Query 041815
Match_columns 475
No_of_seqs 369 out of 1818
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 18:47:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041815.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041815hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yuw_A Heat shock cognate 71 k 100.0 3.2E-76 1.1E-80 616.1 45.1 463 6-469 3-482 (554)
2 4b9q_A Chaperone protein DNAK; 100.0 9.9E-76 3.4E-80 618.0 46.2 455 7-471 2-482 (605)
3 3d2f_A Heat shock protein homo 100.0 2.1E-75 7.1E-80 619.7 43.7 398 7-407 2-404 (675)
4 2kho_A Heat shock protein 70; 100.0 1.9E-74 6.5E-79 608.2 37.2 454 7-470 2-481 (605)
5 3i33_A Heat shock-related 70 k 100.0 2.6E-68 8.8E-73 539.1 45.2 380 6-386 22-403 (404)
6 2v7y_A Chaperone protein DNAK; 100.0 6.6E-68 2.3E-72 549.2 42.4 428 7-470 2-450 (509)
7 3qfu_A 78 kDa glucose-regulate 100.0 5.1E-67 1.7E-71 528.1 44.5 377 7-385 18-394 (394)
8 4gni_A Putative heat shock pro 100.0 2.9E-65 1E-69 517.3 43.2 378 6-386 12-403 (409)
9 1dkg_D Molecular chaperone DNA 100.0 4E-64 1.4E-68 504.9 41.1 373 7-385 2-383 (383)
10 1jce_A ROD shape-determining p 100.0 4.7E-44 1.6E-48 353.6 24.3 310 7-385 3-327 (344)
11 2ych_A Competence protein PILM 100.0 2.3E-30 7.7E-35 258.8 12.7 311 6-372 12-342 (377)
12 2fsj_A Hypothetical protein TA 100.0 2.6E-30 9E-35 254.3 12.0 229 119-382 96-343 (346)
13 3h1q_A Ethanolamine utilizatio 100.0 1.3E-28 4.4E-33 234.9 21.8 202 122-381 71-272 (272)
14 4a2a_A Cell division protein F 100.0 6.6E-28 2.2E-32 242.3 22.1 200 156-384 167-394 (419)
15 1k8k_A ARP3, actin-like protei 100.0 4E-28 1.4E-32 245.7 18.4 227 143-382 107-386 (418)
16 2fxu_A Alpha-actin-1, actin, a 100.0 3.7E-28 1.3E-32 242.2 16.5 302 7-382 5-348 (375)
17 2zgy_A Plasmid segregation pro 99.9 2.8E-24 9.7E-29 209.5 14.4 226 118-381 74-319 (320)
18 1k8k_B ARP2, actin-like protei 99.9 1.9E-23 6.4E-28 209.3 4.1 221 144-382 105-363 (394)
19 4ehu_A Activator of 2-hydroxyi 99.8 1.6E-18 5.5E-23 165.2 22.5 181 169-386 69-257 (276)
20 3js6_A Uncharacterized PARM pr 99.8 1.7E-19 5.7E-24 177.3 15.5 207 144-386 114-339 (355)
21 4apw_A ALP12; actin-like prote 99.7 2.8E-19 9.6E-24 174.3 3.5 204 144-385 106-326 (329)
22 3dwl_A Actin-related protein 3 99.7 7.2E-18 2.5E-22 169.4 7.8 223 144-382 124-395 (427)
23 3qb0_A Actin-related protein 4 99.7 3.4E-16 1.2E-20 158.8 16.7 179 7-247 23-209 (498)
24 4fo0_A Actin-related protein 8 99.5 6.4E-13 2.2E-17 140.1 25.0 118 120-248 170-294 (593)
25 2d0o_A DIOL dehydratase-reacti 99.5 5.3E-15 1.8E-19 146.6 4.4 196 156-382 367-603 (610)
26 1nbw_A Glycerol dehydratase re 99.5 6.1E-15 2.1E-19 146.7 3.2 194 157-381 370-604 (607)
27 1v5n_A PDI-like hypothetical p 99.3 2.8E-13 9.6E-18 103.8 2.3 55 419-474 24-78 (89)
28 1hux_A Activator of (R)-2-hydr 99.1 4.5E-09 1.6E-13 99.0 17.1 172 173-384 76-257 (270)
29 2ews_A Pantothenate kinase; PA 98.7 1.4E-06 4.9E-11 81.8 20.4 76 301-381 207-286 (287)
30 4am6_A Actin-like protein ARP8 98.3 3.3E-06 1.1E-10 86.8 11.0 96 144-248 222-318 (655)
31 3mdq_A Exopolyphosphatase; str 97.7 0.0035 1.2E-07 59.9 20.0 77 160-241 93-170 (315)
32 2e2o_A Hexokinase; acetate and 97.7 0.041 1.4E-06 51.9 26.7 49 334-383 239-287 (299)
33 1t6c_A Exopolyphosphatase; alp 97.6 0.00028 9.6E-09 67.5 10.2 77 160-241 101-177 (315)
34 2i7n_A Pantothenate kinase 1; 97.6 0.00022 7.5E-09 68.8 9.2 47 335-381 306-358 (360)
35 2ivn_A O-sialoglycoprotein end 97.5 0.046 1.6E-06 52.5 24.3 68 314-386 229-301 (330)
36 3vgl_A Glucokinase; ROK family 97.4 0.077 2.6E-06 50.6 25.3 45 169-215 96-140 (321)
37 3r8e_A Hypothetical sugar kina 97.4 0.034 1.2E-06 53.1 22.8 47 335-381 261-317 (321)
38 2ch5_A NAGK protein; transfera 97.4 0.11 3.8E-06 49.9 27.5 82 120-208 45-132 (347)
39 4db3_A Glcnac kinase, N-acetyl 97.3 0.019 6.5E-07 55.1 19.7 46 168-215 119-164 (327)
40 3vov_A Glucokinase, hexokinase 97.2 0.022 7.7E-07 53.9 18.7 45 168-214 97-141 (302)
41 3l0q_A Xylulose kinase; xlylul 97.1 0.00087 3E-08 69.5 8.3 86 300-387 408-493 (554)
42 3cer_A Possible exopolyphospha 97.1 0.0038 1.3E-07 60.3 11.9 79 160-241 106-191 (343)
43 2qm1_A Glucokinase; alpha-beta 97.0 0.027 9.3E-07 53.8 17.4 45 169-215 108-152 (326)
44 2gup_A ROK family protein; sug 96.9 0.09 3.1E-06 49.3 20.0 49 335-383 228-287 (292)
45 2itm_A Xylulose kinase, xylulo 96.9 0.0013 4.4E-08 67.0 7.6 82 302-387 357-438 (484)
46 4htl_A Beta-glucoside kinase; 96.9 0.048 1.7E-06 51.4 18.0 49 335-383 238-291 (297)
47 4bc3_A Xylulose kinase; transf 96.9 0.0016 5.6E-08 67.1 8.1 78 307-386 407-484 (538)
48 3ll3_A Gluconate kinase; xylul 96.9 0.0015 5.2E-08 66.8 7.7 78 302-387 364-444 (504)
49 2zf5_O Glycerol kinase; hypert 96.9 0.0019 6.6E-08 65.9 8.0 80 302-387 365-444 (497)
50 3hz6_A Xylulokinase; xylulose, 96.8 0.002 6.8E-08 66.1 7.5 79 302-387 375-454 (511)
51 3eno_A Putative O-sialoglycopr 96.8 0.25 8.6E-06 47.3 21.7 70 313-387 233-307 (334)
52 3i8b_A Xylulose kinase; strain 96.8 0.0014 4.8E-08 67.2 6.1 52 334-387 424-475 (515)
53 1u6z_A Exopolyphosphatase; alp 96.8 0.0083 2.8E-07 61.3 11.7 77 160-241 100-176 (513)
54 3g25_A Glycerol kinase; IDP007 96.7 0.0021 7E-08 65.8 6.8 81 302-387 374-455 (501)
55 3ezw_A Glycerol kinase; glycer 96.6 0.0035 1.2E-07 64.5 8.1 82 301-387 371-453 (526)
56 3jvp_A Ribulokinase; PSI-II, N 96.6 0.0021 7.1E-08 66.9 6.2 77 302-386 410-490 (572)
57 4e1j_A Glycerol kinase; struct 96.6 0.0017 5.9E-08 66.7 5.3 52 334-387 425-476 (520)
58 2p3r_A Glycerol kinase; glycer 96.6 0.0022 7.5E-08 65.7 6.1 52 334-387 401-452 (510)
59 3h3n_X Glycerol kinase; ATP-bi 96.6 0.0025 8.5E-08 65.3 6.4 52 334-387 403-454 (506)
60 3ifr_A Carbohydrate kinase, FG 96.5 0.0024 8.1E-08 65.4 5.9 80 302-387 371-451 (508)
61 2dpn_A Glycerol kinase; thermu 96.5 0.0047 1.6E-07 63.0 7.9 51 334-386 398-448 (495)
62 2ap1_A Putative regulator prot 96.5 0.048 1.7E-06 52.1 14.5 44 169-214 120-163 (327)
63 1z6r_A MLC protein; transcript 96.5 0.12 4E-06 51.1 17.7 44 169-214 186-229 (406)
64 2d4w_A Glycerol kinase; alpha 96.4 0.0036 1.2E-07 64.0 6.0 81 302-387 373-454 (504)
65 3en9_A Glycoprotease, O-sialog 96.3 0.73 2.5E-05 47.2 23.2 204 142-378 72-297 (540)
66 2aa4_A Mannac kinase, putative 96.3 0.16 5.4E-06 47.5 16.7 47 335-381 234-286 (289)
67 1z05_A Transcriptional regulat 96.3 0.23 7.8E-06 49.4 18.4 44 169-214 208-251 (429)
68 2w40_A Glycerol kinase, putati 96.2 0.0045 1.5E-07 63.3 5.9 51 335-387 407-458 (503)
69 1zc6_A Probable N-acetylglucos 96.1 0.97 3.3E-05 42.4 23.8 63 310-382 228-292 (305)
70 3htv_A D-allose kinase, alloki 96.0 0.42 1.4E-05 45.2 18.3 49 334-382 239-298 (310)
71 1zbs_A Hypothetical protein PG 95.9 0.2 6.7E-06 47.0 15.0 68 310-384 212-281 (291)
72 2hoe_A N-acetylglucosamine kin 95.8 0.18 6.3E-06 49.2 15.2 48 335-382 315-370 (380)
73 2yhw_A Bifunctional UDP-N-acet 95.6 1 3.4E-05 43.1 19.5 44 169-214 131-174 (343)
74 2uyt_A Rhamnulokinase; rhamnos 95.6 0.014 4.7E-07 59.5 6.3 50 334-386 393-442 (489)
75 1sz2_A Glucokinase, glucose ki 95.3 1.1 3.7E-05 42.7 18.2 51 166-217 98-158 (332)
76 3h6e_A Carbohydrate kinase, FG 95.1 0.039 1.3E-06 55.9 7.4 72 307-384 362-436 (482)
77 3cet_A Conserved archaeal prot 94.6 0.024 8.4E-07 53.6 4.1 40 173-216 107-146 (334)
78 1faq_A RAF-1; transferase, ser 94.4 0.023 7.9E-07 38.1 2.6 40 433-473 4-43 (52)
79 4b6d_A RAC GTPase-activating p 94.3 0.017 5.7E-07 40.2 1.7 41 432-472 8-50 (61)
80 3zyy_X Iron-sulfur cluster bin 94.1 0.75 2.6E-05 47.5 14.2 58 297-355 498-555 (631)
81 1tot_A CREB-binding protein; z 94.0 0.0065 2.2E-07 40.8 -0.8 28 443-471 6-34 (52)
82 2db6_A SH3 and cysteine rich d 93.9 0.035 1.2E-06 40.4 2.9 43 431-473 16-61 (74)
83 1ptq_A Protein kinase C delta 93.9 0.016 5.6E-07 38.5 1.0 41 433-473 1-44 (50)
84 1kbe_A Kinase suppressor of RA 93.9 0.04 1.4E-06 36.3 2.8 40 433-474 5-44 (49)
85 2enz_A NPKC-theta, protein kin 93.8 0.039 1.3E-06 39.0 2.8 42 432-473 12-56 (65)
86 2eli_A Protein kinase C alpha 93.7 0.066 2.3E-06 40.0 4.1 42 432-473 17-61 (85)
87 2row_A RHO-associated protein 93.7 0.032 1.1E-06 41.5 2.3 44 429-472 21-69 (84)
88 2yuu_A NPKC-delta, protein kin 93.6 0.049 1.7E-06 40.5 3.2 43 431-473 16-61 (83)
89 2e5r_A Dystrobrevin alpha; ZZ 93.3 0.022 7.4E-07 39.9 0.8 28 444-471 12-41 (63)
90 2fnf_X Putative RAS effector N 93.3 0.046 1.6E-06 39.4 2.6 42 432-473 23-65 (72)
91 4e81_A Chaperone protein DNAK; 93.3 0.017 5.9E-07 51.8 0.4 77 395-471 1-94 (219)
92 3ven_A O-carbamoyltransferase 93.1 3.3 0.00011 42.4 16.9 80 303-387 280-361 (576)
93 2dip_A Zinc finger SWIM domain 93.0 0.022 7.6E-07 43.7 0.6 32 439-471 28-61 (98)
94 1q5l_A Chaperone protein DNAK; 93.0 0.034 1.2E-06 45.7 1.8 81 392-472 14-111 (135)
95 3bex_A Type III pantothenate k 93.0 1.1 3.8E-05 40.8 12.1 21 7-27 3-23 (249)
96 1y8f_A UNC-13 homolog A, MUNC1 92.9 0.044 1.5E-06 38.8 2.0 41 432-472 13-56 (66)
97 3uej_A NPKC-delta, protein kin 92.8 0.03 1E-06 39.5 1.0 43 431-473 8-53 (65)
98 1rfh_A RAS association (ralgds 92.0 0.029 9.9E-07 38.8 0.0 42 432-473 10-52 (59)
99 3hi0_A Putative exopolyphospha 91.7 0.4 1.4E-05 48.7 8.2 76 159-240 103-178 (508)
100 3n8e_A Stress-70 protein, mito 91.3 0.065 2.2E-06 46.4 1.5 79 393-471 18-113 (182)
101 2enn_A NPKC-theta, protein kin 91.2 0.068 2.3E-06 39.1 1.3 42 432-473 23-67 (77)
102 3epq_A Putative fructokinase; 91.0 0.99 3.4E-05 42.4 9.7 44 169-214 97-140 (302)
103 3dob_A Heat shock 70 kDa prote 91.0 0.063 2.2E-06 45.1 1.1 75 397-471 2-93 (152)
104 2yhx_A Hexokinase B; transfera 90.7 0.61 2.1E-05 46.6 8.1 55 157-215 164-220 (457)
105 2fc7_A ZZZ3 protein; structure 90.3 0.071 2.4E-06 39.5 0.7 30 444-473 22-56 (82)
106 3h0x_A 78 kDa glucose-regulate 90.3 0.079 2.7E-06 44.5 1.1 74 397-470 2-92 (152)
107 3dqg_A Heat shock 70 kDa prote 90.0 0.078 2.7E-06 44.4 0.8 74 397-470 2-92 (151)
108 3o8m_A Hexokinase; rnaseh-like 89.9 3.7 0.00013 41.1 13.0 56 156-215 185-242 (485)
109 3qbx_A Anhydro-N-acetylmuramic 89.6 0.87 3E-05 43.7 7.9 74 308-384 260-337 (371)
110 1woq_A Inorganic polyphosphate 89.1 3.5 0.00012 37.6 11.6 45 169-215 114-159 (267)
111 3ttc_A HYPF, transcriptional r 88.0 1.9 6.5E-05 44.8 9.7 66 313-383 583-651 (657)
112 3ifr_A Carbohydrate kinase, FG 87.6 0.36 1.2E-05 49.1 4.0 27 1-27 1-27 (508)
113 3cqy_A Anhydro-N-acetylmuramic 86.3 1.5 5.1E-05 42.1 7.2 73 308-384 267-343 (370)
114 4g9i_A Hydrogenase maturation 86.3 2.3 7.9E-05 45.3 9.4 63 317-384 693-760 (772)
115 2op6_A Heat shock 70 kDa prote 85.8 0.23 7.9E-06 41.6 1.1 76 397-472 2-94 (152)
116 3mcp_A Glucokinase; structural 85.0 8.7 0.0003 37.0 12.1 46 168-215 107-165 (366)
117 1u00_A HSC66, chaperone protei 83.1 0.37 1.3E-05 43.3 1.3 50 422-471 37-91 (227)
118 3vth_A Hydrogenase maturation 82.7 2.2 7.6E-05 45.3 7.2 67 315-386 679-750 (761)
119 3h6e_A Carbohydrate kinase, FG 82.4 0.68 2.3E-05 46.7 3.1 23 4-26 3-25 (482)
120 1bdg_A Hexokinase; phosphotran 81.8 3.7 0.00013 40.8 8.1 56 155-214 171-228 (451)
121 2e1z_A Propionate kinase; TDCD 81.0 27 0.00093 33.9 13.6 46 309-358 309-355 (415)
122 1cza_N Hexokinase type I; stru 80.5 7.5 0.00026 42.4 10.7 55 155-213 630-687 (917)
123 3i8b_A Xylulose kinase; strain 80.3 1.2 4E-05 45.3 4.0 23 1-25 1-23 (515)
124 3l0q_A Xylulose kinase; xlylul 80.1 1.1 3.8E-05 46.0 3.8 22 6-27 4-25 (554)
125 3hz6_A Xylulokinase; xylulose, 80.0 1.1 3.8E-05 45.5 3.7 21 6-26 4-24 (511)
126 3aap_A Ectonucleoside triphosp 78.9 2.3 8E-05 40.8 5.4 20 196-215 139-158 (353)
127 3pfq_A PKC-B, PKC-beta, protei 78.9 1.2 4E-05 47.0 3.6 42 432-473 102-146 (674)
128 3ezw_A Glycerol kinase; glycer 78.7 1.2 4E-05 45.5 3.4 22 5-26 2-23 (526)
129 3ll3_A Gluconate kinase; xylul 77.9 1.3 4.6E-05 44.8 3.5 22 6-27 3-24 (504)
130 4e1j_A Glycerol kinase; struct 77.6 1.6 5.5E-05 44.4 4.1 20 7-26 26-45 (520)
131 1iv0_A Hypothetical protein; r 77.1 1.9 6.4E-05 33.0 3.3 20 8-27 2-21 (98)
132 3h3n_X Glycerol kinase; ATP-bi 76.9 1.7 5.9E-05 44.0 4.1 22 6-27 4-25 (506)
133 3hm8_A Hexokinase-3; glucose, 76.2 45 0.0015 32.8 13.7 53 157-213 161-216 (445)
134 3cj1_A Ectonucleoside triphosp 75.6 12 0.0004 37.2 9.6 49 196-245 189-251 (456)
135 2p3r_A Glycerol kinase; glycer 75.2 1.8 6E-05 44.0 3.6 21 6-26 2-22 (510)
136 3jvp_A Ribulokinase; PSI-II, N 74.4 1.9 6.5E-05 44.4 3.6 21 6-26 4-24 (572)
137 1nu0_A Hypothetical protein YQ 74.2 3.1 0.00011 33.9 4.2 21 7-27 3-23 (138)
138 4bc3_A Xylulose kinase; transf 73.0 2.3 7.8E-05 43.5 3.8 22 6-27 9-30 (538)
139 1cza_N Hexokinase type I; stru 73.0 21 0.00073 38.8 11.6 54 157-215 184-240 (917)
140 2vrw_B P95VAV, VAV1, proto-onc 72.2 2.1 7.1E-05 42.0 3.1 42 431-472 345-389 (406)
141 2itm_A Xylulose kinase, xylulo 71.0 15 0.0005 36.8 9.2 18 9-26 2-19 (484)
142 3g25_A Glycerol kinase; IDP007 70.9 2.6 8.8E-05 42.6 3.6 20 7-26 6-25 (501)
143 2dpn_A Glycerol kinase; thermu 70.0 2.7 9.3E-05 42.4 3.5 20 7-26 2-21 (495)
144 2uyt_A Rhamnulokinase; rhamnos 69.5 2.3 8E-05 42.8 2.9 20 6-25 3-22 (489)
145 1vhx_A Putative holliday junct 69.4 2.6 9E-05 34.9 2.7 21 7-27 3-23 (150)
146 2zf5_O Glycerol kinase; hypert 69.1 3 0.0001 42.1 3.6 20 7-26 3-22 (497)
147 2w40_A Glycerol kinase, putati 68.7 2.9 9.9E-05 42.3 3.4 21 7-27 4-24 (503)
148 3f9m_A Glucokinase; hexokinase 68.5 21 0.00073 35.4 9.5 52 156-211 184-238 (470)
149 3djc_A Type III pantothenate k 68.1 3.8 0.00013 37.6 3.7 21 8-28 3-23 (266)
150 4am6_A Actin-like protein ARP8 65.3 3.1 0.00011 42.9 2.8 33 7-48 40-72 (655)
151 3ky9_A Proto-oncogene VAV; cal 65.1 3.5 0.00012 42.5 3.2 43 431-473 517-562 (587)
152 3khy_A Propionate kinase; csgi 64.9 83 0.0028 30.1 12.3 47 309-359 292-339 (384)
153 1hjr_A Holliday junction resol 62.2 7.9 0.00027 32.3 4.3 18 8-25 2-19 (158)
154 3cxl_A N-chimerin; SH2, RHO-GA 61.5 2.3 8E-05 42.5 1.0 42 431-472 208-252 (463)
155 2lq6_A Bromodomain-containing 59.9 2.5 8.6E-05 31.4 0.7 40 435-474 9-50 (87)
156 1saz_A Probable butyrate kinas 59.5 16 0.00054 35.3 6.6 48 334-381 295-346 (381)
157 2ku3_A Bromodomain-containing 58.7 3.2 0.00011 29.5 1.1 39 433-472 7-48 (71)
158 1wil_A KIAA1045 protein; ring 57.2 3.5 0.00012 30.0 1.0 28 444-471 16-43 (89)
159 2d4w_A Glycerol kinase; alpha 56.2 6.4 0.00022 39.7 3.3 20 7-26 2-21 (504)
160 3zx3_A Ectonucleoside triphosp 56.0 15 0.00051 36.4 5.7 44 172-215 150-199 (452)
161 3o8m_A Hexokinase; rnaseh-like 55.4 36 0.0012 34.0 8.4 53 196-248 79-137 (485)
162 2k16_A Transcription initiatio 54.5 5.2 0.00018 28.6 1.6 31 442-472 17-48 (75)
163 4ep4_A Crossover junction endo 53.5 12 0.0004 31.5 3.9 18 8-25 2-19 (166)
164 2lri_C Autoimmune regulator; Z 53.4 3.5 0.00012 28.9 0.5 27 444-472 13-39 (66)
165 2k0a_A PRE-mRNA-splicing facto 51.7 3.4 0.00012 31.3 0.2 22 443-464 57-79 (109)
166 1fp0_A KAP-1 corepressor; PHD 50.3 12 0.00041 27.7 3.0 27 444-472 26-52 (88)
167 3o70_A PHD finger protein 13; 50.0 9.6 0.00033 26.7 2.4 32 440-472 16-48 (68)
168 3epq_A Putative fructokinase; 49.2 29 0.00098 32.1 6.4 49 334-382 224-288 (302)
169 1nbw_A Glycerol dehydratase re 49.0 7.1 0.00024 39.5 2.1 33 145-177 132-164 (607)
170 1f62_A Transcription factor WS 48.4 4.8 0.00016 26.3 0.5 28 445-472 2-30 (51)
171 1r79_A Diacylglycerol kinase, 48.2 9.7 0.00033 28.0 2.2 42 431-472 26-71 (84)
172 3pfq_A PKC-B, PKC-beta, protei 48.1 3.8 0.00013 43.1 0.0 41 432-472 37-80 (674)
173 2xb1_A Pygopus homolog 2, B-ce 47.5 7 0.00024 30.1 1.4 30 443-472 3-35 (105)
174 1wev_A Riken cDNA 1110020M19; 46.5 9.1 0.00031 28.4 1.9 29 444-472 17-48 (88)
175 3h0g_L DNA-directed RNA polyme 45.8 12 0.00042 25.7 2.3 27 441-467 19-48 (63)
176 1xwh_A Autoimmune regulator; P 45.7 12 0.00042 25.9 2.4 27 444-472 9-35 (66)
177 3cer_A Possible exopolyphospha 45.5 1.4E+02 0.0048 28.1 10.6 69 196-281 15-85 (343)
178 2yhx_A Hexokinase B; transfera 45.4 89 0.0031 30.8 9.5 54 196-249 60-119 (457)
179 2q2r_A Glucokinase 1, putative 45.2 28 0.00097 33.2 5.8 21 6-26 28-48 (373)
180 1mm2_A MI2-beta; PHD, zinc fin 44.2 13 0.00044 25.3 2.3 27 444-472 10-36 (61)
181 1zxo_A Conserved hypothetical 43.3 11 0.00036 34.9 2.3 59 143-208 58-118 (291)
182 2h3g_X Biosynthetic protein; p 42.6 20 0.00068 32.7 4.0 20 9-28 2-21 (268)
183 2lv9_A Histone-lysine N-methyl 42.6 11 0.00038 28.5 1.9 28 444-472 29-57 (98)
184 1saz_A Probable butyrate kinas 42.5 19 0.00066 34.6 4.1 21 7-27 2-22 (381)
185 1hnj_A Beta-ketoacyl-acyl carr 41.2 30 0.001 32.0 5.2 48 308-358 211-258 (317)
186 2yql_A PHD finger protein 21A; 41.0 13 0.00044 24.8 1.8 27 444-472 10-36 (56)
187 3cet_A Conserved archaeal prot 40.2 19 0.00066 33.9 3.4 39 8-46 1-44 (334)
188 1zxo_A Conserved hypothetical 40.1 5 0.00017 37.2 -0.6 43 334-381 232-276 (291)
189 3nuw_A 2-OXO-3-deoxygalactonat 40.1 19 0.00064 33.4 3.3 44 336-382 248-291 (295)
190 1t6c_A Exopolyphosphatase; alp 38.8 1.5E+02 0.0052 27.4 9.6 38 196-233 11-49 (315)
191 3f9m_A Glucokinase; hexokinase 38.4 80 0.0027 31.3 7.8 24 196-219 76-99 (470)
192 1g99_A Acetate kinase; alpha/b 37.5 41 0.0014 32.6 5.4 46 309-358 301-347 (408)
193 3hm8_A Hexokinase-3; glucose, 37.0 1E+02 0.0036 30.2 8.3 30 196-226 58-87 (445)
194 1vd4_A Transcription initiatio 36.9 15 0.00052 24.5 1.7 27 442-468 13-50 (62)
195 1weu_A Inhibitor of growth fam 36.3 18 0.00063 26.9 2.2 28 444-472 37-67 (91)
196 1we9_A PHD finger family prote 36.1 19 0.00063 24.6 2.1 29 444-472 7-37 (64)
197 2yt5_A Metal-response element- 36.1 18 0.00061 24.9 2.0 30 444-473 7-39 (66)
198 3zyy_X Iron-sulfur cluster bin 35.0 91 0.0031 32.1 7.8 100 196-351 205-306 (631)
199 2f9w_A Pantothenate kinase; CO 34.8 29 0.001 31.7 3.7 22 7-28 23-45 (271)
200 2e6r_A Jumonji/ARID domain-con 34.5 15 0.00051 27.4 1.4 29 444-472 17-46 (92)
201 3mdq_A Exopolyphosphatase; str 34.5 1.1E+02 0.0039 28.3 7.9 30 197-226 4-33 (315)
202 2puy_A PHD finger protein 21A; 34.4 16 0.00053 24.7 1.4 27 444-472 6-32 (60)
203 2l5u_A Chromodomain-helicase-D 34.3 12 0.00042 25.4 0.9 27 444-472 12-38 (61)
204 2l43_A N-teminal domain from h 34.2 11 0.00037 27.9 0.6 29 444-472 26-57 (88)
205 2e6s_A E3 ubiquitin-protein li 33.0 21 0.00071 25.7 1.9 28 445-472 28-56 (77)
206 1ub7_A 3-oxoacyl-[acyl-carrier 32.5 41 0.0014 31.2 4.6 47 309-358 214-260 (322)
207 2jmi_A Protein YNG1, ING1 homo 32.4 23 0.00078 26.3 2.1 28 444-472 27-57 (90)
208 3t69_A Putative 2-dehydro-3-de 32.3 32 0.0011 32.4 3.6 48 336-386 260-307 (330)
209 1bdg_A Hexokinase; phosphotran 30.6 1.6E+02 0.0053 29.0 8.5 23 196-218 67-89 (451)
210 1msz_A DNA-binding protein smu 30.1 37 0.0013 24.9 2.9 28 146-173 34-61 (86)
211 3lm2_A Putative kinase; struct 29.3 25 0.00086 31.1 2.2 40 168-215 90-129 (226)
212 2ebd_A 3-oxoacyl-[acyl-carrier 29.2 50 0.0017 30.3 4.5 45 311-358 206-250 (309)
213 1wjv_A Cell growth regulating 29.0 18 0.00063 26.0 1.0 29 444-472 11-59 (79)
214 3asl_A E3 ubiquitin-protein li 28.7 22 0.00074 25.0 1.4 27 446-472 21-48 (70)
215 3lwd_A 6-phosphogluconolactona 28.4 93 0.0032 27.3 5.9 48 304-356 8-55 (226)
216 3o7a_A PHD finger protein 13 v 28.1 23 0.0008 23.0 1.4 25 448-472 8-33 (52)
217 1mzj_A Beta-ketoacylsynthase I 27.6 46 0.0016 31.2 3.9 47 309-358 225-271 (339)
218 2q2r_A Glucokinase 1, putative 27.4 35 0.0012 32.6 3.1 18 169-186 127-144 (373)
219 3ask_A E3 ubiquitin-protein li 27.4 26 0.0009 30.9 2.0 28 445-472 176-204 (226)
220 3kbq_A Protein TA0487; structu 27.3 73 0.0025 26.7 4.7 41 317-365 52-94 (172)
221 3r6m_A YEAZ, resuscitation pro 27.0 77 0.0026 27.6 5.0 62 314-377 36-103 (213)
222 1zow_A 3-oxoacyl-[acyl-carrier 25.5 53 0.0018 30.2 3.9 46 310-358 207-252 (313)
223 1wew_A DNA-binding family prot 25.5 22 0.00075 25.5 1.0 29 443-472 16-47 (78)
224 2ivn_A O-sialoglycoprotein end 25.5 95 0.0033 29.0 5.7 43 310-352 44-86 (330)
225 1bbo_A Human enhancer-binding 25.4 41 0.0014 21.3 2.3 9 457-465 29-37 (57)
226 3shb_A E3 ubiquitin-protein li 25.3 30 0.001 24.8 1.6 29 444-472 27-56 (77)
227 3eno_A Putative O-sialoglycopr 24.7 91 0.0031 29.3 5.4 45 310-354 49-93 (334)
228 2iir_A Acetate kinase; transfe 24.6 86 0.0029 30.3 5.2 47 309-359 301-348 (403)
229 2lcq_A Putative toxin VAPC6; P 24.6 24 0.00083 29.4 1.2 31 437-467 126-158 (165)
230 2x3e_A 3-oxoacyl-[acyl-carrier 24.5 47 0.0016 31.0 3.4 47 309-358 218-264 (331)
231 4dfe_A 3-oxoacyl-[acyl-carrier 24.5 96 0.0033 28.9 5.6 47 309-358 228-274 (333)
232 1wen_A Inhibitor of growth fam 23.9 39 0.0013 23.7 2.0 27 445-472 18-47 (71)
233 1woq_A Inorganic polyphosphate 23.4 50 0.0017 29.7 3.2 48 334-384 214-262 (267)
234 2gel_A Putative GRAM negative 22.9 89 0.0031 27.5 4.7 39 314-352 35-73 (231)
235 2k1p_A Zinc finger RAN-binding 22.7 51 0.0018 19.2 2.0 24 442-465 5-28 (33)
236 1u6z_A Exopolyphosphatase; alp 22.7 1.7E+02 0.0057 29.3 7.2 31 196-226 10-40 (513)
237 4ijn_A Acetate kinase, acetoki 22.6 74 0.0025 30.7 4.3 47 309-359 302-349 (398)
238 3nw0_A Non-structural maintena 22.5 21 0.00071 32.0 0.4 29 443-472 180-208 (238)
239 2g6q_A Inhibitor of growth pro 22.5 22 0.00074 24.3 0.4 27 445-472 13-42 (62)
240 1twf_L ABC10-alpha, DNA-direct 22.5 36 0.0012 23.9 1.5 28 440-467 25-55 (70)
241 2vg3_A Undecaprenyl pyrophosph 22.3 3.9E+02 0.013 24.3 8.9 59 279-347 170-239 (284)
242 2ysm_A Myeloid/lymphoid or mix 21.8 43 0.0015 25.7 2.1 29 444-472 8-37 (111)
243 3nwp_A 6-phosphogluconolactona 21.7 1.3E+02 0.0044 26.5 5.5 46 307-357 15-60 (233)
244 2vpb_A Hpygo1, pygopus homolog 21.3 24 0.00081 24.4 0.4 31 442-472 7-40 (65)
245 2vnf_A ING 4, P29ING4, inhibit 21.2 24 0.00082 23.9 0.4 27 445-472 12-41 (60)
246 1wem_A Death associated transc 21.0 24 0.00082 25.1 0.4 28 444-472 17-45 (76)
247 2qm1_A Glucokinase; alpha-beta 20.8 2.3E+02 0.0077 25.9 7.4 49 335-383 263-321 (326)
248 1kcf_A Hypothetical 30.2 KD pr 20.6 1.2E+02 0.004 27.4 5.0 32 7-48 40-71 (258)
249 1kae_A HDH, histidinol dehydro 20.4 1.8E+02 0.006 28.3 6.4 69 143-215 154-243 (434)
250 2adr_A ADR1; transcription reg 20.3 57 0.002 20.9 2.2 8 458-465 31-38 (60)
251 3ist_A Glutamate racemase; str 20.2 98 0.0034 28.0 4.5 43 334-380 178-220 (269)
252 1wee_A PHD finger family prote 20.1 50 0.0017 23.1 1.9 30 442-472 15-46 (72)
253 3lhi_A Putative 6-phosphogluco 20.1 1.4E+02 0.0047 26.3 5.3 45 307-356 12-56 (232)
No 1
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=3.2e-76 Score=616.12 Aligned_cols=463 Identities=64% Similarity=0.951 Sum_probs=413.1
Q ss_pred CCCEEEEecCCccEEEEEEECCcEEEEecCCCCcccceEEEEcCCcEEecHHHHHhhhhCCCceecccHHhhCCCCCChh
Q 041815 6 AAPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDKECFVGDAAKNQVAMNPTNTVFDAKRLIGRRFGDVS 85 (475)
Q Consensus 6 ~~~vvGIDlGTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 85 (475)
|+.+||||||||||+||++.+|.++++.|++|++++||+|+|.+++++||+.|+.+...+|+++++++||++|+.++++.
