S
Sbjct: 554 GRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGIS 607
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 112/222 (50%), Gaps = 3/222 (1%)
Query: 161 CREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIR 220
RE + M + G+ + +Y+ +D CK GK +A++L +M+K G + V YN ++
Sbjct: 174 AREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVN 233
Query: 221 AVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVP 280
+ S ++ A + +EM +G + S T + +I+ CE G++ EA + EM +G VP
Sbjct: 234 GLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVP 293
Query: 281 DVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVW 337
++TY+ L K + L D M+ + P + +Y L+ + R G + F+++
Sbjct: 294 TLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLF 353
Query: 338 KKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
++ G P YN L+D L G LD+A + +EM G
Sbjct: 354 AELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHG 395
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 165/374 (44%), Gaps = 11/374 (2%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
AL FF W E F + TY ++DIL + ++ ++ ++ +
Sbjct: 64 ALRFFRWAERQTGFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILD 123
Query: 74 FKRYVTA--HLVNEAMGTFNKLDEFGLKDEVSYCNLVDALC-EYKHVIEAQELCFGENKN 130
++ A ++ + + F K+ G+ ++ CN V L + I+ +
Sbjct: 124 LLLWIYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVE 183
Query: 131 VGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKS 190
G V YN +L + K + + +M K G + + +Y++ ++ + S
Sbjct: 184 CGIRPTV-----VTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHS 238
Query: 191 GKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTC 250
G+ +A +L +EM + G+++ Y+ +IR +D A R+ EM G P++VT
Sbjct: 239 GELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTY 298
Query: 251 NTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF---FRCLEKPREILGLFDRMIE 307
NT++ LC+ GRV +A +L M K +PD+++Y+ + L E LF +
Sbjct: 299 NTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRF 358
Query: 308 SGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDM 367
G+ P + TY L+ R G L + +M + G PD F + LV G L M
Sbjct: 359 RGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPM 418
Query: 368 ARKYDEEMFAKGLS 381
A++ +EM +GL
Sbjct: 419 AKELFDEMLNRGLQ 432
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 164/383 (42%), Gaps = 35/383 (9%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TYN+++ L K+ + L+ M N + +P+ ++ + Y + EA
Sbjct: 294 TLVTYNTIMYGLCKWGRVSDARKLLDVMV-NKNLMPDLVSYNTLIYGYTRLGNIGEAFLL 352
Query: 90 FNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELC-----FGENKNV--------GFSG 135
F +L GL V+Y L+D LC + A L G + +V GF
Sbjct: 353 FAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCK 412
Query: 136 L--VEMNKTKIYNMILRGW--------------FKMSWWGKCREFWEEMDKRGVVKDLHS 179
L + M K M+ RG K+ K EEM RG DL +
Sbjct: 413 LGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLIT 472
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
Y++++D + K G +A +L K+M G+ D V Y ++I A ++ + A V+ EM
Sbjct: 473 YNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEML 532
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI- 298
G PSVVT +I GR++ A EM +KG P+VITY+ L K R++
Sbjct: 533 SKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMD 592
Query: 299 --LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALV 356
F M GI P TY +L+ + G + ++K M + PD ++AL+
Sbjct: 593 QAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALL 652
Query: 357 DALIDKGMLDMARKYDEEMFAKG 379
L +K ++ E + A G
Sbjct: 653 KHL-NKDYKSHVVRHLENVIAAG 674
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 163/351 (46%), Gaps = 11/351 (3%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
Y+ VID L + D + + M N PN T+ + + E G +++
Sbjct: 188 YSIVIDCLCRNGFVDEGFEFYNEMMGN-GVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEM 246
Query: 94 DEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
GL V + L+D LC+ ++EA+E+ F E N G+ + + L+G
Sbjct: 247 IRRGLDVSVYVFTVLIDGLCKNGMLVEAREM-FDEMVNRGYEPNIVTCTALMGGYCLKGN 305
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
M+ RE ++ + + G +D+ +Y++++ CK G+ AV+++ EM ++G+ ++
Sbjct: 306 VDMA-----RELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNI 360
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V YN++I + + V A + + M G P +VTC ++ LC++ R+ +A + +
Sbjct: 361 VTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQ 420
Query: 273 MPKKGCVPDVITYHCFFR-CLEKPR--EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
+ + G PDV +Y C R E + L M + P + TY L+ R G
Sbjct: 421 LVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGR 480
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + + +M G PD Y+ L+DAL K LD A +M +GL
Sbjct: 481 ISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGL 531
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 140/303 (46%), Gaps = 10/303 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
PN T + Y V+ A F+ + E+G K +V +Y + C+ V +A +
Sbjct: 288 PNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRV 347
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F E G + + I + G +W E + M + G+ D+ + I
Sbjct: 348 -FDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAW-----EIVKTMHRSGLTPDIVTCCIL 401
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D +CKS + +A+ L+ ++ + G+ DV +Y +I S + AM + R+M
Sbjct: 402 LDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNL 461
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILG 300
P +VT + +I LC +GR+ A+ +L EM KG +PD ITY L K + E +
Sbjct: 462 VPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVF 521
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
LF++MI+ G+ P + Y +++ + + + ++++M PD Y L +A+
Sbjct: 522 LFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVF 581
Query: 361 DKG 363
G
Sbjct: 582 KSG 584
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 152/327 (46%), Gaps = 18/327 (5%)
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKL--------DEFGLK-DEVSYCNLVDALCEYKH 116
N ++ I+ VNEA+ + D F +K + V Y ++D LC
Sbjct: 141 NEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGF 200
Query: 117 VIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
V E E N+ +G +G+ T Y ++RG + + + +EM +RG+
Sbjct: 201 VDEGFEF---YNEMMG-NGVCPNEFT--YGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVS 254
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
++ +++ +D +CK+G +A +++ EM +G + ++V ++ + VD A ++
Sbjct: 255 VYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFD 314
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR 296
+ E G + V T N I C+ GRVR+A V EM ++G VP+++TY+ CL K
Sbjct: 315 AIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAG 374
Query: 297 EILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
E+ G + M SG+ P + T +LL + L +++ ++ E G +PD ++Y
Sbjct: 375 EVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYT 434
Query: 354 ALVDALIDKGMLDMARKYDEEMFAKGL 380
L+ + A +M K L
Sbjct: 435 ILIHGCCTSRRMGEAMNLLRDMHLKNL 461
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 5/287 (1%)
Query: 100 DEVSYCNLVDALCEYKHVIEAQELC--FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSW 157
+EVSY L++ LCE V EA L + K G +Y++++ + +
Sbjct: 141 NEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGF 200
Query: 158 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNT 217
+ EF+ EM GV + +Y + +C GK + L EM ++G+ + V +
Sbjct: 201 VDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTV 260
Query: 218 VIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKG 277
+I + + + A ++ EM G +P++VTC ++ C G V A + + + G
Sbjct: 261 LIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWG 320
Query: 278 CVPDVITYHCFFR--C-LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
DV TY+ F C + + R+ + +FD M G+ P + TY L+ + G + +
Sbjct: 321 FKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAW 380
Query: 335 VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ K M G +PD L+D L LD A ++ GL+
Sbjct: 381 EIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLT 427
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 111/235 (47%), Gaps = 13/235 (5%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+PN T+ + A V+ A + GL D V+ C L+D LC+ K + +A
Sbjct: 357 VPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAIL 416
Query: 123 LCFGENKNVGFSGLVEMNKTK---IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHS 179
L F+ LVE T Y +++ G G+ +M + +V + +
Sbjct: 417 L---------FNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVT 467
Query: 180 YSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMR 239
YS +D +C+SG+ A +L EM KG D + Y+ ++ A+ + +D A+ ++ +M
Sbjct: 468 YSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMI 527
Query: 240 EMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
+ G +P V+ +I C++ R+ EA + EM K VPD++TY F + K
Sbjct: 528 KRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFK 582
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 118/286 (41%), Gaps = 46/286 (16%)
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
T N +L+G K EF +E+ G + SY I ++ +C++G+ +AV L +
Sbjct: 107 TVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLLR 166
Query: 202 EMKKKG--------IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
++K+ +K +VV Y+ VI + + VD Y EM G P+ T ++
Sbjct: 167 MIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSL 226
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGI 310
I+ LC G+ E + ++ EM ++G V + L K E +FD M+ G
Sbjct: 227 IRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGY 286
Query: 311 RPKMDTYVMLLRKF----------------GRWGFLRPVFV------------------- 335
P + T L+ + G WGF R V+
Sbjct: 287 EPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVR 346
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
V+ +M G P+ YN+L+D L G + A + + M GL+
Sbjct: 347 VFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLT 392
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 111/246 (45%), Gaps = 31/246 (12%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYNS+ID L K E +W ++ M + + P+ T I+ + +++A+ FN+
Sbjct: 362 TYNSLIDCLCKAGEVSGAWEIVKTMHRSGLT-PDIVTCCILLDGLCKSKRLDQAILLFNQ 420
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGEN-KN-----VGFSGLVE------- 138
L E GL +V SY L+ C + + EA L + KN V +S L++
Sbjct: 421 LVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGR 480
Query: 139 ----------------MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ T Y+++L +K + + +M KRG+ D+ Y+I
Sbjct: 481 ISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTI 540
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+D CKS + +A+ L++EM K + D+V Y + AV S + + +R++
Sbjct: 541 MIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDIN 600
Query: 243 CQPSVV 248
P V+
Sbjct: 601 PPPRVL 606
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 17/198 (8%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
+ ++ ++ K+G +D VA NTV++ + V+ GV A+ + E+ G + V+ +I
Sbjct: 91 SFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILIN 150
Query: 256 LLCENGRVREAYAVLAEMPK-----------KGCVPDVITYHCFFRCLEKP---REILGL 301
LCENGRV EA +L + K KG +V+ Y CL + E
Sbjct: 151 GLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKG---NVVMYSIVIDCLCRNGFVDEGFEF 207
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
++ M+ +G+ P TY L+R G F + +M G + + L+D L
Sbjct: 208 YNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCK 267
Query: 362 KGMLDMARKYDEEMFAKG 379
GML AR+ +EM +G
Sbjct: 268 NGMLVEAREMFDEMVNRG 285
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 69/168 (41%), Gaps = 13/168 (7%)
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
V F+ ++ ++ + G V NTV+K LC NG V +A E+ G + ++Y
Sbjct: 88 VSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGI 147
Query: 288 FFRCL---EKPREILGLFDRMIESGIRPKMD---------TYVMLLRKFGRWGFLRPVFV 335
L + E + L RMIE + D Y +++ R GF+ F
Sbjct: 148 LINGLCENGRVNEAVNLL-RMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFE 206
Query: 336 VWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAK 383
+ +M G P+EF Y +L+ L G +EM +GL
Sbjct: 207 FYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVS 254
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 126/260 (48%), Gaps = 9/260 (3%)
Query: 141 KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLY 200
KT+ N +L + ++ + F+++M G + +Y+I +D MCK G A L+
Sbjct: 97 KTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLF 156
Query: 201 KEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCEN 260
+EMK +G+ D V YN++I G +D + + EM+ M C+P V+T NT+I C+
Sbjct: 157 EEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKF 216
Query: 261 GRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTY 317
G++ + EM + G P+V++Y K ++ L + M G+ P TY
Sbjct: 217 GKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTY 276
Query: 318 VMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFA 377
L+ + + G L F + +M ++G + Y AL+D L D + A EE+F
Sbjct: 277 TSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEA----EELFG 332
Query: 378 KGLSAK--PREELGTKLVQG 395
K ++A P T L+ G
Sbjct: 333 KMVTAGVIPNLASYTALIHG 352
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 135/300 (45%), Gaps = 10/300 (3%)
Query: 63 SIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQ 121
S P T+ IM + A G F ++ GL D V+Y +++D + + +
Sbjct: 129 SKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTV 188
Query: 122 ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
F E K++ V YN ++ + K K EF+ EM + G+ ++ SYS
Sbjct: 189 YF-FEEMKSMSCEPDV-----ITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYS 242
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+D CK +A+K Y +M++ G+ + Y +++ A + A R+ EM ++
Sbjct: 243 TLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQV 302
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI--- 298
G + +VVT +I LC+ R++EA + +M G +P++ +Y K + +
Sbjct: 303 GVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRA 362
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
L L D M GI+P + Y + + VV +M+E G + F Y L+DA
Sbjct: 363 LELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDA 422
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 134/299 (44%), Gaps = 11/299 (3%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TYN +ID + K + + + L MK IP+ T+ M Y +++ +
Sbjct: 132 TVFTYNIMIDCMCKEGDIEAASGLFEEMKFR-GLIPDTVTYNSMIDGYGKVGRLDDTVYF 190
Query: 90 FNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
F ++ + D ++Y L++ C++ + + E F E K G V Y+ +
Sbjct: 191 FEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEF-FREMKQSGLKPNVVS-----YSTL 244
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ + K + +F+ +M + G+V + H+Y+ +D CK G A +L EM + G+
Sbjct: 245 VDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGV 304
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ +VV Y +I + E + A ++ +M G P++ + +I + + A
Sbjct: 305 EWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALE 364
Query: 269 VLAEMPKKGCVPDVITYHCFF--RC-LEKPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
+L EM +G PD++ Y F C LEK + + M E GI+ Y L+ +
Sbjct: 365 LLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAY 423
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 167/373 (44%), Gaps = 16/373 (4%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T TYNS+ID GK D + MK + S P+ T+ + + + + + F
Sbjct: 168 TVTYNSMIDGYGKVGRLDDTVYFFEEMK-SMSCEPDVITYNTLINCFCKFGKLPKGLEFF 226
Query: 91 NKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
++ + GLK + VSY LVDA C+ + +A + + GLV T Y ++
Sbjct: 227 REMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRR----LGLVPNEHT--YTSLV 280
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
+ K+ +EM + GV ++ +Y+ +D +C + +A +L+ +M G+
Sbjct: 281 DAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVI 340
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
++ +Y +I ++ +D A+ + EM+ G +P ++ T I LC ++ A V
Sbjct: 341 PNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVV 400
Query: 270 LAEMPKKGCVPDVITY----HCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ EM +KG + Y +F+ E P E L L + M+E I T+ +L+
Sbjct: 401 MNEMQEKGIKANTFIYTTLMDAYFKS-ENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLC 459
Query: 326 RWGFLRPVFVVWKKME-ELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
+ + + ++ + G + Y A++D L + ++ A E+M KGL P
Sbjct: 460 KNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLV--P 517
Query: 385 REELGTKLVQGGL 397
T L+ G L
Sbjct: 518 DRTAYTSLIDGKL 530
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 128/286 (44%), Gaps = 11/286 (3%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQE 122
+PN T+ + Y +++A +++ + G++ + V+Y L+D LC+ + + EA+E
Sbjct: 270 VPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEE 329
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L FG+ G + Y ++ G+ K + E +EM RG+ DL Y
Sbjct: 330 L-FGKMVTAGV-----IPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGT 383
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ +C K A + EM++KGIK + Y T++ A SE + + EM E+
Sbjct: 384 FIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELD 443
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKK-GCVPDVITYHCFFRCLEKPREI--- 298
+ + VT +I LC+N V +A + G + Y L K ++
Sbjct: 444 IEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAA 503
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
LF++M + G+ P Y L+ + G + + KM E+G
Sbjct: 504 TTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIG 549
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 98/234 (41%), Gaps = 21/234 (8%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM--KKKGIK----MDVV--AYNTVI 219
M++ G + SY I I+ + + A ++ +EM K +K DV+ N +
Sbjct: 1 MNRNGFKHTIESYCIVAHILFCARMYYDANRILREMVLSKAELKDCDVFDVLWSTRNVCV 60
Query: 220 RAVGVSEGV----------DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
GV + + + A++ + +M+ P +CN ++ G+
Sbjct: 61 PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGR 326
+M G P V TY+ C+ K +I GLF+ M G+ P TY ++ +G+
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G L +++M+ + C PD YN L++ G L ++ EM GL
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGL 234
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 101/264 (38%), Gaps = 47/264 (17%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY ++ID L + L +M IPN A++ + +V A ++ A+ ++
Sbjct: 310 TYTALIDGLCDVERIKEAEELFGKMV-TAGVIPNLASYTALIHGFVKAKNMDRALELLDE 368
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G+K D + Y + +LC + IEA ++ E + G T IY ++
Sbjct: 369 MKGRGIKPDLLLYGTFIWSLCGLEK-IEAAKVVMNEMQEKGIKA-----NTFIYTTLMDA 422
Query: 152 WFKMS---------------------------WWGKCRE---------FWEEMDKRGVVK 175
+FK G C+ F + G+
Sbjct: 423 YFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQA 482
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
+ Y+ +D +CK + A L+++M +KG+ D AY ++I V A+ +
Sbjct: 483 NAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALR 542
Query: 236 REMREMGCQPSVV---TCNTVIKL 256
+M E+G + C IKL
Sbjct: 543 DKMAEIGVESGARFGDLCQNTIKL 566
>gi|358346363|ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503173|gb|AES84376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 172/373 (46%), Gaps = 31/373 (8%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY++++D K + +L+ ++ +M+ PN TF + Y ++++A+ +
Sbjct: 117 TYSALLDGYCKLGKMELAELVLQKMEKEHVP-PNVITFSSIINGYAKKGMLSKAVDVLRE 175
Query: 93 LDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + + + + Y L+D + A + C K + L E N I++++L
Sbjct: 176 MVQRNVMPNTIVYAILIDGYFKAGEQDVADDFC----KEMKSRRLEESNV--IFDILLNN 229
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
++ + R +M +G+ D+ +Y+ +D K G A+ + +EMK+K I+ D
Sbjct: 230 LKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFD 289
Query: 212 VVAYNTVIRAV------------------GVSEG--VDFAMRVYREMREMGCQPSVVTCN 251
VVAYN +I+ + G++ + A+ + EM+ G P+ VT N
Sbjct: 290 VVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPNAVTYN 349
Query: 252 TVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIES 308
+I LC+ G V +A + L EM VP IT+ + EK +IL + ++++ S
Sbjct: 350 ILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVAS 409
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G+ + Y L+ F R G R VV +M + G S D YNAL+ ++ A
Sbjct: 410 GLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKA 469
Query: 369 RKYDEEMFAKGLS 381
K +MF G++
Sbjct: 470 LKTYSQMFVDGIA 482
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 148/360 (41%), Gaps = 43/360 (11%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T Y +ID K E D++ + MK N F I+ ++EA
Sbjct: 185 TIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESN-VIFDILLNNLKRVGRMDEARSLI 243
Query: 91 NKLDEFGL-KDEVSYCNLVDALCEYKHVIEA----QELCFGENKNVGFSGLVEMNKTKIY 145
+ G+ D V+Y +L+D + + + A QE+ + KN+ F + Y
Sbjct: 244 IDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEM---KEKNIRFDVVA-------Y 293
Query: 146 NMILRGWFKMSWWGK---------------CR-----EFWEEMDKRGVVKDLHSYSIYMD 185
N +++G ++ + C+ + EM G++ + +Y+I +
Sbjct: 294 NALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPNAVTYNILIG 353
Query: 186 IMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQP 245
+CK+G KA EM + + +++A SE D ++++ ++ G +
Sbjct: 354 GLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLEL 413
Query: 246 SVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPRE-ILGLF 302
S+ NT+I + C G R+A VL EM K+G D++TY+ R C E L +
Sbjct: 414 SLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTY 473
Query: 303 DRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK----MEELGCSPDEFAYNALVDA 358
+M GI P + TY LL G + + +K M E G P+ Y+ LV
Sbjct: 474 SQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSG 533