T Consensus 3 m~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 82 (554)
T 1yuw_A 3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAV 82 (554)
T ss_dssp SCCCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCSH
T ss_pred CCCEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcHH
Confidence 45799999999999999999999999999999999999999999899999999999999999999999999999999999
Q ss_pred hhhcccccCeEEEecCCCCceEEEeeCCceeeeeHHHHHHHHHHHHHHHHHhhcCCCCCeEEEEeCCCCCHHHHHHHHHH
Q 041815 86 VQSDVKLWPFEVVAGPKDKPMIVVNCKGEEKRYAAEEISSMVLAKMRDIAEDYVGSPVSNAVVTVPAYFTDSQRQATKDA 165 (475)
Q Consensus 86 v~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~vitVP~~~~~~~r~~l~~a 165 (475)
++...+.+||.++. .++.+.+.+.+.+..+.++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++|
T Consensus 83 v~~~~~~~p~~v~~-~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~A 161 (554)
T 1yuw_A 83 VQSDMKHWPFMVVN-DAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDA 161 (554)
T ss_dssp HHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEe-cCCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 99999999999884 47888888888888788999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEEEeCCeEEEEEEcCCCCCchhHHHHHHHHHH
Q 041815 166 GAMAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFDNRMVNHF 245 (475)
Q Consensus 166 ~~~agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~~~l 245 (475)
++.||++++++++||+|||++|+.+.....+..++|||+||||||++++++.++.++++++.++.++||++||+.|.+++
T Consensus 162 ~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l 241 (554)
T 1yuw_A 162 GTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVNHF 241 (554)
T ss_dssp HHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHH
T ss_pred HHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999876543478999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhcCCceeEEEEeccccCccceEEEcHHHHHHHHHHHHHHHHHHHHHHH
Q 041815 246 IQEFKRKTEKDISGSPRAVQRLRKDCERAKRILSSTSQTTIEIDSLYEGIDFSSVMTRARFEELNMDLFRKCIKHVDMCL 325 (475)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l 325 (475)
.++|.++++.++..+++.+.+|+.+||++|+.|+......+.++.+.+|.++...|+|++|+++++++++++.++++++|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i~~~i~~~L 321 (554)
T 1yuw_A 242 IAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKAL 321 (554)
T ss_dssp HHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHTTHHHHHHH
T ss_pred HHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988989999999999999999999999999999999888888899999999999999999999999999999
Q ss_pred HhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHHHHHHcCCCCCcccceEEEecccCCC
Q 041815 326 RTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGNRSDKVEDIVILDVNPNYN 405 (475)
Q Consensus 326 ~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~~~~~~~~~~~~~~d~~p~~~ 405 (475)
+++++...+++.|+|+||+|++|+|++.|++.|++.++..+.||++|||+|||++|+.++|...++++++++.|++|+++
T Consensus 322 ~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv~p~sl 401 (554)
T 1yuw_A 322 RDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSL 401 (554)
T ss_dssp HHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCCCBCSSCE
T ss_pred HHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEEEEeeeeEE
Confidence 99999888999999999999999999999999977888899999999999999999999986556688999999999997
Q ss_pred Ccccc----------cccccc-cccCC-CCCCCCCccccccceec-----cCcccccccccCCCCCCceeecccCCCCCC
Q 041815 406 SPLEL----------KTTTSF-AAQNL-PSRGGHKSHQAHDLQLK-----NHKTLSKCNGCKRPAFGLMYRCELCNFNLH 468 (475)
Q Consensus 406 ~~~~~----------~~~~~~-~~~~~-~~~~~~~~~~~h~l~~~-----~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~ 468 (475)
+.... +++.|. ..+.+ +..++|+...+|.+++. +|..++++..-++|-....-..-+..|++.
T Consensus 402 gi~~~~g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id 481 (554)
T 1yuw_A 402 GIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDID 481 (554)
T ss_dssp EEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEEC
T ss_pred EEEecCceEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCccccccCcEEEEEEEeCCCCCcccccEEEEEEEEc
Confidence 64221 111222 12223 56788888888888853 466678888877775433333344445444
Q ss_pred c
Q 041815 469 I 469 (475)
Q Consensus 469 ~ 469 (475)
.
T Consensus 482 ~ 482 (554)
T 1yuw_A 482 A 482 (554)
T ss_dssp T
T ss_pred c
Confidence 3
No 2
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=9.9e-76 Score=617.96 Aligned_cols=455 Identities=44% Similarity=0.693 Sum_probs=409.4
Q ss_pred CCEEEEecCCccEEEEEEECCcEEEEecCCCCcccceEEEEc-CCcEEecHHHHHhhhhCCCceecccHHhhCCCCCChh
Q 041815 7 APAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT-DKECFVGDAAKNQVAMNPTNTVFDAKRLIGRRFGDVS 85 (475)
Q Consensus 7 ~~vvGIDlGTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~-~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 85 (475)
..+||||||||||+||++.+|.++++.|..|++++||+|+|. ++++++|..|+.+...+|.++++++||++|++++++.
T Consensus 2 ~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 81 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (605)
T ss_dssp CCEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSHH
T ss_pred CcEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCHH
Confidence 479999999999999999999999999999999999999996 5689999999999999999999999999999999999
Q ss_pred hhhcccccCeEEEecCCCCceEEEeeCCceeeeeHHHHHHHHHHHHHHHHHhhcCCCCCeEEEEeCCCCCHHHHHHHHHH
Q 041815 86 VQSDVKLWPFEVVAGPKDKPMIVVNCKGEEKRYAAEEISSMVLAKMRDIAEDYVGSPVSNAVVTVPAYFTDSQRQATKDA 165 (475)
Q Consensus 86 v~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~vitVP~~~~~~~r~~l~~a 165 (475)
++...+.+||+++..+++...+.+ .++ .++|+++++++|++|++.++.+++..+.++|||||++|++.||+++++|
T Consensus 82 v~~~~~~~p~~~~~~~~g~~~~~~--~~~--~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~A 157 (605)
T 4b9q_A 82 VQRDVSIMPFKIIAADNGDAWVEV--KGQ--KMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDA 157 (605)
T ss_dssp HHHHHTTCSSEEEECTTSBEEEEE--TTE--EECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEEcCCCceEEEE--CCE--EECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 999999999999988888776655 454 5999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEEEeC----CeEEEEEEcCCCCCchhHHHHHH
Q 041815 166 GAMAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEK----GIFKVKATAGDTHLGGEDFDNRM 241 (475)
Q Consensus 166 ~~~agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~~~~----~~~~v~~~~~~~~~GG~~id~~l 241 (475)
++.|||+++++++||+|||++|+.+... .+..++|||+||||||+|++++.+ +.++++++.++.++||++||+.|
T Consensus 158 a~~AGl~v~~li~EP~AAAlaygl~~~~-~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l 236 (605)
T 4b9q_A 158 GRIAGLEVKRIINEPTAAALAYGLDKGT-GNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRL 236 (605)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHHHTTSCC-SSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHH
T ss_pred HHHcCCceEEEeCcHHHHHHHhhhhccC-CCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHH
Confidence 9999999999999999999999987654 378999999999999999999998 89999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhcCCceeEEEEeccccC----ccceEEEcHHHHHHHHHHHHHHH
Q 041815 242 VNHFIQEFKRKTEKDISGSPRAVQRLRKDCERAKRILSSTSQTTIEIDSLYEG----IDFSSVMTRARFEELNMDLFRKC 317 (475)
Q Consensus 242 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~~----~~~~~~itr~~~~~~~~~~~~~i 317 (475)
.+|+.++|.++.+.++..+++.+.+|+.+||++|+.||......+.++.+..+ .++.+.|||++|+++++++++++
T Consensus 237 ~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~~i 316 (605)
T 4b9q_A 237 INYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRS 316 (605)
T ss_dssp HHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHHHH
Confidence 99999999999998988999999999999999999999999999888876543 56889999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHHHHHHcCCCCCcccceEE
Q 041815 318 IKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGNRSDKVEDIVI 397 (475)
Q Consensus 318 ~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~~~~~~~~~~~~~ 397 (475)
..+++++|+++++...+|+.|+||||+||+|+|++.|++.| +.++..+.||++|||+|||++|+.++|. ++++++
T Consensus 317 ~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAai~a~~l~~~----~~~~~l 391 (605)
T 4b9q_A 317 IEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLL 391 (605)
T ss_dssp THHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHH-TSCCCSSSCTTTHHHHHHHHHHHHHHTS----SCSEEE
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHh-ccCcCCCcChhHHHHHhHHHHHHHhcCC----CCceEE
Confidence 99999999999999999999999999999999999999999 7888999999999999999999999996 589999
Q ss_pred EecccCCCCcccc----------cccccc-cccCC-CCCCCCCccccccceec-----cCcccccccccCCCCCCceeec
Q 041815 398 LDVNPNYNSPLEL----------KTTTSF-AAQNL-PSRGGHKSHQAHDLQLK-----NHKTLSKCNGCKRPAFGLMYRC 460 (475)
Q Consensus 398 ~d~~p~~~~~~~~----------~~~~~~-~~~~~-~~~~~~~~~~~h~l~~~-----~~~~~~~c~~c~~~~~~~~~~~ 460 (475)
+|++|+|+|.... +++.|. ..+.+ +..++|+...+|.++++ +|..+++|.+-++|-....-..
T Consensus 392 ~dv~p~slgie~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~ 471 (605)
T 4b9q_A 392 LDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQ 471 (605)
T ss_dssp ECBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTCCC
T ss_pred EeeeeeEEEEEEcCCEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEEEeCCCCCcCCCce
Confidence 9999999764221 222222 22333 68899998889988854 5677899999888876655555
Q ss_pred ccCCCCCCcCC
Q 041815 461 ELCNFNLHIPC 471 (475)
Q Consensus 461 ~~~~~~~~~~~ 471 (475)
.+..|++....
T Consensus 472 i~v~f~id~~g 482 (605)
T 4b9q_A 472 IEVTFDIDADG 482 (605)
T ss_dssp EEEEEEECTTS
T ss_pred EEEEEEEcCCc
Confidence 56666666543
No 3
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=2.1e-75 Score=619.70 Aligned_cols=398 Identities=32% Similarity=0.538 Sum_probs=377.4
Q ss_pred CCEEEEecCCccEEEEEEECCcEEEEecCCCCcccceEEEEcCCcEEecHHHHHhhhhCCCceecccHHhhCCCCCChhh
Q 041815 7 APAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDKECFVGDAAKNQVAMNPTNTVFDAKRLIGRRFGDVSV 86 (475)
Q Consensus 7 ~~vvGIDlGTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~v 86 (475)
+.+||||||||||+||++.+|+++++.|+.|++++||+|+|.+++++||+.|+.+...+|.++++++||++|+.++++.+
T Consensus 2 m~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v 81 (675)
T 3d2f_A 2 STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDF 81 (675)
T ss_dssp CCCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTTH
T ss_pred CcEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHHH
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccCeEEEecCCCCceEEEeeCCceeeeeHHHHHHHHHHHHHHHHHhhcCCCCCeEEEEeCCCCCHHHHHHHHHHH
Q 041815 87 QSDVKLWPFEVVAGPKDKPMIVVNCKGEEKRYAAEEISSMVLAKMRDIAEDYVGSPVSNAVVTVPAYFTDSQRQATKDAG 166 (475)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~vitVP~~~~~~~r~~l~~a~ 166 (475)
+.+.+++||+++..+++...+.+.+.|+.+.++|+++++++|++|++.|+.+++..+.++|||||++|++.||+++++|+
T Consensus 82 ~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa 161 (675)
T 3d2f_A 82 EQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAA 161 (675)
T ss_dssp HHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHH
Confidence 99999999999988888888888888877789999999999999999999999999999999999999999999999999
Q ss_pred HHcCCceeeeeechHHHHHHhhhccCC-----CCCceEEEEEeCCCceEEEEEEEeCCeEEEEEEcCCCCCchhHHHHHH
Q 041815 167 AMAGLNVLKIISEPTAAAIAYGLDRKA-----TSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFDNRM 241 (475)
Q Consensus 167 ~~agl~~~~~i~Ep~Aaa~~~~~~~~~-----~~~~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l 241 (475)
+.||++++++++||+|||++|++.+.. ..+.+++|||+||||||+|++++.++.++++++.++.++||++||+.|
T Consensus 162 ~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l 241 (675)
T 3d2f_A 162 RIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAI 241 (675)
T ss_dssp HHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred HHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHH
Confidence 999999999999999999999886531 237899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhcCCceeEEEEeccccCccceEEEcHHHHHHHHHHHHHHHHHHH
Q 041815 242 VNHFIQEFKRKTEKDISGSPRAVQRLRKDCERAKRILSSTSQTTIEIDSLYEGIDFSSVMTRARFEELNMDLFRKCIKHV 321 (475)
Q Consensus 242 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i 321 (475)
++++..+|.++++.++..+++++.+|+.+||++|+.||......+.++.+.++.++.+.|||++|+++++++++++..++
T Consensus 242 ~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~i 321 (675)
T 3d2f_A 242 TEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPV 321 (675)
T ss_dssp HHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHHH
T ss_pred HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888899999999999999999999998899999988888889999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHHHHHHcCCCCCcccceEEEecc
Q 041815 322 DMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGNRSDKVEDIVILDVN 401 (475)
Q Consensus 322 ~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~~~~~~~~~~~~~~d~~ 401 (475)
+++|++++++..+|+.|+|+||+||+|+|++.|++.| +.++..+.||++|||+|||++|+.+++. +++++++++|++
T Consensus 322 ~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAa~~a~~ls~~--~~v~~~~l~Dv~ 398 (675)
T 3d2f_A 322 TKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAF-GKPLSTTLNQDEAIAKGAAFICAIHSPT--LRVRPFKFEDIH 398 (675)
T ss_dssp HHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHH-TSCEECCSCTTTHHHHHHHHHHHHTCSS--CCCCCCEEEEEE
T ss_pred HHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhc-CCCccccCCcchHHHHHHHHHHHHhCCC--CcccceEEEeee
Confidence 9999999998889999999999999999999999999 6788899999999999999999999984 568999999999
Q ss_pred cCCCCc
Q 041815 402 PNYNSP 407 (475)
Q Consensus 402 p~~~~~ 407 (475)
|+|++.
T Consensus 399 p~slgi 404 (675)
T 3d2f_A 399 PYSVSY 404 (675)
T ss_dssp CSCEEE
T ss_pred ecceEe
Confidence 999874
No 4
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=1.9e-74 Score=608.21 Aligned_cols=454 Identities=44% Similarity=0.698 Sum_probs=400.4
Q ss_pred CCEEEEecCCccEEEEEEECCcEEEEecCCCCcccceEEEEc-CCcEEecHHHHHhhhhCCCceecccHHhhCCCCCChh
Q 041815 7 APAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT-DKECFVGDAAKNQVAMNPTNTVFDAKRLIGRRFGDVS 85 (475)
Q Consensus 7 ~~vvGIDlGTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~-~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 85 (475)
..+||||||||||+||++.+|.++++.|++|++++||+|+|. +++++||+.|+.+...+|+++++++||++|+.++++.
T Consensus 2 ~~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~ 81 (605)
T 2kho_A 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (605)
T ss_dssp --CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTT
T ss_pred CCEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHH
Confidence 368999999999999999999999999999999999999994 5789999999999999999999999999999999999
Q ss_pred hhhcccccCeEEEecCCCCceEEEeeCCceeeeeHHHHHHHHHHHHHHHHHhhcCCCCCeEEEEeCCCCCHHHHHHHHHH
Q 041815 86 VQSDVKLWPFEVVAGPKDKPMIVVNCKGEEKRYAAEEISSMVLAKMRDIAEDYVGSPVSNAVVTVPAYFTDSQRQATKDA 165 (475)
Q Consensus 86 v~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~vitVP~~~~~~~r~~l~~a 165 (475)
++...+.+||+++.+.++.+.+.+ +|+ .++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++|
T Consensus 82 v~~~~~~~p~~~~~~~~g~~~i~~--~g~--~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A 157 (605)
T 2kho_A 82 VQRDVSIMPFKIIAADNGDAWVEV--KGQ--KMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDA 157 (605)
T ss_dssp HHHHHHHCSSCEEECTTSBEEEEE--TTE--EECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEECCCCceEEEE--CCE--EEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHH
Confidence 998888999999888888777766 553 5899999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEEEe----CCeEEEEEEcCCCCCchhHHHHHH
Q 041815 166 GAMAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIE----KGIFKVKATAGDTHLGGEDFDNRM 241 (475)
Q Consensus 166 ~~~agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~~~----~~~~~v~~~~~~~~~GG~~id~~l 241 (475)
++.||++++++++||+|||++|+.+... .+..++|||+||||||+|++++. ++.++++++.++.++||++||+.|
T Consensus 158 ~~~AGl~v~~li~EP~AAAlay~l~~~~-~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l 236 (605)
T 2kho_A 158 GRIAGLEVKRIINEPTAAALAYGLDKGT-GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRL 236 (605)
T ss_dssp HHTTTCEEEEEEEHHHHHHHHTTTTSSS-SEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHH
T ss_pred HHHcCCceEEEecCHHHHHHHhhhcccC-CCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHHH
Confidence 9999999999999999999999987652 37899999999999999999998 789999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhcCCceeEEEEeccccC----ccceEEEcHHHHHHHHHHHHHHH
Q 041815 242 VNHFIQEFKRKTEKDISGSPRAVQRLRKDCERAKRILSSTSQTTIEIDSLYEG----IDFSSVMTRARFEELNMDLFRKC 317 (475)
Q Consensus 242 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~~----~~~~~~itr~~~~~~~~~~~~~i 317 (475)
++++.++|+++++.++..+++.+.+|+.+||++|+.||......+.++.+.++ .++.+.|||++|+++++|+++++
T Consensus 237 ~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i 316 (605)
T 2kho_A 237 INYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRS 316 (605)
T ss_dssp HHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTGGG
T ss_pred HHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHHHH
Confidence 99999999999998899999999999999999999999999888988876653 45678999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHHHHHHcCCCCCcccceEE
Q 041815 318 IKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGNRSDKVEDIVI 397 (475)
Q Consensus 318 ~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~~~~~~~~~~~~~ 397 (475)
.++++++|+++++...+|+.|+||||+|++|+|++.|++.| +.++..+.||++|||+|||++|+.++|. ++++++
T Consensus 317 ~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f-g~~~~~~~npd~aVA~GAa~~a~~l~~~----~~~~~l 391 (605)
T 2kho_A 317 IEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLL 391 (605)
T ss_dssp TSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHHTTTTTS----CCCCCC
T ss_pred HHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhc-CCCcCcCCCcchHHHHHHHHHHHHhcCC----ccCceE
Confidence 99999999999999899999999999999999999999999 7788899999999999999999999985 688999
Q ss_pred EecccCCCCccc----------ccccccc-cccCC-CCCCCCCccccccceec-----cCcccccccccCCCCCCceeec
Q 041815 398 LDVNPNYNSPLE----------LKTTTSF-AAQNL-PSRGGHKSHQAHDLQLK-----NHKTLSKCNGCKRPAFGLMYRC 460 (475)
Q Consensus 398 ~d~~p~~~~~~~----------~~~~~~~-~~~~~-~~~~~~~~~~~h~l~~~-----~~~~~~~c~~c~~~~~~~~~~~ 460 (475)
+|++|++++... -+++.|. ..+.+ +..++|+...+|.+++. +|..++++.+-++|-....-..
T Consensus 392 ~dv~p~slgi~~~~g~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~ 471 (605)
T 2kho_A 392 LDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQ 471 (605)
T ss_dssp SBCCCCCEEEEETTTEEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCSCCTTCSC
T ss_pred EeeeeeeccccccCCceEEEEecccccCccceEEEEecCCCceEEEEEEEeccCcccccCcEEeEEEecCCCCCCCCCcE
Confidence 999999976321 1222222 12223 67888988888888854 4667788888777754444344
Q ss_pred ccCCCCCCcC
Q 041815 461 ELCNFNLHIP 470 (475)
Q Consensus 461 ~~~~~~~~~~ 470 (475)
.+..|++...
T Consensus 472 i~v~f~id~~ 481 (605)
T 2kho_A 472 IEVTFDIDAD 481 (605)
T ss_dssp EEEEEEECTT
T ss_pred EEEEEEEcCC
Confidence 4555655544
No 5
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=2.6e-68 Score=539.12 Aligned_cols=380 Identities=72% Similarity=1.110 Sum_probs=361.9
Q ss_pred CCCEEEEecCCccEEEEEEECCcEEEEecCCCCcccceEEEEcCCcEEecHHHHHhhhhCCCceecccHHhhCCCCCChh
Q 041815 6 AAPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDKECFVGDAAKNQVAMNPTNTVFDAKRLIGRRFGDVS 85 (475)
Q Consensus 6 ~~~vvGIDlGTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 85 (475)
.+.+||||||||||+||++.+|.++++.++.|++++||+|+|.+++++||..|+.+...+|.++++++|+++|++++++.
T Consensus 22 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~~ 101 (404)
T 3i33_A 22 SMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDAT 101 (404)
T ss_dssp -CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTSHH
T ss_pred cCCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCcHH
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccccCeEEEecCCCCceEEEeeCCceeeeeHHHHHHHHHHHHHHHHHhhcCCCCCeEEEEeCCCCCHHHHHHHHHH
Q 041815 86 VQSDVKLWPFEVVAGPKDKPMIVVNCKGEEKRYAAEEISSMVLAKMRDIAEDYVGSPVSNAVVTVPAYFTDSQRQATKDA 165 (475)
Q Consensus 86 v~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~vitVP~~~~~~~r~~l~~a 165 (475)
+++..+.+||.+.. .++.+.+.+.+.++...++++++++++|++|++.++.+++..+.++|||||++|++.||+++++|
T Consensus 102 ~~~~~~~~p~~~~~-~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a 180 (404)
T 3i33_A 102 VQSDMKHWPFRVVS-EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDA 180 (404)
T ss_dssp HHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHhhCCceEEc-cCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHHH
Confidence 99999999999885 67888999999887788999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceeeeeechHHHHHHhhhccCCC--CCceEEEEEeCCCceEEEEEEEeCCeEEEEEEcCCCCCchhHHHHHHHH
Q 041815 166 GAMAGLNVLKIISEPTAAAIAYGLDRKAT--SEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFDNRMVN 243 (475)
Q Consensus 166 ~~~agl~~~~~i~Ep~Aaa~~~~~~~~~~--~~~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~~ 243 (475)
++.||++++.+++||+|||++|+...... .+..++|||+||||||++++++.++.+++++..++..+||++||+.|.+
T Consensus 181 ~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~ 260 (404)
T 3i33_A 181 GTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 260 (404)
T ss_dssp HHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHH
T ss_pred HHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999877632 4789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhcCCceeEEEEeccccCccceEEEcHHHHHHHHHHHHHHHHHHHHH
Q 041815 244 HFIQEFKRKTEKDISGSPRAVQRLRKDCERAKRILSSTSQTTIEIDSLYEGIDFSSVMTRARFEELNMDLFRKCIKHVDM 323 (475)
Q Consensus 244 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~ 323 (475)
++.++|.++++.++..+++.+.+|+.+||++|+.|+......+.++.+.++.++.+.++|++|+++++++++++.+.+++
T Consensus 261 ~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i~~ 340 (404)
T 3i33_A 261 HLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEK 340 (404)
T ss_dssp HHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHH
T ss_pred HHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998888989999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHHHHHHcC
Q 041815 324 CLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSG 386 (475)
Q Consensus 324 ~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~~ 386 (475)
+|+++++...+++.|+|+||+|++|+|++.|++.|++.++..+.||++|||+|||++|++++|
T Consensus 341 ~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 341 ALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 999999888899999999999999999999999998888999999999999999999999987
No 6
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=6.6e-68 Score=549.17 Aligned_cols=428 Identities=43% Similarity=0.702 Sum_probs=371.7
Q ss_pred CCEEEEecCCccEEEEEEECCcEEEEecCCCCcccceEEEEcCCcEEecHHHHHhhhhCCCceecccHHhhCCCCCChhh
Q 041815 7 APAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDKECFVGDAAKNQVAMNPTNTVFDAKRLIGRRFGDVSV 86 (475)
Q Consensus 7 ~~vvGIDlGTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~v 86 (475)
..+||||||||||++|++.+|.++++.|++|++++||+|+|.+++++||++|+.+...+| ++++++|+++|+.+.
T Consensus 2 ~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~---- 76 (509)
T 2v7y_A 2 SKIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK---- 76 (509)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEESSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC----
T ss_pred CCEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEECCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE----
Confidence 369999999999999999999999999999999999999998889999999999999999 999999999997321
Q ss_pred hhcccccCeEEEecCCCCceEEEeeCCceeeeeHHHHHHHHHHHHHHHHHhhcCCCCCeEEEEeCCCCCHHHHHHHHHHH
Q 041815 87 QSDVKLWPFEVVAGPKDKPMIVVNCKGEEKRYAAEEISSMVLAKMRDIAEDYVGSPVSNAVVTVPAYFTDSQRQATKDAG 166 (475)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~vitVP~~~~~~~r~~l~~a~ 166 (475)
+ ..+|. .++++++++++|++|++.++.+++.++.++|||||++|++.||+++++|+
T Consensus 77 ----------~------------~~~g~--~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~ 132 (509)
T 2v7y_A 77 ----------V------------EIEGK--QYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAG 132 (509)
T ss_dssp ----------E------------EETTE--EECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred ----------E------------EECCE--EEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 1 12343 48999999999999999999999999999999999999999999999999
Q ss_pred HHcCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEEEeCCeEEEEEEcCCCCCchhHHHHHHHHHHH
Q 041815 167 AMAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFDNRMVNHFI 246 (475)
Q Consensus 167 ~~agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~~~l~ 246 (475)
+.||++++++++||+|||++|+.+... +.+++|||+||||||++++++.++.++++++.++.++||++||+.|.+++.
T Consensus 133 ~~AGl~~~~li~Ep~AAAlay~~~~~~--~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~ 210 (509)
T 2v7y_A 133 RIAGLEVERIINEPTAAALAYGLDKEE--DQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLV 210 (509)
T ss_dssp HHTTCEEEEEEEHHHHHHHHTTGGGSC--SEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred HHcCCCeEEEecCHHHHHHHHhhccCC--CCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHH
Confidence 999999999999999999999987653 789999999999999999999999999999999899999999999999999
Q ss_pred HHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhcCCceeEEEEecccc---C-ccceEEEcHHHHHHHHHHHHHHHHHHHH
Q 041815 247 QEFKRKTEKDISGSPRAVQRLRKDCERAKRILSSTSQTTIEIDSLYE---G-IDFSSVMTRARFEELNMDLFRKCIKHVD 322 (475)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~---~-~~~~~~itr~~~~~~~~~~~~~i~~~i~ 322 (475)
++|+++++.++..+++.+.+|+.+||++|+.|+......+.++.+.+ | .++.+.|||++|+++++|+++++.++++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~ 290 (509)
T 2v7y_A 211 NQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVR 290 (509)
T ss_dssp HHHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHHHH
T ss_pred HHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888888999999999999999999999888888887654 2 3567899999999999999999999999
Q ss_pred HHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHHHHHHcCCCCCcccceEEEeccc
Q 041815 323 MCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGNRSDKVEDIVILDVNP 402 (475)
Q Consensus 323 ~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~~~~~~~~~~~~~~d~~p 402 (475)
++|+++++...+++.|+|+||+|++|+|++.|++.| +.++..+.||++|||+||+++|+.++|. ++++++.|++|
T Consensus 291 ~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f-~~~~~~~~~p~~aVa~Gaa~~a~~l~~~----~~~~~~~dv~p 365 (509)
T 2v7y_A 291 QALQDAGLTPADIDKVILVGGSTRIPAVQEAIKREL-GKEPHKGVNPDEVVAIGAAIQGGVIAGE----VKDVVLLDVTP 365 (509)
T ss_dssp HHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHH-SSCCBCCSCTTTHHHHHHHHHHHHHHTC----CCCCCCCCBCS
T ss_pred HHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHh-CCCcCcCCCchhhhHhhHHHHHHHhcCC----ccCceEEEeec
Confidence 999999988889999999999999999999999999 6788889999999999999999999985 57899999999
Q ss_pred CCCCccc----------ccccccc-cccCC-CCCCCCCccccccceec-----cCcccccccccCCCCCCceeecccCCC
Q 041815 403 NYNSPLE----------LKTTTSF-AAQNL-PSRGGHKSHQAHDLQLK-----NHKTLSKCNGCKRPAFGLMYRCELCNF 465 (475)
Q Consensus 403 ~~~~~~~----------~~~~~~~-~~~~~-~~~~~~~~~~~h~l~~~-----~~~~~~~c~~c~~~~~~~~~~~~~~~~ 465 (475)
++++... -+++.|. ..+.+ +..++|+...+|.++.. +|..++++..-++|-....-..-+..|
T Consensus 366 ~slgi~~~~~~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~f 445 (509)
T 2v7y_A 366 LSLGIETMGGVFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIEVTF 445 (509)
T ss_dssp SEEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEESSSBGGGSEEEEEEEEECCCCCCTTCSCEEEEE
T ss_pred cccceeecCCceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEecCccccccCcEEEEEEEeCCCCCCCcccEEEEEE
Confidence 9976321 1122222 12223 57788888888888854 455667777777764433333344555
Q ss_pred CCCcC
Q 041815 466 NLHIP 470 (475)
Q Consensus 466 ~~~~~ 470 (475)
++...
T Consensus 446 ~id~~ 450 (509)
T 2v7y_A 446 DIDAN 450 (509)
T ss_dssp EECTT
T ss_pred EEcCC
Confidence 55444
No 7
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=5.1e-67 Score=528.08 Aligned_cols=377 Identities=62% Similarity=0.992 Sum_probs=360.7
Q ss_pred CCEEEEecCCccEEEEEEECCcEEEEecCCCCcccceEEEEcCCcEEecHHHHHhhhhCCCceecccHHhhCCCCCChhh
Q 041815 7 APAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDKECFVGDAAKNQVAMNPTNTVFDAKRLIGRRFGDVSV 86 (475)
Q Consensus 7 ~~vvGIDlGTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~v 86 (475)
..+||||||||||++|++.+|.++++.++.|++++||+|+|.++++++|+.|+.+...+|.++++++|+++|++++++.+
T Consensus 18 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 97 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSV 97 (394)
T ss_dssp CSCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCHHH
T ss_pred CCEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccCeEEEecCCCCceEEEeeCCceeeeeHHHHHHHHHHHHHHHHHhhcCCCCCeEEEEeCCCCCHHHHHHHHHHH
Q 041815 87 QSDVKLWPFEVVAGPKDKPMIVVNCKGEEKRYAAEEISSMVLAKMRDIAEDYVGSPVSNAVVTVPAYFTDSQRQATKDAG 166 (475)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~vitVP~~~~~~~r~~l~~a~ 166 (475)
+...+.+||.+. +.++.+.+.+.+.++...++++++++++|++|++.++.+++..+.++|||||++|++.+|+++++|+
T Consensus 98 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~ 176 (394)
T 3qfu_A 98 QKDIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAG 176 (394)
T ss_dssp HHHHTTCSSEEE-EETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEE-cCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHHH
Confidence 999999999988 7788899999888888889999999999999999999999999999999999999999999999999
Q ss_pred HHcCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEEEeCCeEEEEEEcCCCCCchhHHHHHHHHHHH
Q 041815 167 AMAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFDNRMVNHFI 246 (475)
Q Consensus 167 ~~agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~~~l~ 246 (475)
+.||++.+++++||+|||++|+..... .+..++|||+||||||++++++.++.+++++..++..+||++||+.|.+++.
T Consensus 177 ~~aGl~~~~li~Ep~Aaa~~~~~~~~~-~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~ 255 (394)
T 3qfu_A 177 TIAGLNVLRIVNEPTAAAIAYGLDKSD-KEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLI 255 (394)
T ss_dssp HHTTCEEEEEEEHHHHHHHHTTTTSCS-SCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred HHcCCceEEEecCHHHHHHHHhhccCC-CCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHHHH
Confidence 999999999999999999999876643 3789999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhcCCceeEEEEeccccCccceEEEcHHHHHHHHHHHHHHHHHHHHHHHH
Q 041815 247 QEFKRKTEKDISGSPRAVQRLRKDCERAKRILSSTSQTTIEIDSLYEGIDFSSVMTRARFEELNMDLFRKCIKHVDMCLR 326 (475)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~ 326 (475)
++|.++++.++..+++.+.+|+.+||++|+.|+......+.++.+.++.++.+.++|++|+++++++++++.+.+.++|+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l~ 335 (394)
T 3qfu_A 256 KAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQ 335 (394)
T ss_dssp HHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998888888999999999999999999999999999999
Q ss_pred hCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHHHHHHc
Q 041815 327 TGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLS 385 (475)
Q Consensus 327 ~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~ 385 (475)
+++....+++.|+|+||+|++|+|++.|++.|++.++..+.||++|||+|||++|++++
T Consensus 336 ~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 336 DSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 99988888999999999999999999999999888899999999999999999999875
No 8
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=2.9e-65 Score=517.31 Aligned_cols=378 Identities=31% Similarity=0.542 Sum_probs=342.1
Q ss_pred CCCEEEEecCCccEEEEEEECCcEEEEecCCCCcccceEEEEcCCcEEecHHHHHhhhhCCCceecccHHhhCCCCCChh
Q 041815 6 AAPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDKECFVGDAAKNQVAMNPTNTVFDAKRLIGRRFGDVS 85 (475)
Q Consensus 6 ~~~vvGIDlGTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 85 (475)
.+.+||||||||||++|++.+|.++++.++.|.+++||+|+|.+++++||..|..+...+|.++++++|+++|++++++.
T Consensus 12 ~~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~ 91 (409)
T 4gni_A 12 ERVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVD 91 (409)
T ss_dssp -CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEETTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCC
T ss_pred CCcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECCCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchh
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999988776
Q ss_pred hhhcccccCeEEEecCCCCceEEEeeC----CceeeeeHHHHHHHHHHHHHHHHHhhcCCCCCeEEEEeCCCCCHHHHHH
Q 041815 86 VQSDVKLWPFEVVAGPKDKPMIVVNCK----GEEKRYAAEEISSMVLAKMRDIAEDYVGSPVSNAVVTVPAYFTDSQRQA 161 (475)
Q Consensus 86 v~~~~~~~~~~~~~~~~~~~~~~v~~~----g~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~vitVP~~~~~~~r~~ 161 (475)
+.... +++.+. +.++...+.+... +....++++++++++|++|++.++.+++..+.++|+|||++|++.||++
T Consensus 92 ~~~~~--~~~~~~-~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~ 168 (409)
T 4gni_A 92 PTHNH--ASAHPQ-EAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAA 168 (409)
T ss_dssp CGGGT--TSCCCE-EETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHH
T ss_pred hhhhc--ccccee-cCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHH
Confidence 55443 333333 3456666666554 3556799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCceeeeeechHHHHHHhhhcc-CCCCCceEEEEEeCCCceEEEEEEEeCCeEEEEEEcCCCCCchhHHHHH
Q 041815 162 TKDAGAMAGLNVLKIISEPTAAAIAYGLDR-KATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFDNR 240 (475)
Q Consensus 162 l~~a~~~agl~~~~~i~Ep~Aaa~~~~~~~-~~~~~~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~ 240 (475)
+++|++.||++++.+++||+|||++|+... ....+..++|||+||||||++++++.++.++++++.++..+||++||+.
T Consensus 169 ~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~ 248 (409)
T 4gni_A 169 LIAAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKV 248 (409)
T ss_dssp HHHHHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHH
T ss_pred HHHHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHH
Confidence 999999999999999999999999998875 2234889999999999999999999999999999998899999999999
Q ss_pred HHHHHHHHHHhhcc--CCCCCCHHHHHHHHHHHHHHHHHhcCCceeEEEEeccccCccceEEEcHHHHHHHHHHHHHHHH
Q 041815 241 MVNHFIQEFKRKTE--KDISGSPRAVQRLRKDCERAKRILSSTSQTTIEIDSLYEGIDFSSVMTRARFEELNMDLFRKCI 318 (475)
Q Consensus 241 l~~~l~~~~~~~~~--~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~ 318 (475)
|.+++.++|.++++ .+...+++.+.+|+.+||++|+.|+......+.++.+.++.++...|||++|+++++++++++.