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 139/347 (40%), Gaps = 36/347 (10%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV-DALCEYKHVIEAQEL 123
PNH ++ + + V EA +++ G+ ++ C V D L + EA+E+
Sbjct: 43 PNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEV 102
Query: 124 CFGENKNVGFSGLVEMNKTK---IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
F ++++N Y+ +L G+ K+ ++M+K V ++ ++
Sbjct: 103 ---------FETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITF 153
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
S ++ K G KAV + +EM ++ + + + Y +I + D A +EM+
Sbjct: 154 SSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKS 213
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PRE 297
+ S V + ++ L GR+ EA +++ +M KG PD++ Y K
Sbjct: 214 RRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLA 273
Query: 298 ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFV--------------------VW 337
L + M E IR + Y L++ R G P +V +
Sbjct: 274 ALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDIL 333
Query: 338 KKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
+M+ G P+ YN L+ L G ++ A +EM P
Sbjct: 334 NEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTP 380
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 3/216 (1%)
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M G++ D+ + S + C+ GK +A L++EM + G+ + V+Y T+I ++ S
Sbjct: 1 MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 60
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
V A + +M G +VTC TV+ L + G+ +EA V + K P+ +TY
Sbjct: 61 VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSA 120
Query: 288 FFR--CLEKPREILGL-FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG 344
C E+ L +M + + P + T+ ++ + + G L V ++M +
Sbjct: 121 LLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRN 180
Query: 345 CSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
P+ Y L+D G D+A + +EM ++ L
Sbjct: 181 VMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRL 216
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 107/236 (45%), Gaps = 3/236 (1%)
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
IL G+ + + + EM + G+ + SY+ ++ + KSG+ +A L +M +G
Sbjct: 16 ILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRG 75
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
I D+V TV+ + A V+ + ++ P+ VT + ++ C+ G++ A
Sbjct: 76 ISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAE 135
Query: 268 AVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKF 324
VL +M K+ P+VIT+ K + + + M++ + P Y +L+ +
Sbjct: 136 LVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGY 195
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ G K+M+ ++ L++ L G +D AR +M++KG+
Sbjct: 196 FKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGI 251
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 99/227 (43%), Gaps = 11/227 (4%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQE 122
+P T + + K Y + ++ + KL GL+ ++ Y L+ C +A+
Sbjct: 377 VPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAK- 435
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+ E G S YN ++RG+ S K + + +M G+ ++ +Y+
Sbjct: 436 VVLDEMVKRGISA-----DLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNT 490
Query: 183 YMDIMCKSG----KPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
+ + +G + KL EM ++G+ + Y+ ++ G + ++ EM
Sbjct: 491 LLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEM 550
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
G P++ T N +I ++G++ EA +L ++ KG +P+ TY
Sbjct: 551 ITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTY 597
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
MI +GI P + T +L F R G L V++++M E+G P+ +Y ++++L G
Sbjct: 1 MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 60
Query: 365 LDMARKYDEEMFAKGLS 381
+ A +M +G+S
Sbjct: 61 VMEAFNLQSQMVVRGIS 77
>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
Length = 822
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 187/432 (43%), Gaps = 41/432 (9%)
Query: 10 DWKRALEFFNWVETDCHFTHTTD----TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
D A+ +W ++ H D +++++ +L + FD + + M + P
Sbjct: 73 DPDLAVALLSWSQSPDHHVALQDPTPLAHSTLLRLLARSRRFDAVDDTLQSMS-LAGAAP 131
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKL-DEFGLKDEVSYCN-LVDALCEYKHVIEAQEL 123
A + Y A ++ +A +L +++G EV++CN L+ L E + +A++L
Sbjct: 132 TRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKL 191
Query: 124 ---CFGEN------------KNVGFSGLVE--------------MNKTKIYNMILRGWFK 154
GE+ + + G VE + YN+++ G+ +
Sbjct: 192 YDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCR 251
Query: 155 MSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVA 214
G+ EM+ +G + L +Y ++ + K G K L+ EM+K+G+ +V
Sbjct: 252 RGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQI 311
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
YN+VI A+ AM + ++M GC P ++T NT+I LC G VR+A L E
Sbjct: 312 YNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAI 371
Query: 275 KKGCVPDVITYHCFFRCLEKPREILGLFDRMIE---SGIRPKMDTYVMLLRKFGRWGFLR 331
++ P+ ++Y E++ D ++E G P + T+ L+ G +
Sbjct: 372 RRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVS 431
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTK 391
+V +KM E PD YN L+ L K ML A+ EEM K + +P E +
Sbjct: 432 EALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNV--QPDEFVYAT 489
Query: 392 LVQGGLDGEQSG 403
L+ G + E G
Sbjct: 490 LIDGFIRSENLG 501
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 157/404 (38%), Gaps = 35/404 (8%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C D R L +E F T TY S+I+ LGK + + +L M+ S P
Sbjct: 250 CRRGDMGRGLLLLGEMEAK-GFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLS-P 307
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQ--- 121
N + + +AM ++ G D +++ L+ LC HV +A+
Sbjct: 308 NVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFL 367
Query: 122 --------------------------ELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKM 155
EL + + G + ++ G
Sbjct: 368 REAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVA 427
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
+ E+M +R V D++ Y++ + +CK A + +EM +K ++ D Y
Sbjct: 428 GKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVY 487
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
T+I SE + A +++ M G +P +V+CN +IK C+ G + EA ++ M K
Sbjct: 488 ATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRK 547
Query: 276 KGCVPDVITYHCFFRCLEKPREILGLFD---RMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
GC+PD TY K + G MI+ +P + TY L+ + + G
Sbjct: 548 VGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDS 607
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMF 376
++ M+ SP+ Y L+ +L K + A Y E M
Sbjct: 608 AEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETML 651
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 140/361 (38%), Gaps = 31/361 (8%)
Query: 29 HTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI-PNHATFRIMFKRYVTAHLVNEAM 87
HT D I G +S LI R K + P+ + ++ H++ A
Sbjct: 410 HTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAK 469
Query: 88 GTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC-FGENKNVGFSGLVEMNKTKIY 145
++ E ++ DE Y L+D +++ +A+++ F E+K V + I
Sbjct: 470 NILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGV---------RPDIV 520
Query: 146 --NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
N +++G+ + + M K G + D +Y+ + K G A++ +M
Sbjct: 521 SCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDM 580
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
K+ K +VV Y+++I + D A ++ M+ P+VVT +I L + +V
Sbjct: 581 IKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKV 640
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRK 323
A M C P+ +T H L + I S + +
Sbjct: 641 LRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCV------INSICCNTSEVH------ 688
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAK 383
G+ L VV+KK+ P AYNA++ +L ML A + M KG
Sbjct: 689 -GKDALL----VVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPN 743
Query: 384 P 384
P
Sbjct: 744 P 744
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/327 (18%), Positives = 130/327 (39%), Gaps = 27/327 (8%)
Query: 32 DTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFN 91
+ YN +I L K + N++ M + + P+ + + ++ + + +A F
Sbjct: 450 NIYNVLISGLCKKHMLPAAKNILEEMLEK-NVQPDEFVYATLIDGFIRSENLGDARKIFE 508
Query: 92 KLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILR 150
++ G++ ++ CN ++ C++ + EA LC + VG + Y ++
Sbjct: 509 FMEHKGVRPDIVSCNAMIKGYCQFGMMSEAI-LCMSNMRKVGC-----IPDEFTYTTVIS 562
Query: 151 GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKM 210
G+ K + +M KR ++ +YS ++ CK+G A L+ M+ + +
Sbjct: 563 GYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSP 622
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
+VV Y +I ++ + V A + M C P+ VT + ++ L
Sbjct: 623 NVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGL------------- 669
Query: 271 AEMPKKGCVPDVITYHCFFRC-LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
C P VI C + +L +F +++ P+ Y ++ R
Sbjct: 670 -----TSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNM 724
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALV 356
LR +M + G P+ + +L+
Sbjct: 725 LREALDFKNRMAKKGYVPNPITFLSLL 751
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 145/322 (45%), Gaps = 12/322 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ TF + K AH V A+ ++ G+ DE ++ L+ E + IEA
Sbjct: 87 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVE-EGSIEAALR 145
Query: 124 CFGENKNVGFSGLVEMNKTKI-YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
+G S TK+ N+++ G+ K+ + ++ G D +Y+
Sbjct: 146 VKARMLEMGCSA------TKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 199
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+++ +C++ A+K+ M ++G DV YN V+ + + ++ A + +M + G
Sbjct: 200 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 259
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREIL 299
C P + T NT+I LC R+ EA + ++ KG PDV T++ L K P L
Sbjct: 260 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 319
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
LF+ M SG P TY L+ G L + K ME GC YN ++D L
Sbjct: 320 RLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGL 379
Query: 360 IDKGMLDMARKYDEEMFAKGLS 381
K ++ A + ++M +G+S
Sbjct: 380 CKKMRIEEAEEVFDQMDLQGIS 401
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 156/335 (46%), Gaps = 11/335 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN V++ L K + + + ++++M D +P+ TF + T + + EA+ +
Sbjct: 231 TYNIVVNCLCKNGQLEEAKGILNQMVDR-GCLPDITTFNTLIAALCTGNRLEEALDLARQ 289
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G+ +V N L++ALC+ A L F E KN G + YN ++
Sbjct: 290 VTVKGVSPDVYTFNILINALCKVGDPHLALRL-FEEMKNSGCT-----PDEVTYNTLIDN 343
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ GK + ++M+ G + +Y+ +D +CK + +A +++ +M +GI +
Sbjct: 344 LCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 403
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ +NT+I + + +D A + +M G QP+ +T N+++ C+ G +++A +L
Sbjct: 404 AITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 463
Query: 272 EMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M G DV+TY L K + L + M G+RP Y +L+ R
Sbjct: 464 TMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRN 523
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
+R ++++M E+G PD Y + L G
Sbjct: 524 NIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGG 558
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 117/243 (48%), Gaps = 3/243 (1%)
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
T +YN +L + S + EM RG+ D+ +++ M +C++ + AV + +
Sbjct: 54 TVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLE 113
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
EM +G+ D + T+++ ++ A+RV M EMGC + VT N +I C+ G
Sbjct: 114 EMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLG 173
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYV 318
RV +A + + G PD ITY+ F L + + L + D M++ G P + TY
Sbjct: 174 RVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYN 233
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
+++ + G L + +M + GC PD +N L+ AL L+ A ++ K
Sbjct: 234 IVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 293
Query: 379 GLS 381
G+S
Sbjct: 294 GVS 296
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 143/320 (44%), Gaps = 20/320 (6%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC--- 124
T ++ Y V +A+G + G + D+++Y V+ LC+ HV A ++
Sbjct: 161 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 220
Query: 125 --FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
G + +V F+ YN+++ K + + +M RG + D+ +++
Sbjct: 221 VQEGHDPDV-FT----------YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNT 269
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ +C + +A+ L +++ KG+ DV +N +I A+ A+R++ EM+ G
Sbjct: 270 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 329
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REIL 299
C P VT NT+I LC G++ +A +L +M GC ITY+ L K E
Sbjct: 330 CTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAE 389
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+FD+M GI T+ L+ + + F + +M G P+ YN+++
Sbjct: 390 EVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHY 449
Query: 360 IDKGMLDMARKYDEEMFAKG 379
+G + A E M A G
Sbjct: 450 CKQGDIKKAADILETMTANG 469
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 148/307 (48%), Gaps = 18/307 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDN--PSS 63
C D AL F ++ + T TYN++ID L + + +L+ M+ P S
Sbjct: 310 CKVGDPHLALRLFEEMK-NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 368
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQE 122
T+ + + EA F+++D G+ ++ +++ L+D LC+ K + +A E
Sbjct: 369 T---ITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFE 425
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L N+ + GL N T YN IL + K K + E M G D+ +Y
Sbjct: 426 LI---NQMIS-EGLQPNNIT--YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 479
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ +CK+G+ A+K+ + M+ KG++ AYN V++++ + A+ ++REM E+G
Sbjct: 480 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 539
Query: 243 CQPSVVTCNTVIKLLCENG-RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGL 301
P +T V + LC G ++EA+ + EM KG +P+ + FR L + LG+
Sbjct: 540 EPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSS----FRMLAEGLLNLGM 595
Query: 302 FDRMIES 308
D I +
Sbjct: 596 DDYFIRA 602
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 3/176 (1%)
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
GI+ D V YN ++ + + VY EM G +P VVT NT++K LC +VR A
Sbjct: 49 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 108
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRK 323
+L EM +G PD T+ + + I L + RM+E G T +L+
Sbjct: 109 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 168
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
+ + G + ++ G PD+ YN V+ L + A K + M +G
Sbjct: 169 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG 224
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 274 PKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
P G D + Y+ L K + + ++ M GI+P + T+ L++ R +
Sbjct: 46 PLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQV 105
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
R ++ ++M G +PDE + L+ +++G ++ A + M G SA
Sbjct: 106 RTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSA 157
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 113/226 (50%), Gaps = 4/226 (1%)
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPW-KAVKLYK 201
+ Y IL + + + + E +E M++ G+ L +Y++ +D+ K G+ W K ++L
Sbjct: 223 RAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELLD 282
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
EM+ +G+ D +TV+ A G +D A + ++ G +P VT N ++ + + G
Sbjct: 283 EMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAG 342
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYV 318
EA +VL+EM + C PD +TY+ + E + D M GI P TY
Sbjct: 343 IFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYT 402
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
++ +GR G + ++ +M ELGC P+ YNA++ L K +
Sbjct: 403 TIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSL 448
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 163/377 (43%), Gaps = 13/377 (3%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A + F+ + D + Y +++ + ++ + + RM ++ S P+ T+ +M
Sbjct: 206 ASKLFDVIPLD-DYVLDVRAYTTILHAYSRTGKYHRAIEIFERMNESGLS-PSLVTYNVM 263
Query: 74 FKRY-VTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
Y ++ + +++ GL + C+ V + C + +I+ F K+ G
Sbjct: 264 LDVYGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEG 323
Query: 133 FSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGK 192
+ T YN +L + K + + EM++ D +Y+ + ++G
Sbjct: 324 YKP-----GTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGF 378
Query: 193 PWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNT 252
+ + M KGI + V Y T+I A G +D A+ ++ +M E+GC P+V T N
Sbjct: 379 HEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNA 438
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESG 309
V+ +L + E +L M GC P+ IT++ K + + +F M G
Sbjct: 439 VLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCG 498
Query: 310 IRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMAR 369
P DT+ L+ +GR G + ++M + G SP YNAL++AL +G A
Sbjct: 499 FEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAE 558
Query: 370 KYDEEMFAKGLSAKPRE 386
+M KG +P E
Sbjct: 559 SVILDMRNKGF--RPSE 573
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 158/367 (43%), Gaps = 24/367 (6%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIM 73
A EFF+ ++++ + T TYN+++ + GK F + +++ M++N + P+ T+ +
Sbjct: 312 AREFFSGLKSEGYKPGTV-TYNALLHVFGKAGIFSEALSVLSEMEEN-NCPPDAVTYNEV 369
Query: 74 FKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVG 132
YV A E + + G + + V+Y +++A + +A E+
Sbjct: 370 VAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEM--------- 420
Query: 133 FSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
F ++E+ YN +L K S + + M G + +++ + + K
Sbjct: 421 FDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGK 480
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVT 249
G ++++EMK G + D +NT+I A G + A +++ EM + G P + T
Sbjct: 481 KGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINT 540
Query: 250 CNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESG 309
N ++ L G + A +V+ +M KG P +Y K + G+ MIE
Sbjct: 541 YNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGI--EMIEKS 598
Query: 310 IRPKMDTYV--MLLRKFGRWGF----LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
I D + MLLR F L + ++ +++ G PD N+++
Sbjct: 599 IYDG-DIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNN 657
Query: 364 MLDMARK 370
M D A +
Sbjct: 658 MYDRAHE 664
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 10/212 (4%)
Query: 176 DLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVY 235
D H+ + + I+ + + A KL+ + +DV AY T++ A + A+ ++
Sbjct: 186 DRHAIELMVRILGRESQHTVASKLFDVIPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIF 245
Query: 236 REMREMGCQPSVVTCNTVIKLLCENGRV-REAYAVLAEMPKKGCVPDVITYHCFFRC--- 291
M E G PS+VT N ++ + + GR + +L EM +G D T
Sbjct: 246 ERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGR 305
Query: 292 ---LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPD 348
+++ RE F + G +P TY LL FG+ G V +MEE C PD
Sbjct: 306 EGLIDEARE---FFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPD 362
Query: 349 EFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
YN +V A + G + + M +KG+
Sbjct: 363 AVTYNEVVAAYVRAGFHEEGAVVIDAMASKGI 394
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 153/406 (37%), Gaps = 55/406 (13%)
Query: 10 DWKRALEFFNWV-ETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
D +ALE F+ + E C TYN+V+ +LGK + ++ MK N S PNH
Sbjct: 413 DIDKALEMFDQMMELGC--VPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCS-PNHI 469
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE 127
T+ M + F ++ G + D ++ L+ A +A ++ E
Sbjct: 470 TWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKM-HEE 528
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
GFS + YN +L + W +M +G SYS+ +
Sbjct: 529 MIKAGFSPCI-----NTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSY 583
Query: 188 CKSGK------------------PWKAVKL-----------------YKEMKKKGIKMDV 212
K G W ++ ++ ++K G K D+
Sbjct: 584 AKGGNVKGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDL 643
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V N+++ + D A + R + + G QP +VT N+++ + G +A VL
Sbjct: 644 VLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRM 703
Query: 273 MPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
+ G PD+++Y+ + + +E + + M G+ P + TY + + G
Sbjct: 704 LQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGM 763
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
+ V M C P+E Y + D AR+YDE +
Sbjct: 764 FTEINDVISYMIVHNCRPNELTYKIVADGYCK------ARRYDEAI 803
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 144/359 (40%), Gaps = 25/359 (6%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY ++I+ G+ + D + + +M + +PN AT+ + L E M
Sbjct: 400 TYTTIINAYGRVGDIDKALEMFDQMME-LGCVPNVATYNAVLGMLGKKSLSEEMMKILGH 458
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
+ G N + A+C K + + F E KN GF +N ++ +
Sbjct: 459 MKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEP-----DRDTFNTLISAY 513
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK-LYKEMKKKGIKMD 211
+ + EEM K G +++Y+ ++ + + G WKA + + +M+ KG +
Sbjct: 514 GRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGD-WKAAESVILDMRNKGFRPS 572