T Consensus 249 i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~ 328 (409)
T 4gni_A 249 LIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYETIARTVFEGFN 328 (409)
T ss_dssp HHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEEeeHHHHHHHHHHHHHHHH
Confidence 99999999998888 7788899999999999999999999999999999998899999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCc-cc------ccCCCCcchhhchHHHHHHHHcC
Q 041815 319 KHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGK-RL------CKNINPDEAVAYGAAVQAAVLSG 386 (475)
Q Consensus 319 ~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~-~v------~~~~~p~~ava~Gaa~~a~~~~~ 386 (475)
++++++|+++++...+++.|+|+||+|++|+|++.|++.|+.. ++ ....||++|||+|||++|+....
T Consensus 329 ~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~ 403 (409)
T 4gni_A 329 RLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQE 403 (409)
T ss_dssp HHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhhh
Confidence 9999999999998889999999999999999999999999543 34 57789999999999999998754
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=4e-64 Score=504.87 Aligned_cols=373 Identities=50% Similarity=0.816 Sum_probs=341.2
Q ss_pred CCEEEEecCCccEEEEEEECCcEEEEecCCCCcccceEEEEc-CCcEEecHHHHHhhhhCCCceecccHHhhCCCCCChh
Q 041815 7 APAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT-DKECFVGDAAKNQVAMNPTNTVFDAKRLIGRRFGDVS 85 (475)
Q Consensus 7 ~~vvGIDlGTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~-~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 85 (475)
..+||||||||||++|++.+|.++++.+++|.+++||+|+|. +++++||+.|+.+...+|+++++++|+++|+.++++.
T Consensus 2 ~~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 81 (383)
T 1dkg_D 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (383)
T ss_dssp -CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHH
T ss_pred CcEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHH
Confidence 368999999999999999999999999999999999999995 4778999999999999999999999999999999988
Q ss_pred hhhcccccCeEEEecCCCCceEEEeeCCceeeeeHHHHHHHHHHHHHHHHHhhcCCCCCeEEEEeCCCCCHHHHHHHHHH
Q 041815 86 VQSDVKLWPFEVVAGPKDKPMIVVNCKGEEKRYAAEEISSMVLAKMRDIAEDYVGSPVSNAVVTVPAYFTDSQRQATKDA 165 (475)
Q Consensus 86 v~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~vitVP~~~~~~~r~~l~~a 165 (475)
++...+.+||.++.+.++...+.+ +|+ .++++++++++|+++++.++.+++.++.++|+|||++|++.||+++++|
T Consensus 82 ~~~~~~~~p~~~~~~~~~~~~~~~--~g~--~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a 157 (383)
T 1dkg_D 82 VQRDVSIMPFKIIAADNGDAWVEV--KGQ--KMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDA 157 (383)
T ss_dssp HHHHTTTCSSEEEECSSSBEEEEE--TTE--EECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEEcCCCcEEEEE--CCE--EEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 988888999998878887776665 454 5899999999999999999999998889999999999999999999999
Q ss_pred HHHcCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEEEe----CCeEEEEEEcCCCCCchhHHHHHH
Q 041815 166 GAMAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIE----KGIFKVKATAGDTHLGGEDFDNRM 241 (475)
Q Consensus 166 ~~~agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~~~----~~~~~v~~~~~~~~~GG~~id~~l 241 (475)
++.||++.+.+++||+|||++|+.+... .+..++|||+||||||+++++.. ++.++++++.++..+||++||+.|
T Consensus 158 ~~~aGl~~~~li~Ep~Aaa~~~~~~~~~-~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l 236 (383)
T 1dkg_D 158 GRIAGLEVKRIINEPTAAALAYGLDKGT-GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRL 236 (383)
T ss_dssp HHHTTCEESCCCBHHHHHHHHHTCCC-C-CEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHH
T ss_pred HHHcCCceEEEeccHHHHHHHHHhccCC-CCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHHH
Confidence 9999999999999999999999886542 37899999999999999999998 678899988888899999999999
Q ss_pred HHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhcCCceeEEEEecccc---C-ccceEEEcHHHHHHHHHHHHHHH
Q 041815 242 VNHFIQEFKRKTEKDISGSPRAVQRLRKDCERAKRILSSTSQTTIEIDSLYE---G-IDFSSVMTRARFEELNMDLFRKC 317 (475)
Q Consensus 242 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~---~-~~~~~~itr~~~~~~~~~~~~~i 317 (475)
.+++.++|.++++.++..+++.+.+|+++||++|+.|+......+.++.+.+ | .++.+.|+|++|+++++|+++++
T Consensus 237 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~i 316 (383)
T 1dkg_D 237 INYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRS 316 (383)
T ss_dssp HHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHHHH
Confidence 9999999998888888888999999999999999999998888888876553 2 44567999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHHHHHHc
Q 041815 318 IKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLS 385 (475)
Q Consensus 318 ~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~ 385 (475)
.+.++++|+++++...+++.|+|+||+|++|+|++.|++.| +.++..+.||++|||+||+++|++|+
T Consensus 317 ~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 317 IELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHh-CCCCCCCcChHHHHHHHHHHHHHhhC
Confidence 99999999999988889999999999999999999999999 67888899999999999999998764
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=4.7e-44 Score=353.65 Aligned_cols=310 Identities=24% Similarity=0.340 Sum_probs=242.5
Q ss_pred CCEEEEecCCccEEEEEEECCcEEEEecCCCCcccceEEEEcCC--c-EEecHHHHHhhhhCCCceecccHHhhCCCCCC
Q 041815 7 APAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDK--E-CFVGDAAKNQVAMNPTNTVFDAKRLIGRRFGD 83 (475)
Q Consensus 7 ~~vvGIDlGTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~~~--~-~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~ 83 (475)
+.+|||||||+||++++..++ .++ .+||+|+|.++ + .++|++|+.....+|.++...
T Consensus 3 ~~~igIDlGT~~s~v~~~~~~--~~~-------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~~----------- 62 (344)
T 1jce_A 3 RKDIGIDLGTANTLVFLRGKG--IVV-------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKAI----------- 62 (344)
T ss_dssp -CEEEEEECSSEEEEEETTTE--EEE-------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEEE-----------
T ss_pred CceEEEEcCcCcEEEEECCCC--EEE-------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEEE-----------
Confidence 478999999999999975333 232 27999999754 3 479999998887777776421
Q ss_pred hhhhhcccccCeEEEecCCCCceEEEeeCCceeee-eHHHHHHHHHHHHHHHHHhhcCCCCCeEEEEeCCCCCHHHHHHH
Q 041815 84 VSVQSDVKLWPFEVVAGPKDKPMIVVNCKGEEKRY-AAEEISSMVLAKMRDIAEDYVGSPVSNAVVTVPAYFTDSQRQAT 162 (475)
Q Consensus 84 ~~v~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~-~~~~l~~~~L~~l~~~a~~~~~~~~~~~vitVP~~~~~~~r~~l 162 (475)
+|++ + |....+ .+++++++++++++.. ..++ ...+|+|||++|++.||+++
T Consensus 63 ---------~p~~-----~----------g~i~~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~ 114 (344)
T 1jce_A 63 ---------RPMR-----D----------GVIADYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAI 114 (344)
T ss_dssp ---------CCEE-----T----------TEESSHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHH
T ss_pred ---------ecCC-----C----------CeeCChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHH
Confidence 1111 0 111112 4677777777776542 1233 36899999999999999999
Q ss_pred HHHHHHcCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEEEeCCeEEEEEEcCCCCCchhHHHHHHH
Q 041815 163 KDAGAMAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFDNRMV 242 (475)
Q Consensus 163 ~~a~~~agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~ 242 (475)
++|++.||++.+.+++||+|||++|+.+... +..++|||+||||||+++++.+. ....++..+||++||+.|.
T Consensus 115 ~~a~~~aG~~~~~li~ep~Aaa~~~~~~~~~--~~~~lVvDiGggttdvsv~~~~~-----~~~~~~~~lGG~~id~~l~ 187 (344)
T 1jce_A 115 LDAGLEAGASKVFLIEEPMAAAIGSNLNVEE--PSGNMVVDIGGGTTEVAVISLGS-----IVTWESIRIAGDEMDEAIV 187 (344)
T ss_dssp HHHHHHTTCSEEEEEEHHHHHHHHTTCCTTS--SSCEEEEEECSSCEEEEEEETTE-----EEEEEEESCSHHHHHHHHH
T ss_pred HHHHHHcCCCeEeccCCHHHHHHhcCCCCCC--CceEEEEEeCCCeEEEEEEEcCC-----EEeeCCCCccChhHHHHHH
Confidence 9999999999999999999999999876543 77899999999999999998754 2234567999999999999
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhcCCce------eEEEEe--ccccCccceEEEcHHHHHHHHHHHH
Q 041815 243 NHFIQEFKRKTEKDISGSPRAVQRLRKDCERAKRILSSTSQ------TTIEID--SLYEGIDFSSVMTRARFEELNMDLF 314 (475)
Q Consensus 243 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~------~~~~i~--~~~~~~~~~~~itr~~~~~~~~~~~ 314 (475)
+++.+++... + + ...||++|+.++.... ..+.++ .+.+|.+..+.|+|++|+++++|.+
T Consensus 188 ~~l~~~~~~~----~--~-------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~ 254 (344)
T 1jce_A 188 QYVRETYRVA----I--G-------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRSVV 254 (344)
T ss_dssp HHHHHHHCEE----C--C-------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHHHHHHHTHHHH
T ss_pred HHHHHHhCcc----c--C-------HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHHHHHHHHHHHH
Confidence 9998776421 1 1 3579999999987642 244443 3445666788999999999999999
Q ss_pred HHHHHHHHHHHHhCCCC--CCCC-CeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHHHHHHc
Q 041815 315 RKCIKHVDMCLRTGKTD--NSSV-DDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLS 385 (475)
Q Consensus 315 ~~i~~~i~~~l~~~~~~--~~~i-~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~ 385 (475)
+++.+.++++|++++.+ ...+ +.|+|+||+|++|+|+++|++.| +.++..+.||+++||+||++++..++
T Consensus 255 ~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 255 VAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKET-GISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHH-SSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred HHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHH-CCCccccCChHHHHHHHHHHHHhChH
Confidence 99999999999987532 1224 68999999999999999999999 67788888999999999999987654
No 11
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.96 E-value=2.3e-30 Score=258.84 Aligned_cols=311 Identities=17% Similarity=0.187 Sum_probs=198.4
Q ss_pred CCCEEEEecCCccEEEEEEECCcEEEEecCCCCcccceEEEEcCCcEEecHHHHHhhhhCCCceecccHHhhCCCCCChh
Q 041815 6 AAPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDKECFVGDAAKNQVAMNPTNTVFDAKRLIGRRFGDVS 85 (475)
Q Consensus 6 ~~~vvGIDlGTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 85 (475)
...++|||+||+++++++.+++.+++. ..|...+|+.. .+.....+++.+...+|+++++. .
T Consensus 12 ~~~~vgiDiGt~~i~~~~~~~~~~~i~--~~g~~~~ps~~------------~~~g~i~d~~~~~~~ik~~~~~~--~-- 73 (377)
T 2ych_A 12 RVEALGLEIGASALKLVEVSGNPPALK--ALASRPTPPGL------------LMEGMVAEPAALAQEIKELLLEA--R-- 73 (377)
T ss_dssp CCCCEEEEECSSEEEEEEEETTTTEEE--EEEEEECCTTS------------EETTEESCHHHHHHHHHHHHHHH--T--
T ss_pred CCceEEEEeCCCeEEEEEEeCCceEEE--EEEeEECCCCc------------ccCCCcCCHHHHHHHHHHHHHHc--C--
Confidence 357899999999999998877665542 23445556532 12233456777777888888641 0
Q ss_pred hhhcccccCeEEEecCCCCceEEEeeCCceeeeeHHHHHHHHHHHHHHHHHhhcCCCCCeEEEEeCCCCCH---------
Q 041815 86 VQSDVKLWPFEVVAGPKDKPMIVVNCKGEEKRYAAEEISSMVLAKMRDIAEDYVGSPVSNAVVTVPAYFTD--------- 156 (475)
Q Consensus 86 v~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~l~~~~L~~l~~~a~~~~~~~~~~~vitVP~~~~~--------- 156 (475)
...+.. .+.-+....... .... ..++++++... ++..++.+++.++.+.++.+|..=..
T Consensus 74 --~~~~~v---~~~i~~~~~~~~-~~~~--~~v~~~el~~~----i~~ea~~~~~~~~~~~vid~~~~~~~~~~~~~~~~ 141 (377)
T 2ych_A 74 --TRKRYV---VTALSNLAVILR-PIQV--PKMPLKEMEEA----VRWEAERYIPFPIDEVVLDFAPLTPLSEVQEGEQV 141 (377)
T ss_dssp --CCCCEE---EEEECGGGCEEE-EEEE--ECCCHHHHHHH----HHHHHGGGCSSCC-CEEEEEEESSCGGGSCTTSEE
T ss_pred --CCcceE---EEEecCCcEEEE-EEEC--CCCCHHHHHHH----HHHHHhhcCCCChhHceEEEEEeCCCCCCCCccee
Confidence 000000 010111111111 1111 23677776543 35577888999999999998732111
Q ss_pred ---------HHHHHHHHHHHHcCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEEEeCCeEEEEEEc
Q 041815 157 ---------SQRQATKDAGAMAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATA 227 (475)
Q Consensus 157 ---------~~r~~l~~a~~~agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~~ 227 (475)
...+++++|++.||++...++.||+|+|++|+.......+..++|+|+||||||+++++. +.. ...
T Consensus 142 ~v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~--g~~---~~~ 216 (377)
T 2ych_A 142 QVMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRG--DKP---LAV 216 (377)
T ss_dssp EEEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEET--TEE---EEE
T ss_pred EEEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEEC--CEE---EEE
Confidence 124889999999999999999999999999865433333678999999999999999984 332 234
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhcCCceeEEEEeccccCccceEEEcHHHHH
Q 041815 228 GDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAVQRLRKDCERAKRILSSTSQTTIEIDSLYEGIDFSSVMTRARFE 307 (475)
Q Consensus 228 ~~~~~GG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~~ 307 (475)
++.++||++||+.|.+.+ +.+ ..+||++|+.++.............+-......+++++++
T Consensus 217 ~~~~~GG~~i~~~i~~~~--------~~~-----------~~~aE~~K~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~ 277 (377)
T 2ych_A 217 RVLTLSGKDFTEAIARSF--------NLD-----------LLAAEEVKRTYGMATLPTEDEELLLDFDAERERYSPGRIY 277 (377)
T ss_dssp EEESCSHHHHHHHHHHHT--------TCC-----------HHHHHHHHHHTC-------------------------CHH
T ss_pred EeeechHHHHHHHHHHHh--------CCC-----------HHHHHHHHhhcccccccccccccccccccccccCCHHHHH
Confidence 568999999999998732 111 3478999998875432111100000001134578999999
Q ss_pred HHHHHHHHHHHHHHHHHHHh--CCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcch
Q 041815 308 ELNMDLFRKCIKHVDMCLRT--GKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEA 372 (475)
Q Consensus 308 ~~~~~~~~~i~~~i~~~l~~--~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~a 372 (475)
+++++.++++.+.+++.|+. ++.....++.|+|+||+|++|.+++.+++.| +.++... ||+++
T Consensus 278 ~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l-~~~v~~~-~P~~~ 342 (377)
T 2ych_A 278 DAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTL-GVNLEPV-NPWEA 342 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHH-TSEEEEC-CGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHh-CCCeEec-Cchhh
Confidence 99999999999999999985 3455567999999999999999999999999 5555443 55443
No 12
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.96 E-value=2.6e-30 Score=254.28 Aligned_cols=229 Identities=18% Similarity=0.160 Sum_probs=167.4
Q ss_pred eHHHHHHHHHHHHHHHHHhhcCCCCCeEE--EEeCCCCCHHHHHHHHHHHHHc--------C------CceeeeeechHH
Q 041815 119 AAEEISSMVLAKMRDIAEDYVGSPVSNAV--VTVPAYFTDSQRQATKDAGAMA--------G------LNVLKIISEPTA 182 (475)
Q Consensus 119 ~~~~l~~~~L~~l~~~a~~~~~~~~~~~v--itVP~~~~~~~r~~l~~a~~~a--------g------l~~~~~i~Ep~A 182 (475)
..+....+++..|++.++...+.. .++| ++||+++++.||+++++++..+ | ++.+++++||+|
T Consensus 96 ~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~A 174 (346)
T 2fsj_A 96 ASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGVG 174 (346)
T ss_dssp TSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTHH
T ss_pred cChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHHH
Confidence 445566677777776543333333 5699 9999999999999999998775 4 356899999999
Q ss_pred HHHHhhhccCCC-CCceEEEEEeCCCceEEEEEEEeCCeEEEEEEcCCCCCchhHHHHHHHHHHHHHHHhhccCCCCCCH
Q 041815 183 AAIAYGLDRKAT-SEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSP 261 (475)
Q Consensus 183 aa~~~~~~~~~~-~~~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~~~l~~~~~~~~~~~~~~~~ 261 (475)
||++|....... +...++|||+||||||+++++++++. .+...+++.++||+++++.|.+++.+++. ... ..
T Consensus 175 Aa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~-~v~~~s~~~~lGg~~i~~~I~~~i~~~~g----~~~--~i 247 (346)
T 2fsj_A 175 AALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDME-PVVELSFSLQIGVGDAISALSRKIAKETG----FVV--PF 247 (346)
T ss_dssp HHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTE-ECGGGCEEESCCHHHHHHHHHHHHHHHHC----CCC--CH
T ss_pred HHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCE-EEeecCCCcchhHHHHHHHHHHHHHHHhC----CCc--CC
Confidence 999983221111 24789999999999999999987766 45554577899999999999998877764 100 10
Q ss_pred HHHHHHHHHHHHHHHHhcCCceeEEEEeccccCccceEEEcHHHH-HHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEE
Q 041815 262 RAVQRLRKDCERAKRILSSTSQTTIEIDSLYEGIDFSSVMTRARF-EELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVI 340 (475)
Q Consensus 262 ~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~-~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvL 340 (475)
. . +.+| .. ..+.+ .+. .++++++ +++++++++++.+.+++.|+++ .++++.|+|
T Consensus 248 ~-~----~~~e-------~~--~~~~~----~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~~i~~IvL 302 (346)
T 2fsj_A 248 D-L----AQEA-------LS--HPVMF----RQK----QVGGPEVSGPILEDLANRIIENIRLNLRGE---VDRVTSLIP 302 (346)
T ss_dssp H-H----HHHH-------TT--SCEEE----TTE----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GGGEEEEEE
T ss_pred C-H----HHHh-------cC--CeEeE----CCc----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcccEEEE
Confidence 0 0 1122 11 11222 222 3568999 9999999999999999999875 346899999
Q ss_pred ecCCCCcHHHHHHHHHHcCCccc-ccCCCCcchhhchHHHHHH
Q 041815 341 VGGSARIPKVQQLLQEFFNGKRL-CKNINPDEAVAYGAAVQAA 382 (475)
Q Consensus 341 vGG~s~~p~v~~~l~~~~~~~~v-~~~~~p~~ava~Gaa~~a~ 382 (475)
+||+|++ +++.|++.|+...+ ....||++|+|+|+..++.
T Consensus 303 ~GGga~l--l~~~l~~~~~~~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 303 VGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp ESTTHHH--HGGGGGGGSTTCBCCCCTTTTTTHHHHHHHHHHH
T ss_pred ECCcHHH--HHHHHHHHCcCcEEeccCCCcHHHHHHHHHHHHh
Confidence 9999998 99999999963322 1267999999999998764
No 13
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.96 E-value=1.3e-28 Score=234.92 Aligned_cols=202 Identities=22% Similarity=0.335 Sum_probs=172.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCceeeeeechHHHHHHhhhccCCCCCceEEE
Q 041815 122 EISSMVLAKMRDIAEDYVGSPVSNAVVTVPAYFTDSQRQATKDAGAMAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLI 201 (475)
Q Consensus 122 ~l~~~~L~~l~~~a~~~~~~~~~~~vitVP~~~~~~~r~~l~~a~~~agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlv 201 (475)
+....+++++++.++...+.....+++++|++|...+|+.++++++.+|++...++.||+|++++++.. ..+|
T Consensus 71 ~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~-------~~~v 143 (272)
T 3h1q_A 71 IGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN-------DGIV 143 (272)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS-------SEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC-------CEEE
Confidence 455678888888888888888889999999999999999999999999999999999999999998753 3599
Q ss_pred EEeCCCceEEEEEEEeCCeEEEEEEcCCCCCchhHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhcCC
Q 041815 202 FDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAVQRLRKDCERAKRILSST 281 (475)
Q Consensus 202 vD~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~ 281 (475)
+|+|||||+++++. .+.. .......+||.+||+.+.+++... .+.+|++|+.++
T Consensus 144 iDiGggst~~~~~~--~g~~---~~~~~~~~Gg~~~~~~l~~~l~~~-------------------~~~ae~~k~~~~-- 197 (272)
T 3h1q_A 144 VDIGGGTTGIAVIE--KGKI---TATFDEPTGGTHLSLVLAGSYKIP-------------------FEEAETIKKDFS-- 197 (272)
T ss_dssp EEECSSCEEEEEEE--TTEE---EEECCBSCCHHHHHHHHHHHHTCC-------------------HHHHHHHHHSST--
T ss_pred EEECCCcEEEEEEE--CCEE---EEEecCCCcHHHHHHHHHHHhCCC-------------------HHHHHHHHHhcC--
Confidence 99999999999987 3332 245678999999999998877311 247888888765
Q ss_pred ceeEEEEeccccCccceEEEcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCc
Q 041815 282 SQTTIEIDSLYEGIDFSSVMTRARFEELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGK 361 (475)
Q Consensus 282 ~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~ 361 (475)
+++++++++.+.++++.+.+.+.++..+ +++.|+|+||++++|++++.+++.| +.
T Consensus 198 --------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~~l-~~ 252 (272)
T 3h1q_A 198 --------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSRFL-GK 252 (272)
T ss_dssp --------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHHHH-SS
T ss_pred --------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHHHh-CC
Confidence 5889999999999999999999998753 4789999999999999999999999 78
Q ss_pred ccccCCCCcchhhchHHHHH
Q 041815 362 RLCKNINPDEAVAYGAAVQA 381 (475)
Q Consensus 362 ~v~~~~~p~~ava~Gaa~~a 381 (475)
++..+.||++++|+|||++|
T Consensus 253 ~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 253 EVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp CCBCCSSGGGHHHHHHHTTC
T ss_pred CccccCChHHHHHHHHHhcC
Confidence 88889999999999999874
No 14
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.96 E-value=6.6e-28 Score=242.25 Aligned_cols=200 Identities=14% Similarity=0.150 Sum_probs=159.4
Q ss_pred HHHHHHHHHHHHHcCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEEEeCCeEEEEEEcCCCCCchh
Q 041815 156 DSQRQATKDAGAMAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGE 235 (475)
Q Consensus 156 ~~~r~~l~~a~~~agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~ 235 (475)
....+.+.+|++.|||++..++.||.|||++++.+... +..++|||+||||||+++++ ++.+ ...+..++||+
T Consensus 167 ~~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~~--~~gv~vvDiGggttdisi~~--~g~~---~~~~~i~~GG~ 239 (419)
T 4a2a_A 167 LKVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPEK--DRGVVVVNLGYNFTGLIAYK--NGVP---IKISYVPVGMK 239 (419)
T ss_dssp HHHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHHHH--HHCEEEEEECSSSEEEEEEE--TTEE---EEEEEESCCHH
T ss_pred HHHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhccccc--cCCEEEEEECCCcEEEEEEE--CCEE---EEEEecccHHH
Confidence 35678899999999999999999999999998765433 56899999999999999998 4443 23456899999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhcCC-----ceeEEEEeccccCccceEEEcHHHHHHHH
Q 041815 236 DFDNRMVNHFIQEFKRKTEKDISGSPRAVQRLRKDCERAKRILSST-----SQTTIEIDSLYEGIDFSSVMTRARFEELN 310 (475)
Q Consensus 236 ~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~-----~~~~~~i~~~~~~~~~~~~itr~~~~~~~ 310 (475)
+||+.|...+... .++||++|+.++.. ....+.++.... .....++|++|++++
T Consensus 240 ~it~dIa~~l~~~-------------------~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~~--~~~~~is~~~l~~ii 298 (419)
T 4a2a_A 240 HVIKDVSAVLDTS-------------------FEESERLIITHGNAVYNDLKEEEIQYRGLDG--NTIKTTTAKKLSVII 298 (419)
T ss_dssp HHHHHHHHHHTCC-------------------HHHHHHHHHHHCCSCCTTCCCCEEEEECTTS--CSEEEEEHHHHHHHH
T ss_pred HHHHHHHHHHCCC-------------------HHHHHHHHHHhccCcccCCCCceEEEeecCC--ccceEEcHHHHHHHH
Confidence 9999998765322 34899999998742 345677776543 356889999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCC------CCCCCCeEEEecCCCCcHHHHHHHHHHcCCcccccC-----------------C
Q 041815 311 MDLFRKCIKHVDMCLRTGKT------DNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKN-----------------I 367 (475)
Q Consensus 311 ~~~~~~i~~~i~~~l~~~~~------~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~-----------------~ 367 (475)
+|.++++.+.+++.|+.++. ....++.|+|+||+|++|++++.+++.| +.++... .
T Consensus 299 ~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~-g~~vri~~~~~~~p~~~~~~~~~~~ 377 (419)
T 4a2a_A 299 HARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVF-KSPVRTGCYANSDRPSIINADEVAN 377 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHH-TSCEEECCGGGSSSCCCBTCHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHH-CCCeEEEecCCCCchhccCcccccC
Confidence 99999999999999999887 3456899999999999999999999999 5544322 3
Q ss_pred CCcchhhchHHHHHHHH
Q 041815 368 NPDEAVAYGAAVQAAVL 384 (475)
Q Consensus 368 ~p~~ava~Gaa~~a~~~ 384 (475)
+|..+++.|.++++...
T Consensus 378 ~P~~~t~~Gl~~~~~~~ 394 (419)
T 4a2a_A 378 DPSFAAAFGNVFAVSEN 394 (419)
T ss_dssp CGGGHHHHHTTCC----
T ss_pred CchHHHHHHHHHHHhhc
Confidence 88999999999987654
No 15
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.96 E-value=4e-28 Score=245.67 Aligned_cols=227 Identities=16% Similarity=0.127 Sum_probs=163.2
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHH-HHcCCceeeeeechHHHHHH-hhhccCCCCCceEEEEEeCCCceEEEEEEEeCCe
Q 041815 143 VSNAVVTVPAYFTDSQRQATKDAG-AMAGLNVLKIISEPTAAAIA-YGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGI 220 (475)
Q Consensus 143 ~~~~vitVP~~~~~~~r~~l~~a~-~~agl~~~~~i~Ep~Aaa~~-~~~~~~~~~~~~vlvvD~Gggt~dvsv~~~~~~~ 220 (475)
...+++|+|++|+..+|+++.+++ +.+|++.+.+++||+||+++ |........+.+.+|||+|+||||++++. .|.
T Consensus 107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~~~~glVvDiG~gtt~v~~v~--~G~ 184 (418)
T 1k8k_A 107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVA--EGY 184 (418)
T ss_dssp GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSCCCCEEEEEESSSCEEEEEEE--TTE
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCCCCeEEEEEcCCCceEEEEeE--CCE
Confidence 357999999999999999999999 88999999999999999987 42111111123679999999999999986 343
Q ss_pred EEEEEEcCCCCCchhHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhcCCc-----------------e
Q 041815 221 FKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAVQRLRKDCERAKRILSSTS-----------------Q 283 (475)
Q Consensus 221 ~~v~~~~~~~~~GG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~-----------------~ 283 (475)
. +.......++||+++|+.|.++|.+++. ......+ .+.+|++|+.+.... .
T Consensus 185 ~-~~~~~~~~~lGG~~lt~~l~~~l~~~~~---~~~~~~~-------~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~ 253 (418)
T 1k8k_A 185 V-IGSCIKHIPIAGRDITYFIQQLLRDREV---GIPPEQS-------LETAKAVKERYSYVCPDLVKEFNKYDTDGSKWI 253 (418)
T ss_dssp E-CGGGCEEESCSHHHHHHHHHHHHHTTCC---CCCGGGH-------HHHHHHHHHHHCCCCSCHHHHHHHHHHSGGGTC
T ss_pred E-cccceEEEeCcHHHHHHHHHHHHHhcCC---CCCCHHH-------HHHHHHHHHhhchhcccHHHHHHhhcccccccc
Confidence 2 2222255789999999999999875431 1111111 234666666654321 2
Q ss_pred eEEEEeccccCccceEEEcHHHH---HHHHHHHH------HHHHHHHHHHHHhCC--CCCCCCCeEEEecCCCCcHHHHH
Q 041815 284 TTIEIDSLYEGIDFSSVMTRARF---EELNMDLF------RKCIKHVDMCLRTGK--TDNSSVDDVVIVGGSARIPKVQQ 352 (475)
Q Consensus 284 ~~~~i~~~~~~~~~~~~itr~~~---~~~~~~~~------~~i~~~i~~~l~~~~--~~~~~i~~VvLvGG~s~~p~v~~ 352 (475)
..+.++....+.+..+.+++++| |.++.|.+ ..|.+.|.+.|..+. +....++.|+|+||+|++|++++
T Consensus 254 ~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~~~ 333 (418)
T 1k8k_A 254 KQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGR 333 (418)
T ss_dssp EEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTHHH
T ss_pred eeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccHHH
Confidence 45677665555666789999998 55555532 468888999998754 33455789999999999999999
Q ss_pred HHHHHcCC-----------------------cccccCCCCcchhhchHHHHHH
Q 041815 353 LLQEFFNG-----------------------KRLCKNINPDEAVAYGAAVQAA 382 (475)
Q Consensus 353 ~l~~~~~~-----------------------~~v~~~~~p~~ava~Gaa~~a~ 382 (475)
+|++.+.. .++..+.+|..++++||+++|.
T Consensus 334 rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 386 (418)
T 1k8k_A 334 RLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAS 386 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTT
T ss_pred HHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHc
Confidence 99876521 1234455788999999999985
No 16
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.95 E-value=3.7e-28 Score=242.16 Aligned_cols=302 Identities=16% Similarity=0.197 Sum_probs=197.6
Q ss_pred CCEEEEecCCccEEEEEEECCcEEEEecCCCCcccceEEEEc----------CCcEEecHHHHHhhhhCCCceecccHHh
Q 041815 7 APAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT----------DKECFVGDAAKNQVAMNPTNTVFDAKRL 76 (475)
Q Consensus 7 ~~vvGIDlGTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~----------~~~~~~G~~A~~~~~~~~~~~~~~~k~~ 76 (475)
...|+||+||+++++++..++.|..+ +||+++.. ....++|++|.... .. ..+++
T Consensus 5 ~~~ivID~Gs~~~k~G~~~~~~p~~~--------~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~----~~--~~~~~- 69 (375)
T 2fxu_A 5 TTALVCDNGSGLVKAGFAGDDAPRAV--------FPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR----GI--LTLKY- 69 (375)
T ss_dssp CCCEEEEECSSEEEEEETTCSSCSEE--------EECCEEEECTTTC-------CCEEHHHHHHHT----TS--EEEEC-
T ss_pred CceEEEECCCCeEEEEECCCCCCcee--------eccccccccccccccCCCCCCeEechhHhhcC----cc--cceec-
Confidence 46789999999999999865554422 25555542 24567898887641 10 11111
Q ss_pred hCCCCCChhhhhcccccCeEEEecCCCCceEEEeeCCceeee-eHHHHHHHHHHHHHHHHHhhcCC--CCCeEEEEeCCC
Q 041815 77 IGRRFGDVSVQSDVKLWPFEVVAGPKDKPMIVVNCKGEEKRY-AAEEISSMVLAKMRDIAEDYVGS--PVSNAVVTVPAY 153 (475)
Q Consensus 77 lg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~-~~~~l~~~~L~~l~~~a~~~~~~--~~~~~vitVP~~ 153 (475)
|++ +|....| ..+.++.+++. +.++. ....+++|+|++
T Consensus 70 -----------------Pi~---------------~G~i~d~d~~e~i~~~~~~-------~~L~~~~~~~~vvit~p~~ 110 (375)
T 2fxu_A 70 -----------------PIE---------------HGIITNWDDMEKIWHHTFY-------NELRVAPEEHPTLLTEAPL 110 (375)
T ss_dssp -----------------SEE---------------TTEECCHHHHHHHHHHHHH-------TTSCCCGGGSCEEEEECTT
T ss_pred -----------------ccc---------------CCcccCHHHHHHHHHHHHH-------HhcCCCCcCCcEEEEeCCC
Confidence 111 1211112 23334444431 22332 234599999999
Q ss_pred CCHHHHHHHHHH-HHHcCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEEEeCCeEEEEEEcCCCCC
Q 041815 154 FTDSQRQATKDA-GAMAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHL 232 (475)
Q Consensus 154 ~~~~~r~~l~~a-~~~agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~~ 232 (475)
++..+|+++.++ .+.+|++.+.+++||+|||++++. .+.+|||+|+||||++.+. +|.. +.......++
T Consensus 111 ~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~-------~~~lVvDiG~gtt~v~~v~--~G~~-~~~~~~~~~~ 180 (375)
T 2fxu_A 111 NPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGR-------TTGIVLDSGDGVTHNVPIY--EGYA-LPHAIMRLDL 180 (375)
T ss_dssp CCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTC-------SSEEEEEECSSCEEEEEEE--TTEE-CGGGCEEESC
T ss_pred CcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCC-------CeEEEEEcCCCceEEeEeE--CCEE-eccceEEecc
Confidence 999999988776 588899999999999999999874 4689999999999987765 4432 2222345789
Q ss_pred chhHHHHHHHHHHHHHHHhhccCCCC--CCHHHHHHHHHHH---------HHHHHHhcCCceeEEEEeccccCccceEEE
Q 041815 233 GGEDFDNRMVNHFIQEFKRKTEKDIS--GSPRAVQRLRKDC---------ERAKRILSSTSQTTIEIDSLYEGIDFSSVM 301 (475)
Q Consensus 233 GG~~id~~l~~~l~~~~~~~~~~~~~--~~~~~~~~l~~~~---------e~~K~~ls~~~~~~~~i~~~~~~~~~~~~i 301 (475)
||+++|+.|.++|..+. + .+. .+....+++++.+ +..|..++......+.+| ++ ..+.+
T Consensus 181 GG~~lt~~l~~~l~~~~---~--~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lp---dg--~~i~i 250 (375)
T 2fxu_A 181 AGRDLTDYLMKILTERG---Y--SFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP---DG--QVITI 250 (375)
T ss_dssp CHHHHHHHHHHHHHHHT---C--CCCSHHHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT---TS--CEEEE
T ss_pred CHHHHHHHHHHHHHhcC---C--CCCcHHHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECC---CC--CEEEE
Confidence 99999999999997651 1 121 1223344444432 222223333334455554 22 34678
Q ss_pred cHHHH---HHHHHHH-----HHHHHHHHHHHHHhCCC--CCCCCCeEEEecCCCCcHHHHHHHHHHcCC-------cccc
Q 041815 302 TRARF---EELNMDL-----FRKCIKHVDMCLRTGKT--DNSSVDDVVIVGGSARIPKVQQLLQEFFNG-------KRLC 364 (475)
Q Consensus 302 tr~~~---~~~~~~~-----~~~i~~~i~~~l~~~~~--~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~-------~~v~ 364 (475)
+++.| |.+++|. ...|.+.+.+.|..+.. ....+++|+|+||+|++|+++++|++.+.. .++.
T Consensus 251 ~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~ 330 (375)
T 2fxu_A 251 GNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKII 330 (375)
T ss_dssp STHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEE
T ss_pred ChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEE
Confidence 88877 3344543 34577888888886532 233468899999999999999999998731 4555
Q ss_pred cCCCCcchhhchHHHHHH
Q 041815 365 KNINPDEAVAYGAAVQAA 382 (475)
Q Consensus 365 ~~~~p~~ava~Gaa~~a~ 382 (475)
.+.||..++++|++++|.