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV-- 269
+Y+ ++ + V + + + + PS + T L+ N + R +
Sbjct: 573 ETSYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRT---LVLANFKCRSLTGMER 629
Query: 270 -LAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIE-------SGIRPKMDTYVMLL 321
+ K G PD++ + K ++DR E +G++P + T+ L+
Sbjct: 630 AFQALQKHGYKPDLVLCNSMLSIFAKNN----MYDRAHEMLRLIHDAGLQPDLVTHNSLM 685
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ R G V + ++ G PD +YN ++ KG++ + EM + G+
Sbjct: 686 DMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGV 744
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 165/373 (44%), Gaps = 16/373 (4%)
Query: 3 TLSCYANDW---KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLS--WNLIHRM 57
TLS N + KR + V+ + DT I G F S L+ RM
Sbjct: 157 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 216
Query: 58 KDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKH 116
PN T+ ++ + A+ NK++ ++ D V + ++D+LC+Y+H
Sbjct: 217 VQRGCQ-PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275
Query: 117 VIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
V +A L F E + G V Y+ ++ W + +M ++ + +
Sbjct: 276 VDDALNL-FKEMETKGIRPNVV-----TYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 329
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
L +++ +D K GK +A KLY +M K+ I D+ YN+++ + + +D A +++
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 389
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR 296
M C P VVT NT+IK C++ RV + + EM +G V D +TY + L
Sbjct: 390 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449
Query: 297 E---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
+ +F +M+ G+ P + TY +LL G L V+ M++ D + Y
Sbjct: 450 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 509
Query: 354 ALVDALIDKGMLD 366
+++ + G +D
Sbjct: 510 TMIEGMCKAGKVD 522
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 170/369 (46%), Gaps = 19/369 (5%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
+N ++ + K +FD+ +L +M+ + T+ I+ + ++ A+ K+
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQ-RLEIVHGLYTYNILINCFCRRSQISLALALLGKM 146
Query: 94 DEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIYNMIL 149
+ G + V+ +L++ C K + +A L +VEM T + ++
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVAL---------VDQMVEMGYRPDTITFTTLI 197
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G F + + + M +RG +L +Y + ++ +CK G A+ L +M+ I+
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE 257
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
DVV +NT+I ++ VD A+ +++EM G +P+VVT +++I LC GR +A +
Sbjct: 258 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 317
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGR 326
L++M +K P+++T++ K + + L+D MI+ I P + TY L+ F
Sbjct: 318 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 377
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPRE 386
L +++ M C PD YN L+ ++ + EM +GL
Sbjct: 378 HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 437
Query: 387 ELGTKLVQG 395
T L+QG
Sbjct: 438 Y--TTLIQG 444
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 134/263 (50%), Gaps = 16/263 (6%)
Query: 33 TYNSVIDIL---GKFFEFD-LSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
T+N++ID GKF E + L ++I R D P+ T+ + + +++A
Sbjct: 332 TFNALIDAFVKEGKFVEAEKLYDDMIKRSID-----PDIFTYNSLVNGFCMHDRLDKAKQ 386
Query: 89 TFN-KLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
F + + D V+Y L+ C+ K V + EL F E + G G T Y
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL-FREMSHRGLVG-----DTVTYTT 440
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
+++G F ++ +++M GV D+ +YSI +D +C +GK KA++++ M+K
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
IK+D+ Y T+I + + VD ++ + G +P+VVT NT+I LC ++EAY
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 560
Query: 268 AVLAEMPKKGCVPDVITYHCFFR 290
A+L +M + G +P+ TY+ R
Sbjct: 561 ALLKKMKEDGPLPNSGTYNTLIR 583
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 163/364 (44%), Gaps = 34/364 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY V++ L K + DL+ NL+++M+ + F + V++A+ F +
Sbjct: 227 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIE-ADVVIFNTIIDSLCKYRHVDDALNLFKE 285
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE-----NKN-VGFSGLVE------- 138
++ G++ + V+Y +L+ LC Y +A +L N N V F+ L++
Sbjct: 286 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 345
Query: 139 ----------MNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
M K I YN ++ G+ K ++ +E M + D+ +Y+
Sbjct: 346 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 405
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ CKS + +L++EM +G+ D V Y T+I+ + D A +V+++M G
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---L 299
P ++T + ++ LC NG++ +A V M K D+ Y + K ++
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 525
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
LF + G++P + TY ++ L+ + + KKM+E G P+ YN L+ A
Sbjct: 526 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAH 585
Query: 360 IDKG 363
+ G
Sbjct: 586 LRDG 589
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 82/190 (43%), Gaps = 3/190 (1%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A+ L+ M K +V +N ++ A+ + D + + +M+ + + T N +I
Sbjct: 69 AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILIN 128
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRP 312
C ++ A A+L +M K G P ++T ++ + + L D+M+E G RP
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
T+ L+ + +M + GC P+ Y +V+ L +G D+A
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLL 248
Query: 373 EEMFAKGLSA 382
+M A + A
Sbjct: 249 NKMEAAKIEA 258
>gi|255660960|gb|ACU25649.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 376
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 122/233 (52%), Gaps = 5/233 (2%)
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
SG VE + T Y +++ G+ K + K E +++G V D +YS ++ +CK
Sbjct: 88 SGFVEDSIT--YGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANL 145
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
+A+ + +M K G K +V YNT+I + + + A+RV+REM M C P+++T NT+
Sbjct: 146 DRALSVLNDMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTL 205
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPRE-ILGLFDRMIESGI 310
I LC+N EAY ++ E+ KG P VITY + CL+ E L L++++ G
Sbjct: 206 INGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHRVERALQLWNQVTSKGF 265
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
+P + + +L+ G ++ ++ M C+P+ ++N L++ G
Sbjct: 266 KPDVQMHNILIHGLCSVGKMQLALSLYFDMNHWKCAPNLVSHNTLMEGFYKDG 318
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 3/227 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+N+++RG F + WE M + G V+D +Y I + CK+G K++ + + +
Sbjct: 62 FNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAE 121
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+KG +D AY+ +I + +D A+ V +M + GC+P+V NT+I L +
Sbjct: 122 QKGGVLDAFAYSAMINGLCKEANLDRALSVLNDMIKSGCKPNVHVYNTLINGLVGASKFE 181
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLL 321
+A V EM C P +ITY+ L K E L +++ G+ P + TY ML+
Sbjct: 182 DAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLM 241
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
+ + +W ++ G PD +N L+ L G + +A
Sbjct: 242 KGLCLDHRVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLA 288
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 114/255 (44%), Gaps = 6/255 (2%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+YN +L G+F+++ C E WE M G + + S++I M + +GK + + +++ M
Sbjct: 27 VYNAMLNGYFRVAKIKDCFELWEMMGSEGN-RSVSSFNIMMRGLFDNGKVDEVISIWELM 85
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
K+ G D + Y ++ + +D ++ V + G + +I LC+ +
Sbjct: 86 KESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANL 145
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVML 320
A +VL +M K GC P+V Y+ L K + + +F M P + TY L
Sbjct: 146 DRALSVLNDMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTL 205
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + + + K++ + G P Y+ L+ L ++ A + ++ +KG
Sbjct: 206 INGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHRVERALQLWNQVTSKGF 265
Query: 381 SAKPREELGTKLVQG 395
KP ++ L+ G
Sbjct: 266 --KPDVQMHNILIHG 278
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 80/148 (54%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G K +G+ +E+ +G+ + +YS+ M +C + +A++L+ ++
Sbjct: 202 YNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHRVERALQLWNQVT 261
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
KG K DV +N +I + + A+ +Y +M C P++V+ NT+++ ++G +R
Sbjct: 262 SKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNHWKCAPNLVSHNTLMEGFYKDGDIR 321
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCL 292
A + A + + G PD+I+Y+ + L
Sbjct: 322 NALVIWARILRNGLEPDIISYNITLKGL 349
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 92/230 (40%), Gaps = 37/230 (16%)
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI----RAVGV-----------SEG----- 227
C+SG A ++YK++ + + D V YN ++ R + SEG
Sbjct: 1 CESGDIDGAKRVYKKIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60
Query: 228 --------------VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
VD + ++ M+E G +T ++ C+NG + ++ VL
Sbjct: 61 SFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMA 120
Query: 274 PKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
+KG V D Y L K + L + + MI+SG +P + Y L+
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRALSVLNDMIKSGCKPNVHVYNTLINGLVGASKF 180
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
V+++M + CSP YN L++ L M A +E+ KGL
Sbjct: 181 EDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGL 230
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 112/253 (44%), Gaps = 8/253 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
Y+++I+ L K D + ++++ M + PN + + V A +A+ F +
Sbjct: 131 AYSAMINGLCKEANLDRALSVLNDMIKSGCK-PNVHVYNTLINGLVGASKFEDAIRVFRE 189
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + +Y L++ LC+ + EA L K + GL T Y+M+++G
Sbjct: 190 MGTMHCSPTIITYNTLINGLCKNEMFGEAYNLV----KELLDKGLDPGVIT--YSMLMKG 243
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + W ++ +G D+ ++I + +C GK A+ LY +M +
Sbjct: 244 LCLDHRVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNHWKCAPN 303
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+V++NT++ + A+ ++ + G +P +++ N +K LC R+ +A L
Sbjct: 304 LVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLH 363
Query: 272 EMPKKGCVPDVIT 284
+ K V IT
Sbjct: 364 DAVTKKIVLTKIT 376
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 87/202 (43%), Gaps = 9/202 (4%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A+ ++ A+ F + T H + T TYN++I+ L K F ++NL+ + D P
Sbjct: 177 ASKFEDAIRVFREMGT-MHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLD-PGV 234
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFG 126
T+ ++ K H V A+ +N++ G K +V N L+ LC + A L F
Sbjct: 235 ITYSMLMKGLCLDHRVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFD 294
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
N LV +N ++ G++K W + + G+ D+ SY+I +
Sbjct: 295 MNHWKCAPNLVS------HNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKG 348
Query: 187 MCKSGKPWKAVKLYKEMKKKGI 208
+C + A+ + K I
Sbjct: 349 LCSCNRISDAILFLHDAVTKKI 370
>gi|356571194|ref|XP_003553764.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g04760, chloroplastic-like [Glycine max]
Length = 531
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 156/337 (46%), Gaps = 16/337 (4%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELC 124
P T+ I+ + + ++EA+ +++ E L+ +V N + +C +V A E+
Sbjct: 157 PTVVTYTILIEATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSIIXMCREGYVDRAFEV- 215
Query: 125 FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
+ G++ V YN++LR W E +M +G ++ +YS+ +
Sbjct: 216 ISSISSKGYALDV-----ITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLI 270
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG-VDFAMRVYREMREMGC 243
+C+ GK + V L K+MKKKG++ D Y+ +I AV EG VD A+ V M GC
Sbjct: 271 SSLCRDGKVEEGVGLLKDMKKKGLEPDGYCYDPLI-AVLCKEGRVDLAIEVLDVMISDGC 329
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE---ILG 300
P +V NT++ LC+ R EA ++ ++ + GC P+ +Y+ F L LG
Sbjct: 330 VPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALG 389
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPV--FVVWKKMEELGCSPDEFAYNALVDA 358
+ M++ + P + Y L+ R G + +V +ME C P +YN ++
Sbjct: 390 MILEMLDX-VDPDVIAYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLG 448
Query: 359 LIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
L G + A + M KG P E T L++G
Sbjct: 449 LCRVGRVSDATEVLAAMVDKG--CLPNETTYTFLIEG 483
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 4/220 (1%)
Query: 163 EFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV 222
+ + M +G D+ +Y+I + +C G A++ ++ K+ VV Y +I A
Sbjct: 110 QVLDRMKNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTYTILIEAT 169
Query: 223 GVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDV 282
+ G+D A+++ EM E+ QP V N++I +C G V A+ V++ + KG DV
Sbjct: 170 LLQGGIDEAIKLLDEMFEINLQPDVFPYNSIIX-MCREGYVDRAFEVISSISSKGYALDV 228
Query: 283 ITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKK 339
ITY+ R L L M+ G + TY +L+ R G + + K
Sbjct: 229 ITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLLKD 288
Query: 340 MEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
M++ G PD + Y+ L+ L +G +D+A + + M + G
Sbjct: 289 MKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDG 328
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 132/329 (40%), Gaps = 80/329 (24%)
Query: 129 KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC 188
KN GFS + I ++ RG + EF ++ K + +Y+I ++
Sbjct: 116 KNKGFSPDIVTYNILIGSLCSRGMLHAAL-----EFKNQLLKENFNPTVVTYTILIEATL 170
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI---------RAVGVSEGVD---FAMRVY- 235
G +A+KL EM + ++ DV YN++I RA V + +A+ V
Sbjct: 171 LQGGIDEAIKLLDEMFEINLQPDVFPYNSIIXMCREGYVDRAFEVISSISSKGYALDVIT 230
Query: 236 ---------------------REMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
+M GC+ +VVT + +I LC +G+V E +L +M
Sbjct: 231 YNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLLKDMK 290
Query: 275 KK-----------------------------------GCVPDVITYHCFFRCLEKPR--- 296
KK GCVPD++ Y+ CL K +
Sbjct: 291 KKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRAD 350
Query: 297 EILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF-LRPVFVVWKKMEELGCSPDEFAYNAL 355
E L +F+++ E G P +Y + G G +R + ++ + ++ + PD AYN+L
Sbjct: 351 EALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALGMILEMLDXV--DPDVIAYNSL 408
Query: 356 VDALIDKGMLDMARKYDEEMFAKGLSAKP 384
+ L GM+D A + +M + KP
Sbjct: 409 ISCLCRDGMVDEAIELLVDMEMESSECKP 437
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 174/411 (42%), Gaps = 47/411 (11%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
+N W A FF + ET + TYN +I I + +FD + L++ M S P+
Sbjct: 102 SNKWDEAESFFLYFET-MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFS-PDV 159
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQELCFG 126
++ + +++A+ F+++ E G+ +V+ Y L+D + ++ A E+
Sbjct: 160 FSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIW-- 217
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
G YN+++ G K + + E W M K +DL++YS +
Sbjct: 218 ---ERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHG 274
Query: 187 MCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPS 246
+C SG A ++YKEM + G+ DVV YNT++ + ++ + +++ M + GC+ +
Sbjct: 275 LCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-T 333
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL-------------- 292
VV+ N +I+ L EN +V EA ++ +P+K C D +TY L
Sbjct: 334 VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILE 393
Query: 293 --EKPR----------------------EILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
E R E+ G+ D+M + G +P ++ F R
Sbjct: 394 EAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRAS 453
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L + M GC P YN L++ L A +EM KG
Sbjct: 454 KLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKG 504
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 155/347 (44%), Gaps = 12/347 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+YN +I+ L K +FD S+ + HRMK N + T+ + + ++ A + +
Sbjct: 232 SYNVMINGLCKCGKFDESFEIWHRMKKNERG-QDLYTYSTLIHGLCGSGNLDGATRVYKE 290
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ E G+ D V Y +++ + E EL K G +V YN+++RG
Sbjct: 291 MAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKE-GCRTVVS------YNILIRG 343
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
F+ + + WE + ++ D +Y + + +CK+G KA+ + +E + +D
Sbjct: 344 LFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLD 403
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
AY+++I + +D V +M + GC+P+ CN VI ++ +A
Sbjct: 404 TFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFG 463
Query: 272 EMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M KGC P V+TY+ L K E L M++ G +P M TY +L+ +
Sbjct: 464 NMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGK 523
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
L +W + E G PD +N ++ L G ++ A + EM
Sbjct: 524 KLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM 570
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 154/325 (47%), Gaps = 12/325 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQEL 123
PN T+ I+ K ++A N + G +V SY L+++L + ++ +A +L
Sbjct: 122 PNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKL 181
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDK-RGVVKDLHSYSI 182
F E G + V YN+++ G+FK E WE + K V ++ SY++
Sbjct: 182 -FDEMPERGVTPDV-----ACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNV 235
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ +CK GK ++ +++ MKK D+ Y+T+I + S +D A RVY+EM E G
Sbjct: 236 MINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENG 295
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREIL 299
P VV NT++ GR+ E + M K+GC V++Y+ R L K E +
Sbjct: 296 VSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEAI 354
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
+++ + E TY +L+ + G+L + ++ E D FAY+++++ L
Sbjct: 355 SIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGL 414
Query: 360 IDKGMLDMARKYDEEMFAKGLSAKP 384
+G LD ++M G P
Sbjct: 415 CREGRLDEVAGVLDQMTKHGCKPNP 439
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 160/354 (45%), Gaps = 16/354 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+++I L D + + M +N S P+ + M Y+ A + E + +
Sbjct: 267 TYSTLIHGLCGSGNLDGATRVYKEMAENGVS-PDVVVYNTMLNGYLRAGRIEECLELWKV 325
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIYNMIL 149
+++ G + VSY L+ L E V EA + + L E + + Y +++
Sbjct: 326 MEKEGCRTVVSYNILIRGLFENAKVDEAISI---------WELLPEKDCCADSMTYGVLV 376
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G K + K EE + D +YS ++ +C+ G+ + + +M K G K
Sbjct: 377 HGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCK 436
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
+ N VI + ++ A+R + M GC P+VVT NT+I L + R EAYA+
Sbjct: 437 PNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYAL 496
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGR 326
+ EM +KG P++ITY L + +++ L L+ + +E G +P + + +++
Sbjct: 497 VKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCS 556
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G + ++ +M++ C P+ +N L++ + A K + + GL
Sbjct: 557 SGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGL 610
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 107/218 (49%), Gaps = 3/218 (1%)
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N ++ G+ + S F+ M +G + +Y+ ++ + K+ + +A L KEM +
Sbjct: 443 NAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQ 502
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
KG K +++ Y+ ++ + + +D A+ ++ + E G +P V N +I LC +G+V +
Sbjct: 503 KGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVED 562
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLR 322
A + +EM ++ CVP+++T++ K R+ ++D +++ G++P + +Y + L+
Sbjct: 563 ALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLK 622
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
+ + G P +N LV +
Sbjct: 623 GLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYL 660
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 112/240 (46%), Gaps = 5/240 (2%)
Query: 147 MILRGWFKMSWWGKCREFWEEMDKR-GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
++ + K S + + ++ M + G + SY+ ++ + +S K +A + +
Sbjct: 58 LVAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 117
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G+ ++ YN +I+ + D A + M G P V + T+I L +NG + +
Sbjct: 118 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSD 177
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIES-GIRPKMDTYVMLL 321
A + EMP++G PDV Y+ K +IL +++R+++ + P + +Y +++
Sbjct: 178 ALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMI 237
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ G F +W +M++ D + Y+ L+ L G LD A + +EM G+S
Sbjct: 238 NGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 297
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 117/261 (44%), Gaps = 8/261 (3%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T Y+S+I+ L + D ++ +M + PN + +V A + +A+ F
Sbjct: 404 TFAYSSMINGLCREGRLDEVAGVLDQMTKHGCK-PNPYVCNAVINGFVRASKLEDALRFF 462
Query: 91 NKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+ G V+Y L++ L + + EA L E G+ Y++++
Sbjct: 463 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALV-KEMLQKGWKP-----NMITYSLLM 516
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G + W + ++G D+ ++I + +C SGK A++LY EMK++