T Consensus 331 ~~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 331 APPERKYSVWIGGSILAS 348 (375)
T ss_dssp CCTTTTSHHHHHHHHHHH
T ss_pred cCCCCCccEEcchHHhhC
Confidence 677999999999999987
No 17
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.91 E-value=2.8e-24 Score=209.48 Aligned_cols=226 Identities=18% Similarity=0.206 Sum_probs=149.2
Q ss_pred eeHHHHHHHHHHHHHHHHHhhcCCCCCeEEEEeCCC-CCHH--HH--HHHHHH------------HHHcCCceeeeeech
Q 041815 118 YAAEEISSMVLAKMRDIAEDYVGSPVSNAVVTVPAY-FTDS--QR--QATKDA------------GAMAGLNVLKIISEP 180 (475)
Q Consensus 118 ~~~~~l~~~~L~~l~~~a~~~~~~~~~~~vitVP~~-~~~~--~r--~~l~~a------------~~~agl~~~~~i~Ep 180 (475)
+++..+++.+ ..|++ +.. .+.+ ..+|+++|.. |... |+ +++.+- .+.+++..+.+++||
T Consensus 74 ~~~~~l~~i~-~aL~~-~~~-~~~~-~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e~ 149 (320)
T 2zgy_A 74 YSDVNVVAVH-HALLT-SGL-PVSE-VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPES 149 (320)
T ss_dssp GSHHHHHHHH-HHHHH-HSC-CSCE-EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEESS
T ss_pred chHHHHHHHH-HHHHH-cCC-CCce-EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecCc
Confidence 5677676644 44443 211 1222 4699999976 6431 11 222221 233456789999999
Q ss_pred HHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEEEeCCeEEEEEEcCCCCCchhHHHHHHHHHHHHHHHhhccCCCCCC
Q 041815 181 TAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGS 260 (475)
Q Consensus 181 ~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~~~l~~~~~~~~~~~~~~~ 260 (475)
.||+++++.+... +..++|+|+||||||+++++ ++.+.+...+++.++||.+||+.|.+++.++ +.++ +
T Consensus 150 ~aa~~~~~~~~~~--~~~~~vvDiGggttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~-----~~~i--~ 218 (320)
T 2zgy_A 150 IPAGYEVLQELDE--LDSLLIIDLGGTTLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSLA-----RTKG--S 218 (320)
T ss_dssp HHHHHHHHHHSCT--TCEEEEEEECSSCEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTCC-----SBGG--G
T ss_pred HHHHHhhhccccC--CCCEEEEEcCCCeEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHHc-----CCCC--C
Confidence 9999998744332 67999999999999999998 4444456566778999999999999988542 2111 1
Q ss_pred HHHHHHHHHHHHHH-HHHhcCCceeEEEEeccccCccceEEEcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEE
Q 041815 261 PRAVQRLRKDCERA-KRILSSTSQTTIEIDSLYEGIDFSSVMTRARFEELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVV 339 (475)
Q Consensus 261 ~~~~~~l~~~~e~~-K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Vv 339 (475)
.. .+|++ |.. . . +. .....+...-+.+++.+++++.++++.+.+.+.+++. .+++.|+
T Consensus 219 ~~-------~ae~~lk~~-~-~-------~~-~~~~~i~~~~~~~~~~~~i~~~~~~~~~~i~~~i~~~----~~~~~vv 277 (320)
T 2zgy_A 219 SY-------LADDIIIHR-K-D-------NN-YLKQRINDENKISIVTEAMNEALRKLEQRVLNTLNEF----SGYTHVM 277 (320)
T ss_dssp HH-------HHHHHHHTT-T-C-------HH-HHHHHSSSSCTHHHHHHHHHHHHHHHHHHHHHHHTTC----CCCCEEE
T ss_pred HH-------HHHHHHHHh-h-h-------hh-cccceecCchhhHHHHHHHHHHHHHHHHHHHHHHHhh----cCCCeEE
Confidence 22 23333 221 0 0 00 0000000011346667777788888777777777662 4689999
Q ss_pred EecCCCCcHHHHHHHHHHcCCc--ccccCCCCcchhhchHHHHH
Q 041815 340 IVGGSARIPKVQQLLQEFFNGK--RLCKNINPDEAVAYGAAVQA 381 (475)
Q Consensus 340 LvGG~s~~p~v~~~l~~~~~~~--~v~~~~~p~~ava~Gaa~~a 381 (475)
|+||+|++ +++.|++.|+.. ++....||++|+|+||+++|
T Consensus 278 l~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 278 VIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp EESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred EECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 99999987 999999999432 57778899999999999875
No 18
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.87 E-value=1.9e-23 Score=209.28 Aligned_cols=221 Identities=15% Similarity=0.172 Sum_probs=90.7
Q ss_pred CeEEEEeCCCCCHHHHHHHHHH-HHHcCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEEEeCCeEE
Q 041815 144 SNAVVTVPAYFTDSQRQATKDA-GAMAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFK 222 (475)
Q Consensus 144 ~~~vitVP~~~~~~~r~~l~~a-~~~agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~~~~~~~~ 222 (475)
..+++|+|+.++..+|+++.++ .+.+|++.+.+++||.||+++++. .+.+|||+|+|||+++.+. +|..
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~-------~~~lVVDiG~g~T~v~pv~--~G~~- 174 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL-------LTGVVVDSGDGVTHICPVY--EGFS- 174 (394)
T ss_dssp --------------------------------------------------------CCEEEECSSCEEEECEE--TTEE-
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC-------ceEEEEEcCCCceEeeeeE--CCEE-
Confidence 3589999999999999998886 478899999999999999999874 3669999999999998775 3432
Q ss_pred EEEEcCCCCCchhHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHH--------HHHHHh-cCCceeEEEEecccc
Q 041815 223 VKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAVQRLRKDCE--------RAKRIL-SSTSQTTIEIDSLYE 293 (475)
Q Consensus 223 v~~~~~~~~~GG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e--------~~K~~l-s~~~~~~~~i~~~~~ 293 (475)
+.......++||+++|+.|.++|..+. +......+....+.+++... ..+... +......+.+| +
T Consensus 175 ~~~~~~~~~~GG~~lt~~l~~~l~~~~---~~~~~~~~~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~~~~lp---d 248 (394)
T 1k8k_B 175 LPHLTRRLDIAGRDITRYLIKLLLLRG---YAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLP---D 248 (394)
T ss_dssp CSTTCEEESCCHHHHHHHHHHHHHHTT---CCCCTTTTHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT---T
T ss_pred cccceEEeeccHHHHHHHHHHHHHhcC---CCCCcHHHHHHHHHHHHhheeEecCHHHHHHhhccCCcCceEEECC---C
Confidence 111123468999999999999987641 11111234444444443321 011000 11112333333 2
Q ss_pred CccceEEEcHHHHH---HHHHHH-----HHHHHHHHHHHHHhCCCC--CCCCCeEEEecCCCCcHHHHHHHHHHcCC---
Q 041815 294 GIDFSSVMTRARFE---ELNMDL-----FRKCIKHVDMCLRTGKTD--NSSVDDVVIVGGSARIPKVQQLLQEFFNG--- 360 (475)
Q Consensus 294 ~~~~~~~itr~~~~---~~~~~~-----~~~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~v~~~l~~~~~~--- 360 (475)
+ ..+.++++.|+ .+++|. ...|.+.|.+.|..+..+ ....++|+|+||+|++|++.++|++.+..
T Consensus 249 g--~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el~~~~~ 326 (394)
T 1k8k_B 249 G--RIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYL 326 (394)
T ss_dssp S--CEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHHHHHHHH
T ss_pred C--CEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHHHHHHHh
Confidence 3 24667777763 334442 245777888888876432 23367899999999999999999987731
Q ss_pred ---------------cccccCCCCcchhhchHHHHHH
Q 041815 361 ---------------KRLCKNINPDEAVAYGAAVQAA 382 (475)
Q Consensus 361 ---------------~~v~~~~~p~~ava~Gaa~~a~ 382 (475)
.++..+.+|..++++|++++|.
T Consensus 327 ~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 363 (394)
T 1k8k_B 327 ERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLAD 363 (394)
T ss_dssp HHTCSSCCCTTCCCCC---------------------
T ss_pred hhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhC
Confidence 1233356788999999999976
No 19
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.82 E-value=1.6e-18 Score=165.17 Aligned_cols=181 Identities=20% Similarity=0.162 Sum_probs=124.0
Q ss_pred cCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEEEeCCeEEEEEEcCCCCCchhHHHHHHHHHHHHH
Q 041815 169 AGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQE 248 (475)
Q Consensus 169 agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~~~l~~~ 248 (475)
++......|+|++|+++++..... ....|+|+|||+++++++. .++.++.....+....|+.+|++.++++|...
T Consensus 69 a~~~~~~~Vne~~aha~a~~~~~~----~~~~vl~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d~~a~~l~~~ 143 (276)
T 4ehu_A 69 NYSDADKQISELSCHARGVNFIIP----ETRTIIDIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLDVMAKIIEVD 143 (276)
T ss_dssp GCCSCSEECCHHHHHHHHHHHHST----TCCEEEEECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHHHHHHHHTCC
T ss_pred HhhCCCcccchHHHHHHHHHHhCC----CCCeEEEEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHHHHHHHhccC
Confidence 566788999999999998876543 3457899999999998884 56788888888889999999999999888544
Q ss_pred HHhhcc--------CCCCCCHHHHHHHHHHHHHHHHHhcCCceeEEEEeccccCccceEEEcHHHHHHHHHHHHHHHHHH
Q 041815 249 FKRKTE--------KDISGSPRAVQRLRKDCERAKRILSSTSQTTIEIDSLYEGIDFSSVMTRARFEELNMDLFRKCIKH 320 (475)
Q Consensus 249 ~~~~~~--------~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~ 320 (475)
+..... .++....... ..... +..+ ..+ ...++++..+.+.+.+.
T Consensus 144 ~~~~~~~~~~a~~~~~i~~~~~~f--~~s~~---~~~~-------------~~~---------~~~~di~a~~~~~v~~~ 196 (276)
T 4ehu_A 144 VSELGSISMNSQNEVSISSTCTVF--AESEV---ISHL-------------SEN---------AKIEDIVAGIHTSVAKR 196 (276)
T ss_dssp GGGHHHHHTTCSSCCCCCCCSHHH--HHHHH---HHHH-------------HTT---------CCHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHhcCCCCCCcCCccchh--hhhHH---HHhh-------------hcc---------ccHHHHHHHHHHHHHHH
Confidence 331110 0000000000 00000 0000 001 11244555555555555
Q ss_pred HHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHHHHHHcC
Q 041815 321 VDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSG 386 (475)
Q Consensus 321 i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~~ 386 (475)
+.....+. ..++.|+|+||.+++|.|++.+++.| +.++..+.||++++|+|||++|.....
T Consensus 197 l~~~~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~-g~~~~~p~~p~~~~A~GAAl~A~~~~~ 257 (276)
T 4ehu_A 197 VSSLVKRI----GVQRNVVMVGGVARNSGIVRAMAREI-NTEIIVPDIPQLTGALGAALYAFDEAK 257 (276)
T ss_dssp HHHHHHHH----CCCSSEEEESGGGGCHHHHHHHHHHH-TSCEECCSSGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHhc----ccCCeEEEecCccchHHHHHHHHHHH-CCCeeeCCCcchHHHHHHHHHHHHHHh
Confidence 54444432 34679999999999999999999999 889999999999999999999976543
No 20
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.81 E-value=1.7e-19 Score=177.33 Aligned_cols=207 Identities=14% Similarity=0.203 Sum_probs=139.9
Q ss_pred CeEEEEeCCCCCHHHH-HHHHHHHHHcCC------------ceeeeeechHHHHHHhhhccCCC----CCceEEEEEeCC
Q 041815 144 SNAVVTVPAYFTDSQR-QATKDAGAMAGL------------NVLKIISEPTAAAIAYGLDRKAT----SEKNVLIFDLGG 206 (475)
Q Consensus 144 ~~~vitVP~~~~~~~r-~~l~~a~~~agl------------~~~~~i~Ep~Aaa~~~~~~~~~~----~~~~vlvvD~Gg 206 (475)
..+++.+|..+...+| +++++++...+- ..+.+++||.||+++++.+.... .+..++|+|+||
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGg 193 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGS 193 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECS
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCC
Confidence 3689999998887777 589988875542 57889999999999998654211 378899999999
Q ss_pred CceEEEEEEEeCCeEEEEEEcCCCCCchhHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhcCCceeEE
Q 041815 207 GTFDVSLLTIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAVQRLRKDCERAKRILSSTSQTTI 286 (475)
Q Consensus 207 gt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~ 286 (475)
||||++++. ++.+. ...++....||..+++.+.+++.+++. +.. .+.. ..++.+ . +
T Consensus 194 gTtd~~v~~--~~~~~-~~~s~s~~~G~~~~~~~i~~~l~~~~~---g~~--l~~~-------~i~~g~-------~--~ 249 (355)
T 3js6_A 194 GTTIIDTYQ--NMKRV-EEESFVINKGTIDFYKRIASHVSKKSE---GAS--ITPR-------MIEKGL-------E--Y 249 (355)
T ss_dssp SCEEEEEEE--TTEEC-GGGCEEESCCHHHHHHHHHHHTC-------------CHH-------HHHSCC-------C---
T ss_pred CcEEEEEEc--CCEEc-cccccCcchHHHHHHHHHHHHHHHhcC---CCc--CCHH-------HHhcCC-------c--c
Confidence 999999993 33321 112334689999999999999977642 111 1111 111110 0 0
Q ss_pred EEeccccCccceEEEcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHH--HHHHHHHHcCCcccc
Q 041815 287 EIDSLYEGIDFSSVMTRARFEELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPK--VQQLLQEFFNGKRLC 364 (475)
Q Consensus 287 ~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~--v~~~l~~~~~~~~v~ 364 (475)
.... .+......+ .+.+++++++++++|.+.+++.+.+ +..++.|+|+||++.++. |.+.|++.|+..
T Consensus 250 ~~~~--~~~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~--- 319 (355)
T 3js6_A 250 KQCK--LNQKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEKA--- 319 (355)
T ss_dssp --------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEECC---
T ss_pred cccc--ccccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCCC---
Confidence 0000 000001122 2456777888888888888887764 355799999999999988 889999988432
Q ss_pred cCCCCcchhhchHHHHHHHHcC
Q 041815 365 KNINPDEAVAYGAAVQAAVLSG 386 (475)
Q Consensus 365 ~~~~p~~ava~Gaa~~a~~~~~ 386 (475)
.||.+|+|+|+..++..+.+
T Consensus 320 --~~p~~anA~G~~~~~~~~~~ 339 (355)
T 3js6_A 320 --DDSQFSNVRGYEKLGELLKN 339 (355)
T ss_dssp --SSGGGHHHHHHHHHHHHHHH
T ss_pred --CCcHHHHHHHHHHHHHHHHh
Confidence 79999999999999887754
No 21
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.75 E-value=2.8e-19 Score=174.30 Aligned_cols=204 Identities=14% Similarity=0.157 Sum_probs=140.1
Q ss_pred CeEEEEeCCCCCH--HHHHHHHHHHHHc--------C------CceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCC
Q 041815 144 SNAVVTVPAYFTD--SQRQATKDAGAMA--------G------LNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGG 207 (475)
Q Consensus 144 ~~~vitVP~~~~~--~~r~~l~~a~~~a--------g------l~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Ggg 207 (475)
..+++++|..+-. .+|+.+++....- | +..+.+++||.+|.+.+. ...+...++|+|+|||
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~---~~~~~~~v~vvDiGgg 182 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ---ENFKNKNVAVIDFGGL 182 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC---CCCTTCEEEEEEECSS
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc---hhhccCCEEEEEeCCC
Confidence 4689999976553 3677787776621 1 245778899998887653 1223789999999999
Q ss_pred ceEEEEEEEeCCeEEEEEEcCCCCCchhHHHHHHHHHHHH-HHHhhccCCCCCCHHHHHHHHHHHHHHHHHhcCCceeEE
Q 041815 208 TFDVSLLTIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQ-EFKRKTEKDISGSPRAVQRLRKDCERAKRILSSTSQTTI 286 (475)
Q Consensus 208 t~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~ 286 (475)
|||++++.. +.+ +...++...+||+++++.|.+++.+ ++ +..+.. . .+|++|+. . . .
T Consensus 183 Ttd~~v~~~--g~~-~~~~~~~~~~G~~~~~~~i~~~l~~~~~----g~~i~~--~-------~~e~i~~~-g-~--~-- 240 (329)
T 4apw_A 183 NMGFSLYRN--CVV-NPSERFIEEHGVKDLIIRVGDALTDLNN----GNLITN--E-------QAESALNN-G-Y--M-- 240 (329)
T ss_dssp CEEEEEEET--TEE-CGGGCEEESCCHHHHHHHHHTSSSSCSS----CSCTTS--B-------TTTTCSSS-C-S--S--
T ss_pred cEEEEEEEC--CEE-eeccccchhhHHHHHHHHHHHHHHhhcc----CCCCCH--H-------HHHHHHhc-C-C--c--
Confidence 999999983 332 1112345789999999999887765 33 222211 1 23333332 0 0 0
Q ss_pred EEeccccCccceEEEcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCcccccC
Q 041815 287 EIDSLYEGIDFSSVMTRARFEELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKN 366 (475)
Q Consensus 287 ~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~ 366 (475)
..+.+. ..++.+++++++++++++|.+.+++. . ..+..++.|+|+||++.+ +.+.|++.| +.++...
T Consensus 241 -----~~g~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~-~---~~~~~~~~IvltGGGA~l--~~~~l~~~~-~~~v~v~ 307 (329)
T 4apw_A 241 -----KKGGEI-DTESSTVIKKVKEKFLKDAIKLIEKR-G---FKLDQLDSLIFIGGTTQK--LKEQISKTY-PNNSIIT 307 (329)
T ss_dssp -----CEECTT-CCSTTHHHHHHHHHHHHHHHHHHHHH-T---CCTTSCSEEEEESTTHHH--HHHHHHHHS-TTCEECC
T ss_pred -----ccCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHc-C---CCHHHccEEEEECChHHH--HHHHHHHHc-CCCCEec
Confidence 001111 13456788888888888888888776 3 445557999999999987 679999999 4457778
Q ss_pred CCCcchhhchHHHHHHHHc
Q 041815 367 INPDEAVAYGAAVQAAVLS 385 (475)
Q Consensus 367 ~~p~~ava~Gaa~~a~~~~ 385 (475)
.||.+|+|+|+..++...-
T Consensus 308 ~~P~~a~a~G~~~~~~~k~ 326 (329)
T 4apw_A 308 NNSQWTTCEGLYKVAVAKY 326 (329)
T ss_dssp SSGGGHHHHHHHHHHHHHH
T ss_pred CCChhhHHHHHHHHHhhhh
Confidence 8999999999999876553
No 22
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.71 E-value=7.2e-18 Score=169.36 Aligned_cols=223 Identities=17% Similarity=0.141 Sum_probs=142.3
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHH-HHcCCceeeeeechHHHHHHhhhccCCC-CCceEEEEEeCCCceEEEEEEEeCCeE
Q 041815 144 SNAVVTVPAYFTDSQRQATKDAG-AMAGLNVLKIISEPTAAAIAYGLDRKAT-SEKNVLIFDLGGGTFDVSLLTIEKGIF 221 (475)
Q Consensus 144 ~~~vitVP~~~~~~~r~~l~~a~-~~agl~~~~~i~Ep~Aaa~~~~~~~~~~-~~~~vlvvD~Gggt~dvsv~~~~~~~~ 221 (475)
..+++|.|+..+...|+++.+++ +.+|++.+.++.+|.+|+++.+...... ...+-+|||+|+|+|+++.+. +|..
T Consensus 124 ~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~--~G~~ 201 (427)
T 3dwl_A 124 HYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVA--EGYV 201 (427)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEE--TTEE
T ss_pred CcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccccCCCceEEEEECCCCceEEEEEE--CCEE
Confidence 46999999999999999998887 7899999999999999999888543211 135689999999999999884 3322
Q ss_pred EEEEEcCCCCCchhHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhcCCc-----------eeEEEEec
Q 041815 222 KVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAVQRLRKDCERAKRILSSTS-----------QTTIEIDS 290 (475)
Q Consensus 222 ~v~~~~~~~~~GG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~-----------~~~~~i~~ 290 (475)
- ........+||+++|+.|.++|..+... ..+. +.+|..|+.+.-.. .....+..
T Consensus 202 l-~~~~~rl~~gG~~lt~~L~~lL~~~~~~------~~~~-------~~~~~IKe~~cyv~~d~~~e~~~~~~~~~~~~~ 267 (427)
T 3dwl_A 202 I-GSSIKTMPLAGRDVTYFVQSLLRDRNEP------DSSL-------KTAERIKEECCYVCPDIVKEFSRFDREPDRYLK 267 (427)
T ss_dssp C-GGGCEEESCCHHHHHHHHHHTTC--------------C-------HHHHHHHHHHCCCCSCHHHHHHHTTC-----CC
T ss_pred e-hhhheeccccHHHHHHHHHHHHHHcCCC------chhH-------HHHHHHHHhcCcccCCHHHHHHHhhcCccccce
Confidence 0 1111225899999999999988665431 1111 23444444432110 00000110
Q ss_pred --c--ccCccceEEEcHHHH---HHHHHHH------HHHHHHHHHHHHHhCCCC--CCCCCeEEEecCCCCcHHHHHHHH
Q 041815 291 --L--YEGIDFSSVMTRARF---EELNMDL------FRKCIKHVDMCLRTGKTD--NSSVDDVVIVGGSARIPKVQQLLQ 355 (475)
Q Consensus 291 --~--~~~~~~~~~itr~~~---~~~~~~~------~~~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~v~~~l~ 355 (475)
+ .+|....+.+..+.| |.++.|- ...|.+.+.+.|.++..+ ..-.++|+|+||+|.+|++.++|+
T Consensus 268 ~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~ 347 (427)
T 3dwl_A 268 YASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQ 347 (427)
T ss_dssp BCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHHHH
T ss_pred eEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHHHH
Confidence 1 123333566676765 3344442 245778888888875432 222467999999999999999998
Q ss_pred HHcC---------------------CcccccCCCCcchhhchHHHHHH
Q 041815 356 EFFN---------------------GKRLCKNINPDEAVAYGAAVQAA 382 (475)
Q Consensus 356 ~~~~---------------------~~~v~~~~~p~~ava~Gaa~~a~ 382 (475)
+.+. ..++..+.++..++.+|++++|.
T Consensus 348 ~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilas 395 (427)
T 3dwl_A 348 RDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQ 395 (427)
T ss_dssp HHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHH
T ss_pred HHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeecc
Confidence 7651 12344455778899999999985
No 23
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.69 E-value=3.4e-16 Score=158.76 Aligned_cols=179 Identities=15% Similarity=0.166 Sum_probs=117.3
Q ss_pred CCEEEEecCCccEEEEEEECCcEEEEecCCCCcccceEEEEcC----CcEEecHHHHHhhhhCCCceecccHHhhCCCCC
Q 041815 7 APAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTD----KECFVGDAAKNQVAMNPTNTVFDAKRLIGRRFG 82 (475)
Q Consensus 7 ~~vvGIDlGTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~~----~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~ 82 (475)
...|+||+||.++++++...+.|..+ +||+|+... ...++|+++.... +.+ ..
T Consensus 23 ~~~iVID~GS~~~kaG~ag~~~P~~v--------~PSvVg~~~~~~~~~~~vG~e~~~~~---r~~--l~---------- 79 (498)
T 3qb0_A 23 VSAVVIDPGSYTTNIGYSGSDFPQSI--------LPSVYGKYTADEGNKKIFSEQSIGIP---RKD--YE---------- 79 (498)
T ss_dssp BSCEEEECCSSEEEEEETTCSSCSEE--------EESEEEEESSCSSCCEECCTTGGGSC---CTT--EE----------
T ss_pred CCeEEEECCCcEEEEEECCCCCeeee--------cCceeEEeccCCCccEEEecHHHhcC---cCc--eE----------
Confidence 35789999999999999765544443 499999853 2467887532210 000 00
Q ss_pred ChhhhhcccccCeEEEecCCCCceEEEeeCCceeeeeHHHHHHHHHHHHHHHHHhhcCC--CCC-eEEEEeCCCCCHHHH
Q 041815 83 DVSVQSDVKLWPFEVVAGPKDKPMIVVNCKGEEKRYAAEEISSMVLAKMRDIAEDYVGS--PVS-NAVVTVPAYFTDSQR 159 (475)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~l~~~~L~~l~~~a~~~~~~--~~~-~~vitVP~~~~~~~r 159 (475)
...|++ +|....| +....++.++.. ..++. ... .+++|.|+..+...|
T Consensus 80 --------l~~Pi~---------------~GvI~dw---d~~E~iw~~~f~---~~L~v~p~~~~pvlltep~~n~~~~R 130 (498)
T 3qb0_A 80 --------LKPIIE---------------NGLVIDW---DTAQEQWQWALQ---NELYLNSNSGIPALLTEPVWNSTENR 130 (498)
T ss_dssp --------EEESEE---------------TTEESCH---HHHHHHHHHHHH---HTSCCSCCTTCCEEEEECTTCCHHHH
T ss_pred --------EeccCc---------------CCEEccH---HHHHHHHHHHHH---hhhCCCcccCCceEEEeCCCCcHHHH
Confidence 011211 1222123 222333333332 12321 223 589999999999999
Q ss_pred HHHHHHH-HHcCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEEEeCCeEEEEEEcCCCCCchhHHH
Q 041815 160 QATKDAG-AMAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFD 238 (475)
Q Consensus 160 ~~l~~a~-~~agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id 238 (475)
+++.+++ +.+|++.+.++.+|.+|+++++.. +-||||+|+|+|+++.+. .|..- ........+||+++|
T Consensus 131 e~~~eilFE~f~vpav~l~~~~vlalya~G~~-------tglVVDiG~g~T~vvPI~--~G~~l-~~ai~rl~vgG~~lt 200 (498)
T 3qb0_A 131 KKSLEVLLEGMQFEACYLAPTSTCVSFAAGRP-------NCLVVDIGHDTCSVSPIV--DGMTL-SKSTRRNFIAGKFIN 200 (498)
T ss_dssp HHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCS-------SEEEEEECSSCEEEEEEE--TTEEC-GGGCEEESCSHHHHH
T ss_pred HHHHHHHHhhcCCCeEeecchHHHHHHHcCCC-------eEEEEEcCCCcEEEEEEe--CCEEc-cccceeccccHHHHH
Confidence 9998865 889999999999999999988742 359999999999999886 33221 111122589999999
Q ss_pred HHHHHHHHH
Q 041815 239 NRMVNHFIQ 247 (475)
Q Consensus 239 ~~l~~~l~~ 247 (475)
+.|.++|..
T Consensus 201 ~~L~~lL~~ 209 (498)
T 3qb0_A 201 HLIKKALEP 209 (498)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHHHHh
Confidence 999998864
No 24
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.55 E-value=6.4e-13 Score=140.14 Aligned_cols=118 Identities=14% Similarity=0.236 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHHH-HhhcCCCCC-----eEEEEeCCCCCHHHHHHHHHH-HHHcCCceeeeeechHHHHHHhhhccC
Q 041815 120 AEEISSMVLAKMRDIA-EDYVGSPVS-----NAVVTVPAYFTDSQRQATKDA-GAMAGLNVLKIISEPTAAAIAYGLDRK 192 (475)
Q Consensus 120 ~~~l~~~~L~~l~~~a-~~~~~~~~~-----~~vitVP~~~~~~~r~~l~~a-~~~agl~~~~~i~Ep~Aaa~~~~~~~~ 192 (475)
..+.+.++ +.|++++ ...|+-... .+++|.|..++...|+.|.+. .+..+++.+.++.++.+|+++++
T Consensus 170 ~~~~wdd~-e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G---- 244 (593)
T 4fo0_A 170 LTAVLADI-EVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSG---- 244 (593)
T ss_dssp HHHHHHHH-HHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHT----
T ss_pred hhcCHHHH-HHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCC----
Confidence 44555443 4444444 345654333 499999999999999988655 67789999999999999999987
Q ss_pred CCCCceEEEEEeCCCceEEEEEEEeCCeEEEEEEcCCCCCchhHHHHHHHHHHHHH
Q 041815 193 ATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQE 248 (475)
Q Consensus 193 ~~~~~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~~~l~~~ 248 (475)
..+-+|||+|++.|+++-+. +|..- ........+||+++++.|.++|..+
T Consensus 245 ---~~tglVVDiG~~~T~v~PV~--dG~~l-~~~~~rl~~GG~~lt~~L~~lL~~~ 294 (593)
T 4fo0_A 245 ---LSSTCIVDVGDQKTSVCCVE--DGVSH-RNTRLCLAYGGSDVSRCFYWLMQRA 294 (593)
T ss_dssp ---CSEEEEEEECSSCEEEEEEE--SSCBC-GGGCEEESCCHHHHHHHHHHHHHHT
T ss_pred ---CCceEEEEeCCCceeeeeeE--CCEEe-hhheEEecccHHHHHHHHHHHHHhc
Confidence 44779999999999987776 33221 1111225799999999999888653
No 25
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.51 E-value=5.3e-15 Score=146.61 Aligned_cols=196 Identities=20% Similarity=0.179 Sum_probs=137.0
Q ss_pred HHHHHHHHHHHHHc-CC--ceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEEEeCCeEEEEEEcCCCCC
Q 041815 156 DSQRQATKDAGAMA-GL--NVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHL 232 (475)
Q Consensus 156 ~~~r~~l~~a~~~a-gl--~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~~ 232 (475)
..+-+++.++.+.+ |+ ++-. .||.||+++.+.+.+. +..++++||||||||++++.-+. +.+......
T Consensus 367 ~~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE~--eLGvaiIDmGGGTTd~sVf~~G~-----lv~a~~ip~ 437 (610)
T 2d0o_A 367 RLQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPGT--TRPLAILDLGAGSTDASIINPKG-----DIIATHLAG 437 (610)
T ss_dssp CCCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTTC--CSSEEEEEECSSEEEEEEECTTC-----CEEEEEEEC
T ss_pred HHHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCCC--cCCeEEEEeCCCcceEEEEcCCc-----EEEEEEecc
Confidence 44578899999999 99 5555 9999999999988766 78999999999999999998666 444555789
Q ss_pred chhHHHHHHHHHHHHH-HHhhccCCCCCCHHHHHHHHHHHHHHHHHhcCC----------ceeEEEE--eccccC---c-
Q 041815 233 GGEDFDNRMVNHFIQE-FKRKTEKDISGSPRAVQRLRKDCERAKRILSST----------SQTTIEI--DSLYEG---I- 295 (475)
Q Consensus 233 GG~~id~~l~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~----------~~~~~~i--~~~~~~---~- 295 (475)
||++++..|..-|.-. + ..||+.|. .... +...+.+ +.+... .
T Consensus 438 gG~~VT~DIA~~Lgt~d~-------------------~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~~Rv 497 (610)
T 2d0o_A 438 AGDMVTMIIARELGLEDR-------------------YLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVFARV 497 (610)
T ss_dssp SHHHHHHHHHHHHTCCCH-------------------HHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCE
T ss_pred chHHHHHHHHHHhCCCCH-------------------HHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeee
Confidence 9999999998877432 2 27888888 4321 1223455 333211 0
Q ss_pred -----cceEEEcHHH--HHHHHHHHHHHHHHH--HHHHHHhCCC-----CCCCCCeEEEecCCCCcHHHHHHHHHHcCCc
Q 041815 296 -----DFSSVMTRAR--FEELNMDLFRKCIKH--VDMCLRTGKT-----DNSSVDDVVIVGGSARIPKVQQLLQEFFNGK 361 (475)
Q Consensus 296 -----~~~~~itr~~--~~~~~~~~~~~i~~~--i~~~l~~~~~-----~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~ 361 (475)
..-..| +.. +|+ ++-+-+++.+. +.++|+..+. ...+|..|+|+||+|.++.+.+..++.|..-
T Consensus 498 ~~~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y 575 (610)
T 2d0o_A 498 CVVKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHY 575 (610)
T ss_dssp EEECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTS
T ss_pred ecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCcC
Confidence 111244 455 666 55555554443 2333554322 2346799999999999999999999999531
Q ss_pred cc-------ccCCCCcchhhchHHHHHH
Q 041815 362 RL-------CKNINPDEAVAYGAAVQAA 382 (475)
Q Consensus 362 ~v-------~~~~~p~~ava~Gaa~~a~ 382 (475)
++ ....+|..|+|.|.+++-+
T Consensus 576 ~VRiGrP~~~gv~gP~fAtAvGLlly~~ 603 (610)
T 2d0o_A 576 RLVAGRGNIRGSEGPRNAVATGLILSWH 603 (610)
T ss_dssp SCEEEECCGGGTSTTSCHHHHHHHHHHH
T ss_pred CeEEecCCccccCCCcHHHHHHHHHHHh
Confidence 22 2244999999999998754
No 26
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.49 E-value=6.1e-15 Score=146.73 Aligned_cols=194 Identities=21% Similarity=0.171 Sum_probs=136.5
Q ss_pred HHHHHHHHHHHHc-CC--ceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEEEeCCeEEEEEEcCCCCCc
Q 041815 157 SQRQATKDAGAMA-GL--NVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLG 233 (475)
Q Consensus 157 ~~r~~l~~a~~~a-gl--~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~~G 233 (475)
.+-+.+.++.+.+ |+ ++-. .||.||+++.+.+.+. +..++++||||||||++++.-+. +.+......|
T Consensus 370 ~~m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE~--elGvaiIDmGgGTTd~sVf~~g~-----lv~a~~ip~g 440 (607)
T 1nbw_A 370 LQMQVIARELSARLQTEVVVGG--VEANMAIAGALTTPGC--AAPLAILDLGAGSTDAAIVNAEG-----QITAVHLAGA 440 (607)
T ss_dssp CCSCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTTC--CSSEEEEEECSSEEEEEEECSSS-----CEEEEEEECC
T ss_pred HHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCCC--cCCeEEEEeCCCcceEEEEcCCc-----EEEEEEeccc
Confidence 3457888999999 99 5545 9999999999988766 78999999999999999998766 4445557899
Q ss_pred hhHHHHHHHHHHHHH-HHhhccCCCCCCHHHHHHHHHHHHHHHHHhcCC----------ceeEEEE--eccccC---c--
Q 041815 234 GEDFDNRMVNHFIQE-FKRKTEKDISGSPRAVQRLRKDCERAKRILSST----------SQTTIEI--DSLYEG---I-- 295 (475)
Q Consensus 234 G~~id~~l~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~----------~~~~~~i--~~~~~~---~-- 295 (475)
|++++..|..-|.-. + ..||+.|. .... +...+.+ +.+... .