Sbjct: 517 NGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCV 576
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
++V +NT++ + A +++ + + G QP +++ N +K LC R+ +A
Sbjct: 577 PNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGF 636
Query: 270 LAEMPKKGCVPDVITYHCFFR 290
L + +G +P IT++ +
Sbjct: 637 LNDAVDRGVLPTAITWNILVQ 657
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 185/408 (45%), Gaps = 35/408 (8%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + K+AL+F + V F +Y ++I+ L K E + L+ +++ S P
Sbjct: 150 CLRGEVKKALKFHDDV-VALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEER-SIKP 207
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELC 124
+ + I+ LV EA +++++ + + V+Y L+ C +IEA L
Sbjct: 208 DVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALL 267
Query: 125 FGEN-KNVG-----FSGLVE-------MNKTKI----------------YNMILRGWFKM 155
KN+ FS L++ M KI YN ++ G+F +
Sbjct: 268 NEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLV 327
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
+ + + M + GV + SY+I +D +CK+ +A+ L++EMK K + + + +
Sbjct: 328 NEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITF 387
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPK 275
N++I + S + + + +MR+ V+T +++I LC+N + +A A+ +M
Sbjct: 388 NSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMIT 447
Query: 276 KGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRP 332
+ PD+ TY L K + +F ++ G + TY +++ F + G
Sbjct: 448 QEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDE 507
Query: 333 VFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ KME+ GC P+ ++ ++ AL +K D A K EM A+GL
Sbjct: 508 ALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGL 555
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 115/237 (48%), Gaps = 8/237 (3%)
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
T I + LRG K K +F +++ D SY ++ +CK G+ A++L +
Sbjct: 144 TLIKGLCLRGEVK-----KALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMR 198
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
++++ IK DVV YN +I ++ ++ V A +Y EM P+VVT T+I C G
Sbjct: 199 NLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMG 258
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYV 318
+ EA A+L EM K PDV T+ L K ++ + M+++ ++P + TY
Sbjct: 259 CLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYN 318
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
L+ + ++ V+ M + G +P +Y ++D L M+D A EEM
Sbjct: 319 SLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEM 375
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 127/281 (45%), Gaps = 16/281 (5%)
Query: 84 NEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKT 142
N+A+ FN++ + N++ +L + + A L +K++ F G+ T
Sbjct: 51 NDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISL----SKHLDFKGITSDLVT 106
Query: 143 KIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKE 202
N+++ + + + KRG D+ + + + +C G+ KA+K + +
Sbjct: 107 --LNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDD 164
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
+ ++D ++Y T+I + A+++ R + E +P VV N +I LC+N
Sbjct: 165 VVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKL 224
Query: 263 VREAYAVLAEMPKKGCVPDVITYH------CFFRCLEKPREILGLFDRMIESGIRPKMDT 316
V EA + +EM K P+V+TY C CL E + L + M I P + T
Sbjct: 225 VGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCL---IEAVALLNEMKLKNINPDVYT 281
Query: 317 YVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVD 357
+ +L+ G+ G ++ +V M + PD YN+LVD
Sbjct: 282 FSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVD 322
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 173/414 (41%), Gaps = 48/414 (11%)
Query: 21 VETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTA 80
V C TYN +I L KF + + + ++ M PN TF ++ + Y
Sbjct: 358 VMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMV-TLGCKPNSRTFCLLIEGYCRE 416
Query: 81 HLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEM 139
H + A+ +++++ L VSY +++ LC K + A +L + + FSGL
Sbjct: 417 HNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLL----EKMTFSGLKP- 471
Query: 140 NKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKL 199
+Y++++ + + R + M GV D+ Y+ + + K+GK +A
Sbjct: 472 -NVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 530
Query: 200 YKEMKKKGIKMDVVAYNTVI----RAVGVSEGVDF------------------------- 230
E++ +G+K D V + I + ++E +
Sbjct: 531 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFK 590
Query: 231 ------AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
A+ ++R + +G P V TC+ I L +NGRV+EA V +E+ +KG VPDV T
Sbjct: 591 AGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFT 650
Query: 285 YHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKME 341
Y K E+ L D M GI P + Y L+ + G ++ ++ M
Sbjct: 651 YSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP 710
Query: 342 ELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
E G PD Y+ ++D + A EM +KG+ +P + LV G
Sbjct: 711 EKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGV--QPHSFVYNALVHG 762
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 167/380 (43%), Gaps = 34/380 (8%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
Y+ VI+ + + + D + L M + +PN T+ I+ A +NEA TF ++
Sbjct: 266 YSLVIEGMCQVGDIDEAVELKRSMGEK-GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEM 324
Query: 94 DEFGLKDEVSYCNL----------VDALCEYKHVIEA--------------QELC-FGEN 128
+ GLK + + C+ +D + K V+ + LC FG+
Sbjct: 325 QKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKM 384
Query: 129 KNVG--FSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ G+V + ++ + +++ G+ + G+ E +EM+KR +V SY
Sbjct: 385 EKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAM 444
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
++ +C A KL ++M G+K +VV Y+ +I A ++ A R+ M G
Sbjct: 445 INGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGV 504
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILG 300
P + N +I L + G++ EA L E+ +G PD +T+ F K E
Sbjct: 505 APDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAK 564
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
FD M++ G+ P Y +L+ + G L +++++ LG PD +A + L+
Sbjct: 565 YFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLL 624
Query: 361 DKGMLDMARKYDEEMFAKGL 380
G + A K E+ KGL
Sbjct: 625 KNGRVQEALKVFSELKEKGL 644
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 148/308 (48%), Gaps = 17/308 (5%)
Query: 83 VNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK 141
V EA+ F++L E GL +V +Y +L+ C+ V +A EL + + G+
Sbjct: 629 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFEL----HDEMCLKGIAP--N 682
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
IYN ++ G K + R+ ++ M ++G+ D +YS +D CKS +A L+
Sbjct: 683 IFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFH 742
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
EM KG++ YN ++ ++ AM ++REM + G + ++ NT+I C++
Sbjct: 743 EMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSC 801
Query: 262 RVREAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIESGIRPKMD 315
+++EA + EM K +PD +TY HC +E+ LF M E +
Sbjct: 802 KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANL---LFKEMQERNLIVDTV 858
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
TY L+ + + G VF +++KM G PDE Y ++ A + L A K +E+
Sbjct: 859 TYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEV 918
Query: 376 FAKGLSAK 383
KG+ K
Sbjct: 919 VGKGMLTK 926
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 176/407 (43%), Gaps = 38/407 (9%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C ++ RALE + +E + + +Y ++I+ L + L+ L+ +M + P
Sbjct: 414 CREHNMGRALELLDEMEKR-NLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLK-P 471
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQ--- 121
N + I+ Y + + EA + + G+ ++ Y ++ L + + EA
Sbjct: 472 NVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYL 531
Query: 122 -----------ELCFGENKNVGFSGLVEMNKTK----------------IYNMILRGWFK 154
+ FG +G+S +M + +Y +++ G FK
Sbjct: 532 LEIQGRGLKPDAVTFGAFI-LGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFK 590
Query: 155 MSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVA 214
+ + + GV+ D+ + S ++ + K+G+ +A+K++ E+K+KG+ DV
Sbjct: 591 AGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFT 650
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
Y+++I V+ A ++ EM G P++ N ++ LC++G ++ A + MP
Sbjct: 651 YSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP 710
Query: 275 KKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
+KG PD +TY E E LF M G++P Y L+ + G +
Sbjct: 711 EKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDME 770
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAK 378
++++M + G + ++N L+D + A + +EM AK
Sbjct: 771 KAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAK 816
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 150/332 (45%), Gaps = 18/332 (5%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
YN+++D L K + + L M + P+ T+ M Y + V EA F+++
Sbjct: 686 YNALVDGLCKSGDIQRARKLFDGMPEKGLE-PDSVTYSTMIDGYCKSENVAEAFSLFHEM 744
Query: 94 DEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
G++ Y LV C+ + +A L F E GF+ T +N ++ G+
Sbjct: 745 PSKGVQPHSFVYNALVHGCCKEGDMEKAMNL-FREMLQKGFA------TTLSFNTLIDGY 797
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
K + + ++EM + ++ D +Y+ +D CK+GK +A L+KEM+++ + +D
Sbjct: 798 CKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDT 857
Query: 213 VAYNTVI---RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
V Y +++ +G S V FA+ + +M G +P VT VI C+ + EA+ +
Sbjct: 858 VTYTSLMYGYNKLGQSSEV-FAL--FEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKL 914
Query: 270 LAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGR 326
E+ KG + + L E E L D M E G++P + L+R F
Sbjct: 915 RDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHE 974
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
G + V++ ++ LG PD LV+
Sbjct: 975 AGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 1006
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/457 (21%), Positives = 178/457 (38%), Gaps = 88/457 (19%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNP---SSI-- 64
D KR L+FF W ++ D+++ + L F L+ ++ +M P SSI
Sbjct: 85 DPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILD 144
Query: 65 -----------PNHATFRIMFKRYVTAHLVNEAMGTF---------------NKLDEFGL 98
+ F I+ Y +++EA F N L + L
Sbjct: 145 SVLFWFRNYGGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLL 204
Query: 99 K---------------------DEVSYCNLVDALCEY-------KHVIEAQELCFGEN-- 128
K D +Y LV ALC+ + +IE E N
Sbjct: 205 KCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEF 264
Query: 129 ----------------------KNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWE 166
+++G GLV T Y +I G + + + +E
Sbjct: 265 IYSLVIEGMCQVGDIDEAVELKRSMGEKGLVP--NTYTYTIITAGLCRAKRMNEAKLTFE 322
Query: 167 EMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE 226
EM K G+ D ++ S +D + G + +++ M GI ++++ YN +I +
Sbjct: 323 EMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFG 382
Query: 227 GVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYH 286
++ A + + M +GC+P+ T +I+ C + A +L EM K+ VP ++Y
Sbjct: 383 KMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYG 442
Query: 287 CFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEEL 343
L +++ L ++M SG++P + Y +L+ + G + + M
Sbjct: 443 AMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCS 502
Query: 344 GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G +PD F YNA++ L G ++ A Y E+ +GL
Sbjct: 503 GVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGL 539
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 128/317 (40%), Gaps = 49/317 (15%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + D +RA + F+ + + + TY+++ID K +++L H M P
Sbjct: 694 CKSGDIQRARKLFDGM-PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQ-P 751
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCF 125
+ + + + +AM F ++ + G +S+ L+D C+ + EA +L
Sbjct: 752 HSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQL-- 809
Query: 126 GENKNVGFSGLVE---MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
F ++ M Y ++ K + ++EM +R ++ D +Y+
Sbjct: 810 -------FQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTS 862
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA-----------------VGVS 225
M K G+ + L+++M KG+K D V Y VI A VG
Sbjct: 863 LMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKG 922
Query: 226 ------------------EGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
E + A ++ EM E+G +PS+ CNT+++ E G++ EA
Sbjct: 923 MLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEAT 982
Query: 268 AVLAEMPKKGCVPDVIT 284
V + G VPD T
Sbjct: 983 RVFEGVKSLGLVPDTTT 999
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 88/201 (43%), Gaps = 5/201 (2%)
Query: 198 KLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLL 257
K+Y M + DV Y ++ A+ + + A RV EM E G P+ + VI+ +
Sbjct: 214 KVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGM 273
Query: 258 CENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKM 314
C+ G + EA + M +KG VP+ TY L ++ E F+ M ++G++P
Sbjct: 274 CQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDY 333
Query: 315 DTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEE 374
+ L+ F R G + V + M G + YN L+ L G ++ A + +
Sbjct: 334 NACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKG 393
Query: 375 MFAKGLSAKPREELGTKLVQG 395
M L KP L++G
Sbjct: 394 MVT--LGCKPNSRTFCLLIEG 412
>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 952
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 154/329 (46%), Gaps = 20/329 (6%)
Query: 69 TFRIMFKRYVTAHLVNEAMG-TFNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFG 126
TF + K ++AM ++ E G + + SY NL++ LC+ EA EL
Sbjct: 124 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHM 183
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
+ G ++ Y ++ G+FK K + EM RG++ D+ +YS +
Sbjct: 184 MADDRGGGSPPDVVS---YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAA 240
Query: 187 MCKS---GKPW---------KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRV 234
+CK KPW ++ KL+ M + G+K D++ Y+T+I ++ +D AM++
Sbjct: 241 LCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKL 300
Query: 235 YREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEK 294
M +G +P+ VT +T+I C+ R+ +A + EM G PD+ITY+ + L +
Sbjct: 301 LSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 360
Query: 295 PREILG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFA 351
R L+ R+ ESG + ++ TY ++L + +++ + + +
Sbjct: 361 TRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEART 420
Query: 352 YNALVDALIDKGMLDMARKYDEEMFAKGL 380
+N ++DAL+ G D A+ + GL
Sbjct: 421 FNIMIDALLKVGRNDEAKDLFVAFSSNGL 449
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 157/376 (41%), Gaps = 60/376 (15%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTD--TYNSVIDILGKFFEFDLSWNLIHRMKDNPSS 63
C N + ALE + + D D +Y +VI+ K + D +++ H M D
Sbjct: 169 CDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDR-GI 227
Query: 64 IPNHATFRIMFKRYVTAHLVN------------EAMGTFNKLDEFGLK-DEVSYCNLVDA 110
+P+ T+ + ++ E+ F+ + G+K D ++Y L+D
Sbjct: 228 LPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDG 287
Query: 111 LCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEE 167
C + EA +L SG+V + T Y+ ++ G+ K+S ++E
Sbjct: 288 YCLAGKMDEAMKL---------LSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKE 338
Query: 168 MDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEG 227
M+ GV D+ +Y+I + + ++ + A +LY + + G ++++ YN ++ + ++
Sbjct: 339 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKL 398
Query: 228 VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHC 287
D A+++++ + M + T N +I L + GR EA + G VP+ TY
Sbjct: 399 TDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL 458
Query: 288 FFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
+ + +I G+ ++D ++ ME+ GC+
Sbjct: 459 -------------MAENIIGQGLLEELDQ-------------------LFLSMEDNGCTV 486
Query: 348 DEFAYNALVDALIDKG 363
D N +V L+ +G
Sbjct: 487 DSGMLNFIVRELLQRG 502
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 111/274 (40%), Gaps = 57/274 (20%)
Query: 165 WEEMDKRG---VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRA 221
+ M + G V DL +Y I + C++G+ + KKG +++ + + +++
Sbjct: 72 YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKG 131
Query: 222 VGVSEGVDFAMR-VYREMREMGCQPSVVTCNTVIKLLCENGRVREA-------------- 266
+ + AM V R M E+GC P+V + N ++ LC+ R +EA
Sbjct: 132 LCADKRTSDAMDIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGG 191
Query: 267 ------------------------YAVLAEMPKKGCVPDVITYH------CFFRCLEKP- 295
Y+ EM +G +PDV+TY C + ++KP
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPW 251
Query: 296 --------REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
E LFD M+ G++P + TY L+ + G + + M +G P
Sbjct: 252 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKP 311
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
+ Y+ L++ ++ A +EM + G+S
Sbjct: 312 NTVTYSTLINGYCKISRMEDALVLFKEMESSGVS 345
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 35/170 (20%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ---PSVVTCNT 252
A ++ E+ ++G + N + V R Y M G P + T
Sbjct: 34 ARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSR-YNRMARAGADEVTPDLCTYGI 92
Query: 253 VIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRP 312
+I C GR+ +A L + KKG + IT+ + L + D
Sbjct: 93 LIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMD--------- 143
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDK 362
+V ++M ELGC P+ F+YN L++ L D+
Sbjct: 144 ----------------------IVLRRMTELGCIPNVFSYNNLLNGLCDE 171
>gi|225456631|ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
[Vitis vinifera]
Length = 875
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 171/400 (42%), Gaps = 57/400 (14%)
Query: 9 NDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHA 68
D AL FF W++ F H TY +++ ILG+ +F L+ M + PN
Sbjct: 357 QDHPVALGFFYWLKRQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQ-PNVV 415
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE 127
T+ + Y A+ +NEA+ F+++ E G + D V+YC L+D I A+
Sbjct: 416 TYNRLIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLID--------IHAK------ 461
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
+G +++ +++M + + D +YS+ ++ +
Sbjct: 462 ------AGFLDV---------------------ALHMYQKMQEAHLSPDTFTYSVIINCL 494
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
K+G A KL+ EM +G ++V YN +I + A+ +YR+M+ G QP
Sbjct: 495 GKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDK 554
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC------LEKPREILGL 301
VT + V+++L G + EA A+ EM +K VPD Y +EK E
Sbjct: 555 VTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWE---W 611
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
+ M+ +G+ P + T LL F R L + + + M LG P Y L+ +
Sbjct: 612 YQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTLLLSCCTE 671
Query: 362 -KGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGE 400
+ DM + E+ A ++ P + G DG+
Sbjct: 672 ARSSFDMG--FCGELMA--VTGHPAHMFLLSMPAAGPDGQ 707
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 172/387 (44%), Gaps = 38/387 (9%)
Query: 14 ALEFFNWVETDCHFTHTTDTYNSVIDI----LGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
AL F+W + D NSV+ I LGK + N+ + ++++ S+ + +
Sbjct: 154 ALRAFDWFMKQKDYQSMLD--NSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVY-S 210
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGE-- 127
+ + + + EA+ F K++E G K L Y ++ FG+
Sbjct: 211 YTSLISAFANSGRYREAVNVFKKMEEDGCKP---------TLITYNVILN----VFGKMG 257
Query: 128 ---NKNVGFSGLVEMNKTK-------IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
NK + LVE K+ YN ++ + S + + +EEM G D
Sbjct: 258 TPWNK---ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDK 314
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
+Y+ +D+ KS +P +A+K+ EM G +V YN++I A +D AM + +
Sbjct: 315 VTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQ 374
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EK 294
M E G +P V T T++ G+V A ++ EM GC P++ T++ F + K
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
E++ +FD + G+ P + T+ LL FG+ G V V+K+M+ G P+ +N
Sbjct: 435 FTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNT 494
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLS 381
L+ A G + A M G++
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVT 521
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 165/362 (45%), Gaps = 17/362 (4%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F++ TYN+++D+ GK + +++ M N S P+ T+ + Y +++EA
Sbjct: 310 FSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFS-PSIVTYNSLISAYARDGMLDEA 368
Query: 87 MGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI- 144
M N++ E G K +V +Y L+ E +E+ F E +N G K I
Sbjct: 369 MELKNQMAEKGTKPDVFTYTTLLSGF-ERAGKVESAMSIFEEMRNAGC-------KPNIC 420
Query: 145 -YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+N ++ + + + + ++E++ G+ D+ +++ + + ++G + ++KEM
Sbjct: 421 TFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 480
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
K+ G + +NT+I A + AM VYR M + G P + T NTV+ L G
Sbjct: 481 KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMW 540
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIE---SG-IRPKMDTYVM 319
++ VLAEM C P+ +TY +EI GL + E SG I P+
Sbjct: 541 EQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEI-GLMHSLAEEVYSGVIEPRAVLLKT 599
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L+ + L + +++E G SPD N++V + M+ A + M +G
Sbjct: 600 LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG 659
Query: 380 LS 381
+
Sbjct: 660 FT 661
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 132/295 (44%), Gaps = 11/295 (3%)
Query: 27 FTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEA 86
F +T+N++I + F+ + + RM D P+ +T+ + + ++
Sbjct: 485 FVPERETFNTLISAYSRCGSFEQAMTVYRRMLD-AGVTPDLSTYNTVLAALARGGMWEQS 543
Query: 87 MGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIY 145
++++ K +E++YC+L+ A K + L +SG++E +
Sbjct: 544 EKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLA-----EEVYSGVIEPRAVLLK 598
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
++L K + + E+ +RG D+ + + + I + KA + MK+
Sbjct: 599 TLVLV-CSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKE 657
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+G + YN+++ S + + RE+ G +P +++ NTVI C N R+R+
Sbjct: 658 RGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRD 717
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTY 317
A + +EM G VPDVITY+ F E +G+ MI+ G RP +TY
Sbjct: 718 ASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTY 772
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 123/300 (41%), Gaps = 25/300 (8%)
Query: 1 RETLSCYANDWKRALEFFNWVET-----DCHFTHTTDTYNSVIDILGKFFEFDLSWNLIH 55
RET + + + R F + D T TYN+V+ L + ++ S ++
Sbjct: 489 RETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLA 548
Query: 56 RMKDNPSSIPNHATFRIMFKRYVTA-------HLVNEAMGTFNKLDEFGLKDEVSYCNLV 108
M+D PN T+ + Y L E + LK V C+
Sbjct: 549 EMEDGRCK-PNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKC 607
Query: 109 DALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEM 168
D L E E F E K GFS + N ++ + + K + M
Sbjct: 608 DLLPE-------AERAFSELKERGFSPDI-----TTLNSMVSIYGRRQMVAKANGVLDYM 655
Query: 169 DKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGV 228
+RG + +Y+ M + +S K+ ++ +E+ KGIK D+++YNTVI A + +
Sbjct: 656 KERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRM 715
Query: 229 DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
A R++ EMR G P V+T NT I + EA V+ M K GC P+ TY+
Sbjct: 716 RDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSI 775
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 153/360 (42%), Gaps = 16/360 (4%)
Query: 25 CHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVN 84
C + T+N+++ + G+ D + + + +P TF + Y
Sbjct: 448 CGLSPDIVTWNTLLAVFGQN-GMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFE 506
Query: 85 EAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI 144
+AM + ++ + G+ ++S N V A + E E E ++ G + N+
Sbjct: 507 QAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED----GRCKPNEL-T 561
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMC-KSGKPWKAVKLYKEM 203
Y +L + G EE+ GV++ + ++C K +A + + E+
Sbjct: 562 YCSLLHAYANGKEIGLMHSLAEEV-YSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL 620
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
K++G D+ N+++ G + V A V M+E G PS+ T N+++ + +
Sbjct: 621 KERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADF 680
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVML 320
++ +L E+ KG PD+I+Y+ + R+ +F M SGI P + TY
Sbjct: 681 GKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTF 740
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + V + M + GC P++ YN++VD G + RK + ++F + L
Sbjct: 741 IGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVD-----GYCKLNRKDEAKLFVEDL 795
>gi|357454671|ref|XP_003597616.1| hypothetical protein MTR_2g100200 [Medicago truncatula]
gi|124360397|gb|ABN08410.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355486664|gb|AES67867.1| hypothetical protein MTR_2g100200 [Medicago truncatula]
Length = 527
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 172/389 (44%), Gaps = 22/389 (5%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILG--KFFEFDLSWNLIHRMKDNPSSIPNHATFRIMF 74
FFNW +Y+ ++ LG KFF F + ++ M+ N + I+
Sbjct: 122 FFNWALKQPMVPRDVGSYHVIVKALGRRKFFVFMM--QVLDEMRLNGIK-ADLLMLSIVI 178
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGF 133
+V A V++A+ F LD+ GL + N L+ LC HV A + V F
Sbjct: 179 DSFVNAGHVSKAIQLFGNLDDLGLCRDTEVLNVLLSCLCRRCHVGAAASVFNSMKGKVSF 238
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
+ YN+++ GW K+ + + +EM+ G D ++ + +++ + ++G+
Sbjct: 239 N-------VDTYNVVVGGWSKLGRVNEIEKVMKEMEVEGFSPDFNTLAFFLEGLGRAGRM 291
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
+AV+++ MK+K D YN +I D M+ Y M C+P++ T + +
Sbjct: 292 DEAVEVFGSMKEK----DTAIYNAMIFNFISIGDFDGFMKYYNGMLSDNCEPNIHTYSRM 347
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGI 310
I +V +A + EM ++G VP T F + L P + ++ + +
Sbjct: 348 ITAFLRTRKVADALLMFDEMLRQGVVPPTGTITSFIKQLCSYGPPYAAMMIYKKTRKLEC 407
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
+ M+ Y +LL + ++G + VW++M+E G S D Y ++ L + G L+ A
Sbjct: 408 KISMEAYKILLMRLSKFGKCGSLLSVWQEMQECGYSSDVEVYEYIISGLYNIGQLENAVL 467
Query: 371 YDEEMFAKGL--SAKPREELGTKLVQGGL 397
EE KG S +L KL+ L
Sbjct: 468 VMEEALRKGFCPSRLVYSKLSNKLLASNL 496
>gi|255660952|gb|ACU25645.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 376
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 121/233 (51%), Gaps = 5/233 (2%)
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
SG VE + T Y +++ G+ K + K E +++G V D +YS ++ +CK
Sbjct: 88 SGFVEDSIT--YGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANL 145
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
+A+ + M K G K +V YNT+I + + + A+RV+REM M C P+++T NT+
Sbjct: 146 DRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCPPTIITYNTL 205
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGLFDRMIESGI 310
I LC+N EAY ++ E+ KG P VITY + CL+ K L L++++ G
Sbjct: 206 INGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGF 265
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
+P + + +L+ G ++ ++ M C+P+ ++N L++ G
Sbjct: 266 KPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDG 318
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 107/227 (47%), Gaps = 3/227 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+N+++RG F + WE M + G V+D +Y I + CK+G K++ + + +
Sbjct: 62 FNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAE 121
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+KG +D AY+ +I + +D A+ V M + GC+P+V NT+I L +
Sbjct: 122 QKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFE 181
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLL 321
+A V EM C P +ITY+ L K E L +++ G+ P + TY ML+
Sbjct: 182 DAIRVFREMGTMHCPPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLM 241
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
+ + +W ++ G PD +N L+ L G + +A
Sbjct: 242 KGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLA 288
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 113/255 (44%), Gaps = 6/255 (2%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+YN +L G+F+++ C E WE M G + + S++I M + +GK + + +++ M
Sbjct: 27 VYNAMLNGYFRVAKIKDCFELWEMMGSEGN-RSVSSFNIMMRGLFDNGKVDEVISIWELM 85
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
K+ G D + Y ++ + +D ++ V + G + +I LC+ +
Sbjct: 86 KESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANL 145
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVML 320
A +VL M K GC P+V Y+ L K + + +F M P + TY L
Sbjct: 146 DRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKFEDAIRVFREMGTMHCPPTIITYNTL 205
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + + + K++ + G P Y+ L+ L ++ A + ++ +KG
Sbjct: 206 INGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGF 265
Query: 381 SAKPREELGTKLVQG 395
KP ++ L+ G
Sbjct: 266 --KPDVQMHNILIHG 278
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 82/154 (53%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G K +G+ +E+ +G+ + +YS+ M +C K +A++L+ ++
Sbjct: 202 YNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVT 261
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
KG K DV +N +I + + A+ +Y +M C P++V+ NT+++ ++G +R
Sbjct: 262 SKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIR 321
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI 298
A + A + + G PD+I+Y+ + L + I
Sbjct: 322 NALVIWARILRNGLEPDIISYNITLKGLCSCKRI 355
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 91/230 (39%), Gaps = 37/230 (16%)
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI----RAVGV-----------SEG----- 227
C+SG A ++YKE+ + + D V YN ++ R + SEG
Sbjct: 1 CESGDIDGAERVYKELVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60
Query: 228 --------------VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM 273
VD + ++ M+E G +T ++ C+NG + ++ VL
Sbjct: 61 SFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMA 120
Query: 274 PKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFL 330
+KG V D Y L K + L + + MI+SG +P + Y L+
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNVHVYNTLINGLAGASKF 180
Query: 331 RPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
V+++M + C P YN L++ L M A +E+ KGL
Sbjct: 181 EDAIRVFREMGTMHCPPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGL 230
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 112/253 (44%), Gaps = 8/253 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
Y+++I+ L K D + ++++ M + PN + + A +A+ F +
Sbjct: 131 AYSAMINGLCKEANLDRALSVLNGMIKSGCK-PNVHVYNTLINGLAGASKFEDAIRVFRE 189
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + +Y L++ LC+ + EA L K + GL T Y+M+++G
Sbjct: 190 MGTMHCPPTIITYNTLINGLCKNEMFGEAYNLV----KELLDKGLDPGVIT--YSMLMKG 243
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + W ++ +G D+ ++I + +C GK A+ LY +M + +
Sbjct: 244 LCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPN 303
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+V++NT++ + A+ ++ + G +P +++ N +K LC R+ +A L
Sbjct: 304 LVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCKRISDAILFLH 363
Query: 272 EMPKKGCVPDVIT 284
+ K V IT
Sbjct: 364 DAVTKKIVLTKIT 376
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 87/202 (43%), Gaps = 9/202 (4%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A+ ++ A+ F + T H T TYN++I+ L K F ++NL+ + D P
Sbjct: 177 ASKFEDAIRVFREMGT-MHCPPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLD-PGV 234
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFG 126
T+ ++ K H V A+ +N++ G K +V N L+ LC + A L F
Sbjct: 235 ITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFD 294
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
N+ LV +N ++ G++K W + + G+ D+ SY+I +
Sbjct: 295 MNRWKCAPNLVS------HNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKG 348
Query: 187 MCKSGKPWKAVKLYKEMKKKGI 208
+C + A+ + K I
Sbjct: 349 LCSCKRISDAILFLHDAVTKKI 370
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 145/319 (45%), Gaps = 10/319 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ + + Y + A ++ E G + V+Y L+ LC + EA
Sbjct: 241 PDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEA--- 297
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
FG K + GLV T Y I+ G K + + +EM G++ ++ YS
Sbjct: 298 -FGYKKEMEDYGLVPDGFT--YGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTL 354
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D + G +A K+ KEM G++ + + Y+ +IR + + A R+ ++M ++G
Sbjct: 355 IDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGY 414
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE---ILG 300
+T N VI+ EA+ +L EM K G P+V TY L + E G
Sbjct: 415 MADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASG 474
Query: 301 LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALI 360
L ++MI G++P Y L+ + R G KKM +PD + YN+L+ L
Sbjct: 475 LLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLS 534
Query: 361 DKGMLDMARKYDEEMFAKG 379
+ G +D A +Y +EM KG
Sbjct: 535 NVGKMDEAIEYYDEMLEKG 553
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 162/367 (44%), Gaps = 13/367 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY+++I+ K + + + ++ M++ S+ N T+ + A + EA G +
Sbjct: 245 TYSTLIEAYCKVRDLESAKKVVEEMRETGCSL-NVVTYNTLIGGLCRAGAIEEAFGYKKE 303
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
++++GL D +Y +++ LC+ +A+ L + +GL M +Y+ ++ G
Sbjct: 304 MEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLL----DEMSCAGL--MPNVVVYSTLIDG 357
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + + + +EM GV + +Y + +CK G+ +A ++ K+M K G D
Sbjct: 358 FMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMAD 417
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ YN VI + A + EMR+ G P+V T + +I LC+ G A +L
Sbjct: 418 TMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLE 477
Query: 272 EMPKKGCVPDVITYHCFFR--CLEKPREIL-GLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
+M G P+ Y C E + +M + P + Y L+ G
Sbjct: 478 QMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVG 537
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREEL 388
+ + +M E G P++F Y L+ G L+ A + +M GL+ P + +
Sbjct: 538 KMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLN--PNDFI 595
Query: 389 GTKLVQG 395
++++G
Sbjct: 596 YAQILEG 602
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 87/183 (47%), Gaps = 3/183 (1%)
Query: 203 MKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGR 262
M+ GI DV Y+T+I A ++ A +V EMRE GC +VVT NT+I LC G
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293
Query: 263 VREAYAVLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVM 319
+ EA+ EM G VPD TY L K P + L D M +G+ P + Y
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYST 353
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
L+ F R G F + K+M G P++ Y+ L+ L G + A + ++M G
Sbjct: 354 LIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIG 413
Query: 380 LSA 382
A
Sbjct: 414 YMA 416
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 146/343 (42%), Gaps = 17/343 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY ++I+ L K D + L+ M +PN + + ++ +EA +
Sbjct: 315 TYGAIINGLCKRGRPDQAKCLLDEMS-CAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKE 373
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G++ ++++Y NL+ LC+ + A + + +G+ M T YN+++ G
Sbjct: 374 MSAAGVQPNKITYDNLIRGLCKLGRMGRASRI-LKQMTKIGY-----MADTMTYNLVIEG 427
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + EM K G+ ++++YSI ++ +C+ G+ +A L ++M G+K +
Sbjct: 428 HLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPN 487
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
Y +I A ++M P + N++I L G++ EA
Sbjct: 488 AFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYD 547
Query: 272 EMPKKGCVPDVITYHCFFRC------LEKPREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
EM +KG P+ TY LEK ++L +M+ SG+ P Y +L +
Sbjct: 548 EMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLL---HQMLNSGLNPNDFIYAQILEGYF 604
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
+ L V K M E G PD Y ++ L G + A
Sbjct: 605 KSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAA 647
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 119/274 (43%), Gaps = 43/274 (15%)
Query: 160 KCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI 219
K R F M+ G+ D+++YS ++ CK A K+ +EM++ G ++VV YNT+I
Sbjct: 229 KVRGF---MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLI 285
Query: 220 RAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
+ + ++ A +EM + G P T +I LC+ GR +A +L EM G +
Sbjct: 286 GGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLM 345
Query: 280 PDVITYHCF---FRCLEKPREILGLFDRMIESGIRPKMDTYVMLLR---KFGRW------ 327
P+V+ Y F E + M +G++P TY L+R K GR
Sbjct: 346 PNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRI 405
Query: 328 ---------------------GFLRP-----VFVVWKKMEELGCSPDEFAYNALVDALID 361
G LR F++ +M + G SP+ + Y+ +++ L
Sbjct: 406 LKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQ 465
Query: 362 KGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
G + A E+M A GL KP + L+ G
Sbjct: 466 IGESERASGLLEQMIADGL--KPNAFVYAPLISG 497
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 105/265 (39%), Gaps = 7/265 (2%)
Query: 139 MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK 198
M ++Y +++ ++K G+V D Y + CK+ KAV
Sbjct: 625 MPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVG 684
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
L EM KKGI+ + YN +I S+ + A ++ + G P+ VT T+I C
Sbjct: 685 LLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYC 744
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMD 315
+ G +R+A + EM +G PD Y ++ L + + MI G +
Sbjct: 745 KAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYA-IIS 803
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
++ L+ F + G L+ M + P +V L + G L A E+
Sbjct: 804 SFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVEL 863
Query: 376 FAKGLSAKPREELG---TKLVQGGL 397
K S + + L T ++ GL
Sbjct: 864 QQKNASHRDTDHLSSLFTDMINQGL 888
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 10/233 (4%)
Query: 166 EEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVS 225
+ +R VV D + +D K+G+ ++ MK G+ + N +++ + +
Sbjct: 167 SDQGRRPVVLD-----VLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRA 221
Query: 226 EGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY 285
+ +D +V M G P V T +T+I+ C+ + A V+ EM + GC +V+TY
Sbjct: 222 DALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTY 281
Query: 286 HCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEE 342
+ L + E G M + G+ P TY ++ + G + +M
Sbjct: 282 NTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSC 341
Query: 343 LGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQG 395
G P+ Y+ L+D + +G D A K +EM A G+ +P + L++G
Sbjct: 342 AGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGV--QPNKITYDNLIRG 392
>gi|255660974|gb|ACU25656.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 372
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 121/233 (51%), Gaps = 5/233 (2%)
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
SG VE + T Y +++ G+ K + K E +++G V D +YS ++ +CK
Sbjct: 87 SGFVEDSIT--YGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANL 144
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
+AV + M K G K +V YNT+I + + + A+RV+REM M C P+++T NT+
Sbjct: 145 DRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTL 204
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPRE-ILGLFDRMIESGI 310
I LC+N EAY ++ E+ KG P VITY + CL+ E L L++++ G
Sbjct: 205 INGLCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHRVERALXLWNQVTSKGF 264
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
+P + + +L+ G ++ ++ M C+P+ ++N L++ G
Sbjct: 265 KPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDG 317
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 3/227 (1%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
+N+++RG F + WE M + G V+D +Y I + CK+G K++ + + +
Sbjct: 61 FNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAE 120
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
+KG +D AY+ +I + +D A+ V M + GC+P+V NT+I L +
Sbjct: 121 QKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFE 180
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLL 321
+A V EM C P +ITY+ L K + E L +++ G+ P + TY ML+
Sbjct: 181 DAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITYSMLM 240
Query: 322 RKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
+ + +W ++ G PD +N L+ L G + +A
Sbjct: 241 KGLCLDHRVERALXLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLA 287
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 112/255 (43%), Gaps = 6/255 (2%)
Query: 144 IYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEM 203
+YN +L G+F+++ C E WE M G + + S++I M + +GK + + +++ M
Sbjct: 26 VYNAMLNGYFRVAKIKDCFELWEMMGSEGN-RSVSSFNIMMRGLFDNGKVDEVISIWELM 84
Query: 204 KKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
K+ G D + Y ++ + +D ++ V + G + +I LC+ +
Sbjct: 85 KESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANL 144
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVML 320
A +VL M K GC P+V Y+ L K + + +F M P + TY L
Sbjct: 145 DRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTL 204
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + + + K++ + G P Y+ L+ L ++ A ++ +KG
Sbjct: 205 INGLCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHRVERALXLWNQVTSKGF 264
Query: 381 SAKPREELGTKLVQG 395
KP ++ L+ G
Sbjct: 265 --KPDVQMHNILIHG 277
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 77/142 (54%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G K +G+ +E+ +G+ + +YS+ M +C + +A+ L+ ++
Sbjct: 201 YNTLINGLCKNKMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHRVERALXLWNQVT 260
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
KG K DV +N +I + + A+ +Y +M C P++V+ NT+++ ++G +R
Sbjct: 261 SKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIR 320
Query: 265 EAYAVLAEMPKKGCVPDVITYH 286
A + A + + G PD+I+Y+
Sbjct: 321 NALVIWARILRNGLEPDIISYN 342
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 91/229 (39%), Gaps = 37/229 (16%)
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI----RAVGV-----------SEG------ 227
+SG A ++YKE+ + + D V YN ++ R + SEG
Sbjct: 1 ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVSS 60
Query: 228 -------------VDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
VD + ++ M+E G +T ++ C+NG + ++ VL
Sbjct: 61 FNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAE 120
Query: 275 KKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
+KG V D Y L K + + + + MI+SG +P + Y L+
Sbjct: 121 QKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNVHVYNTLINGLVGASKFE 180
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
V+++M + CSP YN L++ L M A +E+ KGL
Sbjct: 181 DAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGL 229
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 109/245 (44%), Gaps = 8/245 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