T Consensus 441 G~~VT~DIA~~Lg~~d~-------------------~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~~R~~ 500 (607)
T 1nbw_A 441 GNMVSLLIKTELGLEDL-------------------SLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVFAKVV 500 (607)
T ss_dssp HHHHHHHHHHHHTCSCH-------------------HHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCEE
T ss_pred hHHHHHHHHHHhCCCCH-------------------HHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeeee
Confidence 999999998877433 2 27888888 4321 1223445 333211 0
Q ss_pred ----cceEEEcHHH--HHHHHHHHHHHHHHH--HHHHHHhCCCC-----CCCCCeEEEecCCCCcHHHHHHHHHHcCCcc
Q 041815 296 ----DFSSVMTRAR--FEELNMDLFRKCIKH--VDMCLRTGKTD-----NSSVDDVVIVGGSARIPKVQQLLQEFFNGKR 362 (475)
Q Consensus 296 ----~~~~~itr~~--~~~~~~~~~~~i~~~--i~~~l~~~~~~-----~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~ 362 (475)
..-..| +.. +|+ ++-+-+++.+. +..+|+..+.. ..+|..|+|+||+|.++.+.+..++.|+.-+
T Consensus 501 ~~~~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~ 578 (607)
T 1nbw_A 501 YIKEGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYG 578 (607)
T ss_dssp EEETTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTT
T ss_pred cccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCC
Confidence 111244 455 666 55555554443 44457665442 3457999999999999999999999994312
Q ss_pred c-------ccCCCCcchhhchHHHHH
Q 041815 363 L-------CKNINPDEAVAYGAAVQA 381 (475)
Q Consensus 363 v-------~~~~~p~~ava~Gaa~~a 381 (475)
+ ....+|..|+|.|++++-
T Consensus 579 VRiGrP~~~g~~gP~fAtAvGLlly~ 604 (607)
T 1nbw_A 579 VVAGQGNIRGTEGPRNAVATGLLLAG 604 (607)
T ss_dssp CEEEECCGGGTSCSCCHHHHHHHHHH
T ss_pred eEEecCCccccCCchHHHHHHHHHhh
Confidence 2 224499999999999864
No 27
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=99.33 E-value=2.8e-13 Score=103.83 Aligned_cols=55 Identities=27% Similarity=0.700 Sum_probs=50.4
Q ss_pred cCCCCCCCCCccccccceeccCcccccccccCCCCCCceeecccCCCCCCcCCCCC
Q 041815 419 QNLPSRGGHKSHQAHDLQLKNHKTLSKCNGCKRPAFGLMYRCELCNFNLHIPCMFI 474 (475)
Q Consensus 419 ~~~~~~~~~~~~~~h~l~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (475)
.++|.++.|..|+.|+|++.... +|.||+|++.+.+|.|+|..|||+||..||+.
T Consensus 24 a~lP~~i~Hp~Hp~H~L~L~~~~-~~~C~~C~~~~~~~~Y~C~~C~f~lH~~Ca~~ 78 (89)
T 1v5n_A 24 KDWPKKVKHVLHEEHELELTRVQ-VYTCDKCEEEGTIWSYHCDECDFDLHAKCALN 78 (89)
T ss_dssp SSSCSEECCSTTTTSCEEEECCS-SCCCTTTSCCCCSCEEECTTTCCCCCHHHHHC
T ss_pred HcCCceecCCCCCCCccEEeeCC-CeEeCCCCCcCCCcEEEcCCCCCeEcHHhcCC
Confidence 45688899999999999998766 69999999999999999999999999999974
No 28
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=99.06 E-value=4.5e-09 Score=99.00 Aligned_cols=172 Identities=20% Similarity=0.196 Sum_probs=98.9
Q ss_pred eeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEEEeCCeEEEEEEcCCCCCchhHHHHHHHHHHHHHHHhh
Q 041815 173 VLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRK 252 (475)
Q Consensus 173 ~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~~l~~~l~~~~~~~ 252 (475)
...+++|.+|.+.+...-... .. .|+|+||+++.+..+ .++.+...........|... +.+++...+.
T Consensus 76 ~~~~v~Ei~ah~~ga~~~~~~--~~--~vidiGGqd~k~i~~--~~g~v~~~~mn~~ca~GtG~----~le~~a~~lg-- 143 (270)
T 1hux_A 76 ADKQMSELSCHAMGASFIWPN--VH--TVIDIGGQDVKVIHV--ENGTMTNFQMNDKCAAGTGR----FLDVMANILE-- 143 (270)
T ss_dssp CSEEECHHHHHHHHHHHHCTT--CC--EEEEEETTEEEEEEE--ETTEEEEEEEESSCCTTSHH----HHHHHHHHHT--
T ss_pred CCCCcccHHHHHHHHHHhCCC--CC--EEEEECCCceEEEEE--eCCceeeeccccccchhhHH----HHHHHHHHhC--
Confidence 346799999998665333222 22 589999998887666 56655434444433444433 3444444442
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHHHHhcCCceeEEEEeccccCccceEEEcHHHH----------HHHHHHHHHHHHHHHH
Q 041815 253 TEKDISGSPRAVQRLRKDCERAKRILSSTSQTTIEIDSLYEGIDFSSVMTRARF----------EELNMDLFRKCIKHVD 322 (475)
Q Consensus 253 ~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~----------~~~~~~~~~~i~~~i~ 322 (475)
.++. ++++.... ... ++.+ +.. ...+.+.++ +++++.+++.+...+.
T Consensus 144 --~~~~-----------el~~la~~--~~~--p~~~-----~~~-c~vfa~s~v~~l~~~g~~~~di~~av~e~Va~~i~ 200 (270)
T 1hux_A 144 --VKVS-----------DLAELGAK--STK--RVAI-----SST-CTVFAESEVISQLSKGTDKIDIIAGIHRSVASRVI 200 (270)
T ss_dssp --CCTT-----------THHHHHTT--CCS--CCCC-----CCC-SHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred --CCHH-----------HHHHHHhh--CCC--CCCc-----ccc-cchhHhHHHHHHhhCCCCHHHHHHHHHHHHHHHHH
Confidence 1111 11111111 000 0000 000 001112222 3444445555544445
Q ss_pred HHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHHHHHH
Q 041815 323 MCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVL 384 (475)
Q Consensus 323 ~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~~ 384 (475)
+.++..+. .+.|+++||.+++|.+++.+++.+ +.++..+.+|+.+.|+|||++|...
T Consensus 201 ~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~l-g~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 201 GLANRVGI----VKDVVMTGGVAQNYGVRGALEEGL-GVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHH-CSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHhcCCC----CCeEEEeCccccCHHHHHHHHHHH-CCCeEeCCCcchHhHHHHHHHHHHh
Confidence 55554321 368999999999999999999999 7888888888889999999998754
No 29
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=98.71 E-value=1.4e-06 Score=81.79 Aligned_cols=76 Identities=13% Similarity=0.046 Sum_probs=55.6
Q ss_pred EcHHHHHH-HHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecC-CCCcHHHHHHHHHHc--CCcccccCCCCcchhhch
Q 041815 301 MTRARFEE-LNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGG-SARIPKVQQLLQEFF--NGKRLCKNINPDEAVAYG 376 (475)
Q Consensus 301 itr~~~~~-~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG-~s~~p~v~~~l~~~~--~~~~v~~~~~p~~ava~G 376 (475)
.+++++.. ++..+.++|..+.....+..+ ++.|+++|| .+..|.+++.+++.+ .+.++..+.+|+.+.|+|
T Consensus 207 ~~~eDIaasl~~sV~~~I~~la~~~a~~~~-----i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlG 281 (287)
T 2ews_A 207 FTPSNKLAAVIGVVGEVVTTMAITVAREFK-----TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIG 281 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHH
Confidence 45665543 444444555444444444433 457999999 899999999999974 477899999999999999
Q ss_pred HHHHH
Q 041815 377 AAVQA 381 (475)
Q Consensus 377 aa~~a 381 (475)
||+.+
T Consensus 282 AaL~~ 286 (287)
T 2ews_A 282 ALYLE 286 (287)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99874
No 30
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=98.27 E-value=3.3e-06 Score=86.75 Aligned_cols=96 Identities=17% Similarity=0.313 Sum_probs=76.9
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHH-HHcCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEEEeCCeEE
Q 041815 144 SNAVVTVPAYFTDSQRQATKDAG-AMAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFK 222 (475)
Q Consensus 144 ~~~vitVP~~~~~~~r~~l~~a~-~~agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~~~~~~~~ 222 (475)
..+++|.|+.++...|+.+.+++ +..|++.+.++.+|.+|+++++. ..+-+|||+|+|+|+++.+. .|..
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl------~ttGLVVDiG~g~T~VvPV~--eG~v- 292 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI------STSTCVVNIGAAETRIACVD--EGTV- 292 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC------SSCEEEEEECSSCEEEEEEE--TTEE-
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC------CCceEEEcCCCceEEEEEEe--CCEE-
Confidence 46999999999999999998876 57999999999999999998764 24679999999999998875 3321
Q ss_pred EEEEcCCCCCchhHHHHHHHHHHHHH
Q 041815 223 VKATAGDTHLGGEDFDNRMVNHFIQE 248 (475)
Q Consensus 223 v~~~~~~~~~GG~~id~~l~~~l~~~ 248 (475)
+........+||+++|+.|.++|..+
T Consensus 293 l~~ai~rL~iGG~dLT~yL~kLL~~r 318 (655)
T 4am6_A 293 LEHSAITLDYGGDDITRLFALFLLQS 318 (655)
T ss_dssp CGGGCEEESCCHHHHHHHHHHHHHHT
T ss_pred EhhheeeecchHHHHHHHHHHHHHHc
Confidence 01111226899999999999988764
No 31
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=97.71 E-value=0.0035 Score=59.89 Aligned_cols=77 Identities=17% Similarity=0.245 Sum_probs=49.7
Q ss_pred HHHHHHHHHcCCceeeeeechHHHHHHhhhccCCC-CCceEEEEEeCCCceEEEEEEEeCCeEEEEEEcCCCCCchhHHH
Q 041815 160 QATKDAGAMAGLNVLKIISEPTAAAIAYGLDRKAT-SEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFD 238 (475)
Q Consensus 160 ~~l~~a~~~agl~~~~~i~Ep~Aaa~~~~~~~~~~-~~~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id 238 (475)
+.+..+-+..|++.-.+-.|-+|...+.+...... .....+|+|+|||+|.+++++-.+ +....+.++|.-.+.
T Consensus 93 ~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~-----~~~~~Sl~lG~vrl~ 167 (315)
T 3mdq_A 93 VLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNKNE-----ILWKQSFEIGGQRLI 167 (315)
T ss_dssp HHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECSSC-----EEEEEEESCCHHHHH
T ss_pred HHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEECCe-----EeeeEEEechhhHHH
Confidence 34455566679987555556666554444432222 246799999999999999987332 222334789988776
Q ss_pred HHH
Q 041815 239 NRM 241 (475)
Q Consensus 239 ~~l 241 (475)
+.+
T Consensus 168 e~f 170 (315)
T 3mdq_A 168 DRF 170 (315)
T ss_dssp HHS
T ss_pred HHh
Confidence 654
No 32
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=97.66 E-value=0.041 Score=51.90 Aligned_cols=49 Identities=14% Similarity=0.271 Sum_probs=37.8
Q ss_pred CCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHHHHH
Q 041815 334 SVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAV 383 (475)
Q Consensus 334 ~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ 383 (475)
+++.|+|.||.+..+.+.+.+++.++..++..+. .+.+.++||+.++..
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYK 287 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHH
Confidence 3578999999987788888888887544566555 667889999988754
No 33
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=97.58 E-value=0.00028 Score=67.46 Aligned_cols=77 Identities=16% Similarity=0.126 Sum_probs=51.5
Q ss_pred HHHHHHHHHcCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEEEeCCeEEEEEEcCCCCCchhHHHH
Q 041815 160 QATKDAGAMAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFDN 239 (475)
Q Consensus 160 ~~l~~a~~~agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~ 239 (475)
+.+..+-+..|++.-.+-.|.+|...+.+...........+|+|+|||+|.+++++ ++.+ ....+.++|+..+.+
T Consensus 101 ~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~--~~~~---~~~~Sl~~G~v~l~e 175 (315)
T 1t6c_A 101 EFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGK--GYKV---REVISLPIGIVNLTE 175 (315)
T ss_dssp HHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEE--TTEE---EEEEEECCCHHHHHH
T ss_pred HHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEe--CCce---eeEEEEeccHHHHHH
Confidence 44555555789987666667777655544332221245799999999999999876 3333 223347899998887
Q ss_pred HH
Q 041815 240 RM 241 (475)
Q Consensus 240 ~l 241 (475)
.+
T Consensus 176 ~~ 177 (315)
T 1t6c_A 176 TF 177 (315)
T ss_dssp HH
T ss_pred Hh
Confidence 75
No 34
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=97.56 E-value=0.00022 Score=68.77 Aligned_cols=47 Identities=21% Similarity=0.072 Sum_probs=41.3
Q ss_pred CCeEEEecC-CCCcHHHHHHHHHHc-----CCcccccCCCCcchhhchHHHHH
Q 041815 335 VDDVVIVGG-SARIPKVQQLLQEFF-----NGKRLCKNINPDEAVAYGAAVQA 381 (475)
Q Consensus 335 i~~VvLvGG-~s~~p~v~~~l~~~~-----~~~~v~~~~~p~~ava~Gaa~~a 381 (475)
++.|+++|| .+..|.+++.|++.+ ++.++..+.+|+.+-|+||++.+
T Consensus 306 i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 306 IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHH
T ss_pred CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHHHHHHh
Confidence 457999999 899999999999986 24678888899999999999975
No 35
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=97.47 E-value=0.046 Score=52.46 Aligned_cols=68 Identities=18% Similarity=0.263 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcC--CcccccCC---CCcchhhchHHHHHHHHcC
Q 041815 314 FRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFN--GKRLCKNI---NPDEAVAYGAAVQAAVLSG 386 (475)
Q Consensus 314 ~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~--~~~v~~~~---~p~~ava~Gaa~~a~~~~~ 386 (475)
.+.+.+.++++.+.. .++.|+|+||.+....+++.|.+.+. +.++..+. -.|.++++|++.+.....|
T Consensus 229 ~~~l~~~~~~~~~~~-----~~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~~ 301 (330)
T 2ivn_A 229 FAALVEVTERAVAHT-----EKDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYKAG 301 (330)
T ss_dssp HHHHHHHHHHHHHHH-----CCSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHh-----CCCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHHhcC
Confidence 334445555555542 25699999999999999999998762 44555554 2367888998876554444
No 36
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=97.42 E-value=0.077 Score=50.58 Aligned_cols=45 Identities=20% Similarity=0.270 Sum_probs=31.5
Q ss_pred cCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEE
Q 041815 169 AGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLT 215 (475)
Q Consensus 169 agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~ 215 (475)
.|++ +.+.++..|+|++-...........++++-+|.| .-..++.
T Consensus 96 ~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~ 140 (321)
T 3vgl_A 96 VGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGIII 140 (321)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEE
T ss_pred hCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEEE
Confidence 4775 7899999999998655433323567888899988 4555554
No 37
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=97.42 E-value=0.034 Score=53.08 Aligned_cols=47 Identities=17% Similarity=0.194 Sum_probs=33.1
Q ss_pred CCeEEEecCCCCc-HHHHHHHHHHc---------CCcccccCCCCcchhhchHHHHH
Q 041815 335 VDDVVIVGGSARI-PKVQQLLQEFF---------NGKRLCKNINPDEAVAYGAAVQA 381 (475)
Q Consensus 335 i~~VvLvGG~s~~-p~v~~~l~~~~---------~~~~v~~~~~p~~ava~Gaa~~a 381 (475)
++.|+|.||.++. +.+.+.|++.+ ...++....-.+.+.++|||.++
T Consensus 261 P~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~ 317 (321)
T 3r8e_A 261 LNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLI 317 (321)
T ss_dssp CCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHH
T ss_pred CCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHH
Confidence 5789999999876 56655555543 12355555566789999999876
No 38
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=97.37 E-value=0.11 Score=49.93 Aligned_cols=82 Identities=6% Similarity=0.028 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHHHHhh-c-CC-CCCeEEEEeCCCCCHHHHHHHHHHHHHc-C--CceeeeeechHHHHHHhhhccCC
Q 041815 120 AEEISSMVLAKMRDIAEDY-V-GS-PVSNAVVTVPAYFTDSQRQATKDAGAMA-G--LNVLKIISEPTAAAIAYGLDRKA 193 (475)
Q Consensus 120 ~~~l~~~~L~~l~~~a~~~-~-~~-~~~~~vitVP~~~~~~~r~~l~~a~~~a-g--l~~~~~i~Ep~Aaa~~~~~~~~~ 193 (475)
+++++..+.+.+.+..++. . .. .+..+.|++|...+......+++..+.. + ...+.+.++..|+|+++ .
T Consensus 45 ~~~~~~~i~~~i~~~~~~~~~~~~~~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~-~---- 119 (347)
T 2ch5_A 45 TDKCVERINEMVNRAKRKAGVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA-T---- 119 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH-C----
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcccceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh-C----
Confidence 3444444444444433322 1 12 4677999999988877655666665543 3 13578999999999984 2
Q ss_pred CCCceEEEEEeCCCc
Q 041815 194 TSEKNVLIFDLGGGT 208 (475)
Q Consensus 194 ~~~~~vlvvD~Gggt 208 (475)
....+++=+|.|.
T Consensus 120 --~~~~v~v~~GTGi 132 (347)
T 2ch5_A 120 --PDGGVVLISGTGS 132 (347)
T ss_dssp --SSCEEEEEESSSE
T ss_pred --CCCcEEEEEcCCc
Confidence 1345566667664
No 39
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=97.32 E-value=0.019 Score=55.05 Aligned_cols=46 Identities=24% Similarity=0.338 Sum_probs=31.6
Q ss_pred HcCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEE
Q 041815 168 MAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLT 215 (475)
Q Consensus 168 ~agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~ 215 (475)
..|++ +.+.++..|+|++-.........+.++++-+|.| .-.+++.
T Consensus 119 ~~~~p-V~v~NDa~aaalgE~~~g~~~~~~~~~~l~~GtG-iG~gii~ 164 (327)
T 4db3_A 119 KIGRS-VKIENDANCFALSEAWDEELQDAPSVMGLILGTG-FGGGLIY 164 (327)
T ss_dssp HHSSC-CEEEEHHHHHHHHHHTSTTTTTCSEEEEEEESSS-EEEEEEE
T ss_pred HHCCC-EEEecchhHHHHHHHHhCCCCCCCcEEEEEeCcc-ceEEEEE
Confidence 34775 7899999999998755433333577888888877 4444443
No 40
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=97.21 E-value=0.022 Score=53.88 Aligned_cols=45 Identities=20% Similarity=0.222 Sum_probs=30.2
Q ss_pred HcCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEE
Q 041815 168 MAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLL 214 (475)
Q Consensus 168 ~agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~ 214 (475)
..|++ +.+.++..|+|++-.........++++++-+|.| .-..++
T Consensus 97 ~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii 141 (302)
T 3vov_A 97 ATGRP-VFLENDANAAALAEHHLGAAQGEESSLYLTVSTG-IGGGVV 141 (302)
T ss_dssp HHSSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred hhCCC-EEEEechHHHHHHHHHhCCCCCCCCEEEEEECCc-eeEEEE
Confidence 34665 6899999999988655433333567888888877 334444
No 41
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=97.12 E-value=0.00087 Score=69.51 Aligned_cols=86 Identities=16% Similarity=0.173 Sum_probs=62.3
Q ss_pred EEcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHH
Q 041815 300 VMTRARFEELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAV 379 (475)
Q Consensus 300 ~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~ 379 (475)
.-++.++..+++.+++.+.-.++..++........++.|.++||+++++.+.+.+.+.+ +.+|..+ ...++.|+|||+
T Consensus 408 ~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~aks~~~~Qi~ADv~-g~pV~~~-~~~e~~alGAA~ 485 (554)
T 3l0q_A 408 STTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANAT-GCAMLLP-EESEAMLLGSAM 485 (554)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHHHHHHHHHHH-CCEEEEE-SCSCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccCHHHHHHHHHhh-CCeEEec-CCCcchHHHHHH
Confidence 44788875445555555544444433321112234789999999999999999999999 8888776 456799999999
Q ss_pred HHHHHcCC
Q 041815 380 QAAVLSGN 387 (475)
Q Consensus 380 ~a~~~~~~ 387 (475)
.|+.-.|.
T Consensus 486 lA~~a~G~ 493 (554)
T 3l0q_A 486 MGTVAAGV 493 (554)
T ss_dssp HHHHHTTS
T ss_pred HHHHHcCC
Confidence 99988774
No 42
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=97.08 E-value=0.0038 Score=60.27 Aligned_cols=79 Identities=16% Similarity=0.172 Sum_probs=48.6
Q ss_pred HHHHHHHHHcCCceeeeeechHHHHHHhhhccCCC---CCceEEEEEeCCCceEEEEEEE--eC--CeEEEEEEcCCCCC
Q 041815 160 QATKDAGAMAGLNVLKIISEPTAAAIAYGLDRKAT---SEKNVLIFDLGGGTFDVSLLTI--EK--GIFKVKATAGDTHL 232 (475)
Q Consensus 160 ~~l~~a~~~agl~~~~~i~Ep~Aaa~~~~~~~~~~---~~~~vlvvD~Gggt~dvsv~~~--~~--~~~~v~~~~~~~~~ 232 (475)
+.+..+-+..|++.-.+-.|-+|...+.+...... .....+|+|+|||+|+++++.- .. +.+ ....+.++
T Consensus 106 ~fl~~v~~~tGi~ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~---~~~~Slpl 182 (343)
T 3cer_A 106 EFEDEIERILGVRPEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQV---QGAFSMNI 182 (343)
T ss_dssp HHHHHHHHHHSSCCEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSC---SEEEEESC
T ss_pred HHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCccccc---ceeEEEeh
Confidence 44555556679987444445555444444422221 2356999999999999998864 22 111 11334689
Q ss_pred chhHHHHHH
Q 041815 233 GGEDFDNRM 241 (475)
Q Consensus 233 GG~~id~~l 241 (475)
|+..+.+.+
T Consensus 183 G~v~lt~~~ 191 (343)
T 3cer_A 183 GSVRMTERH 191 (343)
T ss_dssp CHHHHHHHT
T ss_pred hHHHHHHHh
Confidence 999988775
No 43
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=97.02 E-value=0.027 Score=53.79 Aligned_cols=45 Identities=16% Similarity=0.341 Sum_probs=30.5
Q ss_pred cCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEE
Q 041815 169 AGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLT 215 (475)
Q Consensus 169 agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~ 215 (475)
.+++ +.+.++..|+|++-...........++++-+|.| .-..++.
T Consensus 108 ~~~p-v~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtG-iG~giv~ 152 (326)
T 2qm1_A 108 LGIP-FALDNDANVAALGERWKGAGENNPDVIFITLGTG-VGGGIVA 152 (326)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEE
T ss_pred hCCC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEE
Confidence 3665 6899999999987544332222567888899988 4455553
No 44
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=96.95 E-value=0.09 Score=49.28 Aligned_cols=49 Identities=16% Similarity=0.122 Sum_probs=32.9
Q ss_pred CCeEEEecCCCCcHHHHHHHHHHcC-----------CcccccCCCCcchhhchHHHHHHH
Q 041815 335 VDDVVIVGGSARIPKVQQLLQEFFN-----------GKRLCKNINPDEAVAYGAAVQAAV 383 (475)
Q Consensus 335 i~~VvLvGG~s~~p~v~~~l~~~~~-----------~~~v~~~~~p~~ava~Gaa~~a~~ 383 (475)
++.|+|.||.+..+.+.+.+++.+. ..++....-.+.+.++||+.++..
T Consensus 228 p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 228 PGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQ 287 (292)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred CCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHH
Confidence 5789999998877777666665541 123343334567889999988654
No 45
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=96.95 E-value=0.0013 Score=67.03 Aligned_cols=82 Identities=18% Similarity=0.178 Sum_probs=57.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHHH
Q 041815 302 TRARFEELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQA 381 (475)
Q Consensus 302 tr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a 381 (475)
++.++ ++.+++.+.-.++..++........++.|.++||+++++.+.+.+.+.+ +.+|..+..++.+.|+|||+.|
T Consensus 357 ~~~~~---~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~~~~e~~~alGAA~lA 432 (484)
T 2itm_A 357 GPNEL---ARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADIS-GQQLDYRTGGDVGPALGAARLA 432 (484)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTTCCCSCEEEESGGGCCHHHHHHHHHHH-CCCEEEESCTTSCHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEeccccCHHHHHHHHHHh-CCeEEeCCCCCcccHHHHHHHH
Confidence 45554 3444444433333333322111234688999999999999999999999 8888887665556899999999
Q ss_pred HHHcCC
Q 041815 382 AVLSGN 387 (475)
Q Consensus 382 ~~~~~~ 387 (475)
+.-.|.
T Consensus 433 ~~~~g~ 438 (484)
T 2itm_A 433 QIAANP 438 (484)
T ss_dssp HHHHCT
T ss_pred HHHcCC
Confidence 887773
No 46
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=96.94 E-value=0.048 Score=51.40 Aligned_cols=49 Identities=16% Similarity=0.184 Sum_probs=35.9
Q ss_pred CCeEEEecCCCCcHHHHHHHHHHcCC-----cccccCCCCcchhhchHHHHHHH
Q 041815 335 VDDVVIVGGSARIPKVQQLLQEFFNG-----KRLCKNINPDEAVAYGAAVQAAV 383 (475)
Q Consensus 335 i~~VvLvGG~s~~p~v~~~l~~~~~~-----~~v~~~~~p~~ava~Gaa~~a~~ 383 (475)
++.|+|.||.+..+.+.+.|++.+.. .++....-.+.+.++||+.++..
T Consensus 238 p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 238 PTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp CSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHH
Confidence 57899999999877777777776631 23444545677999999988754
No 47
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=96.91 E-value=0.0016 Score=67.12 Aligned_cols=78 Identities=13% Similarity=0.089 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHHHHHHcC
Q 041815 307 EELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSG 386 (475)
Q Consensus 307 ~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~~ 386 (475)
.++++.+++.+.-.++..++..+.....++.|.++||+++++.+.+.+.+.+ +.+|..+ .+.|+.|+|||+.|+.-.|
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G 484 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVF-DAPVYVI-DTANSACVGSAYRAFHGLA 484 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHH-TSCEEEC-CCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHh-CCceEec-CCCCchHHHHHHHHHHHhC
Confidence 4455556666655566666665444455789999999999999999999999 7888776 5678999999999987766
No 48
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=96.91 E-value=0.0015 Score=66.80 Aligned_cols=78 Identities=14% Similarity=0.102 Sum_probs=57.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHH---HHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHH
Q 041815 302 TRARFEELNMDLFRKCIKHVDM---CLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAA 378 (475)
Q Consensus 302 tr~~~~~~~~~~~~~i~~~i~~---~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa 378 (475)
++.++ ++.+++.+.-.++. .|++.+ ..++.|.++||+++++.+.+.+.+.+ +.+|..+ .+.|+.|+|||
T Consensus 364 ~~~~l---~RAvlEgia~~~r~~~~~l~~~g---~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA 435 (504)
T 3ll3_A 364 QKPEM---ARAVIEGIIFNLYDAASNLIKNT---KKPVAINATGGFLKSDFVRQLCANIF-NVPIVTM-KEQQSGTLAAM 435 (504)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTS---CCCSEEEEESGGGCSHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcC---CCCCEEEEeCchhcCHHHHHHHHHhh-CCeEEec-CCCCchhHHHH
Confidence 55554 34444444333333 334433 25789999999999999999999999 8888775 46779999999
Q ss_pred HHHHHHcCC
Q 041815 379 VQAAVLSGN 387 (475)
Q Consensus 379 ~~a~~~~~~ 387 (475)
+.|+.-.|.
T Consensus 436 ~lA~~a~G~ 444 (504)
T 3ll3_A 436 FLARQALGL 444 (504)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHcCc
Confidence 999987774
No 49
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=96.86 E-value=0.0019 Score=65.95 Aligned_cols=80 Identities=13% Similarity=0.140 Sum_probs=58.6
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHHH
Q 041815 302 TRARFEELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQA 381 (475)
Q Consensus 302 tr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a 381 (475)
++.++ ++.+++.+.-.++..++...... .++.|.++||+++++.+.+.+.+.+ +.++..+ .+.++.|+|||+.|
T Consensus 365 ~~~~l---~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~lA 438 (497)
T 2zf5_O 365 GREHL---ARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADIL-NRKVIRP-VVKETTALGAAYLA 438 (497)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhc-CCeEEEc-CCCcchHHHHHHHH
Confidence 45443 44455555555555555432222 5789999999999999999999999 7888766 44669999999999
Q ss_pred HHHcCC
Q 041815 382 AVLSGN 387 (475)
Q Consensus 382 ~~~~~~ 387 (475)
+.-.|.
T Consensus 439 ~~~~g~ 444 (497)
T 2zf5_O 439 GLAVDY 444 (497)
T ss_dssp HHHTTS
T ss_pred HHHhCc
Confidence 887773
No 50
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=96.80 E-value=0.002 Score=66.08 Aligned_cols=79 Identities=22% Similarity=0.212 Sum_probs=58.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCccc-ccCCCCcchhhchHHHH
Q 041815 302 TRARFEELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRL-CKNINPDEAVAYGAAVQ 380 (475)
Q Consensus 302 tr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v-~~~~~p~~ava~Gaa~~ 380 (475)
++.++ ++.+++.+.-.++..++.... .. ++.|.++||+++++.+.+.+.+.+ +.+| ..+ .+.|+.|+|||+.
T Consensus 375 ~~~~l---~RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~-~~~e~~alGaA~l 447 (511)
T 3hz6_A 375 TRAQI---LLAVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNL-NVSLLVKP-DAHLHPLRGLAAL 447 (511)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHH-TCEEEECC-CGGGHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHH-CCeeEEec-CCCCchHHHHHHH
Confidence 56554 444455544444444443222 23 789999999999999999999999 8888 665 5889999999999
Q ss_pred HHHHcCC
Q 041815 381 AAVLSGN 387 (475)
Q Consensus 381 a~~~~~~ 387 (475)
|+.-.|.
T Consensus 448 A~~a~G~ 454 (511)
T 3hz6_A 448 AAVELEW 454 (511)
T ss_dssp HHHHTTS
T ss_pred HHHHhCC
Confidence 9988774
No 51
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=96.77 E-value=0.25 Score=47.28 Aligned_cols=70 Identities=17% Similarity=0.254 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcC--CcccccCCC---CcchhhchHHHHHHHHcCC
Q 041815 313 LFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFN--GKRLCKNIN---PDEAVAYGAAVQAAVLSGN 387 (475)
Q Consensus 313 ~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~--~~~v~~~~~---p~~ava~Gaa~~a~~~~~~ 387 (475)
+.+.+.+.++++++..+ ++.|+|+||.+....+++.+.+.+. +.++..+.. .|.++++|++.+-....|.
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g~ 307 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSGV 307 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcCC
Confidence 34445566666666543 5799999999999999999998773 445555443 4788999998776655663
No 52
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=96.77 E-value=0.0014 Score=67.21 Aligned_cols=52 Identities=31% Similarity=0.488 Sum_probs=45.5
Q ss_pred CCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHHHHHHcCC
Q 041815 334 SVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGN 387 (475)
Q Consensus 334 ~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~~~ 387 (475)
.++.|.++||+++++.+.+.+.+.+ +.+|..+ .+.|+.|+|||+.|+.-.|.
T Consensus 424 ~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA~lA~~a~G~ 475 (515)
T 3i8b_A 424 SITRILLIGGGAKSEAIRTLAPSIL-GMDVTRP-ATDEYVAIGAARQAAWVLSG 475 (515)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-CCCCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECchhcCHHHHHHHHHHh-CCceEec-CCcccHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999 7888775 46778999999999887774
No 53
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=96.76 E-value=0.0083 Score=61.32 Aligned_cols=77 Identities=17% Similarity=0.210 Sum_probs=47.3
Q ss_pred HHHHHHHHHcCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEEEeCCeEEEEEEcCCCCCchhHHHH
Q 041815 160 QATKDAGAMAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFDN 239 (475)
Q Consensus 160 ~~l~~a~~~agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id~ 239 (475)
+.+..+-+..|++.-.+-.|-+|...+.+...........+|+|+|||+|.+++.+ ++.+ ....+.++|.-.+.+
T Consensus 100 ~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~--~~~~---~~~~Sl~lG~vrlte 174 (513)
T 1u6z_A 100 DFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGE--NFEP---ILVESRRMGCVSFAQ 174 (513)
T ss_dssp HHHHHHTTTCSSCEEECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEE--TTEE---EEEEEESCCHHHHHH
T ss_pred HHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEe--CCee---eEEEEEeccHHHHHH
Confidence 34444445568877444445555444444433222123799999999999999875 3333 223347899988877
Q ss_pred HH
Q 041815 240 RM 241 (475)
Q Consensus 240 ~l 241 (475)
.+
T Consensus 175 ~f 176 (513)
T 1u6z_A 175 LY 176 (513)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 54
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=96.70 E-value=0.0021 Score=65.80 Aligned_cols=81 Identities=16% Similarity=0.204 Sum_probs=56.9
Q ss_pred cHHHHH-HHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHH
Q 041815 302 TRARFE-ELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQ 380 (475)
Q Consensus 302 tr~~~~-~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~ 380 (475)
++.++- .+++-+.-.+...++..-+..+. .++.|.++||+++++.+.+.+.+.+ +.+|..+ .+.|+.|+|||+.
T Consensus 374 ~~~~l~RAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~aks~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~l 448 (501)
T 3g25_A 374 EKEHFIRATLESLCYQTRDVMEAMSKDSGI---DVQSLRVDGGAVKNNFIMQFQADIV-NTSVERP-EIQETTALGAAFL 448 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHSSC---CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecchhcCHHHHHHHHHHh-CCceEec-CCCcchHHHHHHH
Confidence 455543 23333333333333332222343 4789999999999999999999999 8888665 4678999999999
Q ss_pred HHHHcCC
Q 041815 381 AAVLSGN 387 (475)
Q Consensus 381 a~~~~~~ 387 (475)
|+.-.|.
T Consensus 449 a~~a~G~ 455 (501)
T 3g25_A 449 AGLAVGF 455 (501)
T ss_dssp HHHHTTS
T ss_pred HHHHhCc
Confidence 9988774
No 55
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=96.65 E-value=0.0035 Score=64.49 Aligned_cols=82 Identities=15% Similarity=0.162 Sum_probs=58.0
Q ss_pred EcHHHHH-HHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHH
Q 041815 301 MTRARFE-ELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAV 379 (475)
Q Consensus 301 itr~~~~-~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~ 379 (475)
-+|.++. .+++-+.-.+...++..-+..+. .++.|.++||+++++.+.+.+.+.+ +.+|..+ ...|+.|+|||+
T Consensus 371 ~~~~~i~RAvlEgia~~~r~~le~l~~~~g~---~~~~i~v~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~E~~alGAA~ 445 (526)
T 3ezw_A 371 VNANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAY 445 (526)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEECchhhCHHHHHHHHHHH-CCEEEeC-CCCchHHHHHHH
Confidence 3565543 23333333333333333233443 4789999999999999999999999 8888776 456889999999
Q ss_pred HHHHHcCC
Q 041815 380 QAAVLSGN 387 (475)
Q Consensus 380 ~a~~~~~~ 387 (475)
.|+.-.|.