Y+++I+ L K D + ++++ M + PN + + V A +A+ F +
Sbjct: 130 AYSAMINGLCKEANLDRAVSVLNGMIKSGCK-PNVHVYNTLINGLVGASKFEDAIRVFRE 188
Query: 93 LDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + +Y L++ LC+ K EA L K + GL T Y+M+++G
Sbjct: 189 MGTMHCSPTIITYNTLINGLCKNKMFGEAYNLV----KELLDKGLDPGVIT--YSMLMKG 242
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ W ++ +G D+ ++I + +C GK A+ LY +M + +
Sbjct: 243 LCLDHRVERALXLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPN 302
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+V++NT++ + A+ ++ + G +P +++ N ++ LC R+ +A L
Sbjct: 303 LVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEGLCSCNRISDAILFLH 362
Query: 272 EMPKK 276
+ K
Sbjct: 363 DAVTK 367
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 10/203 (4%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A+ ++ A+ F + T H + T TYN++I+ L K F ++NL+ + D P
Sbjct: 176 ASKFEDAIRVFREMGT-MHCSPTIITYNTLINGLCKNKMFGEAYNLVKELLDKGLD-PGV 233
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFG 126
T+ ++ K H V A+ +N++ G K +V N L+ LC + A L F
Sbjct: 234 ITYSMLMKGLCLDHRVERALXLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFD 293
Query: 127 ENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDI 186
N+ LV +N ++ G++K W + + G+ D+ SY+I ++
Sbjct: 294 MNRWKCAPNLVS------HNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLEG 347
Query: 187 MCKSGKPWKAVK-LYKEMKKKGI 208
+C + A+ L+ + KK +
Sbjct: 348 LCSCNRISDAILFLHDAVTKKXV 370
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 160/403 (39%), Gaps = 74/403 (18%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHAT 69
D A +F + F HT TY +I+ LG+ + D L+ +MK S +
Sbjct: 58 DIVLASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISC-SEDL 116
Query: 70 FRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENK 129
F + Y L +A+ F ++ EFG + V
Sbjct: 117 FINVINTYRRVGLAEQALKMFYRIREFGCQPTV--------------------------- 149
Query: 130 NVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCK 189
KIYN +L + + + M + G ++++Y+I + +CK
Sbjct: 150 -------------KIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCK 196
Query: 190 SGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVG----VSEGVDFAMR------VYR--- 236
+ + A KL EM KG + DVV+Y TVI ++ V E + ++R VY
Sbjct: 197 NNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSVYNALI 256
Query: 237 -----------------EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCV 279
+M E G P+V+T +TVI L G V A AV A+M +GC
Sbjct: 257 NGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCS 316
Query: 280 PDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVV 336
P+V T+ + + E L +++RM E G P + Y L+ G + V
Sbjct: 317 PNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSV 376
Query: 337 WKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
KME GCSP+ Y AL+D G L A + +M G
Sbjct: 377 SSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNG 419
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 170/357 (47%), Gaps = 20/357 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY++VI L +L+ + +M S PN TF + K Y V EA+ +N+
Sbjct: 286 TYSTVISSLSGIGNVELALAVWAKMFVRGCS-PNVYTFTSLMKGYFMRGRVLEALNIWNR 344
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN----KTKIYNM 147
+ E G + + V+Y L+ LC + + EA V S +E N Y
Sbjct: 345 MAEEGFEPNVVAYNTLIHGLCSHGKMGEA----------VSVSSKMERNGCSPNVSTYGA 394
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
++ G+ K E W +M G + ++ Y+ ++++C+S +A L ++M
Sbjct: 395 LIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDN 454
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
+ V +NT I+ + S V+ A+ ++ +M + GC P++ T N V+ L + R++EA
Sbjct: 455 CPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEAL 514
Query: 268 AVLAEMPKKGCVPDVITYHCFFR--C-LEKPREILGLFDRMIESGIRPKMDTYVMLLRKF 324
++ EM +KG +++TY+ F C + K E L L +M+ G++P TY L +
Sbjct: 515 ELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAY 574
Query: 325 GRWGFLRPVFVVWKKMEELGC-SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
G ++ + K+ G P+ AY +L+ + ++ ++ A Y ++M +G+
Sbjct: 575 CMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGI 631
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 163/364 (44%), Gaps = 34/364 (9%)
Query: 17 FFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKR 76
F+ E C T YN ++D + F + + MK + PN T+ I+ K
Sbjct: 137 FYRIREFGCQ--PTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKE-PNVYTYNILLKA 193
Query: 77 YVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSG 135
+ V+ A ++ G + D VSY ++ ++ + V EA+EL NV
Sbjct: 194 LCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNV---- 249
Query: 136 LVEMNKTKIYNMILRGWFKMSWWGKCREF--------WEEMDKRGVVKDLHSYSIYMDIM 187
+YN ++ G+ CRE+ +M ++G+ ++ +YS + +
Sbjct: 250 -------SVYNALINGF--------CREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSL 294
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
G A+ ++ +M +G +V + ++++ + V A+ ++ M E G +P+V
Sbjct: 295 SGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNV 354
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDR 304
V NT+I LC +G++ EA +V ++M + GC P+V TY K +++G ++++
Sbjct: 355 VAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNK 414
Query: 305 MIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGM 364
M+ +G P + Y ++ R + + +KM C P+ +N + L G
Sbjct: 415 MMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGR 474
Query: 365 LDMA 368
++ A
Sbjct: 475 VECA 478
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 8/209 (3%)
Query: 189 KSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVV 248
+ G +A+K++ +++ G + V YN ++ A+ +Y M+ G +P+V
Sbjct: 126 RVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVY 185
Query: 249 TCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIES 308
T N ++K LC+N RV A +L EM KGC PDV++Y + K LG + E
Sbjct: 186 TYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSK----LGKVEEAREL 241
Query: 309 GIR--PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLD 366
IR P + Y L+ F R ++ VF++ +M E G P+ Y+ ++ +L G ++
Sbjct: 242 SIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVE 301
Query: 367 MARKYDEEMFAKGLSAKPREELGTKLVQG 395
+A +MF +G S P T L++G
Sbjct: 302 LALAVWAKMFVRGCS--PNVYTFTSLMKG 328
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 125/306 (40%), Gaps = 46/306 (15%)
Query: 8 ANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNH 67
A D A E +N + T+ + Y S++++L + F +W+LI +M + + PN
Sbjct: 402 AGDLVGASEIWNKMMTNGCIPNVV-VYTSMVNVLCRSSMFSQAWSLIEKMSTD-NCPPNT 459
Query: 68 ATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGE 127
TF K + V A+ F +++++G +
Sbjct: 460 VTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNI------------------------- 494
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
K YN +L G K + + E EM+++G+ +L +Y+
Sbjct: 495 ---------------KTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGF 539
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC-QPS 246
C GK +A+KL +M G+K D + YNT+ A + V A+++ ++ G P
Sbjct: 540 CNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPE 599
Query: 247 VVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFD 303
V +++ +C V EA L +M +G + T++ R L LG + D
Sbjct: 600 VAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNSLGHLGPIHILD 659
Query: 304 RMIESG 309
++ SG
Sbjct: 660 DILTSG 665
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 161/357 (45%), Gaps = 21/357 (5%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY S+I + DL++ + RM PN T+ + V+EA+ +
Sbjct: 235 TYTSLILGHCRNRNLDLAFGVFDRMVKEGCD-PNSVTYSTLINGLCNEGRVDEALDMLEE 293
Query: 93 LDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNK------TKIYN 146
+ E G++ V Y + + LC E++ + M K + Y
Sbjct: 294 MIEKGIEPTV-----------YTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYT 342
Query: 147 MILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKK 206
++ G ++ + +M K G+V + +Y+ ++ +C G+ A+K++ M+
Sbjct: 343 ALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGH 402
Query: 207 GIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA 266
G + YN +I+ + + ++ AM ++ +M +MG P+VVT NT+I G V A
Sbjct: 403 GSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNA 462
Query: 267 YAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGL---FDRMIESGIRPKMDTYVMLLRK 323
+L M + GC PD TY+ K ++ F M+E G+ P +Y L+
Sbjct: 463 ARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDG 522
Query: 324 FGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ G + + K+MEE+GC+P+ +YNA+++ L + A K ++M +GL
Sbjct: 523 HSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGL 579
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 162/347 (46%), Gaps = 25/347 (7%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TYN++I+ L F + + H M+ + S+ N T+ + K + +AM
Sbjct: 372 NTVTYNALINELCVGGRFSTALKIFHWMEGH-GSLANTQTYNEIIKGLCLGGDIEKAMVL 430
Query: 90 FNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTK----I 144
F K+ + G L V+Y L++ +V A L L++ N +
Sbjct: 431 FEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL----------DLMKENGCEPDEWT 480
Query: 145 YNMILRGWFKMSWWGKCRE---FWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
YN ++ G+ K WGK +++EM + G+ + SY+ +D K GK A+ L K
Sbjct: 481 YNELVSGFSK---WGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLK 537
Query: 202 EMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENG 261
M++ G +V +YN VI + A ++ +M E G P+V+T T+I LC NG
Sbjct: 538 RMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNG 597
Query: 262 RVREAYAVLAEMPKKGCVPDVITYHCFF--RCLE-KPREILGLFDRMIESGIRPKMDTYV 318
R + A+ + +M K+ C+P++ TY C E K E L M G+ P T+
Sbjct: 598 RTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFT 657
Query: 319 MLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGML 365
L+ F G + F++ ++M ++GC P+ Y+ L+ L + +L
Sbjct: 658 SLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKECLL 704
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 165/370 (44%), Gaps = 13/370 (3%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
T TY I L + + L+ RMK PN T+ + + A+G
Sbjct: 302 TVYTYTLPITALCAIEHEEEAIELVARMKKRGCR-PNVQTYTALISGLSRLGKLEVAIGL 360
Query: 90 FNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMI 148
++K+ + GL + V+Y L++ LC A ++ G + T+ YN I
Sbjct: 361 YHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHW------MEGHGSLANTQTYNEI 414
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
++G K +E+M K G + + +Y+ ++ G A +L MK+ G
Sbjct: 415 IKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGC 474
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+ D YN ++ ++ A ++EM E G P+ V+ +I ++G+V A +
Sbjct: 475 EPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALS 534
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+L M + GC P+V +Y+ L K E + D+M+E G+ P + TY L+
Sbjct: 535 LLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLC 594
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
R G + F ++ ME+ C P+ + Y++L+ L +G D A +EM KGL+ P
Sbjct: 595 RNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLA--PD 652
Query: 386 EELGTKLVQG 395
E T L+ G
Sbjct: 653 EVTFTSLIDG 662
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 159/373 (42%), Gaps = 19/373 (5%)
Query: 30 TTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGT 89
TY ++I L + + +++ L H+M +PN T+ + + A+
Sbjct: 337 NVQTYTALISGLSRLGKLEVAIGLYHKMLKE-GLVPNTVTYNALINELCVGGRFSTALKI 395
Query: 90 FNKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI---Y 145
F+ ++ G L + +Y ++ LC + +A L F +++M Y
Sbjct: 396 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVL---------FEKMLKMGPLPTVVTY 446
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N ++ G+ + M + G D +Y+ + K GK A ++EM +
Sbjct: 447 NTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVE 506
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
G+ + V+Y +I VD A+ + + M EMGC P+V + N VI L + R E
Sbjct: 507 CGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSE 566
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLR 322
A + +M ++G +P+VITY L + + +F M + P + TY L+
Sbjct: 567 AEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIY 626
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+ G ++ K+ME G +PDE + +L+D + G +D A M G
Sbjct: 627 GLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMG--C 684
Query: 383 KPREELGTKLVQG 395
KP + L++G
Sbjct: 685 KPNYRTYSVLLKG 697
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 108/228 (47%), Gaps = 3/228 (1%)
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
N +L K R +++M G+ L +++ ++I+ K GK +A + ++ +
Sbjct: 167 NTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ 226
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
+ DV Y ++I + +D A V+ M + GC P+ VT +T+I LC GRV E
Sbjct: 227 YDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDE 286
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLR 322
A +L EM +KG P V TY L E E + L RM + G RP + TY L+
Sbjct: 287 ALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALIS 346
Query: 323 KFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
R G L ++ KM + G P+ YNAL++ L G A K
Sbjct: 347 GLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALK 394
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 178/434 (41%), Gaps = 66/434 (15%)
Query: 10 DWKRALEFFNWVETDCHFTHTTDTYNSVID------------------------------ 39
D + ++FF W+ + H + + S+++
Sbjct: 87 DTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRR 146
Query: 40 -------ILGKFFEFDL------------------SWNLIHRMKDNPSSIPNHATFRIMF 74
I G F F L + NL +M N P+ TF +
Sbjct: 147 VADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQML-NSGIQPSLLTFNTLI 205
Query: 75 KRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQELCFGENKNVGF 133
V EA +++ ++ L +V +Y +L+ C +++ +L FG +
Sbjct: 206 NILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNL----DLAFGVFDRMVK 261
Query: 134 SGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKP 193
G + T Y+ ++ G + + EEM ++G+ +++Y++ + +C
Sbjct: 262 EGCDPNSVT--YSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHE 319
Query: 194 WKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTV 253
+A++L MKK+G + +V Y +I + ++ A+ +Y +M + G P+ VT N +
Sbjct: 320 EEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNAL 379
Query: 254 IKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLEKPRE-ILGLFDRMIESGI 310
I LC GR A + M G + + TY+ + CL E + LF++M++ G
Sbjct: 380 INELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGP 439
Query: 311 RPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARK 370
P + TY L+ + G + + M+E GC PDE+ YN LV G L+ A
Sbjct: 440 LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASF 499
Query: 371 YDEEMFAKGLSAKP 384
Y +EM GL+ P
Sbjct: 500 YFQEMVECGLNPNP 513
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 163/369 (44%), Gaps = 44/369 (11%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRM-KDNPSSI 64
C + AL+ F+W+E +T TYN +I L + + + L +M K P +
Sbjct: 384 CVGGRFSTALKIFHWMEGHGSLANT-QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGP--L 440
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA--- 120
P T+ + Y+T VN A + + E G + DE +Y LV ++ + A
Sbjct: 441 PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFY 500
Query: 121 -QELC-FGENKN-VGFSGLVEMNK-----------------------TKIYNMILRGWFK 154
QE+ G N N V ++ L++ + + YN ++ G K
Sbjct: 501 FQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSK 560
Query: 155 MSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVA 214
+ + + + ++M ++G++ ++ +Y+ +D +C++G+ A K++ +M+K+ ++
Sbjct: 561 ENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 620
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
Y+++I + D A + +EM G P VT ++I GR+ A+ +L M
Sbjct: 621 YSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMV 680
Query: 275 KKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
GC P+ TY + L+K E L ++E I P +D Y + RP+
Sbjct: 681 DMGCKPNYRTYSVLLKGLQK--ECL-----LLEEKIFPLVDNYFLGCNPL---QLHRPIN 730
Query: 335 VVWKKMEEL 343
VV E +
Sbjct: 731 VVSPHKETI 739
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 195 KAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVI 254
+ E+ G + + NT++ + E V+ A +Y++M G QPS++T NT+I
Sbjct: 146 RVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLI 205
Query: 255 KLLCENGRVREAYAVLAEMPKKGCVPDVITY------HCFFRCLEKPREILGLFDRMIES 308
+L + G+VREA +L+++ + PDV TY HC R L+ G+FDRM++
Sbjct: 206 NILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA---FGVFDRMVKE 262
Query: 309 GIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMA 368
G P TY L+ G + + ++M E G P + Y + AL + A
Sbjct: 263 GCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEA 322
Query: 369 RKYDEEMFAKGLSAKPREELGTKLVQG 395
+ M +G +P + T L+ G
Sbjct: 323 IELVARMKKRG--CRPNVQTYTALISG 347
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 165/373 (44%), Gaps = 16/373 (4%)
Query: 3 TLSCYANDW---KRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLS--WNLIHRM 57
TLS N + KR + V+ + DT I G F S L+ RM
Sbjct: 119 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 178
Query: 58 KDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKH 116
PN T+ ++ + A+ NK++ ++ D V + ++D+LC+Y+H
Sbjct: 179 VQRGCQ-PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 237
Query: 117 VIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKD 176
V +A L F E + G V Y+ ++ W + +M ++ + +
Sbjct: 238 VDDALNL-FKEMETKGIRPNVV-----TYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 291
Query: 177 LHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR 236
L +++ +D K GK +A KLY +M K+ I D+ YN+++ + + +D A +++
Sbjct: 292 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 351
Query: 237 EMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR 296
M C P VVT NT+IK C++ RV + + EM +G V D +TY + L
Sbjct: 352 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 411
Query: 297 E---ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYN 353
+ +F +M+ G+ P + TY +LL G L V+ M++ D + Y
Sbjct: 412 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 471
Query: 354 ALVDALIDKGMLD 366
+++ + G +D
Sbjct: 472 TMIEGMCKAGKVD 484
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 170/369 (46%), Gaps = 19/369 (5%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
+N ++ + K +FD+ +L +M+ + T+ I+ + ++ A+ K+
Sbjct: 50 FNKLLSAIAKMKKFDVVISLGEKMQ-RLEIVHGLYTYNILINCFCRRSQISLALALLGKM 108
Query: 94 DEFGLKDE-VSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMN---KTKIYNMIL 149
+ G + V+ +L++ C K + +A L +VEM T + ++
Sbjct: 109 MKLGYEPSIVTLSSLLNGYCHGKRISDAVAL---------VDQMVEMGYRPDTITFTTLI 159
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
G F + + + M +RG +L +Y + ++ +CK G A+ L +M+ I+
Sbjct: 160 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE 219
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAV 269
DVV +NT+I ++ VD A+ +++EM G +P+VVT +++I LC GR +A +
Sbjct: 220 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 279
Query: 270 LAEMPKKGCVPDVITYHCFFRCLEKPREIL---GLFDRMIESGIRPKMDTYVMLLRKFGR 326
L++M +K P+++T++ K + + L+D MI+ I P + TY L+ F
Sbjct: 280 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 339
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPRE 386
L +++ M C PD YN L+ ++ + EM +GL
Sbjct: 340 HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 399
Query: 387 ELGTKLVQG 395
T L+QG
Sbjct: 400 Y--TTLIQG 406
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 134/263 (50%), Gaps = 16/263 (6%)
Query: 33 TYNSVIDIL---GKFFEFD-LSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMG 88
T+N++ID GKF E + L ++I R D P+ T+ + + +++A
Sbjct: 294 TFNALIDAFVKEGKFVEAEKLYDDMIKRSID-----PDIFTYNSLVNGFCMHDRLDKAKQ 348
Query: 89 TFN-KLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNM 147
F + + D V+Y L+ C+ K V + EL F E + G G T Y
Sbjct: 349 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL-FREMSHRGLVG-----DTVTYTT 402
Query: 148 ILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG 207
+++G F ++ +++M GV D+ +YSI +D +C +GK KA++++ M+K
Sbjct: 403 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 462
Query: 208 IKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAY 267
IK+D+ Y T+I + + VD ++ + G +P+VVT NT+I LC ++EAY
Sbjct: 463 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 522
Query: 268 AVLAEMPKKGCVPDVITYHCFFR 290
A+L +M + G +P+ TY+ R
Sbjct: 523 ALLKKMKEDGPLPNSGTYNTLIR 545
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 163/364 (44%), Gaps = 34/364 (9%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY V++ L K + DL+ NL+++M+ + F + V++A+ F +
Sbjct: 189 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIE-ADVVIFNTIIDSLCKYRHVDDALNLFKE 247
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGE-----NKN-VGFSGLVE------- 138
++ G++ + V+Y +L+ LC Y +A +L N N V F+ L++
Sbjct: 248 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 307
Query: 139 ----------MNKTKI------YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
M K I YN ++ G+ K ++ +E M + D+ +Y+
Sbjct: 308 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 367
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ CKS + +L++EM +G+ D V Y T+I+ + D A +V+++M G
Sbjct: 368 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 427
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---L 299
P ++T + ++ LC NG++ +A V M K D+ Y + K ++
Sbjct: 428 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 487
Query: 300 GLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDAL 359
LF + G++P + TY ++ L+ + + KKM+E G P+ YN L+ A
Sbjct: 488 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAH 547
Query: 360 IDKG 363
+ G
Sbjct: 548 LRDG 551
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 82/190 (43%), Gaps = 3/190 (1%)
Query: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255