T Consensus 446 lA~~a~G~ 453 (526)
T 3ezw_A 446 LAGLAVGF 453 (526)
T ss_dssp HHHHHTTS
T ss_pred HHHHHhCC
Confidence 99988874
No 56
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=96.62 E-value=0.0021 Score=66.88 Aligned_cols=77 Identities=16% Similarity=0.207 Sum_probs=56.9
Q ss_pred cHHHHHHHHHHHHHHHHHHHHH---HHHhCCCCCCCCCeEEEecCCC-CcHHHHHHHHHHcCCcccccCCCCcchhhchH
Q 041815 302 TRARFEELNMDLFRKCIKHVDM---CLRTGKTDNSSVDDVVIVGGSA-RIPKVQQLLQEFFNGKRLCKNINPDEAVAYGA 377 (475)
Q Consensus 302 tr~~~~~~~~~~~~~i~~~i~~---~l~~~~~~~~~i~~VvLvGG~s-~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Ga 377 (475)
++.+| ++.+++.+.-.++. .|++.+ ..++.|.++||++ +++.+.+.+.+.+ +.+|..+ .+.|+.|+||
T Consensus 410 t~~~l---~RAvlEgia~~~r~~~~~l~~~g---~~~~~i~~~GGga~ks~~~~Qi~ADv~-g~pV~~~-~~~e~~alGa 481 (572)
T 3jvp_A 410 KPEEI---YRALLEATAFGTRAIVDAFHGRG---VEVHELYACGGLPQKNHLLMQIFADVT-NREIKVA-ASKQTPALGA 481 (572)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTT---CCEEEEEEESSHHHHCHHHHHHHHHHH-TSCEEEB-CCSSHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcC---CCcCEEEEEcCchhhCHHHHHHHHHHH-CCeeEec-CCCccHHHHH
Confidence 56554 44444444333333 334433 3478999999999 9999999999999 7888665 5678999999
Q ss_pred HHHHHHHcC
Q 041815 378 AVQAAVLSG 386 (475)
Q Consensus 378 a~~a~~~~~ 386 (475)
|+.|+.-.|
T Consensus 482 A~lA~~a~G 490 (572)
T 3jvp_A 482 AMFASVAAG 490 (572)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhcC
Confidence 999998877
No 57
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=96.59 E-value=0.0017 Score=66.66 Aligned_cols=52 Identities=19% Similarity=0.117 Sum_probs=44.9
Q ss_pred CCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHHHHHHcCC
Q 041815 334 SVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGN 387 (475)
Q Consensus 334 ~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~~~ 387 (475)
.++.|.++||+++++.+.+.+.+.+ +.+|..+ .+.|+.|+|||+.|+.-.|.
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA~lA~~a~G~ 476 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLL-DAPVDRP-VILETTALGVAWLAGSRAGV 476 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCCCHHHHHHHHHHHHHHTS
T ss_pred CcceEEEeCccccCHHHHHHHHHHh-CCeEEec-CCCccHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999 7888765 46779999999999988874
No 58
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=96.59 E-value=0.0022 Score=65.73 Aligned_cols=52 Identities=23% Similarity=0.321 Sum_probs=45.9
Q ss_pred CCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHHHHHHcCC
Q 041815 334 SVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGN 387 (475)
Q Consensus 334 ~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~~~ 387 (475)
.++.|.++||+++++.+.+.+.+.+ +.+|..+ .+.|+.|+|||+.|+.-.|.
T Consensus 401 ~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G~ 452 (510)
T 2p3r_A 401 RLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAYLAGLAVGF 452 (510)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHHHHTS
T ss_pred CccEEEEeCchhcCHHHHHHHHHHh-CCceEec-CCCCcHHHHHHHHHHHHhCc
Confidence 4689999999999999999999999 8888765 46779999999999988774
No 59
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=96.58 E-value=0.0025 Score=65.27 Aligned_cols=52 Identities=21% Similarity=0.245 Sum_probs=46.1
Q ss_pred CCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHHHHHHcCC
Q 041815 334 SVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGN 387 (475)
Q Consensus 334 ~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~~~ 387 (475)
.++.|.++||+++++.+.+.+.+.+ +.+|..+ .+.|+.|+|||+.|+.-.|.
T Consensus 403 ~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G~ 454 (506)
T 3h3n_X 403 DIPLLKVDGGAAKNDLLMQFQADIL-DIDVQRA-ANLETTALGAAYLAGLAVGF 454 (506)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHH-TSEEEEC-SSSCHHHHHHHHHHHHHTTS
T ss_pred CCCEEEEecccccCHHHHHHHHHHh-CCeEEec-CCCcchhHHHHHHHHHHhCc
Confidence 4689999999999999999999999 8888765 56789999999999988774
No 60
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=96.54 E-value=0.0024 Score=65.42 Aligned_cols=80 Identities=20% Similarity=0.140 Sum_probs=56.2
Q ss_pred cHHHHH-HHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHH
Q 041815 302 TRARFE-ELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQ 380 (475)
Q Consensus 302 tr~~~~-~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~ 380 (475)
++.++- .+++-+.-.+...++ .|++.+. .++.|.++||+++++.+.+.+.+.+ +.+|..+.. .|+.|+|||+.
T Consensus 371 ~~~~l~rAvlEgia~~~~~~~~-~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~~-~e~~alGaA~l 444 (508)
T 3ifr_A 371 TRGHLWRALLEAVALAFRHHVA-VLDDIGH---APQRFFASDGGTRSRVWMGIMADVL-QRPVQLLAN-PLGSAVGAAWV 444 (508)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHHHTC---CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEEEC-CSTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHhcCC---CCCEEEEeCCcccCHHHHHHHHHHh-CCeEEecCC-CCchHHHHHHH
Confidence 565543 233333333333332 3333333 4789999999999999999999999 888877644 56889999999
Q ss_pred HHHHcCC
Q 041815 381 AAVLSGN 387 (475)
Q Consensus 381 a~~~~~~ 387 (475)
|+.-.|.
T Consensus 445 A~~a~G~ 451 (508)
T 3ifr_A 445 AAIGGGD 451 (508)
T ss_dssp HHHHTCS
T ss_pred HHHHhCC
Confidence 9988774
No 61
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=96.51 E-value=0.0047 Score=62.99 Aligned_cols=51 Identities=24% Similarity=0.292 Sum_probs=44.8
Q ss_pred CCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHHHHHHcC
Q 041815 334 SVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSG 386 (475)
Q Consensus 334 ~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~~ 386 (475)
.++.|.++||+++++.+.+.+.+.+ +.+|..+ .+.++.|+|||+.|+.-.|
T Consensus 398 ~~~~i~~~GG~a~n~~~~q~~Adv~-g~pV~~~-~~~e~~alGaA~la~~a~G 448 (495)
T 2dpn_A 398 RLKVLKADGGMAQNRLFLKIQADLL-GVPVAVP-EVTETTALGAALMAGVGAG 448 (495)
T ss_dssp CCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHHT
T ss_pred CCcEEEEecccccCHHHHHHHHHHh-CCeeEec-CCcccHHHHHHHHHHhhcC
Confidence 4678999999999999999999999 7888765 4566899999999988777
No 62
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=96.48 E-value=0.048 Score=52.12 Aligned_cols=44 Identities=18% Similarity=0.208 Sum_probs=29.2
Q ss_pred cCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEE
Q 041815 169 AGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLL 214 (475)
Q Consensus 169 agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~ 214 (475)
.+++ +.+.++..|+|++-...........++++-+|.| .-..++
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtG-iG~giv 163 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTG-VGGGLV 163 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCc-EEEEEE
Confidence 4665 7899999999987543322222567888888887 334444
No 63
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=96.48 E-value=0.12 Score=51.08 Aligned_cols=44 Identities=14% Similarity=0.202 Sum_probs=30.0
Q ss_pred cCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEE
Q 041815 169 AGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLL 214 (475)
Q Consensus 169 agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~ 214 (475)
.|++ +.+.++..|+|++-...........++++-+|.| .-..++
T Consensus 186 ~~~p-v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv 229 (406)
T 1z6r_A 186 TGVP-VYIQHDISAWTMAEALFGASRGARDVIQVVIDHN-VGAGVI 229 (406)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCc-EEEEEE
Confidence 3665 6899999999988654332222567888888887 445554
No 64
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=96.36 E-value=0.0036 Score=64.02 Aligned_cols=81 Identities=17% Similarity=0.172 Sum_probs=56.7
Q ss_pred cHHHHH-HHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHH
Q 041815 302 TRARFE-ELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQ 380 (475)
Q Consensus 302 tr~~~~-~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~ 380 (475)
++.++- .+++-+.-.+...++..-+..+. .++.|.++||+++++.+.+.+.+.+ +.+|..+ .+.|+.|+|||+.
T Consensus 373 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~l 447 (504)
T 2d4w_A 373 NRNHIARAALEATAFQSREVVDAMNADSGV---DLTELRVDGGMVANELLMQFQADQL-GVDVVRP-KVAETTALGAAYA 447 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CcceEEEeCCcccCHHHHHHHHHHh-CCeEEeC-CCCcchHHHHHHH
Confidence 555543 23333443343333332222332 3679999999999999999999999 8888765 5567999999999
Q ss_pred HHHHcCC
Q 041815 381 AAVLSGN 387 (475)
Q Consensus 381 a~~~~~~ 387 (475)
|+.-.|.
T Consensus 448 A~~~~G~ 454 (504)
T 2d4w_A 448 AGIAVGF 454 (504)
T ss_dssp HHHHHTS
T ss_pred HHhhcCc
Confidence 9988773
No 65
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=96.33 E-value=0.73 Score=47.24 Aligned_cols=204 Identities=14% Similarity=0.126 Sum_probs=103.9
Q ss_pred CCCeEEEEe-CCCCCHHHHHHH--HHHHHHcCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEEEeC
Q 041815 142 PVSNAVVTV-PAYFTDSQRQAT--KDAGAMAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEK 218 (475)
Q Consensus 142 ~~~~~vitV-P~~~~~~~r~~l--~~a~~~agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~~~~ 218 (475)
++..+++|. |.+|+.-..-.. +..+...+.+. .-|+.-+|-+++.........+ +++-+.||+|.+..+ ..
T Consensus 72 ~id~ia~~~gPG~~~~l~vg~~~ak~la~~~~~p~-~~v~h~~aH~~~~~~~~~~~~p---~~l~vsGg~t~~~~~--~~ 145 (540)
T 3en9_A 72 EIDLIAFSQGPGLGPSLRVTATVARTLSLTLKKPI-IGVNHCIAHIEIGKLTTEAEDP---LTLYVSGGNTQVIAY--VS 145 (540)
T ss_dssp GCCEEEEEEESSCHHHHHHHHHHHHHHHHHHTCCE-EEEEHHHHHHHHHHHHSSCSSC---EEEEECSSCEEEEEE--ET
T ss_pred HCcEEEEecCCCchhhHHHHHHHHHHHHHHhCCCe-eEeccHHHHHHHHHHhcCCCCC---cEEEEcCCCcEEEEE--eC
Confidence 455666666 777665432211 22334446554 4467777766665554333212 666666788776544 46
Q ss_pred CeEEEEEEcCCCCCchhHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhcCCceeEEEEeccccCccce
Q 041815 219 GIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAVQRLRKDCERAKRILSSTSQTTIEIDSLYEGIDFS 298 (475)
Q Consensus 219 ~~~~v~~~~~~~~~GG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~~i~~~~~~~~~~ 298 (475)
+.++++....+. --|+-||.. ...| +...+. ...+++| |.+.+ . .+.+|....+.+++
T Consensus 146 ~~~~~lg~t~d~-s~G~~~D~~-a~~l--------gl~~~g-g~~ie~l---A~~g~------~--~~~~p~~~~~~~~s 203 (540)
T 3en9_A 146 KKYRVFGETLDI-AVGNCLDQF-ARYV--------NLPHPG-GPYIEEL---ARKGK------K--LVDLPYTVKGMDIA 203 (540)
T ss_dssp TEEEEEEEBSSS-CHHHHHHHH-HHHT--------TCCSSC-HHHHHHH---HHTCC------C--CCCCCCCEETTEEC
T ss_pred CceEEEeeccch-HhHHHHHHH-HHHc--------CCCCCC-HHHHHHH---HHcCC------c--cCcCCCCCCCccee
Confidence 889989887653 446777643 2222 222222 2222322 21111 0 11111111111111
Q ss_pred E-------------EEcHHHHHHHHHH-HHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcC--Ccc
Q 041815 299 S-------------VMTRARFEELNMD-LFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFN--GKR 362 (475)
Q Consensus 299 ~-------------~itr~~~~~~~~~-~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~--~~~ 362 (475)
+ ..+.+++...+.. +++.+.+.+.++++..+ ++.|+|+||-+....+++.+.+... +.+
T Consensus 204 fsgl~~~~~~~~~~~~~~~~ia~~fq~~~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~~~~~~~ 278 (540)
T 3en9_A 204 FSGLLTAAMRAYDAGERLEDICYSLQEYAFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMCEGQNVD 278 (540)
T ss_dssp CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHHHHTTCE
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHHHhcCCE
Confidence 0 0122333322222 34445556666666644 5699999999999999999998763 445
Q ss_pred cccCCC---CcchhhchHH
Q 041815 363 LCKNIN---PDEAVAYGAA 378 (475)
Q Consensus 363 v~~~~~---p~~ava~Gaa 378 (475)
+..+.. .|.++..|.+
T Consensus 279 ~~~p~~~~~~Dngamia~~ 297 (540)
T 3en9_A 279 FYVPPKEFCGDNGAMIAWL 297 (540)
T ss_dssp EECCCHHHHSSCHHHHHHH
T ss_pred EEeCCCcCCCCCHHHHHHH
Confidence 555431 2444444444
No 66
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=96.29 E-value=0.16 Score=47.47 Aligned_cols=47 Identities=21% Similarity=0.192 Sum_probs=32.6
Q ss_pred CCeEEEecCCCCcHHHHHHHHHHcCC------cccccCCCCcchhhchHHHHH
Q 041815 335 VDDVVIVGGSARIPKVQQLLQEFFNG------KRLCKNINPDEAVAYGAAVQA 381 (475)
Q Consensus 335 i~~VvLvGG~s~~p~v~~~l~~~~~~------~~v~~~~~p~~ava~Gaa~~a 381 (475)
++.|+|.||.+..+.+.+.+++.+.. .++......+.+.++||+.++
T Consensus 234 p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 234 CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHH
Confidence 56899999887667777777776632 133334455678899999875
No 67
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=96.25 E-value=0.23 Score=49.41 Aligned_cols=44 Identities=18% Similarity=0.298 Sum_probs=30.1
Q ss_pred cCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEE
Q 041815 169 AGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLL 214 (475)
Q Consensus 169 agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~ 214 (475)
.|++ +.+.++..|+|++-...........++++-+|.| .-..++
T Consensus 208 ~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv 251 (429)
T 1z05_A 208 TGLP-VFVANDTRAWALAEKLFGHSQDVDNSVLISIHHG-LGAGIV 251 (429)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-EEEEEE
Confidence 4665 6899999999988654433223567888888887 344444
No 68
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=96.23 E-value=0.0045 Score=63.28 Aligned_cols=51 Identities=18% Similarity=0.179 Sum_probs=44.6
Q ss_pred C-CeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHHHHHHcCC
Q 041815 335 V-DDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSGN 387 (475)
Q Consensus 335 i-~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~~~ 387 (475)
+ +.|.++||+++++.+.+.+.+.+ +.+|..+ .+.++.|+|||+.|+.-.|.
T Consensus 407 ~~~~i~~~GG~a~s~~~~Q~~Adv~-g~pV~~~-~~~e~~alGaA~la~~~~G~ 458 (503)
T 2w40_A 407 MLHVLRCDGGMTKNKPFMQFNSDII-NTKIEVS-KYKEVTSLGAAVLAGLEVKI 458 (503)
T ss_dssp CCSCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHTTC
T ss_pred ccceEEEeCccccCHHHHHHHHHHH-CCeEEec-CCCcchHHHHHHHHHHHhCc
Confidence 5 78999999999999999999999 7888765 45668999999999887773
No 69
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=96.07 E-value=0.97 Score=42.43 Aligned_cols=63 Identities=16% Similarity=0.115 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCC--cHHHHHHHHHHcCCcccccCCCCcchhhchHHHHHH
Q 041815 310 NMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSAR--IPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAA 382 (475)
Q Consensus 310 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~--~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~ 382 (475)
...++++..+.+-..+...-. . +++.|+|.||.+. .+.+.+.+++.+ . .|+.+.+.||++++.
T Consensus 228 A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i-----~---~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 228 ADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRL-----V---APQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHC-----C---CCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhc-----c---CCCCCHHHHHHHHHh
Confidence 344555555555555554222 2 5788999999864 455666666643 1 256777899998863
No 70
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=96.05 E-value=0.42 Score=45.19 Aligned_cols=49 Identities=24% Similarity=0.322 Sum_probs=34.1
Q ss_pred CCCeEEEecCCCCc-----HHHHHHHHHHcC------CcccccCCCCcchhhchHHHHHH
Q 041815 334 SVDDVVIVGGSARI-----PKVQQLLQEFFN------GKRLCKNINPDEAVAYGAAVQAA 382 (475)
Q Consensus 334 ~i~~VvLvGG~s~~-----p~v~~~l~~~~~------~~~v~~~~~p~~ava~Gaa~~a~ 382 (475)
+++.|+|-||.+.. +.+++.+++.+. ..++....-.+.+.++|||.++.
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~ 298 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAH 298 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 36789999998765 467777777652 12344444557889999998874
No 71
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=95.86 E-value=0.2 Score=46.98 Aligned_cols=68 Identities=9% Similarity=-0.077 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCc--HHHHHHHHHHcCCcccccCCCCcchhhchHHHHHHHH
Q 041815 310 NMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARI--PKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVL 384 (475)
Q Consensus 310 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~--p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~~ 384 (475)
...++++..+.+-..+ .... ..+++.|+|.||.+.. +.+++.+++... ++. .|..+...||+.++...
T Consensus 212 A~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~~~~~l~~~l~~~~~--~i~---~~~~a~~~GA~~la~~~ 281 (291)
T 1zbs_A 212 VYSLVQNSFDDFLVRN-VLRY-NRPDLPLHFIGSVAFHYREVLSSVIKKRGL--TLG---SVLQSPMEGLIQYHHNN 281 (291)
T ss_dssp HHHHHHHHHHHHHHHH-TGGG-CCTTSCEEEESHHHHHTHHHHHHHHHHTTC--CEE---EEESCSHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHH-hccc-CCCCceEEEECchHHhhHHHHHHHHHHcCC--eec---ccCcCHHHHHHHHHHhh
Confidence 4444555555555555 2221 1257899999998876 666777666431 222 25578889999998643
No 72
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=95.84 E-value=0.18 Score=49.19 Aligned_cols=48 Identities=19% Similarity=0.238 Sum_probs=31.5
Q ss_pred CCeEEEecCCCCc-HHHHHHHHHHcC-------CcccccCCCCcchhhchHHHHHH
Q 041815 335 VDDVVIVGGSARI-PKVQQLLQEFFN-------GKRLCKNINPDEAVAYGAAVQAA 382 (475)
Q Consensus 335 i~~VvLvGG~s~~-p~v~~~l~~~~~-------~~~v~~~~~p~~ava~Gaa~~a~ 382 (475)
++.|+|.||.+.. +.+.+.+++.+. ..++....-.+.+.++||+.++.
T Consensus 315 P~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~~ 370 (380)
T 2hoe_A 315 ISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHAL 370 (380)
T ss_dssp CCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHHH
T ss_pred CCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 5689999998864 666666665542 12343333456688999998763
No 73
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=95.65 E-value=1 Score=43.12 Aligned_cols=44 Identities=16% Similarity=0.143 Sum_probs=29.7
Q ss_pred cCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEE
Q 041815 169 AGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLL 214 (475)
Q Consensus 169 agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~ 214 (475)
.|++ +.+.++..|+|++-...........++++-+|.| .-..++
T Consensus 131 ~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 131 LHLP-VWVDNDGNCAALAERKFGQGKGLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCC-EEEEEE
Confidence 3665 6899999999998654332222467888888887 444444
No 74
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=95.63 E-value=0.014 Score=59.45 Aligned_cols=50 Identities=22% Similarity=0.230 Sum_probs=41.8
Q ss_pred CCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHHHHHHcC
Q 041815 334 SVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSG 386 (475)
Q Consensus 334 ~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~~ 386 (475)
.++.|.++||+++++.+.+.+.+.+ +.+|..+. .++.|+||++.|..-.+
T Consensus 393 ~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~~--~e~~alGaa~~A~~a~~ 442 (489)
T 2uyt_A 393 DFSQLHIVGGGCQNTLLNQLCADAC-GIRVIAGP--VEASTLGNIGIQLMTLD 442 (489)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEECC--TTHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCChhhhHHHHHHHHHHH-CCeeecCC--ccHhHHHHHHHHHHHcC
Confidence 3689999999999999999999999 88887653 68999999777655443
No 75
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=95.27 E-value=1.1 Score=42.68 Aligned_cols=51 Identities=24% Similarity=0.322 Sum_probs=33.2
Q ss_pred HHHcCCceeeeeechHHHHHHhhhcc--------C--CCCCceEEEEEeCCCceEEEEEEEe
Q 041815 166 GAMAGLNVLKIISEPTAAAIAYGLDR--------K--ATSEKNVLIFDLGGGTFDVSLLTIE 217 (475)
Q Consensus 166 ~~~agl~~~~~i~Ep~Aaa~~~~~~~--------~--~~~~~~vlvvD~Gggt~dvsv~~~~ 217 (475)
.+..|++.+.+.|+..|+|++-.... . ......++++-+|.|- -..++.-+
T Consensus 98 ~~~~~~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GTGi-G~giv~~g 158 (332)
T 1sz2_A 98 KKNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGL-GVAHLVHV 158 (332)
T ss_dssp HHHHTCSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESSSE-EEEEEEEE
T ss_pred HHHhCCCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCccc-eEEEEecC
Confidence 34458877899999999999865421 0 1124678888898883 34444433
No 76
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=95.06 E-value=0.039 Score=55.88 Aligned_cols=72 Identities=11% Similarity=0.017 Sum_probs=54.2
Q ss_pred HHHHHHHHHH--HHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHH-cCCcccccCCCCcchhhchHHHHHHH
Q 041815 307 EELNMDLFRK--CIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEF-FNGKRLCKNINPDEAVAYGAAVQAAV 383 (475)
Q Consensus 307 ~~~~~~~~~~--i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~-~~~~~v~~~~~p~~ava~Gaa~~a~~ 383 (475)
..+.+.+++. +.-.++..++.... .+.|.++||+++++.+.+.+.+. | +.+|..+. ..|+.|+|||+.|+.
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~~----~~~i~~~GG~a~s~~w~Qi~ADv~~-g~pV~~~~-~~e~~alGAA~lA~~ 435 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIGS----TGRILVEGRFAEADVFVRALASLRP-DCAVYTAN-AHNDVSFGALRLIDP 435 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTC----CSEEEEESGGGGCHHHHHHHHHHST-TSEEEEES-SCCCTTGGGHHHHCT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcC----CCeEEEeCCcccCHHHHHHHhhhcC-CCeEEEcC-CCchHHHHHHHHhCc
Confidence 4555555553 44455566665432 26899999999999999999999 9 88887774 456889999999875
Q ss_pred H
Q 041815 384 L 384 (475)
Q Consensus 384 ~ 384 (475)
-
T Consensus 436 a 436 (482)
T 3h6e_A 436 G 436 (482)
T ss_dssp T
T ss_pred c
Confidence 4
No 77
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=94.59 E-value=0.024 Score=53.56 Aligned_cols=40 Identities=20% Similarity=0.164 Sum_probs=27.9
Q ss_pred eeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEEE
Q 041815 173 VLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTI 216 (475)
Q Consensus 173 ~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~~ 216 (475)
.-.....|.|.|....... ....+++|||+.|||+..+.-
T Consensus 107 ~~~aaanw~ASa~~~A~~~----~~~~llvDIGsTTTDIipi~~ 146 (334)
T 3cet_A 107 MKVSASNWCGTAKWVSKNI----EENCILVDMGSTTTDIIPIVE 146 (334)
T ss_dssp GGTBCCSSHHHHHHHHHHT----CSSEEEEEECSSCEEEEEEET
T ss_pred HHHHhcCHHHHHHHHHHhc----CCCEEEEEcCcchhhhhhhcC
Confidence 3345567777777433331 135899999999999988873
No 78
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=94.40 E-value=0.023 Score=38.10 Aligned_cols=40 Identities=25% Similarity=0.652 Sum_probs=32.4
Q ss_pred ccceeccCcccccccccCCCCCCceeecccCCCCCCcCCCC
Q 041815 433 HDLQLKNHKTLSKCNGCKRPAFGLMYRCELCNFNLHIPCMF 473 (475)
Q Consensus 433 h~l~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~ 473 (475)
|.+..+.-..+-.|+.|+..-. ..|.|+.|.+..|+.|+-
T Consensus 4 H~F~~~~~~~pt~C~~C~~~l~-qG~~C~~C~~~~H~~C~~ 43 (52)
T 1faq_A 4 HNFARKTFLKLAFCDICQKFLL-NGFRCQTCGYKFHEHCST 43 (52)
T ss_dssp CCCEEECCSSCEECTTSSSEEC-SEEECTTTTCCBCSTTSS
T ss_pred ceeEeEeCCCCcCCCCcccccc-cCCEeCCCCCeEChhHHh
Confidence 5566555555679999988766 799999999999999974
No 79
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=94.28 E-value=0.017 Score=40.21 Aligned_cols=41 Identities=29% Similarity=0.587 Sum_probs=32.2
Q ss_pred cccceeccCcccccccccCCC-CCC-ceeecccCCCCCCcCCC
Q 041815 432 AHDLQLKNHKTLSKCNGCKRP-AFG-LMYRCELCNFNLHIPCM 472 (475)
Q Consensus 432 ~h~l~~~~~~~~~~c~~c~~~-~~~-~~~~~~~~~~~~~~~~~ 472 (475)
.|.++.+.-..+-.|+.|+.. +.| +.|+|.+|.+.-|++|.
T Consensus 8 ~H~F~~kt~~~~~~C~~Cg~~i~~gkq~~kC~dC~~~cH~~C~ 50 (61)
T 4b6d_A 8 LHDFVSKTVIKPESCVPCGKRIKFGKLSLKCRDCRVVSHPECR 50 (61)
T ss_dssp CCCEEEEECCSCEECTTTCCEECTTCEEEEESSSSCEECGGGG
T ss_pred ceeEEeeeccCCcccccccCEEEEeeEeeECCCCCCeEchhHh
Confidence 567776655555799999654 455 78999999999999995
No 80
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=94.09 E-value=0.75 Score=47.54 Aligned_cols=58 Identities=19% Similarity=0.217 Sum_probs=44.8
Q ss_pred ceEEEcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHH
Q 041815 297 FSSVMTRARFEELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQ 355 (475)
Q Consensus 297 ~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~ 355 (475)
..+.||..+++++... -..|..-++-.|+.++++..+|+.|+|.||++.-=-+.+++.
T Consensus 498 ~~i~itq~DIr~~qlA-KaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~ 555 (631)
T 3zyy_X 498 KDIVITEADIQNLIRA-KAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAIT 555 (631)
T ss_dssp SCEEEEHHHHHHHHHH-HHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHH
T ss_pred CcEEEeHHHHHHHHHH-HHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhh
Confidence 4588999999985433 344667777888999999999999999999988555555544
No 81
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=93.99 E-value=0.0065 Score=40.77 Aligned_cols=28 Identities=32% Similarity=0.966 Sum_probs=23.9
Q ss_pred cccccccCCCCCCceeecccC-CCCCCcCC
Q 041815 443 LSKCNGCKRPAFGLMYRCELC-NFNLHIPC 471 (475)
Q Consensus 443 ~~~c~~c~~~~~~~~~~~~~~-~~~~~~~~ 471 (475)
.+.||+|+.. .|.+|+|..| ||||=..|
T Consensus 6 ~~~Cd~C~~~-ig~R~~C~~C~dyDLC~~C 34 (52)
T 1tot_A 6 VYTCNECKHH-VETRWHCTVCEDYDLCINC 34 (52)
T ss_dssp CEEETTTTEE-ESSEEEESSSSSCEECHHH
T ss_pred EEECCCCCCC-CcceEEcCCCCCchhHHHH
Confidence 3899999998 5899999999 88886655
No 82
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.92 E-value=0.035 Score=40.38 Aligned_cols=43 Identities=26% Similarity=0.475 Sum_probs=34.8
Q ss_pred ccccceeccCcccccccccCCCCCC---ceeecccCCCCCCcCCCC
Q 041815 431 QAHDLQLKNHKTLSKCNGCKRPAFG---LMYRCELCNFNLHIPCMF 473 (475)
Q Consensus 431 ~~h~l~~~~~~~~~~c~~c~~~~~~---~~~~~~~~~~~~~~~~~~ 473 (475)
..|.++...-..+-.|+.|+..=.| -.|+|+.|.|..|..|+-
T Consensus 16 ~~H~F~~~~f~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~ 61 (74)
T 2db6_A 16 KPHKFKDHFFKKPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQS 61 (74)
T ss_dssp SBCCEEEEECSSCEECSSSCCEECHHHHEEEEESSSCCEECTTTTG
T ss_pred CCCceEEeeCCCCcCchhcChhhccccCCccccCCCCCccChhHHh
Confidence 3577777766666789999887555 579999999999999973
No 83
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=93.91 E-value=0.016 Score=38.48 Aligned_cols=41 Identities=27% Similarity=0.591 Sum_probs=31.2
Q ss_pred ccceeccCcccccccccCCCCCC---ceeecccCCCCCCcCCCC
Q 041815 433 HDLQLKNHKTLSKCNGCKRPAFG---LMYRCELCNFNLHIPCMF 473 (475)
Q Consensus 433 h~l~~~~~~~~~~c~~c~~~~~~---~~~~~~~~~~~~~~~~~~ 473 (475)
|.++...-..+-.|+.|+..=-| ..|+|+.|+|..|+.|+-
T Consensus 1 H~F~~~~~~~pt~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~ 44 (50)
T 1ptq_A 1 HRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCRE 44 (50)
T ss_dssp CCEEEECCSSCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHT
T ss_pred CCCEeecCCCCCCcCCCCceeeccCCccCEeCCCCCeECHHHhh
Confidence 44555555556689999887444 789999999999999964
No 84
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=93.86 E-value=0.04 Score=36.33 Aligned_cols=40 Identities=23% Similarity=0.565 Sum_probs=30.0
Q ss_pred ccceeccCcccccccccCCCCCCceeecccCCCCCCcCCCCC
Q 041815 433 HDLQLKNHKTLSKCNGCKRPAFGLMYRCELCNFNLHIPCMFI 474 (475)
Q Consensus 433 h~l~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (475)
|.+..+.... -.||.|+..=. ..|+|++|+|.-|.+|+-+
T Consensus 5 HrF~~~t~~~-t~C~~C~k~i~-~G~kC~~Ck~~cH~kC~~~ 44 (49)
T 1kbe_A 5 HRFSTKSWLS-QVCNVCQKSMI-FGVKCKHCRLKCHNKCTKE 44 (49)
T ss_dssp CCEEEECCSS-CCCSSSCCSSC-CEEEETTTTEEESSSCTTT
T ss_pred cccCccCCCC-cCccccCceeE-CcCCCCCCCCccchhhcCc
Confidence 4455444333 57999998865 3599999999999999853
No 85
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=93.75 E-value=0.039 Score=38.99 Aligned_cols=42 Identities=26% Similarity=0.637 Sum_probs=33.3
Q ss_pred cccceeccCcccccccccCCCCCC---ceeecccCCCCCCcCCCC
Q 041815 432 AHDLQLKNHKTLSKCNGCKRPAFG---LMYRCELCNFNLHIPCMF 473 (475)
Q Consensus 432 ~h~l~~~~~~~~~~c~~c~~~~~~---~~~~~~~~~~~~~~~~~~ 473 (475)
.|.++...-..+-.|+.|+..=-| ..|+|+.|.|..|+.|+-
T Consensus 12 ~H~F~~~~~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~ 56 (65)
T 2enz_A 12 PHRFKVYNYKSPTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQT 56 (65)
T ss_dssp CCCEEECCCCSCCBCSSSCCBCCCSSSCSEEESSSCCEECTTTTT
T ss_pred CCccEeEcCCCCcCchhcChhheecCCcccccCCCCCccCHhHHh
Confidence 466666665566789999887443 679999999999999974
No 86
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.68 E-value=0.066 Score=40.03 Aligned_cols=42 Identities=21% Similarity=0.693 Sum_probs=33.7
Q ss_pred cccceeccCcccccccccCCCCCC---ceeecccCCCCCCcCCCC
Q 041815 432 AHDLQLKNHKTLSKCNGCKRPAFG---LMYRCELCNFNLHIPCMF 473 (475)
Q Consensus 432 ~h~l~~~~~~~~~~c~~c~~~~~~---~~~~~~~~~~~~~~~~~~ 473 (475)
-|.++...-..+-.|+.|+..=.| -.|.|+.|.|..|..|+-
T Consensus 17 ~H~F~~~~~~~pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~ 61 (85)
T 2eli_A 17 KHKFKIHTYGSPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVI 61 (85)
T ss_dssp SCCCEEECCSSCCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTT
T ss_pred CcccEeeeCCCCcCCcccCccccccccCCCcCCCcCCccCHhHHh
Confidence 477776665666789999887544 679999999999999974
No 87
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=93.67 E-value=0.032 Score=41.47 Aligned_cols=44 Identities=20% Similarity=0.480 Sum_probs=33.5
Q ss_pred ccccccceeccCcccccccccCCC--CCCc---eeecccCCCCCCcCCC
Q 041815 429 SHQAHDLQLKNHKTLSKCNGCKRP--AFGL---MYRCELCNFNLHIPCM 472 (475)
Q Consensus 429 ~~~~h~l~~~~~~~~~~c~~c~~~--~~~~---~~~~~~~~~~~~~~~~ 472 (475)
.+..|.+....-..+=-|+.|+.. |-+. .|.|+.|.|..|..|.
T Consensus 21 ~~~~H~F~~~~~~~PT~Cd~C~~~lWGl~kqp~G~~C~~C~~~~HkrC~ 69 (84)
T 2row_A 21 CHKGHEFIPTLYHFPTNCEACMKPLWHMFKPPPALECRRCHIKCHKDHM 69 (84)
T ss_dssp EETTEEEEEECCSSCEECSSSSSEECCSSSCCCEEEESSSCCEEEHHHH
T ss_pred EcCCcceEeEcCCCCcchhhcCHhhhccccCCCCCEecCCCCccchhHh
Confidence 344577776654455579999987 5444 9999999999999985
No 88
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.55 E-value=0.049 Score=40.55 Aligned_cols=43 Identities=26% Similarity=0.578 Sum_probs=34.2
Q ss_pred ccccceeccCcccccccccCCCCCC---ceeecccCCCCCCcCCCC
Q 041815 431 QAHDLQLKNHKTLSKCNGCKRPAFG---LMYRCELCNFNLHIPCMF 473 (475)
Q Consensus 431 ~~h~l~~~~~~~~~~c~~c~~~~~~---~~~~~~~~~~~~~~~~~~ 473 (475)
..|.+..+.-..+-.|+.|+..=-| ..|.|..|.|..|..|+-
T Consensus 16 ~~H~F~~~~~~~pt~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~ 61 (83)
T 2yuu_A 16 KNHEFIATFFGQPTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCID 61 (83)
T ss_dssp GGCCEEEECCSSCCCCSSSCCCCCSSSCCEEEETTTCCEECTTGGG
T ss_pred CCCceEeEeCCCCcChhhcChhhccccccccccCCcCCeeChhhhh
Confidence 3577777665666789999987443 589999999999999974
No 89
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.29 E-value=0.022 Score=39.94 Aligned_cols=28 Identities=36% Similarity=1.017 Sum_probs=23.9
Q ss_pred ccccccCC-CCCCceeecccC-CCCCCcCC
Q 041815 444 SKCNGCKR-PAFGLMYRCELC-NFNLHIPC 471 (475)
Q Consensus 444 ~~c~~c~~-~~~~~~~~~~~~-~~~~~~~~ 471 (475)
..||+|+. |=.|.+|+|..| ||||=..|
T Consensus 12 ~~Cd~C~~~pi~G~RykC~~C~d~DLC~~C 41 (63)
T 2e5r_A 12 VECSYCHSESMMGFRYRCQQCHNYQLCQDC 41 (63)
T ss_dssp SCCSSSCCCSSCSCEEEESSCSSCEECHHH
T ss_pred CCCcCCCCcceecceEEecCCCCchhHHHH
Confidence 68999996 477999999999 89886665
No 90
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=93.27 E-value=0.046 Score=39.43 Aligned_cols=42 Identities=24% Similarity=0.464 Sum_probs=32.6
Q ss_pred ccccee-ccCcccccccccCCCCCCceeecccCCCCCCcCCCC
Q 041815 432 AHDLQL-KNHKTLSKCNGCKRPAFGLMYRCELCNFNLHIPCMF 473 (475)
Q Consensus 432 ~h~l~~-~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~ 473 (475)
.|.+.. ..-..+--|+-|+..=.--.|+|+.|+|..|..|.-
T Consensus 23 ~H~F~~~~~~~~pt~C~~C~~~l~~qG~kC~~C~~~cHkkC~~ 65 (72)
T 2fnf_X 23 GHRFVELALRGGPGWCDLCGREVLRQALRCANCKFTCHSECRS 65 (72)
T ss_dssp SCCCEECCCCSSCCBCTTTSSBCSSCCEECTTSSCEECTGGGG
T ss_pred CCccceeecCCCCcchhhhhHHHHhCcCccCCCCCeechhhhc
Confidence 355555 555555689999877666789999999999999973
No 91
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=93.27 E-value=0.017 Score=51.77 Aligned_cols=77 Identities=18% Similarity=0.125 Sum_probs=50.8
Q ss_pred eEEEecccCCCCcccc----------cccccc-cccCC-CCCCCCCccccccceec-----cCcccccccccCCCCCCce
Q 041815 395 IVILDVNPNYNSPLEL----------KTTTSF-AAQNL-PSRGGHKSHQAHDLQLK-----NHKTLSKCNGCKRPAFGLM 457 (475)
Q Consensus 395 ~~~~d~~p~~~~~~~~----------~~~~~~-~~~~~-~~~~~~~~~~~h~l~~~-----~~~~~~~c~~c~~~~~~~~ 457 (475)
++++||+|+|+|.... +++.|. .++.+ +..++|+...+|++++. +|..+++|.+-++|-....