A+ L+ M K +V +N ++ A+ + D + + +M+ + + T N +I
Sbjct: 31 AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILIN 90
Query: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRP 312
C ++ A A+L +M K G P ++T ++ + + L D+M+E G RP
Sbjct: 91 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 150
Query: 313 KMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYD 372
T+ L+ + +M + GC P+ Y +V+ L +G D+A
Sbjct: 151 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLL 210
Query: 373 EEMFAKGLSA 382
+M A + A
Sbjct: 211 NKMEAAKIEA 220
>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
gi|223945505|gb|ACN26836.1| unknown [Zea mays]
Length = 462
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 173/416 (41%), Gaps = 84/416 (20%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T TYN+V+ L +++ + L+ M N S PN TF + + L++ A+
Sbjct: 7 TYTYNTVLKGLCCAKQWEQAEELMREMIRN-SCHPNEVTFATQIRAFCQNGLLDRAVELL 65
Query: 91 NKLDEFG-LKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
++ ++G D + Y LV+ E+ V EA +L + ++ T YN L
Sbjct: 66 EQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKL---------LNTMLCRPNTVCYNAAL 116
Query: 150 RGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIK 209
+G W + E EM ++ + ++S ++ +C++ AV++ ++M+K G
Sbjct: 117 KGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYM 176
Query: 210 MDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKL------------- 256
DVV+YNT+I D A+++ ++ M C+P ++ N V+K
Sbjct: 177 PDVVSYNTIISCFSDQARADDALKL---LKSMLCKPDTISFNAVLKCLCKAKRWYDAVEL 233
Query: 257 ----------------------LCENGRVREAYAVLAEMPKKGCVPDVITYHC------- 287
LC+NG+V++A V MPK C+PD++TY
Sbjct: 234 VAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSE 293
Query: 288 ---------FFRCLEKPREILG-------------------LFDRMIESGIRPKMDTYVM 319
FR + +I L M+ P T+ +
Sbjct: 294 QGLDEMAFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNI 353
Query: 320 LLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
L+ + G + V+++M + G +PD F YNAL++ ++G LD A K+ M
Sbjct: 354 LISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTM 409
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 151/336 (44%), Gaps = 26/336 (7%)
Query: 53 LIHRM--KDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVD 109
LI M KD P PN ATF + LV A+ ++ ++G + D VSY ++
Sbjct: 131 LIAEMVRKDCP---PNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIIS 187
Query: 110 ALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMD 169
+ +A +L ++ T +N +L+ K W E +M
Sbjct: 188 CFSDQARADDALKL---------LKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKML 238
Query: 170 KRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSE-GV 228
K+ + +++I +D +C++G+ A+++++ M K D+V Y+++I G SE G+
Sbjct: 239 KKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLIN--GFSEQGL 296
Query: 229 DFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF 288
D + R M C+ + + N +K LC R +A ++A+M + C+P+ +T++
Sbjct: 297 D--EMAFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNIL 354
Query: 289 FRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGC 345
L + + ++++M + GI P + TY L+ + G L K + + C
Sbjct: 355 ISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDAL---KFLSTMPC 411
Query: 346 SPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
PD +YN+++ L A K EM K +
Sbjct: 412 EPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCT 447
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 98/209 (46%), Gaps = 6/209 (2%)
Query: 173 VVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAM 232
V D ++Y+ + +C + + +A +L +EM + + V + T IRA + +D A+
Sbjct: 3 VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 62
Query: 233 RVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR-- 290
+ +M + GC P V+ +T++ E+GRV EA +L M C P+ + Y+ +
Sbjct: 63 ELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTM---LCRPNTVCYNAALKGL 119
Query: 291 CLEKPREILG-LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDE 349
C+ E +G L M+ P T+ L+ + + V ++M++ G PD
Sbjct: 120 CIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDV 179
Query: 350 FAYNALVDALIDKGMLDMARKYDEEMFAK 378
+YN ++ D+ D A K + M K
Sbjct: 180 VSYNTIISCFSDQARADDALKLLKSMLCK 208
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 47/180 (26%)
Query: 241 MGCQPSVVTCNTVIKLL-----------------------------------CENGRVRE 265
M P T NTV+K L C+NG +
Sbjct: 1 MPVAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDR 60
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCLE---KPREILGLFDRMIESGIRPKMDTYVMLLR 322
A +L +MPK GC PDVI Y + E L L + M+ RP Y L+
Sbjct: 61 AVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALK 117
Query: 323 KF---GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKG 379
GRW V + +M C P++ ++ L+++L +++ A + E+M G
Sbjct: 118 GLCIAGRW---EEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYG 174
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 143/330 (43%), Gaps = 21/330 (6%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLV-DALCEYKHVIEAQEL 123
P + + + A A+G L G +V CNLV A+C+ V EA L
Sbjct: 144 PTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRL 203
Query: 124 ------CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDL 177
FG +V YN +LRG WG ++ EEM G ++
Sbjct: 204 LRDLLPSFGCEPDV-----------VSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNI 252
Query: 178 HSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYRE 237
++S + +C++G + +++ +M + G DV Y T+I V E ++ A +
Sbjct: 253 VTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNR 312
Query: 238 MREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCF--FRCLEKP 295
M G P+VV NT++K LC R EA +LAEM K C D +T++ F C
Sbjct: 313 MPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGL 372
Query: 296 RE-ILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
+ ++ + ++M+E G P + TY ++ F + G + ++ + M GC P+ +Y
Sbjct: 373 VDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTI 432
Query: 355 LVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
++ L A + +M +G P
Sbjct: 433 VLKGLCSAERWVDAEELMSQMIQQGCPPNP 462
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 151/370 (40%), Gaps = 47/370 (12%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVS-YCNLVDALCEYKHVIEAQEL 123
PN TF + L ++ E G +V Y ++D +C+ + + A+ +
Sbjct: 250 PNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGI 309
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
+ G S YN +L+G W + EM + D +++I
Sbjct: 310 -LNRMPSYGLS-----PNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNIL 363
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYR------- 236
+D +C++G + +++ ++M + G DV+ Y TVI +D A+ + R
Sbjct: 364 VDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGC 423
Query: 237 ----------------------------EMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
+M + GC P+ VT NT+I LC+ G V +A
Sbjct: 424 RPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 483
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+L +M GC PD+I+Y L K E L L + M++ G+ P Y +
Sbjct: 484 LLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALS 543
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPR 385
G + V +++ +++ D YNA++ +L +G D A ++ M + G P
Sbjct: 544 GEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSG--CVPN 601
Query: 386 EELGTKLVQG 395
E T L++G
Sbjct: 602 ESTYTILIRG 611
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 7/241 (2%)
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN ++ G+ + G+ V + ++Y + +C G+ A+ + +M
Sbjct: 82 YNAMVAGYCR---AGQLAAARRLAASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
++G Y+ + A + G A+ V R++ GC V CN V++ +C+ G V
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198
Query: 265 EAYAVLAE-MPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVML 320
EA +L + +P GC PDV++Y+ R L R + L + M+ +G P + T+ L
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ R G V V +M E GC+PD Y ++D + + L++AR M + GL
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGL 318
Query: 381 S 381
S
Sbjct: 319 S 319
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 159/385 (41%), Gaps = 81/385 (21%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKL 93
Y ++ID + K +++ +++RM S PN + + K +A EA G ++
Sbjct: 290 YATIIDGVCKEERLEVARGILNRMPSYGLS-PNVVCYNTLLKGLCSADRWEEAEGLLAEM 348
Query: 94 -DEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGW 152
D+ D+V++ LVD LC+ +GLV+
Sbjct: 349 FDKDCPLDDVTFNILVDFLCQ--------------------NGLVD-------------- 374
Query: 153 FKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDV 212
+ E E+M + G + D+ +Y+ ++ CK G +AV L + M G + +
Sbjct: 375 -------RVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNT 427
Query: 213 VAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAE 272
V+Y V++ + +E A + +M + GC P+ VT NT+I LC+ G V +A +L +
Sbjct: 428 VSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 487
Query: 273 MPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
M GC PD+I+Y L K E L L + M++ G+ P Y + G
Sbjct: 488 MLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGR 547
Query: 330 LRPVFVVWKKMEEL-----------------------------------GCSPDEFAYNA 354
+ V +++ +++ GC P+E Y
Sbjct: 548 INKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTI 607
Query: 355 LVDALIDKGMLDMARKYDEEMFAKG 379
L+ L +G + A++ E+ +KG
Sbjct: 608 LIRGLASEGFVKEAQEILTELCSKG 632
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 130/292 (44%), Gaps = 17/292 (5%)
Query: 6 CYANDWKRALEFF-NWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C A+ W+ A + DC T +N ++D L + D ++ +M ++ +
Sbjct: 333 CSADRWEEAEGLLAEMFDKDCPLDDVT--FNILVDFLCQNGLVDRVIEVLEQMLEH-GCM 389
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ + + L++EA+ + G + + VSY ++ LC + ++A+EL
Sbjct: 390 PDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEEL 449
Query: 124 CFGENKNVGFSGLVEMN---KTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSY 180
S +++ +N ++ K + E ++M G DL SY
Sbjct: 450 ---------MSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 500
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
S +D + K+G +A++L M KKG+ + + Y+++ A+ ++ ++++ +++
Sbjct: 501 STVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQD 560
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL 292
+ V N VI LC+ G A LA M GCVP+ TY R L
Sbjct: 561 TTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGL 612
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 159/356 (44%), Gaps = 13/356 (3%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T YN ++++L + + L ++ M P+ TF + K AH V A+
Sbjct: 146 TVVYNHLLNVLVEGSKMKLLESVYSEMGARGIK-PDVVTFNTLMKALCRAHQVRTAVLML 204
Query: 91 NKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI-YNMI 148
++ G+ DE ++ L+ E + IEA +G S TK+ N++
Sbjct: 205 EEMSSRGVAPDETTFTTLMQGFVE-EGSIEAALRVKARMLEMGCSA------TKVTVNVL 257
Query: 149 LRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGI 208
+ G+ K+ + ++ G D +Y+ +++ +C++ A+K+ M ++G
Sbjct: 258 INGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 317
Query: 209 KMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYA 268
DV YN V+ + + ++ A + +M + GC P + T NT+I LC R+ EA
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALD 377
Query: 269 VLAEMPKKGCVPDVITYHCFFRCLEK---PREILGLFDRMIESGIRPKMDTYVMLLRKFG 325
+ ++ KG PDV T++ L K P L LF+ M SG P TY L+
Sbjct: 378 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 437
Query: 326 RWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G L + K ME GC YN ++D L K ++ A + ++M +G+S
Sbjct: 438 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 493
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 156/335 (46%), Gaps = 11/335 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TYN V++ L K + + + ++++M D +P+ TF + T + + EA+ +
Sbjct: 323 TYNIVVNCLCKNGQLEEAKGILNQMVDR-GCLPDITTFNTLIAALCTGNRLEEALDLARQ 381
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G+ +V N L++ALC+ A L F E KN G + YN ++
Sbjct: 382 VTVKGVSPDVYTFNILINALCKVGDPHLALRL-FEEMKNSGCT-----PDEVTYNTLIDN 435
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ GK + ++M+ G + +Y+ +D +CK + +A +++ +M +GI +
Sbjct: 436 LCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 495
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
+ +NT+I + + +D A + +M G QP+ +T N+++ C+ G +++A +L
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 555
Query: 272 EMPKKGCVPDVITYHCFFRCLEKP---REILGLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
M G DV+TY L K + L + M G+RP Y +L+ R
Sbjct: 556 TMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRN 615
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKG 363
+R ++++M E+G PD Y + L G
Sbjct: 616 NIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGG 650
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 151/361 (41%), Gaps = 55/361 (15%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC--- 124
T ++ Y V +A+G + G + D+++Y V+ LC+ HV A ++
Sbjct: 253 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 312
Query: 125 --FGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
G + +V F+ YN+++ K + + +M RG + D+ +++
Sbjct: 313 VQEGHDPDV-FT----------YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNT 361
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
+ +C + +A+ L +++ KG+ DV +N +I A+ A+R++ EM+ G
Sbjct: 362 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 421
Query: 243 CQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCL------EKPR 296
C P VT NT+I LC G++ +A +L +M GC ITY+ L E+
Sbjct: 422 CTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAE 481
Query: 297 EI--------------------------------LGLFDRMIESGIRPKMDTYVMLLRKF 324
E+ GL ++MI G++P TY +L +
Sbjct: 482 EVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHY 541
Query: 325 GRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKP 384
+ G ++ + + M G D Y L++ L G +A K M KG+ P
Sbjct: 542 CKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTP 601
Query: 385 R 385
+
Sbjct: 602 K 602
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 146/307 (47%), Gaps = 18/307 (5%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDN--PSS 63
C D AL F ++ + T TYN++ID L + + +L+ M+ P S
Sbjct: 402 CKVGDPHLALRLFEEMK-NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQE 122
T+ + + EA F+++D G+ ++ +++ L+D LC+ K + +A
Sbjct: 461 T---ITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDA-- 515
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
FG + GL N T YN IL + K K + E M G D+ +Y
Sbjct: 516 --FGLINQMISEGLQPNNIT--YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 571
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMG 242
++ +CK+G+ A+K+ + M+ KG++ AYN V++++ + A+ ++REM E+G
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631
Query: 243 CQPSVVTCNTVIKLLCENG-RVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGL 301
P +T V + LC G ++EA+ + EM KG +P+ + FR L + LG+
Sbjct: 632 EPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSS----FRMLAEGLLNLGM 687
Query: 302 FDRMIES 308
D I +
Sbjct: 688 DDYFIRA 694
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 112/248 (45%), Gaps = 38/248 (15%)
Query: 172 GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAV--------- 222
G+ D Y+ ++++ + K +Y EM +GIK DVV +NT+++A+
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200
Query: 223 ----------GVS---------------EG-VDFAMRVYREMREMGCQPSVVTCNTVIKL 256
GV+ EG ++ A+RV M EMGC + VT N +I
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260
Query: 257 LCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPK 313
C+ GRV +A + + G PD ITY+ F L + + L + D M++ G P
Sbjct: 261 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320
Query: 314 MDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDE 373
+ TY +++ + G L + +M + GC PD +N L+ AL L+ A
Sbjct: 321 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 380
Query: 374 EMFAKGLS 381
++ KG+S
Sbjct: 381 QVTVKGVS 388
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 73/173 (42%), Gaps = 5/173 (2%)
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEM- 273
Y +IR +G +D + EMR G Q + ++ + +A ++
Sbjct: 77 YEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQL 136
Query: 274 -PKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGF 329
P G D + Y+ L K + + ++ M GI+P + T+ L++ R
Sbjct: 137 QPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQ 196
Query: 330 LRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
+R ++ ++M G +PDE + L+ +++G ++ A + M G SA
Sbjct: 197 VRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSA 249
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 165/387 (42%), Gaps = 40/387 (10%)
Query: 25 CHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVN 84
CH TH T ++ + +IL + + PN T + K +
Sbjct: 109 CHLTHITFAFSVLANILKRGYH------------------PNAITLNTLIKGLCFRGEIK 150
Query: 85 EAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVG-----FSGLVE 138
+A+ +++ G + ++VSY L++ LC+ GE K V G
Sbjct: 151 KALYFHDQVVAQGFQLNQVSYRTLINGLCKT-----------GETKAVARLLRKLEGHSV 199
Query: 139 MNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVK 198
+YN I+ K G + + EM +G+ ++ +Y+ + C G +A
Sbjct: 200 KPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFS 259
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
L EMK K I DV +NT+I A+G + A V M + +P VVT N++I
Sbjct: 260 LLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYF 319
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMD 315
+V+ A V M + G P+V TY L K + E + LF+ M + P +
Sbjct: 320 FLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIV 379
Query: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375
TY L+ + L + KKM+E G PD ++Y L+DAL G L+ A+++ + +
Sbjct: 380 TYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRL 439
Query: 376 FAKG--LSAKPREELGTKLVQGGLDGE 400
KG L+ + + L + L GE
Sbjct: 440 LVKGYHLNVQTYNVMINGLCKADLFGE 466
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 178/420 (42%), Gaps = 79/420 (18%)
Query: 28 THTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAM 87
T TY ++ID L K D + +L MK + IP+ T+ + H + A+
Sbjct: 340 TPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYK-NMIPDIVTYTSLIDGLCKNHHLERAI 398
Query: 88 GTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQE-----LCFGENKNVGFSGLVEMNK 141
K+ E G++ +V SY L+DALC+ + A+E L G + NV
Sbjct: 399 ALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNV---------- 448
Query: 142 TKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYK 201
+ YN+++ G K +G+ + +M+ +G + D ++ + + + + KA K+ +
Sbjct: 449 -QTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILR 507
Query: 202 EMKKKG-----------------------IKMDVVAYNTVIRA----------------- 221
EM +G IK DVV Y T++
Sbjct: 508 EMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSM 567
Query: 222 --VGVS----------------EGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRV 263
+GV+ + VD AM ++ EM+ P++VT ++I LC+N +
Sbjct: 568 AQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHL 627
Query: 264 REAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILG---LFDRMIESGIRPKMDTYVML 320
A A+L EM + G PDV +Y L K + G +F R++ G + Y +
Sbjct: 628 ERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAM 687
Query: 321 LRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
+ + + G + KME+ GC PD ++ ++ AL +K D A K EM A+GL
Sbjct: 688 INELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGL 747
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 151/325 (46%), Gaps = 18/325 (5%)
Query: 65 PNHATFRIMFKRYVTAHLVNE-----AMGTFNKLDEFGLKDEVSYCN-LVDALCEYKHVI 118
P TF Y+ + LVN + F K + G ++ N L++ C H+
Sbjct: 59 PPPPTFHF---NYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHIT 115
Query: 119 EAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLH 178
A + K + +N T I + RG K + + F +++ +G +
Sbjct: 116 FAFSVLANILKRGYHPNAITLN-TLIKGLCFRGEIKKALY-----FHDQVVAQGFQLNQV 169
Query: 179 SYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREM 238
SY ++ +CK+G+ +L ++++ +K DVV YNT+I ++ ++ + A +Y EM
Sbjct: 170 SYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEM 229
Query: 239 REMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI 298
G P+VVT N ++ C G ++EA+++L EM K PDV T++ L K ++
Sbjct: 230 IVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKM 289
Query: 299 LG---LFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNAL 355
+ M+++ I+P + TY L+ + ++ V+ M + G +P+ Y +
Sbjct: 290 KAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTM 349
Query: 356 VDALIDKGMLDMARKYDEEMFAKGL 380
+D L + M+D A EEM K +
Sbjct: 350 IDGLCKEKMVDEAMSLFEEMKYKNM 374
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 104/466 (22%), Positives = 194/466 (41%), Gaps = 93/466 (19%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C+ + K+AL F + V F +Y ++I+ L K E L+ +++ + S P
Sbjct: 144 CFRGEIKKALYFHDQVVAQ-GFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGH-SVKP 201
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQELC 124
+ + + L+ +A ++++ G+ + V+Y LV C H+ EA L
Sbjct: 202 DVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLL 261
Query: 125 FGEN-KNVG-----FSGLVE-------MNKTKI----------------YNMILRGWFKM 155
KN+ F+ L++ M KI YN ++ G+F +
Sbjct: 262 NEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFL 321
Query: 156 SWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAY 215
+ + + M + GV ++ +Y+ +D +CK +A+ L++EMK K + D+V Y
Sbjct: 322 NKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTY 381
Query: 216 NTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREA--------- 266
++I + + ++ A+ + ++M+E G QP V + ++ LC+ GR+ A
Sbjct: 382 TSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLV 441
Query: 267 ---------YAVL-----------------AEMPKKGCVPDVITYHCFFRCL------EK 294
Y V+ ++M KGC+PD IT+ L +K
Sbjct: 442 KGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDK 501
Query: 295 PREIL------GLFDR--------------MIESGIRPKMDTYVMLLRKFGRWGFLRPVF 334
+IL GL + M ++ I+P + TY L+ + L+
Sbjct: 502 AEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAK 561
Query: 335 VVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
V+ M ++G +P+ Y ++D L K +D A EEM K +
Sbjct: 562 YVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNM 607
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 3/170 (1%)
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
+N ++ ++ ++ + ++++ G P + T N ++ C + A++VLA +
Sbjct: 66 FNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANIL 125
Query: 275 KKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
K+G P+ IT + + L EI L D+++ G + +Y L+ + G +
Sbjct: 126 KRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETK 185
Query: 332 PVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
V + +K+E PD YN ++ +L +L A EM KG+S
Sbjct: 186 AVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGIS 235
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 165/355 (46%), Gaps = 13/355 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
+YN++I+ L K + + L+ M + PN T + ++EAM
Sbjct: 35 SYNTLINGLCKAKKLKEAVGLLLEM-EAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEA 93
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + G D V Y L+ C ++ +EL F E G S V Y+ ++ G
Sbjct: 94 MKKKGFDADVVLYGTLISGFCNNGNLDRGKEL-FDEMLGKGISANV-----VTYSCLVHG 147
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
++ W + M + G+ D+ +Y+ +D +CK G+ A+ L M +KG +
Sbjct: 148 LCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPS 207
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V YN ++ + V A ++ R M E G + VVT NT++K LC+ G+V EA +
Sbjct: 208 NVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFN 267
Query: 272 EM-PKKGCV-PDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGR 326
M + C+ P+V T++ L K + + + +M++ G + TY MLL +
Sbjct: 268 SMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLK 327
Query: 327 WGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLS 381
G ++ +WK++ +LG P+ F Y+ L+D ML++A+ EM GL+
Sbjct: 328 AGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLN 382
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 173/381 (45%), Gaps = 16/381 (4%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHT-TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSI 64
C WK A N + H H TY +ID L K + +L++ M +
Sbjct: 149 CRLGQWKEANTVLNAMAE--HGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEE- 205
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEAQEL 123
P++ T+ ++ LV +A + E G K D V+Y L+ LC+ V EA +L
Sbjct: 206 PSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKL 265
Query: 124 --CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYS 181
+N+N +E N +NM++ G K K + +M K+G +L +Y+
Sbjct: 266 FNSMFDNENC-----LEPN-VFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYN 319
Query: 182 IYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREM 241
+ + K+GK +A++L+K++ G + Y+ +I ++ A ++ EMR
Sbjct: 320 MLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTH 379
Query: 242 GCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPRE---I 298
G P++ NT++ LC+ G + +A ++ EM C PD+I+++ K + +
Sbjct: 380 GLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFV 439
Query: 299 LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDA 358
L +M+E G+RP T+ L+ + + G L ++M G +PD Y++L+
Sbjct: 440 KELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKG 499
Query: 359 LIDKGMLDMARKYDEEMFAKG 379
L KG +M AKG
Sbjct: 500 LSSKGDTTEIINLLHQMAAKG 520
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 103/205 (50%), Gaps = 9/205 (4%)
Query: 181 SIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMRE 240
+I + +C++G ++A+ L +EM +K + D+V+YNT+I + ++ + A+ + EM
Sbjct: 2 NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61
Query: 241 MGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITY------HCFFRCLEK 294
GC P+ VTC T++ LC++GR+ EA +L M KKG DV+ Y C L++
Sbjct: 62 AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121
Query: 295 PREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNA 354
+E LFD M+ GI + TY L+ R G + V M E G PD Y
Sbjct: 122 GKE---LFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTG 178
Query: 355 LVDALIDKGMLDMARKYDEEMFAKG 379
L+D L G A M KG
Sbjct: 179 LIDGLCKDGRATHAMDLLNLMVEKG 203
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 103/241 (42%), Gaps = 9/241 (3%)
Query: 54 IHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFG-LKDEVSYCNLVDALC 112
IHR S N T+ ++ + A + EAM + ++ + G + + +Y L+D C
Sbjct: 302 IHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFC 361
Query: 113 EYKHVIEAQELCFGENKNVGFS-GLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKR 171
+ + + A+ L F E + G + L + YN ++ K + + ++EM
Sbjct: 362 KMRMLNIAKGL-FCEMRTHGLNPALFD------YNTLMASLCKEGSLEQAKSLFQEMGNA 414
Query: 172 GVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFA 231
D+ S++ +D K+G +L +M + G++ D + ++T+I + +D A
Sbjct: 415 NCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEA 474
Query: 232 MRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRC 291
M G P + ++++K L G E +L +M KG V D C
Sbjct: 475 KSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTC 534
Query: 292 L 292
L
Sbjct: 535 L 535
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 160/355 (45%), Gaps = 18/355 (5%)
Query: 34 YNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP-NHATFRIMFKRYVTAHLVNEAMGTFNK 92
+N ++ ++ + DL +L +M+ IP + +F I+ K + + + A+ TF K
Sbjct: 80 FNKLMGVVVRMERPDLVISLYQKMERK--QIPCDVYSFNILIKCFCSCSKLPFALSTFGK 137
Query: 93 LDEFGLK-DEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ + G + D V++ L+ LC V EA +L F + N + ++ G
Sbjct: 138 ITKLGFQPDVVTFSTLLHGLCVEDRVSEALDL---------FHQMCRPNVVT-FTTLMNG 187
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKG-IKM 210
+ + + M + G+ + +Y +D MCK G A+ L ++M++ IK
Sbjct: 188 LCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKP 247
Query: 211 DVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVL 270
+VV Y+ +I + A +Y EM+E G P + T N +I C +GR EA +L
Sbjct: 248 NVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLL 307
Query: 271 AEMPKKGCVPDVITYHCFFRCLEKPR---EILGLFDRMIESGIRPKMDTYVMLLRKFGRW 327
EM ++ P+V+TY K R E L+D M+ GI P TY ++ F +
Sbjct: 308 QEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQ 367
Query: 328 GFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSA 382
L ++ M GCSPD F +N L+D +D + EM GL A
Sbjct: 368 NRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVA 422
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 179/420 (42%), Gaps = 51/420 (12%)
Query: 6 CYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIP 65
C + AL F + T F T+++++ L + +L H+M P
Sbjct: 123 CSCSKLPFALSTFGKI-TKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM-----CRP 176
Query: 66 NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK-DEVSYCNLVDALCEYKHVIEA---- 120
N TF + V EA+ +++ E GL+ ++++Y +VD +C+ + A
Sbjct: 177 NVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLL 236
Query: 121 ---QELCFGENKNVGFSGLV-----------------EMNKTKI------YNMILRGWFK 154
+E+ + V +S ++ EM + I YN ++ G+
Sbjct: 237 RKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCS 296
Query: 155 MSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVA 214
W + + +EM +R + ++ +YS ++ K K ++A +LY EM +GI + +
Sbjct: 297 SGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTIT 356
Query: 215 YNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMP 274
YN++I +D A ++ M GC P V T NT+I C R+ + +L EM
Sbjct: 357 YNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMT 416
Query: 275 KKGCVPDVITYHCFFR--CLEKP-REILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLR 331
+ G V D TY+ CL L L +MI SG+ P + T LL G L+
Sbjct: 417 ETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 476
Query: 332 PVFVVWKKMEEL-----------GCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGL 380
++K M++ G PD YN L+ LI++G A + +EM +G+
Sbjct: 477 DALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGI 536
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 159/370 (42%), Gaps = 33/370 (8%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
TY +++D + K + + NL+ +M++ PN + + ++A + +
Sbjct: 215 TYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTE 274
Query: 93 LDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKI------Y 145
+ E G+ D +Y ++D C EAQ L L EM + KI Y
Sbjct: 275 MQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRL------------LQEMLERKINPNVVTY 322
Query: 146 NMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKK 205
+ ++ + K + + E ++EM RG++ + +Y+ +D CK + A ++ M
Sbjct: 323 SALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMAT 382
Query: 206 KGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVRE 265
KG DV +NT+I ++ +D + EM E G T NT+I C G +
Sbjct: 383 KGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNA 442
Query: 266 AYAVLAEMPKKGCVPDVITYHCFFRCL---EKPREILGLFDRMIES-----------GIR 311
A + +M G PD++T + L K ++ L +F M +S G+
Sbjct: 443 ALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVE 502
Query: 312 PKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKY 371
P + TY +L+ G ++K+M G P+ Y+++++ L + LD A +
Sbjct: 503 PDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQM 562
Query: 372 DEEMFAKGLS 381
+ M +K S
Sbjct: 563 FDSMGSKSFS 572
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 147/328 (44%), Gaps = 23/328 (7%)
Query: 64 IPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEV-SYCNLVDALCEYKHVIEAQE 122
IPN T+ M + + ++ A F + G +V ++ L+D C K + + E
Sbjct: 351 IPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTE 410
Query: 123 LCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSI 182
L + +GLV T YN ++ G+ + + ++M GV D+ + +
Sbjct: 411 LLHEMTE----TGLVA--DTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNT 464
Query: 183 YMDIMCKSGKPWKAVKLYKEMKKK-----------GIKMDVVAYNTVIRAVGVSEGVDF- 230
+D +C +GK A++++K M+K G++ DV YN +I + ++EG
Sbjct: 465 LLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGL-INEGKFLE 523
Query: 231 AMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR 290
A +Y+EM G P+ +T +++I LC+ R+ EA + M K PDV+T++
Sbjct: 524 AEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVS 583
Query: 291 CLEKPREI---LGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
K + L LF M GI TY+ L+ F + G + ++++M G P
Sbjct: 584 GYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYP 643
Query: 348 DEFAYNALVDALIDKGMLDMARKYDEEM 375
D +++ L K L A E++
Sbjct: 644 DTITIRSMLTVLWSKEELKRAVAMLEDL 671
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 135/306 (44%), Gaps = 22/306 (7%)
Query: 31 TDTYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTF 90
T TYNS+ID K D + ++ + M S P+ TF + Y A +++
Sbjct: 354 TITYNSMIDGFCKQNRLDAAEHMFYVMATKGCS-PDVFTFNTLIDGYCGAKRIDDGTELL 412
Query: 91 NKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMIL 149
+++ E GL D +Y L+ C + A +L ++ + SG+ T N +L
Sbjct: 413 HEMTETGLVADTTTYNTLIHGFCLVGDLNAALDL----SQQMISSGVCPDIVT--CNTLL 466
Query: 150 RGWFKMSWWGKCREFWEEMDK-----------RGVVKDLHSYSIYMDIMCKSGKPWKAVK 198
G E ++ M K GV D+ +Y+I + + GK +A +
Sbjct: 467 DGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEE 526
Query: 199 LYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLC 258
LYKEM +GI + + Y+++I + +D A +++ M P VVT NT++ C
Sbjct: 527 LYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYC 586
Query: 259 ENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI---LGLFDRMIESGIRPKMD 315
+ GRV + + EM ++G V D ITY K I L +F MI SG+ P
Sbjct: 587 KAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTI 646
Query: 316 TYVMLL 321
T +L
Sbjct: 647 TIRSML 652
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 126/260 (48%), Gaps = 18/260 (6%)
Query: 126 GENKNVGFSGLVEMNKTKIYNMILR-GWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYM 184
GE+ GF G ++ LR G+ ++ + + +M + + + ++ M
Sbjct: 34 GESGEAGFRG---------ESLKLRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLM 84
Query: 185 DIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQ 244
++ + +P + LY++M++K I DV ++N +I+ + FA+ + ++ ++G Q
Sbjct: 85 GVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQ 144
Query: 245 PSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFR--CLE-KPREILGL 301
P VVT +T++ LC RV EA + +M C P+V+T+ C E + E + L
Sbjct: 145 PDVVTFSTLLHGLCVEDRVSEALDLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVAL 200
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELG-CSPDEFAYNALVDALI 360
DRM+E G++P TY ++ + G + +KMEE+ P+ Y+A++D L
Sbjct: 201 LDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLW 260
Query: 361 DKGMLDMARKYDEEMFAKGL 380
G A EM KG+
Sbjct: 261 KDGRHSDAHNLYTEMQEKGI 280
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 122/274 (44%), Gaps = 11/274 (4%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
T+N++ID D L+H M + + + T+ + + +N A+ +
Sbjct: 391 TFNTLIDGYCGAKRIDDGTELLHEMTET-GLVADTTTYNTLIHGFCLVGDLNAALDLSQQ 449
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNV-------GFSGLVEMNKTKI 144
+ G+ ++ CN L+D LC+ + +A E+ K+ F+G VE + +
Sbjct: 450 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNG-VEPD-VQT 507
Query: 145 YNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMK 204
YN+++ G + + E ++EM RG+V + +YS ++ +CK + +A +++ M
Sbjct: 508 YNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMG 567
Query: 205 KKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVR 264
K DVV +NT++ + VD + ++ EM G +T T+I + G +
Sbjct: 568 SKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNIN 627
Query: 265 EAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREI 298
A + EM G PD IT L E+
Sbjct: 628 GALDIFQEMISSGVYPDTITIRSMLTVLWSKEEL 661
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 79/179 (44%), Gaps = 17/179 (9%)
Query: 65 PNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGL-KDEVSYCNLVDALCEYKHVIEAQEL 123
P+ T+ I+ + EA + ++ G+ + ++Y ++++ LC+ + EA ++
Sbjct: 503 PDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQM 562
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F + FS V +N ++ G+ K E + EM +RG+V D +Y
Sbjct: 563 -FDSMGSKSFSPDV-----VTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITL 616
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVI----------RAVGVSEGVDFAM 232
+ K G A+ +++EM G+ D + +++ RAV + E + +M
Sbjct: 617 IHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQMSM 675
>gi|225424625|ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial [Vitis vinifera]
gi|296081374|emb|CBI16807.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 164/369 (44%), Gaps = 14/369 (3%)
Query: 33 TYNSVIDILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNK 92
YN +++L + D++ ++ M + P+ T+ I+ A + A+ +
Sbjct: 116 AYNIYLNLLCCENQLDVALGVVQTMVEKGRE-PDIVTYTIVINGLCRAGRFDSAVEIWRN 174
Query: 93 LDEFGLKDEVSYCN-LVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRG 151
+ G + C LV LC V A EL G G ++ +K+ IYN ++ G
Sbjct: 175 MVRKGFSPDEKACRALVLGLCHDGKVDLAYELTVG-----AMRGRIKFSKS-IYNSLING 228
Query: 152 WFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMD 211
+ + W K + M + G DL +Y++ ++ C +A L K+M++ G++ D
Sbjct: 229 FCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPD 288
Query: 212 VVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLA 271
V +YN +++ + + +D A + E VV+ NT+IK LC + AY +
Sbjct: 289 VYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFE 348
Query: 272 EMPKKGCVPDVITYHCFFRCL--EKPREIL-GLFDRMIESGIRPKMDTYVMLLRKFGRWG 328
EM KG PDV+T+ + E I L D+M G+ P Y ++ + G
Sbjct: 349 EMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTG 408
Query: 329 FLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREEL 388
+ V+ M E G +PD +YNAL++ L + A E+M G +E+
Sbjct: 409 KMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCP---DEV 465
Query: 389 GTKLVQGGL 397
KL+ GGL
Sbjct: 466 TFKLIIGGL 474
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 144/320 (45%), Gaps = 17/320 (5%)
Query: 69 TFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKD-EVSYCNLVDALCEYKHVIEAQELCFGE 127
+R YV A L+++A+ TF+++ + + + Y + L A++ +
Sbjct: 11 AYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQY-YDR 69
Query: 128 NKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIM 187
GFS +N + Y+ + G K+ + + E+MD+ G V D+ +Y+IY++++
Sbjct: 70 MIPQGFS----LN-SFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLL 124
Query: 188 CKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSV 247
C + A+ + + M +KG + D+V Y VI + + D A+ ++R M G P
Sbjct: 125 CCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDE 184
Query: 248 VTCNTVIKLLCENGRVREAYAVLAEMPK------KGCVPDVITYHCFFRCLEKPREILGL 301
C ++ LC +G+V AY + + K +I C ++K + I+
Sbjct: 185 KACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISF 244
Query: 302 FDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALID 361
R +G P + TY +LL L + KKME G PD ++YN L+ L
Sbjct: 245 MRR---NGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCK 301
Query: 362 KGMLDMA-RKYDEEMFAKGL 380
LD A +M AKGL
Sbjct: 302 ANRLDKAYMMMVNKMEAKGL 321
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 7/218 (3%)
Query: 65 PNHATFRIMFKRYVTAHLVNEA-MGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQEL 123
P+ ++ + K A+ +++A M NK++ GL D VSY ++ ALC H A +L
Sbjct: 287 PDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKL 346
Query: 124 CFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIY 183
F E G + V + ++++ + + ++ ++M G++ D Y+
Sbjct: 347 -FEEMGGKGITPDV-----VTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTI 400
Query: 184 MDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGC 243
+D +CK+GK A ++ +M + GI DVV+YN +I + + V AM +Y +M G
Sbjct: 401 VDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGP 460
Query: 244 QPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD 281
P VT +I L ++ A V +M +KG D
Sbjct: 461 CPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLD 498
>gi|224141281|ref|XP_002324003.1| predicted protein [Populus trichocarpa]
gi|222867005|gb|EEF04136.1| predicted protein [Populus trichocarpa]
Length = 626
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 176/419 (42%), Gaps = 62/419 (14%)
Query: 1 RETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVIDILGKFFEFDLSWN----LIHR 56
R L C + D AL FFNWV+ D +T Y ++ +L EF+ + LI
Sbjct: 101 RVLLRCQS-DSVSALTFFNWVKNDLGLKPSTLNYCLILHVLAWSKEFEQAMKFLTELILL 159
Query: 57 MKDNPSSIP------------NHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLKDEVSY 104
+KD + + F ++ K YV A ++ E TF ++ E G V
Sbjct: 160 VKDTDEDVFQCLFLCCQDCNWDPIIFDLLLKAYVKAGMIKEGFRTFMQILEVGYVPSVIA 219
Query: 105 CNLVDALCEYKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREF 164
CN +L G K + C
Sbjct: 220 CN----------------------------------------YLLNGLLKSNHIHLCWHV 239
Query: 165 WEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGV 224
+ EM + GV+ + ++++I + CK G K ++M+++G + D+V YNT+I
Sbjct: 240 YGEMGRVGVIPNSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCG 299
Query: 225 SEGVDFAMRVYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPDVIT 284
+ A +YR M P +V+ ++ LC+ GRVREA+ +L M +G PDV++
Sbjct: 300 RGRLSDAFYLYRIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVS 359
Query: 285 YHCFF--RCLE-KPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKME 341
Y+ C E K E L MI +GI P T +L++ + + G+L + ++E
Sbjct: 360 YNTLICGYCKEGKMLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISALNLVVELE 419
Query: 342 ELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGGLDGE 400
+ G S Y+ LV +L ++ A+ E M +G P E+ KL++ G+
Sbjct: 420 KFGVSISPDIYDYLVASLCEEDRPFAAKTLLERMSQRGYI--PHVEIYNKLIESLCKGD 476
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 134/312 (42%), Gaps = 31/312 (9%)
Query: 70 FRIMFKRYVTAHLVN---------------EAMGTFNKLDEFGLK-DEVSYCNLVDALCE 113
+RIM++R V LV+ EA +++ GL D VSY L+ C+
Sbjct: 310 YRIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICGYCK 369
Query: 114 YKHVIEAQELCFGENKNVGFSGLVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGV 173
++E++ L + N F + ++++G+ K W E++K GV
Sbjct: 370 EGKMLESKSLLYEMIGNGIFP------DSFTCRVLIQGYRKEGWLISALNLVVELEKFGV 423
Query: 174 VKDLHSYSIYMDIMCKSGKPWKAVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMR 233
Y + +C+ +P+ A L + M ++G V YN +I ++ + V A+
Sbjct: 424 SISPDIYDYLVASLCEEDRPFAAKTLLERMSQRGYIPHVEIYNKLIESLCKGDCVADALS 483
Query: 234 VYREMREMGCQPSVVTCNTVIKLLCENGRVREAYAVLAEMPKKGCVPD------VITYHC 287
+ E+ P+++T +I+ LC GR EA ++ EM G PD +I +C
Sbjct: 484 LKAEIVVGNINPNLLTYKALIRCLCRMGRSIEAEKLMEEMLHFGLQPDPEICRAMIHGYC 543
Query: 288 FFRCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVWKKMEELGCSP 347
+ K +L LF + + ++Y L+R G + + ++M ++G +P
Sbjct: 544 REKDAGKAESLLVLFAKEFQIF---DSESYSTLVRIVCEDGDVAKFMELQERMLKVGFAP 600
Query: 348 DEFAYNALVDAL 359
+ ++D L
Sbjct: 601 NSLTCKYMIDGL 612
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.139 0.443
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,500,735,875
Number of Sequences: 23463169
Number of extensions: 276367591
Number of successful extensions: 883013
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5759
Number of HSP's successfully gapped in prelim test: 4527
Number of HSP's that attempted gapping in prelim test: 748189
Number of HSP's gapped (non-prelim): 59550
length of query: 403
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 258
effective length of database: 8,957,035,862
effective search space: 2310915252396
effective search space used: 2310915252396
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 78 (34.7 bits)