T Consensus 1 ~~l~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G 80 (219)
T 4e81_A 1 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRG 80 (219)
T ss_dssp CCCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTT
T ss_pred CeEEEecCcEEEEEEeCCEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEeCCCCCCCC
Confidence 3578999999764221 222222 22333 57899999889988854 5677899999989876655
Q ss_pred eecccCCCCCCcCC
Q 041815 458 YRCELCNFNLHIPC 471 (475)
Q Consensus 458 ~~~~~~~~~~~~~~ 471 (475)
-...+..|++....
T Consensus 81 ~~~IeVtf~iD~nG 94 (219)
T 4e81_A 81 MPQIEVTFDIDADG 94 (219)
T ss_dssp CSCEEEEEEECTTC
T ss_pred CceEEEEEEeCCCC
Confidence 55556666665543
No 92
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=93.13 E-value=3.3 Score=42.37 Aligned_cols=80 Identities=18% Similarity=0.151 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCcccccCC-CCcchhhchHHHH
Q 041815 303 RARFEELNMDLF-RKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNI-NPDEAVAYGAAVQ 380 (475)
Q Consensus 303 r~~~~~~~~~~~-~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~-~p~~ava~Gaa~~ 380 (475)
..++...+...+ +-+.+.+..+.+..+ ++.|+|+||.+....+++.|.+..+-..+..+. -.|.++++|+|++
T Consensus 280 ~~dIAasfQ~~l~~~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~ 354 (576)
T 3ven_A 280 YRDLAATAQAALERAVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAA 354 (576)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHH
Confidence 455544444433 334455556655533 679999999999999999998765222333332 3488999999999
Q ss_pred HHHHcCC
Q 041815 381 AAVLSGN 387 (475)
Q Consensus 381 a~~~~~~ 387 (475)
+....|.
T Consensus 355 a~~~~g~ 361 (576)
T 3ven_A 355 VAVELGD 361 (576)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 8877664
No 93
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=93.04 E-value=0.022 Score=43.74 Aligned_cols=32 Identities=38% Similarity=0.928 Sum_probs=26.0
Q ss_pred cCcccccccccCC-CCCCceeecccC-CCCCCcCC
Q 041815 439 NHKTLSKCNGCKR-PAFGLMYRCELC-NFNLHIPC 471 (475)
Q Consensus 439 ~~~~~~~c~~c~~-~~~~~~~~~~~~-~~~~~~~~ 471 (475)
.|.. ..||+|+. |=.|.+|+|..| ||||=..|
T Consensus 28 ~H~g-v~Cd~C~~~pI~G~RykC~~C~d~DLC~~C 61 (98)
T 2dip_A 28 KHLG-IPCNNCKQFPIEGKCYKCTECIEYHLCQEC 61 (98)
T ss_dssp SCCC-CCCSSSCCSSCCSCEEEESSSSSCEEEHHH
T ss_pred ccCC-CCCcCCCCCCcccCeEECCCCCCccHHHHH
Confidence 3444 79999997 566999999999 89986666
No 94
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=93.03 E-value=0.034 Score=45.70 Aligned_cols=81 Identities=16% Similarity=0.078 Sum_probs=48.2
Q ss_pred ccceEEEecccCCCCcccc----------cccccc-cccCC-CCCCCCCccccccceec-----cCcccccccccCCCCC
Q 041815 392 VEDIVILDVNPNYNSPLEL----------KTTTSF-AAQNL-PSRGGHKSHQAHDLQLK-----NHKTLSKCNGCKRPAF 454 (475)
Q Consensus 392 ~~~~~~~d~~p~~~~~~~~----------~~~~~~-~~~~~-~~~~~~~~~~~h~l~~~-----~~~~~~~c~~c~~~~~ 454 (475)
++++.++|++|++++.... ++..|. ..+.+ +..++|+...++.+++. +|..++++..-++|..
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~gipp~ 93 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPA 93 (135)
T ss_dssp -------CCCSSCCCEEETTTEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSSSCSSSEEEEEEECCCCCSC
T ss_pred eCcEEEEEeecCcEEEEEECCEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCcccccCcEEEEEEEeCCCCC
Confidence 5788999999999874211 222222 12333 57788998888888854 5667788888888766
Q ss_pred CceeecccCCCCCCcCCC
Q 041815 455 GLMYRCELCNFNLHIPCM 472 (475)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~ 472 (475)
...-.+-+..|++....-
T Consensus 94 p~G~~~IeVtf~iD~nGi 111 (135)
T 1q5l_A 94 PRGMPQIEVTFDIDADGI 111 (135)
T ss_dssp CSSSCCEEEEEEECTTSE
T ss_pred CCceeEEEEEEEECCCCE
Confidence 555556677777766543
No 95
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=92.96 E-value=1.1 Score=40.76 Aligned_cols=21 Identities=19% Similarity=0.249 Sum_probs=18.1
Q ss_pred CCEEEEecCCccEEEEEEECC
Q 041815 7 APAIGIDLGTTYSCVGVWQHD 27 (475)
Q Consensus 7 ~~vvGIDlGTt~s~va~~~~g 27 (475)
+..+.||+|.|+++.++++++
T Consensus 3 ~M~L~IDIGNT~ik~gl~~~~ 23 (249)
T 3bex_A 3 PMYLLVDVGNTHSVFSITEDG 23 (249)
T ss_dssp CEEEEEEECSSEEEEEEESSS
T ss_pred ceEEEEEECCCeEEEEEEECC
Confidence 357999999999999998755
No 96
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=92.90 E-value=0.044 Score=38.84 Aligned_cols=41 Identities=24% Similarity=0.566 Sum_probs=32.8
Q ss_pred cccceeccCcccccccccCCCCCC---ceeecccCCCCCCcCCC
Q 041815 432 AHDLQLKNHKTLSKCNGCKRPAFG---LMYRCELCNFNLHIPCM 472 (475)
Q Consensus 432 ~h~l~~~~~~~~~~c~~c~~~~~~---~~~~~~~~~~~~~~~~~ 472 (475)
.|.++...-..+-.||.|+..=.| -.|.|+.|+|..|+.|+
T Consensus 13 ~H~F~~~~~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~ 56 (66)
T 1y8f_A 13 QHNFEVWTATTPTYCYECEGLLWGIARQGMRCTECGVKCHEKCQ 56 (66)
T ss_dssp CCCEEEEECSSCCCCTTTCCCCCSSCCEEEEETTTCCEECTTHH
T ss_pred CcccEeeeCCCCcChhhcChhhcccCcceeEcCCCCCeeCHHHH
Confidence 466776665566789999987544 57999999999999995
No 97
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=92.84 E-value=0.03 Score=39.54 Aligned_cols=43 Identities=23% Similarity=0.505 Sum_probs=34.2
Q ss_pred ccccceeccCcccccccccCCC--CC-CceeecccCCCCCCcCCCC
Q 041815 431 QAHDLQLKNHKTLSKCNGCKRP--AF-GLMYRCELCNFNLHIPCMF 473 (475)
Q Consensus 431 ~~h~l~~~~~~~~~~c~~c~~~--~~-~~~~~~~~~~~~~~~~~~~ 473 (475)
..|.++.+.-..+-.|+.|+.. |- -..|.|+.|+|..|+.|+-
T Consensus 8 ~~H~F~~~~~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~ 53 (65)
T 3uej_A 8 GSHRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCRE 53 (65)
T ss_dssp EECCEEEECCSSCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHT
T ss_pred CCceEEeEeCCCCCcccccChhhhccCceeeECCCCCCeEchhHhh
Confidence 3577777766666789999886 43 2679999999999999974
No 98
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=92.01 E-value=0.029 Score=38.78 Aligned_cols=42 Identities=24% Similarity=0.464 Sum_probs=32.8
Q ss_pred ccccee-ccCcccccccccCCCCCCceeecccCCCCCCcCCCC
Q 041815 432 AHDLQL-KNHKTLSKCNGCKRPAFGLMYRCELCNFNLHIPCMF 473 (475)
Q Consensus 432 ~h~l~~-~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~ 473 (475)
.|.+.. ..-..+-.||-|+..=.-..|+|+.|+|..|..|.-
T Consensus 10 ~H~F~~~~~~~~pt~C~~C~~~i~kqg~kC~~C~~~cH~kC~~ 52 (59)
T 1rfh_A 10 GHRFVELALRGGPGWCDLCGREVLRQALRCANCKFTCHSECRS 52 (59)
T ss_dssp SCCCEECCCSSCCEECTTTCSEECSCCEECTTTSCEECHHHHT
T ss_pred CCcCeeeeccCCCeEchhcchhhhhCccEeCCCCCeEehhhhh
Confidence 356666 555666789999876556789999999999999963
No 99
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=91.73 E-value=0.4 Score=48.71 Aligned_cols=76 Identities=21% Similarity=0.280 Sum_probs=47.6
Q ss_pred HHHHHHHHHHcCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEEEeCCeEEEEEEcCCCCCchhHHH
Q 041815 159 RQATKDAGAMAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLTIEKGIFKVKATAGDTHLGGEDFD 238 (475)
Q Consensus 159 r~~l~~a~~~agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~~~~~~~GG~~id 238 (475)
.+.+..+-+..|++.-.+-.|-+|...+.+...... ....+|+|+|||+|.+++++ ++.+ ....+.++|.-.+.
T Consensus 103 ~~fl~~i~~~tG~~ievIsG~EEA~l~~~gv~~~~~-~~~~lvvDIGGGStEl~~~~--~~~~---~~~~Sl~lG~vrl~ 176 (508)
T 3hi0_A 103 PDFIREAEAILGCEIEVLSGEKEALYSAYGVISGFY-QPDGIAGDLGGGSLELIDIK--DKSC---GEGITLPLGGLRLS 176 (508)
T ss_dssp HHHHHHHHHHHTSCEEECCHHHHHHHHHHHHHHHSS-SCEEEEEEECSSCEEEEEEE--TTEE---CCCEEESCCHHHHH
T ss_pred HHHHHHHHHHHCCCeEEecHHHHHHHHHHHHHhcCC-CCCeEEEEeCCCceEEEEee--CCee---eeEEEecceEEehh
Confidence 345555666679987544455555554444433222 23459999999999999987 3322 22334688988877
Q ss_pred HH
Q 041815 239 NR 240 (475)
Q Consensus 239 ~~ 240 (475)
+.
T Consensus 177 e~ 178 (508)
T 3hi0_A 177 EQ 178 (508)
T ss_dssp HH
T ss_pred hc
Confidence 53
No 100
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=91.33 E-value=0.065 Score=46.42 Aligned_cols=79 Identities=15% Similarity=0.025 Sum_probs=47.5
Q ss_pred cceEEEecccCCCCccc----------ccccccc-cccCC-CCCCCCCccccccceec-----cCcccccccccCCCCCC
Q 041815 393 EDIVILDVNPNYNSPLE----------LKTTTSF-AAQNL-PSRGGHKSHQAHDLQLK-----NHKTLSKCNGCKRPAFG 455 (475)
Q Consensus 393 ~~~~~~d~~p~~~~~~~----------~~~~~~~-~~~~~-~~~~~~~~~~~h~l~~~-----~~~~~~~c~~c~~~~~~ 455 (475)
..+.++||+|+|+|... -+++.|. ..+.+ +..++|+...++.+++. +|..+++|.+-++|-..
T Consensus 18 ~~f~l~DV~P~slGie~~gg~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gipp~p 97 (182)
T 3n8e_A 18 LYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPAP 97 (182)
T ss_dssp ------CBCSSCEEEECTTSBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCC
T ss_pred CCEEEEEecCCEEEEEEeCCEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceEEEEEEcCCCCCC
Confidence 45689999999977422 1222233 22333 67899998888888854 56778999998888665
Q ss_pred ceeecccCCCCCCcCC
Q 041815 456 LMYRCELCNFNLHIPC 471 (475)
Q Consensus 456 ~~~~~~~~~~~~~~~~ 471 (475)
..-...+..|++....
T Consensus 98 ~G~~~IeVtf~iD~nG 113 (182)
T 3n8e_A 98 RGVPQIEVTFDIDANG 113 (182)
T ss_dssp TTCSCEEEEEEECTTC
T ss_pred CCCeeEEEEEEEecCC
Confidence 5555455666655443
No 101
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=91.19 E-value=0.068 Score=39.12 Aligned_cols=42 Identities=21% Similarity=0.520 Sum_probs=33.2
Q ss_pred cccceeccCcccccccccCCCCC---CceeecccCCCCCCcCCCC
Q 041815 432 AHDLQLKNHKTLSKCNGCKRPAF---GLMYRCELCNFNLHIPCMF 473 (475)
Q Consensus 432 ~h~l~~~~~~~~~~c~~c~~~~~---~~~~~~~~~~~~~~~~~~~ 473 (475)
.|.+..+.-..+-.|+.|+..=- -..|.|+.|.|..|..|.-
T Consensus 23 ~H~F~~~~f~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~ 67 (77)
T 2enn_A 23 CHEFTATFFPQPTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCID 67 (77)
T ss_dssp SCEEEEECCSSCEECSSSCCEECCTTCCEEECSSSCCEEESGGGS
T ss_pred CCccEEEcCCCCcCccccChhhccccccccCcCCCCCcCCHhHHh
Confidence 57777666556678999998643 3679999999999999974
No 102
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=91.04 E-value=0.99 Score=42.40 Aligned_cols=44 Identities=18% Similarity=0.197 Sum_probs=30.0
Q ss_pred cCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEE
Q 041815 169 AGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLL 214 (475)
Q Consensus 169 agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~ 214 (475)
.|++ +.+.++..|+|++-.........++++++-+|.| .-.+++
T Consensus 97 ~~~p-V~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtG-iG~gii 140 (302)
T 3epq_A 97 MXIP-VGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTG-IGAGAI 140 (302)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEE
Confidence 3775 6899999999998655433333567888888876 334444
No 103
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=91.02 E-value=0.063 Score=45.07 Aligned_cols=75 Identities=12% Similarity=-0.005 Sum_probs=46.9
Q ss_pred EEecccCCCCccc----------ccccccc-cccCC-CCCCCCCcccccccee-----ccCcccccccccCCCCCCceee
Q 041815 397 ILDVNPNYNSPLE----------LKTTTSF-AAQNL-PSRGGHKSHQAHDLQL-----KNHKTLSKCNGCKRPAFGLMYR 459 (475)
Q Consensus 397 ~~d~~p~~~~~~~----------~~~~~~~-~~~~~-~~~~~~~~~~~h~l~~-----~~~~~~~~c~~c~~~~~~~~~~ 459 (475)
+.||+|+|+|... -+++.|. ..+.+ +..++|+...++.+++ ++|..+++|.+-++|-....-.
T Consensus 2 ~~Dv~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVP 81 (152)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCC
T ss_pred ceeeecceEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEeCCCCCCCCCc
Confidence 5788999876321 1222222 12333 5788998888888885 4567889999998987655555
Q ss_pred cccCCCCCCcCC
Q 041815 460 CELCNFNLHIPC 471 (475)
Q Consensus 460 ~~~~~~~~~~~~ 471 (475)
.-+..|++....
T Consensus 82 ~IeVtf~iD~nG 93 (152)
T 3dob_A 82 QIEVTFNIDANG 93 (152)
T ss_dssp CEEEEEEECTTC
T ss_pred eEEEEEEeCCCC
Confidence 555666655543
No 104
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=90.71 E-value=0.61 Score=46.59 Aligned_cols=55 Identities=13% Similarity=-0.001 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHcCCc--eeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEE
Q 041815 157 SQRQATKDAGAMAGLN--VLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLT 215 (475)
Q Consensus 157 ~~r~~l~~a~~~agl~--~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~ 215 (475)
.-++.+.++.+..|++ ++.++|+..|++++-.+.. ...++.+=+|-|+=-.-+..
T Consensus 164 ~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~~----~~~~iglilGTGvgg~~i~~ 220 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYTD----AXIKMGIIFGSGVNAAYWCD 220 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHC----TTEEEEEEESSSEEEEEEEC
T ss_pred HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhcC----CccEEEEEECcEEEEEEEEC
Confidence 4467777877666664 5899999999999877732 45677777888854444433
No 105
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=90.34 E-value=0.071 Score=39.46 Aligned_cols=30 Identities=27% Similarity=0.722 Sum_probs=25.4
Q ss_pred ccccccCC-CCCCceeecccCC----CCCCcCCCC
Q 041815 444 SKCNGCKR-PAFGLMYRCELCN----FNLHIPCMF 473 (475)
Q Consensus 444 ~~c~~c~~-~~~~~~~~~~~~~----~~~~~~~~~ 473 (475)
+.||+|+. |=.|.||+|..|. |||=..|..
T Consensus 22 ~~Cd~C~~~pI~G~RykC~~C~d~~~yDLC~~C~~ 56 (82)
T 2fc7_A 22 FKCDNCGIEPIQGVRWHCQDCPPEMSLDFCDSCSD 56 (82)
T ss_dssp CCCSSSCCSSEESCEEEESSSCSSSCCEEEGGGTT
T ss_pred CCCCCCCCCcceeceEECCcCCCCcceecHHHHHh
Confidence 79999996 5568999999994 999888854
No 106
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=90.27 E-value=0.079 Score=44.47 Aligned_cols=74 Identities=14% Similarity=-0.034 Sum_probs=47.0
Q ss_pred EEecccCCCCccc----------ccccccc-cccCC-CCCCCCCccccccceec-----cCcccccccccCCCCCCceee
Q 041815 397 ILDVNPNYNSPLE----------LKTTTSF-AAQNL-PSRGGHKSHQAHDLQLK-----NHKTLSKCNGCKRPAFGLMYR 459 (475)
Q Consensus 397 ~~d~~p~~~~~~~----------~~~~~~~-~~~~~-~~~~~~~~~~~h~l~~~-----~~~~~~~c~~c~~~~~~~~~~ 459 (475)
+.||+|+|+|... -+++.|. ..+.+ +..++|+...++.+++. +|..++.|.+-++|-....-.
T Consensus 2 ~~Dv~p~slGi~~~gg~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ccceeccEEEEEEcCCEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEeCCCCCCCCCc
Confidence 5688999876321 1222232 12333 67889998888888854 567889999998887655555
Q ss_pred cccCCCCCCcC
Q 041815 460 CELCNFNLHIP 470 (475)
Q Consensus 460 ~~~~~~~~~~~ 470 (475)
.-+..|++...
T Consensus 82 ~I~Vtf~iD~n 92 (152)
T 3h0x_A 82 QIEVTFALDAN 92 (152)
T ss_dssp CEEEEEEECTT
T ss_pred eEEEEEEEcCC
Confidence 45555655544
No 107
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=90.01 E-value=0.078 Score=44.44 Aligned_cols=74 Identities=18% Similarity=0.060 Sum_probs=46.2
Q ss_pred EEecccCCCCccc----------ccccccc-cccCC-CCCCCCCcccccccee-----ccCcccccccccCCCCCCceee
Q 041815 397 ILDVNPNYNSPLE----------LKTTTSF-AAQNL-PSRGGHKSHQAHDLQL-----KNHKTLSKCNGCKRPAFGLMYR 459 (475)
Q Consensus 397 ~~d~~p~~~~~~~----------~~~~~~~-~~~~~-~~~~~~~~~~~h~l~~-----~~~~~~~~c~~c~~~~~~~~~~ 459 (475)
+.||+|+|+|... -+++.|. ..+.+ +..++|+...++.+++ ++|..+++|.+-++|-....-.
T Consensus 2 ~~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVP 81 (151)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCS
T ss_pred cceeeeeEEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCc
Confidence 5688999876321 1222232 12333 5788999888888885 4567789999988887655555
Q ss_pred cccCCCCCCcC
Q 041815 460 CELCNFNLHIP 470 (475)
Q Consensus 460 ~~~~~~~~~~~ 470 (475)
.-+..|++...
T Consensus 82 ~IeVtf~iD~n 92 (151)
T 3dqg_A 82 QVEVTFDIDAN 92 (151)
T ss_dssp CEEEEEEECTT
T ss_pred EEEEEEEeccC
Confidence 45555655544
No 108
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=89.88 E-value=3.7 Score=41.10 Aligned_cols=56 Identities=11% Similarity=0.076 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHcCCc--eeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEE
Q 041815 156 DSQRQATKDAGAMAGLN--VLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLT 215 (475)
Q Consensus 156 ~~~r~~l~~a~~~agl~--~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~ 215 (475)
..-.+.++++.+.-|++ ++.++|+..|++++..+.. ....+-+=+|-|+=-..+..
T Consensus 185 ~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~----~~~~iglIlGTG~N~~y~e~ 242 (485)
T 3o8m_A 185 HDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD----PQTKMGIIIGTGVNGAYYDV 242 (485)
T ss_dssp SBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC----TTEEEEEEESSSEEEEEEEE
T ss_pred ccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCC----CCcEEEEEEecCcceEEEee
Confidence 44577889999888885 4789999999999877653 45666666787765444444
No 109
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=89.63 E-value=0.87 Score=43.73 Aligned_cols=74 Identities=15% Similarity=0.211 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCcccccCC----CCcchhhchHHHHHHH
Q 041815 308 ELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNI----NPDEAVAYGAAVQAAV 383 (475)
Q Consensus 308 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~----~p~~ava~Gaa~~a~~ 383 (475)
++..-+.+-+...|.+.++... ..++.|+++||+++.|.+.++|++.+++.++.... +|+.-=|..-|++|..
T Consensus 260 Dv~ATLt~~TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~ 336 (371)
T 3qbx_A 260 DIQATLLELSARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHR 336 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHH
Confidence 3444444445555555555432 13679999999999999999999999766554433 4554445566677654
Q ss_pred H
Q 041815 384 L 384 (475)
Q Consensus 384 ~ 384 (475)
.
T Consensus 337 ~ 337 (371)
T 3qbx_A 337 F 337 (371)
T ss_dssp H
T ss_pred H
Confidence 3
No 110
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=89.07 E-value=3.5 Score=37.64 Aligned_cols=45 Identities=22% Similarity=0.361 Sum_probs=29.4
Q ss_pred cCCceeeeeechHHHHHHhhhccCCCCC-ceEEEEEeCCCceEEEEEE
Q 041815 169 AGLNVLKIISEPTAAAIAYGLDRKATSE-KNVLIFDLGGGTFDVSLLT 215 (475)
Q Consensus 169 agl~~~~~i~Ep~Aaa~~~~~~~~~~~~-~~vlvvD~Gggt~dvsv~~ 215 (475)
.|++ +.+.++..|+|++.......... ..++++-+|.| .-..++.
T Consensus 114 ~~~p-V~v~NDanaaalaE~~~g~~~~~~~~~~~l~~GtG-IG~giv~ 159 (267)
T 1woq_A 114 LGRP-VEVINDADAAGLAEARYGAGAGVKGTVLVITLGTG-IGSAFIF 159 (267)
T ss_dssp HTSC-EEEEEHHHHHHHHHHHHSTTTTCCSEEEEEEESSS-EEEEEEE
T ss_pred HCCC-EEEeehhHHHHHHHHHhCCCCCCCCcEEEEEECcc-eEEEEEE
Confidence 4665 78999999999986543322212 35778888877 5555543
No 111
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=88.02 E-value=1.9 Score=44.84 Aligned_cols=66 Identities=17% Similarity=0.157 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCcccccCC---CCcchhhchHHHHHHH
Q 041815 313 LFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNI---NPDEAVAYGAAVQAAV 383 (475)
Q Consensus 313 ~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~---~p~~ava~Gaa~~a~~ 383 (475)
+++.+.+.+.++.+.. .++.|+|+||.+....+++.+.+.+.+.++..+. -.|.++++|.|+.|+.
T Consensus 583 la~~L~~~~~ra~~~~-----g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 583 LAQGFAALMREQATMR-----GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp HHHHHHHHHHHHHHTT-----TCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-----CCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 3444455555555553 3579999999999999999999987555554432 3388999999998754
No 112
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=87.59 E-value=0.36 Score=49.12 Aligned_cols=27 Identities=26% Similarity=0.325 Sum_probs=19.0
Q ss_pred CCCCCCCCEEEEecCCccEEEEEEECC
Q 041815 1 MDGKEAAPAIGIDLGTTYSCVGVWQHD 27 (475)
Q Consensus 1 M~~~~~~~vvGIDlGTt~s~va~~~~g 27 (475)
|+...++.++|||+|||++++++.+..
T Consensus 1 ~~~~~~~~~lgIDiGtts~k~~l~d~~ 27 (508)
T 3ifr_A 1 MSLAQGRQVIGLDIGTTSTIAILVRLP 27 (508)
T ss_dssp ------CEEEEEEECSSEEEEEEEETT
T ss_pred CCcccCCEEEEEEecCcceEEEEECCC
Confidence 665667899999999999999999644
No 113
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=86.29 E-value=1.5 Score=42.13 Aligned_cols=73 Identities=16% Similarity=0.195 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcCCcccccC----CCCcchhhchHHHHHHH
Q 041815 308 ELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKN----INPDEAVAYGAAVQAAV 383 (475)
Q Consensus 308 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~----~~p~~ava~Gaa~~a~~ 383 (475)
++..-+.+-+...|.+.++... ..+.|+++||+++.|.+.++|++.+++.++... .+|+.-=|..-|++|..
T Consensus 267 Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aFA~LA~~ 342 (370)
T 3cqy_A 267 DIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAFAWLAMR 342 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHHHHHHHH
Confidence 4555555555566666665532 356999999999999999999999976555332 24553334445666653
Q ss_pred H
Q 041815 384 L 384 (475)
Q Consensus 384 ~ 384 (475)
.
T Consensus 343 ~ 343 (370)
T 3cqy_A 343 Y 343 (370)
T ss_dssp H
T ss_pred H
Confidence 3
No 114
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=86.28 E-value=2.3 Score=45.29 Aligned_cols=63 Identities=17% Similarity=0.228 Sum_probs=46.6
Q ss_pred HHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcC--CcccccCCC---CcchhhchHHHHHHHH
Q 041815 317 CIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFN--GKRLCKNIN---PDEAVAYGAAVQAAVL 384 (475)
Q Consensus 317 i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~--~~~v~~~~~---p~~ava~Gaa~~a~~~ 384 (475)
+.+.+.++.+..+ ++.|+|+||.+....+++.+.+.+. |.++..+.. -|..+|+|.|++|+..
T Consensus 693 L~~~~~~a~~~tg-----~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~ 760 (772)
T 4g9i_A 693 FAHTAVERAREFG-----VKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLY 760 (772)
T ss_dssp HHHHHHHHHHTTT-----CSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-----cCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHH
Confidence 4455556655533 6789999999999999999999874 445554432 3889999999987654
No 115
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=85.76 E-value=0.23 Score=41.57 Aligned_cols=76 Identities=12% Similarity=0.020 Sum_probs=46.2
Q ss_pred EEecccCCCCccc----------ccccccc-cccCC-CCCCCCCccccccceec-----cCcccccccccCCCCCCceee
Q 041815 397 ILDVNPNYNSPLE----------LKTTTSF-AAQNL-PSRGGHKSHQAHDLQLK-----NHKTLSKCNGCKRPAFGLMYR 459 (475)
Q Consensus 397 ~~d~~p~~~~~~~----------~~~~~~~-~~~~~-~~~~~~~~~~~h~l~~~-----~~~~~~~c~~c~~~~~~~~~~ 459 (475)
++|++|+|+|... -++..|. ..+.+ +..++|+...++.+++. +|..++.+..-++|.....-.
T Consensus 2 v~Dv~p~slGi~~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~ 81 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ceEeecccEEEEEeCCEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCc
Confidence 5688888866321 1122222 12223 57788998888888854 466778888887876554445
Q ss_pred cccCCCCCCcCCC
Q 041815 460 CELCNFNLHIPCM 472 (475)
Q Consensus 460 ~~~~~~~~~~~~~ 472 (475)
+-+..|++....-
T Consensus 82 ~I~V~f~id~nGi 94 (152)
T 2op6_A 82 QIEVTFEIDVNGI 94 (152)
T ss_dssp CEEEEEEECTTSC
T ss_pred eEEEEEEECCCcE
Confidence 5566676665543
No 116
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=85.03 E-value=8.7 Score=36.95 Aligned_cols=46 Identities=24% Similarity=0.323 Sum_probs=30.5
Q ss_pred HcCCceeeeeechHHHHHHhhhcc-------------CCCCCceEEEEEeCCCceEEEEEE
Q 041815 168 MAGLNVLKIISEPTAAAIAYGLDR-------------KATSEKNVLIFDLGGGTFDVSLLT 215 (475)
Q Consensus 168 ~agl~~~~~i~Ep~Aaa~~~~~~~-------------~~~~~~~vlvvD~Gggt~dvsv~~ 215 (475)
..|++ +.+.|+..|+|++-.... .....++++++-+|.| .-.+++.
T Consensus 107 ~~g~P-V~veNDanaaAlgE~~~G~~p~~~~~l~~~g~~~~~~~~v~l~lGtG-IG~givi 165 (366)
T 3mcp_A 107 IFGIP-VFINNDGSLFAYGEALTGVLPEINRRLREAGSTKRYKNLLGVTLGTG-FGAGVVI 165 (366)
T ss_dssp HHCSC-EEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCCCEEEEEEESSS-EEEEEEE
T ss_pred HHCCC-EEEechhhHHHHHHHHhCCCcccccccccccccCCCCcEEEEEECCc-ceEEEEE
Confidence 34776 689999999999865433 2223567888888876 3344443
No 117
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=83.05 E-value=0.37 Score=43.33 Aligned_cols=50 Identities=14% Similarity=0.109 Sum_probs=35.1
Q ss_pred CCCCCCCccccccceec-----cCcccccccccCCCCCCceeecccCCCCCCcCC
Q 041815 422 PSRGGHKSHQAHDLQLK-----NHKTLSKCNGCKRPAFGLMYRCELCNFNLHIPC 471 (475)
Q Consensus 422 ~~~~~~~~~~~h~l~~~-----~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~ 471 (475)
+..++|+...+|.+++. +|..+++|.+-++|.....-...+..|+|....
T Consensus 37 t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~I~Vtf~iD~nG 91 (227)
T 1u00_A 37 TFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAHIRVTFQVDADG 91 (227)
T ss_dssp CSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSCEEEEEEECTTC
T ss_pred ecCCCceEEEEEEEecCCccCCCCCEEEEEEEeCCCCCCCCceEEEEEEEECCCC
Confidence 46788888888988864 566778999988886654444445666665543
No 118
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=82.71 E-value=2.2 Score=45.28 Aligned_cols=67 Identities=21% Similarity=0.240 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHcC--CcccccCC-C--CcchhhchHHHHHHHHcC
Q 041815 315 RKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFFN--GKRLCKNI-N--PDEAVAYGAAVQAAVLSG 386 (475)
Q Consensus 315 ~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~~--~~~v~~~~-~--p~~ava~Gaa~~a~~~~~ 386 (475)
+.+.+.+.++.+..+ ++.|+|+||.+....+++.+.+.+. +.++..+. - .|.++|+|.|++|+...+
T Consensus 679 ~~L~~~~~~a~~~~g-----~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~~ 750 (761)
T 3vth_A 679 NFTYDLANLIRKETG-----INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKILE 750 (761)
T ss_dssp HHHHHHHHHHHHHHC-----CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhC-----CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHhc
Confidence 334444445554433 5799999999999999999998862 44554432 2 388999999998876554
No 119
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=82.36 E-value=0.68 Score=46.70 Aligned_cols=23 Identities=39% Similarity=0.593 Sum_probs=16.7
Q ss_pred CCCCCEEEEecCCccEEEEEEEC
Q 041815 4 KEAAPAIGIDLGTTYSCVGVWQH 26 (475)
Q Consensus 4 ~~~~~vvGIDlGTt~s~va~~~~ 26 (475)
.++++++|||+|||++++++.+.
T Consensus 3 ~mm~~~lgIDiGTts~Ka~l~d~ 25 (482)
T 3h6e_A 3 LSTGATIVIDLGKTLSKVSLWDL 25 (482)
T ss_dssp -----CEEEEECSSEEEEEEECT
T ss_pred hhhceEEEEEcCCCCeEEEEEEC
Confidence 34578999999999999999863
No 120
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=81.78 E-value=3.7 Score=40.84 Aligned_cols=56 Identities=13% Similarity=0.134 Sum_probs=39.7
Q ss_pred CHHHHHHHHHHHHHcCCc--eeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEE
Q 041815 155 TDSQRQATKDAGAMAGLN--VLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLL 214 (475)
Q Consensus 155 ~~~~r~~l~~a~~~agl~--~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~ 214 (475)
...-++.++++.+..|++ ++.++|+..|++++-.+.. ...++-+=+|-|+=-.-+.
T Consensus 171 g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~----~~~~iglIlGTG~na~yve 228 (451)
T 1bdg_A 171 GHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALED----PKCAVGLIVGTGTNVAYIE 228 (451)
T ss_dssp TSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTC----TTEEEEEEESSSEEEEEEE
T ss_pred CCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccC----CCcEEEEEEeCCcceEEEE
Confidence 345578888888877875 3589999999998877663 4566777788875433333
No 121
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=80.97 E-value=27 Score=33.89 Aligned_cols=46 Identities=15% Similarity=0.290 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCC-CcHHHHHHHHHHc
Q 041815 309 LNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSA-RIPKVQQLLQEFF 358 (475)
Q Consensus 309 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s-~~p~v~~~l~~~~ 358 (475)
+++-...++...|-..... + ..+|.|+++||-+ +.+.+++.+.+.+
T Consensus 309 A~d~f~yri~k~IGa~aa~--L--ggvDaIVFTgGIGEns~~vR~~i~~~l 355 (415)
T 2e1z_A 309 AIKTFVHRIARHIAGHAAS--L--HRLDGIIFTGGIGENSVLIRQLVIEHL 355 (415)
T ss_dssp HHHHHHHHHHHHHHHHHTT--C--SSCCEEEEEHHHHHHCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHH--h--CCCCEEEECccccccCHHHHHHHHhhH
Confidence 3344444555555444333 2 4589999999999 9999999999866
No 122
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=80.50 E-value=7.5 Score=42.39 Aligned_cols=55 Identities=9% Similarity=0.156 Sum_probs=38.5
Q ss_pred CHHHHHHHHHHHHHc-CC--ceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEE
Q 041815 155 TDSQRQATKDAGAMA-GL--NVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSL 213 (475)
Q Consensus 155 ~~~~r~~l~~a~~~a-gl--~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv 213 (475)
...-.+.++++...- ++ +++.++|+..|++++..+.. ....+-+=+|-|+=-..+
T Consensus 630 g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~----~~~~iglIlGTG~na~y~ 687 (917)
T 1cza_N 630 GHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEE----PTCEVGLIVGTGSNACYM 687 (917)
T ss_dssp TSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTC----TTEEEEEEESSSEEEEEE
T ss_pred CCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCC----CCcEEEEEEeCCeeEEEE
Confidence 444577788887643 44 68999999999988876663 456666777887644433
No 123
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=80.28 E-value=1.2 Score=45.35 Aligned_cols=23 Identities=26% Similarity=0.199 Sum_probs=19.3
Q ss_pred CCCCCCCCEEEEecCCccEEEEEEE
Q 041815 1 MDGKEAAPAIGIDLGTTYSCVGVWQ 25 (475)
Q Consensus 1 M~~~~~~~vvGIDlGTt~s~va~~~ 25 (475)
|+ .+++++|||+|||++++++.+
T Consensus 1 m~--~~~~~lgIDiGtts~ka~l~d 23 (515)
T 3i8b_A 1 MS--LRTLVAGVDTSTQSCKVRVTD 23 (515)
T ss_dssp -C--CSCEEEEEEECSSEEEEEEEE
T ss_pred CC--CCcEEEEEEeccccEEEEEEE
Confidence 64 346899999999999999997
No 124
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=80.08 E-value=1.1 Score=46.03 Aligned_cols=22 Identities=36% Similarity=0.560 Sum_probs=19.2
Q ss_pred CCCEEEEecCCccEEEEEEECC
Q 041815 6 AAPAIGIDLGTTYSCVGVWQHD 27 (475)
Q Consensus 6 ~~~vvGIDlGTt~s~va~~~~g 27 (475)
+++++|||+|||++++++.+..
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~ 25 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFDLQ 25 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEETT
T ss_pred CcEEEEEEECcccEEEEEECCC
Confidence 5689999999999999998643
No 125
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=79.95 E-value=1.1 Score=45.48 Aligned_cols=21 Identities=24% Similarity=0.132 Sum_probs=18.8
Q ss_pred CCCEEEEecCCccEEEEEEEC
Q 041815 6 AAPAIGIDLGTTYSCVGVWQH 26 (475)
Q Consensus 6 ~~~vvGIDlGTt~s~va~~~~ 26 (475)
|+.++|||+|||++++++.+.
T Consensus 4 m~~~lgIDiGtts~k~~l~d~ 24 (511)
T 3hz6_A 4 AFYIATFDIGTTEVKAALADR 24 (511)
T ss_dssp CCEEEEEEECSSEEEEEEECT
T ss_pred ccEEEEEEeCCCceEEEEECC
Confidence 568999999999999999853
No 126
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=78.94 E-value=2.3 Score=40.78 Aligned_cols=20 Identities=25% Similarity=0.561 Sum_probs=17.3
Q ss_pred CceEEEEEeCCCceEEEEEE
Q 041815 196 EKNVLIFDLGGGTFDVSLLT 215 (475)
Q Consensus 196 ~~~vlvvD~Gggt~dvsv~~ 215 (475)
.++++|+|+|||+|.++...
T Consensus 139 ~~t~~v~DiGGGStei~~~~ 158 (353)
T 3aap_A 139 NKSVGVMDMGGASVQIVFPM 158 (353)
T ss_dssp SSCEEEEEECSSEEEEEEEC
T ss_pred cccEEEEEeCCCceEEEEec
Confidence 35799999999999999873
No 127
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=78.91 E-value=1.2 Score=47.03 Aligned_cols=42 Identities=21% Similarity=0.667 Sum_probs=34.4
Q ss_pred cccceeccCcccccccccCCCCCC---ceeecccCCCCCCcCCCC
Q 041815 432 AHDLQLKNHKTLSKCNGCKRPAFG---LMYRCELCNFNLHIPCMF 473 (475)
Q Consensus 432 ~h~l~~~~~~~~~~c~~c~~~~~~---~~~~~~~~~~~~~~~~~~ 473 (475)
.|.+...+-..+-.||.|+..=.| -.|+|..|.+..|..|+-
T Consensus 102 ~h~~~~~~~~~~~~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~ 146 (674)
T 3pfq_A 102 KHKFKIHTYSSPTFCDHCGSLLYGLIHQGMKCDTCMMNVHKRCVM 146 (674)
T ss_dssp CCCCCEECCSSCCCCSSSCSCCBBSSSCEECCSSSCCCBCSSTTS
T ss_pred CcceeecCCCCCCCCCccccccchhhcCccccccCCcchhhhhhh
Confidence 477777777777899999887333 689999999999999975
No 128
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=78.69 E-value=1.2 Score=45.50 Aligned_cols=22 Identities=36% Similarity=0.368 Sum_probs=18.7
Q ss_pred CCCCEEEEecCCccEEEEEEEC
Q 041815 5 EAAPAIGIDLGTTYSCVGVWQH 26 (475)
Q Consensus 5 ~~~~vvGIDlGTt~s~va~~~~ 26 (475)
++++++|||+|||++++++++.
T Consensus 2 ekkYvlgID~GTss~Ka~l~d~ 23 (526)
T 3ezw_A 2 EKKYIVALDQGTTSSRAVVMDH 23 (526)
T ss_dssp -CCEEEEEEECSSEEEEEEECT
T ss_pred CceEEEEEEccccceeeeEEcC
Confidence 3578999999999999999853
No 129
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=77.86 E-value=1.3 Score=44.80 Aligned_cols=22 Identities=27% Similarity=0.341 Sum_probs=19.0
Q ss_pred CCCEEEEecCCccEEEEEEECC
Q 041815 6 AAPAIGIDLGTTYSCVGVWQHD 27 (475)
Q Consensus 6 ~~~vvGIDlGTt~s~va~~~~g 27 (475)
++.++|||+|||++++++.+..
T Consensus 3 m~~~lgIDiGtts~K~~l~d~~ 24 (504)
T 3ll3_A 3 LKYIIGMDVGTTATKGVLYDIN 24 (504)
T ss_dssp CEEEEEEEECSSEEEEEEEETT
T ss_pred CCEEEEEEecCCceEEEEEcCC
Confidence 4589999999999999998643
No 130
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=77.63 E-value=1.6 Score=44.42 Aligned_cols=20 Identities=30% Similarity=0.303 Sum_probs=17.9
Q ss_pred CCEEEEecCCccEEEEEEEC
Q 041815 7 APAIGIDLGTTYSCVGVWQH 26 (475)
Q Consensus 7 ~~vvGIDlGTt~s~va~~~~ 26 (475)
+.++|||+|||++++++.+.
T Consensus 26 ~~~lgIDiGtts~k~~l~d~ 45 (520)
T 4e1j_A 26 GYILAIDQGTTSTRAIVFDG 45 (520)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred CeEEEEEeCCcceEEEEECC
Confidence 57999999999999999853
No 131
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=77.06 E-value=1.9 Score=32.95 Aligned_cols=20 Identities=15% Similarity=0.167 Sum_probs=17.4
Q ss_pred CEEEEecCCccEEEEEEECC
Q 041815 8 PAIGIDLGTTYSCVGVWQHD 27 (475)
Q Consensus 8 ~vvGIDlGTt~s~va~~~~g 27 (475)
.++|||+|+..+.+|+.+..
T Consensus 2 riLglD~G~kriGvAvsd~~ 21 (98)
T 1iv0_A 2 RVGALDVGEARIGLAVGEEG 21 (98)
T ss_dssp CEEEEEESSSEEEEEEECSC
T ss_pred cEEEEEeCCCEEEEEEEeCC
Confidence 48999999999999987654
No 132
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=76.89 E-value=1.7 Score=43.98 Aligned_cols=22 Identities=27% Similarity=0.336 Sum_probs=19.1
Q ss_pred CCCEEEEecCCccEEEEEEECC
Q 041815 6 AAPAIGIDLGTTYSCVGVWQHD 27 (475)
Q Consensus 6 ~~~vvGIDlGTt~s~va~~~~g 27 (475)
++.++|||+|||++++++.+..
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~~ 25 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDRN 25 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEETT
T ss_pred CCEEEEEEcCCCceEEEEECCC
Confidence 4689999999999999998643
No 133
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=76.16 E-value=45 Score=32.79 Aligned_cols=53 Identities=17% Similarity=0.254 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHcC---CceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEE
Q 041815 157 SQRQATKDAGAMAG---LNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSL 213 (475)
Q Consensus 157 ~~r~~l~~a~~~ag---l~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv 213 (475)
.-.+.+++|.+.-+ ++++.++|+.+|+.++..+.. +...+-+=+|-||=-..+
T Consensus 161 dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~----~~~~iglIlGTGtNa~y~ 216 (445)
T 3hm8_A 161 DVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYED----PRCEIGLIVGTGTNACYM 216 (445)
T ss_dssp BHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTC----TTEEEEEEESSSEEEEEE
T ss_pred cHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCC----CCceEEEEEeCCceEEEE
Confidence 34677888887653 567899999999998876543 345555667777544433
No 134
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=75.61 E-value=12 Score=37.20 Aligned_cols=49 Identities=16% Similarity=0.246 Sum_probs=30.3
Q ss_pred CceEEEEEeCCCceEEEEEEEeC--------------CeEEEEEEcCCCCCchhHHHHHHHHHH
Q 041815 196 EKNVLIFDLGGGTFDVSLLTIEK--------------GIFKVKATAGDTHLGGEDFDNRMVNHF 245 (475)
Q Consensus 196 ~~~vlvvD~Gggt~dvsv~~~~~--------------~~~~v~~~~~~~~~GG~~id~~l~~~l 245 (475)
...++|+|+|||+|.++...-.. ..+.+..++. ..+|-+..-+++...+
T Consensus 189 ~~t~gvlDlGGgStqi~~~~~~~~~~~~~~~~l~l~g~~y~lY~hS~-LgyG~~~Ar~~~l~~l 251 (456)
T 3cj1_A 189 KGTLGAMDLGGASTQITFETTSPSEDPGNEVHLRLYGQHYRVYTHSF-LCYGRDQILLRLLASA 251 (456)
T ss_dssp CCCCEEEEECSSEEEEEEECCSCCSCGGGEEEEEETTEEEEEEEEEE-ETCSHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCceEEEeccCCccCCCCceEEEEeCCeeEEEEEEec-ccchHHHHHHHHHHHH
Confidence 45689999999999998764321 1344445544 4567655544444433
No 135
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=75.22 E-value=1.8 Score=43.98 Aligned_cols=21 Identities=33% Similarity=0.328 Sum_probs=18.6
Q ss_pred CCCEEEEecCCccEEEEEEEC
Q 041815 6 AAPAIGIDLGTTYSCVGVWQH 26 (475)
Q Consensus 6 ~~~vvGIDlGTt~s~va~~~~ 26 (475)
+++++|||+|||++++++.+.
T Consensus 2 ~~~~lgIDiGtts~k~~l~d~ 22 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMDH 22 (510)
T ss_dssp CCEEEEEEECSSEEEEEEECT
T ss_pred CcEEEEEEcCCcceEEEEECC
Confidence 468999999999999999853
No 136
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=74.43 E-value=1.9 Score=44.45 Aligned_cols=21 Identities=24% Similarity=0.275 Sum_probs=18.4
Q ss_pred CCCEEEEecCCccEEEEEEEC
Q 041815 6 AAPAIGIDLGTTYSCVGVWQH 26 (475)
Q Consensus 6 ~~~vvGIDlGTt~s~va~~~~ 26 (475)
++++||||+|||++++++.+.
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEecCCcceEEEEEEC
Confidence 468999999999999999964
No 137
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=74.24 E-value=3.1 Score=33.94 Aligned_cols=21 Identities=29% Similarity=0.262 Sum_probs=18.8
Q ss_pred CCEEEEecCCccEEEEEEECC
Q 041815 7 APAIGIDLGTTYSCVGVWQHD 27 (475)
Q Consensus 7 ~~vvGIDlGTt~s~va~~~~g 27 (475)
..++|||+|+..+.+|+.++.
T Consensus 3 ~~iLglD~G~kriGvAvsd~~ 23 (138)
T 1nu0_A 3 GTLMAFDFGTKSIGVAVGQRI 23 (138)
T ss_dssp CEEEEEECCSSEEEEEEEETT
T ss_pred CeEEEEEeCCCEEEEEEEcCC
Confidence 469999999999999998765
No 138
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=73.04 E-value=2.3 Score=43.49 Aligned_cols=22 Identities=18% Similarity=0.128 Sum_probs=19.1
Q ss_pred CCCEEEEecCCccEEEEEEECC
Q 041815 6 AAPAIGIDLGTTYSCVGVWQHD 27 (475)
Q Consensus 6 ~~~vvGIDlGTt~s~va~~~~g 27 (475)
+++++|||+|||.+++.+++..
T Consensus 9 ~~~~lgID~GTts~Ka~l~d~~ 30 (538)
T 4bc3_A 9 RRCCLGWDFSTQQVKVVAVDAE 30 (538)
T ss_dssp CCEEEEEEECSSEEEEEEEETT
T ss_pred CCEEEEEEEcCcCEEEEEECCC
Confidence 4689999999999999998643
No 139
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=72.98 E-value=21 Score=38.84 Aligned_cols=54 Identities=15% Similarity=0.264 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHcC-C--ceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEE
Q 041815 157 SQRQATKDAGAMAG-L--NVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLT 215 (475)
Q Consensus 157 ~~r~~l~~a~~~ag-l--~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~ 215 (475)
.-++.+.++....| + .++.++|+..|++++-.+.. ...++.+=+|-|+=- +++.
T Consensus 184 ~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~~----~~~~iglilGTGvng-g~i~ 240 (917)
T 1cza_N 184 DVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDD----QHCEVGLIIGTGTNA-CYME 240 (917)
T ss_dssp BHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHHC----TTEEEEEEESSSEEE-EEEE
T ss_pred chHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhccC----CCcEEEEEEECCcce-EEEe
Confidence 45677777777655 5 47899999999999876662 457777778888543 3443
No 140
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=72.17 E-value=2.1 Score=41.98 Aligned_cols=42 Identities=29% Similarity=0.646 Sum_probs=32.9
Q ss_pred ccccceeccCcccccccccCCCCCC---ceeecccCCCCCCcCCC
Q 041815 431 QAHDLQLKNHKTLSKCNGCKRPAFG---LMYRCELCNFNLHIPCM 472 (475)
Q Consensus 431 ~~h~l~~~~~~~~~~c~~c~~~~~~---~~~~~~~~~~~~~~~~~ 472 (475)
..|.++...-..+-.|+.|+..-.| .+|.|..|.+..|..|.
T Consensus 345 ~~h~f~~~~~~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~ 389 (406)
T 2vrw_B 345 NGHDFQMFSFEETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECL 389 (406)
T ss_dssp GGCCEEEECCSSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGG
T ss_pred CCCCCccccCCCCCCCccccchhceeCCCCCCCCCCcCccchhhh
Confidence 3466665554555789999988544 78999999999999996
No 141
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=71.02 E-value=15 Score=36.80 Aligned_cols=18 Identities=44% Similarity=0.464 Sum_probs=16.2
Q ss_pred EEEEecCCccEEEEEEEC
Q 041815 9 AIGIDLGTTYSCVGVWQH 26 (475)
Q Consensus 9 vvGIDlGTt~s~va~~~~ 26 (475)
++|||+|||++++++.+.
T Consensus 2 ~lgiDiGtt~~k~~l~d~ 19 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNE 19 (484)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEEecCcccEEEEECC
Confidence 699999999999998853
No 142
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=70.94 E-value=2.6 Score=42.65 Aligned_cols=20 Identities=30% Similarity=0.311 Sum_probs=18.0
Q ss_pred CCEEEEecCCccEEEEEEEC
Q 041815 7 APAIGIDLGTTYSCVGVWQH 26 (475)
Q Consensus 7 ~~vvGIDlGTt~s~va~~~~ 26 (475)
++++|||+|||++++++.+.
T Consensus 6 ~~~lgIDiGtts~k~~l~d~ 25 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFNQ 25 (501)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred cEEEEEEeCccceEEEEEcC
Confidence 58999999999999999853
No 143
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=70.02 E-value=2.7 Score=42.37 Aligned_cols=20 Identities=30% Similarity=0.258 Sum_probs=17.4
Q ss_pred CCEEEEecCCccEEEEEEEC
Q 041815 7 APAIGIDLGTTYSCVGVWQH 26 (475)
Q Consensus 7 ~~vvGIDlGTt~s~va~~~~ 26 (475)
+.++|||+|||++++++.+.
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~ 21 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTL 21 (495)
T ss_dssp -CEEEEEECSSEEEEEEECT
T ss_pred cEEEEEeeCCcceEEEEECC
Confidence 47999999999999999854
No 144
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=69.49 E-value=2.3 Score=42.75 Aligned_cols=20 Identities=20% Similarity=0.280 Sum_probs=17.8
Q ss_pred CCCEEEEecCCccEEEEEEE
Q 041815 6 AAPAIGIDLGTTYSCVGVWQ 25 (475)
Q Consensus 6 ~~~vvGIDlGTt~s~va~~~ 25 (475)
++.++|||+|||++++++.+
T Consensus 3 ~~~~lgiDiGtts~k~~l~d 22 (489)
T 2uyt_A 3 FRNCVAVDLGASSGRVMLAR 22 (489)
T ss_dssp CEEEEEEEECSSEEEEEEEE
T ss_pred cceEEEEEecCCCceEEEEE
Confidence 45799999999999999985
No 145
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=69.39 E-value=2.6 Score=34.93 Aligned_cols=21 Identities=29% Similarity=0.349 Sum_probs=18.0
Q ss_pred CCEEEEecCCccEEEEEEECC
Q 041815 7 APAIGIDLGTTYSCVGVWQHD 27 (475)
Q Consensus 7 ~~vvGIDlGTt~s~va~~~~g 27 (475)
+.++|||+|+..+.+|+.+..
T Consensus 3 mriLGiDpG~~riGvAv~d~~ 23 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDEM 23 (150)
T ss_dssp EEEEEEEECSSEEEEEEECTT
T ss_pred CEEEEEEccCCEEEEEEEECC
Confidence 469999999999999988643
No 146
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=69.06 E-value=3 Score=42.10 Aligned_cols=20 Identities=20% Similarity=0.272 Sum_probs=18.0
Q ss_pred CCEEEEecCCccEEEEEEEC
Q 041815 7 APAIGIDLGTTYSCVGVWQH 26 (475)
Q Consensus 7 ~~vvGIDlGTt~s~va~~~~ 26 (475)
+.++|||+|||++++++.+.
T Consensus 3 ~~~lgiDiGtt~~k~~l~d~ 22 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFDR 22 (497)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred cEEEEEecCCchhEEEEECC
Confidence 57999999999999999864
No 147
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=68.70 E-value=2.9 Score=42.27 Aligned_cols=21 Identities=19% Similarity=0.216 Sum_probs=18.3
Q ss_pred CCEEEEecCCccEEEEEEECC
Q 041815 7 APAIGIDLGTTYSCVGVWQHD 27 (475)
Q Consensus 7 ~~vvGIDlGTt~s~va~~~~g 27 (475)
+.++|||+|||++++++.+..
T Consensus 4 ~~~lgIDiGtT~~k~~l~d~~ 24 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFYDEE 24 (503)
T ss_dssp EEEEEEEECSSEEEEEEEETT
T ss_pred cEEEEEEeCCcceEEEEECCC
Confidence 478999999999999998643
No 148
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=68.51 E-value=21 Score=35.38 Aligned_cols=52 Identities=15% Similarity=0.213 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHcC---CceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEE
Q 041815 156 DSQRQATKDAGAMAG---LNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDV 211 (475)
Q Consensus 156 ~~~r~~l~~a~~~ag---l~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dv 211 (475)
..-.+.+++|.+.-| ++++.++|+.+|..++..+.. +...+=+=+|-||=-+
T Consensus 184 ~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~----~~~~iGlI~GTGtNa~ 238 (470)
T 3f9m_A 184 NNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYED----HQCEVGMIVGTGCNAC 238 (470)
T ss_dssp SBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTC----TTEEEEEEESSSEEEE
T ss_pred ccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCC----CCceEEEEEecCCceE
Confidence 345788888988877 468889999999888776653 3344555567776533
No 149
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=68.13 E-value=3.8 Score=37.58 Aligned_cols=21 Identities=29% Similarity=0.433 Sum_probs=18.9
Q ss_pred CEEEEecCCccEEEEEEECCc
Q 041815 8 PAIGIDLGTTYSCVGVWQHDR 28 (475)
Q Consensus 8 ~vvGIDlGTt~s~va~~~~g~ 28 (475)
.+++||+|.|+++.+++++++
T Consensus 3 MlL~IDIGNT~iK~gl~d~~~ 23 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDGDE 23 (266)
T ss_dssp CEEEEEECSSEEEEEEEETTE
T ss_pred eEEEEEECCCeEEEEEEECCE
Confidence 689999999999999998763
No 150
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=65.27 E-value=3.1 Score=42.92 Aligned_cols=33 Identities=24% Similarity=0.354 Sum_probs=26.2
Q ss_pred CCEEEEecCCccEEEEEEECCcEEEEecCCCCcccceEEEEc
Q 041815 7 APAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT 48 (475)
Q Consensus 7 ~~vvGIDlGTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~ 48 (475)
..+|-|.-|+.|.+++.+.+--|.+| |.+||..
T Consensus 40 ~~~IVIHpGS~~lRIG~AsD~~P~~i---------p~~iA~~ 72 (655)
T 4am6_A 40 TATIVIHPGSNSIKIGFPKDDHPVVV---------PNCVAVP 72 (655)
T ss_dssp GGEEEEECCSSEEEEECTTSSSCEEE---------ESCEEEE
T ss_pred CCeEEEcCCCcceeeeecCCCCCccc---------ceeEEec
Confidence 57899999999999998877766666 6666653
No 151
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=65.05 E-value=3.5 Score=42.53 Aligned_cols=43 Identities=26% Similarity=0.568 Sum_probs=34.0
Q ss_pred ccccceeccCcccccccccCCC--CC-CceeecccCCCCCCcCCCC
Q 041815 431 QAHDLQLKNHKTLSKCNGCKRP--AF-GLMYRCELCNFNLHIPCMF 473 (475)
Q Consensus 431 ~~h~l~~~~~~~~~~c~~c~~~--~~-~~~~~~~~~~~~~~~~~~~ 473 (475)
..|.++...-..+-.|+.|+.. |- -.+|.|..|.|..|..|.-
T Consensus 517 ~~H~F~~~~~~~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~ 562 (587)
T 3ky9_A 517 NGHDFQMFSFEETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLG 562 (587)
T ss_dssp GGCCEEEECCSSCCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGG
T ss_pred cCCceeEEeCCCCcccccccccccccccCCcCCCCCCCccchhhhh
Confidence 3577776665556799999987 43 4789999999999999973
No 152
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=64.88 E-value=83 Score=30.10 Aligned_cols=47 Identities=13% Similarity=0.160 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCC-CcHHHHHHHHHHcC
Q 041815 309 LNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSA-RIPKVQQLLQEFFN 359 (475)
Q Consensus 309 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s-~~p~v~~~l~~~~~ 359 (475)
+++-...++...|-..... +. .+|.|+++||-+ ..+.+++.+.+.+.
T Consensus 292 A~d~f~yri~k~IGa~aa~--L~--gvDaIVFTgGIgEns~~iR~~i~~~l~ 339 (384)
T 3khy_A 292 AIEIFSHRVAKFVASYMIY--FN--KLDALVFTGGIGENAANIRKNIISKLA 339 (384)
T ss_dssp HHHHHHHHHHHHHHHHGGG--CS--SCCEEEEEHHHHHHCHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHHHHHHHH--hC--CCCEEEECCccccCcHHHHHHHHhhcc
Confidence 3444445555555444333 22 589999999988 78999999988763
No 153
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=62.23 E-value=7.9 Score=32.31 Aligned_cols=18 Identities=33% Similarity=0.506 Sum_probs=16.4
Q ss_pred CEEEEecCCccEEEEEEE
Q 041815 8 PAIGIDLGTTYSCVGVWQ 25 (475)
Q Consensus 8 ~vvGIDlGTt~s~va~~~ 25 (475)
.++|||.|++++..++.+
T Consensus 2 ~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp EEEEEECCSSEEEEEEEE
T ss_pred EEEEEccCCCCeeEEEEE
Confidence 589999999999999884
No 154
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=61.46 E-value=2.3 Score=42.47 Aligned_cols=42 Identities=21% Similarity=0.585 Sum_probs=33.4
Q ss_pred ccccceeccCcccccccccCCCCCC---ceeecccCCCCCCcCCC
Q 041815 431 QAHDLQLKNHKTLSKCNGCKRPAFG---LMYRCELCNFNLHIPCM 472 (475)
Q Consensus 431 ~~h~l~~~~~~~~~~c~~c~~~~~~---~~~~~~~~~~~~~~~~~ 472 (475)
..|-+....-..+-.|+-|+.-=.| -.|+|..|.+..|..|+
T Consensus 208 ~~h~f~~~~~~~pt~C~~C~~~l~g~~~qg~~C~~C~~~~Hk~C~ 252 (463)
T 3cxl_A 208 KIHNFKVHTFRGPHWCEYCANFMWGLIAQGVKCADCGLNVHKQCS 252 (463)
T ss_dssp BCCCEEEECCSSCCBCTTTCCBCCSSSCCEEEETTTCCEECHHHH
T ss_pred CCcceEEeecCCCCcchhhhhhhhhHHhcCeeccccCcccccccc
Confidence 3677777776677899999876333 37999999999999996
No 155
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=59.89 E-value=2.5 Score=31.42 Aligned_cols=40 Identities=20% Similarity=0.505 Sum_probs=31.6
Q ss_pred ceeccCcccccccccCCCCCCceeeccc--CCCCCCcCCCCC
Q 041815 435 LQLKNHKTLSKCNGCKRPAFGLMYRCEL--CNFNLHIPCMFI 474 (475)
Q Consensus 435 l~~~~~~~~~~c~~c~~~~~~~~~~~~~--~~~~~~~~~~~~ 474 (475)
+-.-..++.-+|..|++.+.|-...|.. |.-..|+.||.+
T Consensus 9 ~NIp~~R~~l~C~iC~~~~~GAciqC~~~~C~~~fHv~CA~~ 50 (87)
T 2lq6_A 9 MNIPPARWKLTCYLCKQKGVGASIQCHKANCYTAFHVTCAQK 50 (87)
T ss_dssp CCCCCCCCCCCBTTTTBCCSSCEEECSCTTTCCEEEHHHHHH
T ss_pred cCCChHHhcCCCcCCCCCCCcEeEecCCCCCCCcCcHHHHHH
Confidence 3333344445999999999999999984 999999999963
No 156
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=59.45 E-value=16 Score=35.30 Aligned_cols=48 Identities=21% Similarity=0.189 Sum_probs=32.0
Q ss_pred CCCeEEEecCCCCcHH-HHHHHHHHcCC---cccccCCCCcchhhchHHHHH
Q 041815 334 SVDDVVIVGGSARIPK-VQQLLQEFFNG---KRLCKNINPDEAVAYGAAVQA 381 (475)
Q Consensus 334 ~i~~VvLvGG~s~~p~-v~~~l~~~~~~---~~v~~~~~p~~ava~Gaa~~a 381 (475)
+++.|+|.||.+..+. +.+.+.+.+.. ..+.......++.++||+..+
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~ 346 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVL 346 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHH
Confidence 4789999999986543 77777777632 123323233358899998775
No 157
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=58.73 E-value=3.2 Score=29.47 Aligned_cols=39 Identities=23% Similarity=0.611 Sum_probs=29.4
Q ss_pred ccceeccCcccccccccCCCC---CCceeecccCCCCCCcCCC
Q 041815 433 HDLQLKNHKTLSKCNGCKRPA---FGLMYRCELCNFNLHIPCM 472 (475)
Q Consensus 433 h~l~~~~~~~~~~c~~c~~~~---~~~~~~~~~~~~~~~~~~~ 472 (475)
|-.|...... ..|..|+..+ .+.+..|+.|+--.|..|-
T Consensus 7 ~~~~~~~~~~-~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl 48 (71)
T 2ku3_A 7 HHMQSLIDED-AVCSICMDGESQNSNVILFCDMCNLAVHQECY 48 (71)
T ss_dssp ---CCCCCSS-CSCSSSCCCCCCSSSCEEECSSSCCEEEHHHH
T ss_pred cccccCCCCC-CCCCCCCCCCCCCCCCEEECCCCCCccccccC
Confidence 5566666555 5899999886 4789999999999998883
No 158
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=57.19 E-value=3.5 Score=30.01 Aligned_cols=28 Identities=21% Similarity=0.616 Sum_probs=25.8
Q ss_pred ccccccCCCCCCceeecccCCCCCCcCC
Q 041815 444 SKCNGCKRPAFGLMYRCELCNFNLHIPC 471 (475)
Q Consensus 444 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~ 471 (475)
=.|..|+.-.+...|+|..|.=-.|..|
T Consensus 16 ~~C~VC~~~t~~~l~pCRvC~RvfH~~C 43 (89)
T 1wil_A 16 EMCDVCEVWTAESLFPCRVCTRVFHDGC 43 (89)
T ss_dssp CCCTTTCCCCSSCCSSCSSSSSCCCHHH
T ss_pred cccCccccccccceeccccccccccHhh
Confidence 3799999999999999999999999888
No 159
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=56.24 E-value=6.4 Score=39.69 Aligned_cols=20 Identities=40% Similarity=0.439 Sum_probs=17.6
Q ss_pred CCEEEEecCCccEEEEEEEC
Q 041815 7 APAIGIDLGTTYSCVGVWQH 26 (475)
Q Consensus 7 ~~vvGIDlGTt~s~va~~~~ 26 (475)
..++|||+|||++++++.+.
T Consensus 2 ~~~lgiDiGtts~k~~l~d~ 21 (504)
T 2d4w_A 2 DYVLAIDQGTTSSRAIVFDH 21 (504)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred CEEEEEecCCcceEEEEECC
Confidence 36899999999999999953
No 160
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=56.01 E-value=15 Score=36.36 Aligned_cols=44 Identities=25% Similarity=0.350 Sum_probs=26.7
Q ss_pred ceeeeeechHHHHHHh-----hhccCCC-CCceEEEEEeCCCceEEEEEE
Q 041815 172 NVLKIISEPTAAAIAY-----GLDRKAT-SEKNVLIFDLGGGTFDVSLLT 215 (475)
Q Consensus 172 ~~~~~i~Ep~Aaa~~~-----~~~~~~~-~~~~vlvvD~Gggt~dvsv~~ 215 (475)
..+++|+-.+=+.+++ .+..-.. ...++.++|+|||+|.++...
T Consensus 150 ~~v~iisG~eEg~y~wi~vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 150 QGAKIITGQEEGAYGWITINYLLGRFKTPGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHTTTTC---CCCCEEEEECSSEEEEEECC
T ss_pred CceEECCchhhhhhhHHHHHhhhccccCCCCCceEEEecCCCceEEEecc
Confidence 4577887555444433 3322111 135788999999999987654
No 161
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=55.41 E-value=36 Score=33.97 Aligned_cols=53 Identities=19% Similarity=0.290 Sum_probs=33.8
Q ss_pred CceEEEEEeCCCceEEEEEEEeCC-eEEEEE----EcCCCCCc-hhHHHHHHHHHHHHH
Q 041815 196 EKNVLIFDLGGGTFDVSLLTIEKG-IFKVKA----TAGDTHLG-GEDFDNRMVNHFIQE 248 (475)
Q Consensus 196 ~~~vlvvD~Gggt~dvsv~~~~~~-~~~v~~----~~~~~~~G-G~~id~~l~~~l~~~ 248 (475)
...++.+|+||.++-+.++++.+. .+++.. .......| |..+=..|++.+.+.
T Consensus 79 ~G~~LalDlGGTn~Rv~~V~l~g~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~i~~f 137 (485)
T 3o8m_A 79 TGDFLALDLGGTNLRVVLVKLGGNHDFDTTQNKYRLPDHLRTGTSEQLWSFIAKCLKEF 137 (485)
T ss_dssp EEEEEEEEESSSEEEEEEEEEESSSCEEEEEEEEECCTTGGGSBHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEecCCeEEEEEEEECCCCceEEEEEEEecCchhccCCHHHHHHHHHHHHHHH
Confidence 468999999999999999999764 344332 22333334 555545555555443
No 162
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=54.49 E-value=5.2 Score=28.61 Aligned_cols=31 Identities=35% Similarity=0.860 Sum_probs=25.8
Q ss_pred ccccccccCCCCCC-ceeecccCCCCCCcCCC
Q 041815 442 TLSKCNGCKRPAFG-LMYRCELCNFNLHIPCM 472 (475)
Q Consensus 442 ~~~~c~~c~~~~~~-~~~~~~~~~~~~~~~~~ 472 (475)
....|..|+.+..+ .+..|+.|+--.|..|.
T Consensus 17 ~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv 48 (75)
T 2k16_A 17 QIWICPGCNKPDDGSPMIGCDDCDDWYHWPCV 48 (75)
T ss_dssp EEECBTTTTBCCSSCCEEECSSSSSEEEHHHH
T ss_pred CCcCCCCCCCCCCCCCEEEcCCCCcccccccC
Confidence 33679999999887 68999999988898884
No 163
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=53.46 E-value=12 Score=31.50 Aligned_cols=18 Identities=39% Similarity=0.403 Sum_probs=16.4
Q ss_pred CEEEEecCCccEEEEEEE
Q 041815 8 PAIGIDLGTTYSCVGVWQ 25 (475)
Q Consensus 8 ~vvGIDlGTt~s~va~~~ 25 (475)
.++|||-|++.+..++.+
T Consensus 2 rILGIDPGl~~tG~gvi~ 19 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVA 19 (166)
T ss_dssp EEEEEECCSSEEEEEEEE
T ss_pred EEEEEccccCceEEEEEE
Confidence 689999999999999874
No 164
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=53.37 E-value=3.5 Score=28.85 Aligned_cols=27 Identities=26% Similarity=0.709 Sum_probs=23.1
Q ss_pred ccccccCCCCCCceeecccCCCCCCcCCC
Q 041815 444 SKCNGCKRPAFGLMYRCELCNFNLHIPCM 472 (475)
Q Consensus 444 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~~ 472 (475)
-+|..|+..| ....|+.|+--.|..|.
T Consensus 13 ~~C~vC~~~~--~ll~Cd~C~~~~H~~Cl 39 (66)
T 2lri_C 13 ARCGVCGDGT--DVLRCTHCAAAFHWRCH 39 (66)
T ss_dssp CCCTTTSCCT--TCEECSSSCCEECHHHH
T ss_pred CCcCCCCCCC--eEEECCCCCCceecccC
Confidence 4799999765 58899999999999984
No 165
>2k0a_A PRE-mRNA-splicing factor RDS3; zinc finger, topological knot, mRNA processing, nucleus, spliceosome, RNA binding protein; NMR {Saccharomyces cerevisiae}
Probab=51.72 E-value=3.4 Score=31.25 Aligned_cols=22 Identities=18% Similarity=0.431 Sum_probs=19.8
Q ss_pred cccccccC-CCCCCceeecccCC
Q 041815 443 LSKCNGCK-RPAFGLMYRCELCN 464 (475)
Q Consensus 443 ~~~c~~c~-~~~~~~~~~~~~~~ 464 (475)
-.+|-.|+ -+|....|+|.+|-
T Consensus 57 ~~rCIiCg~~~g~~dAYYC~eC~ 79 (109)
T 2k0a_A 57 AKNCIICNLNVGVNDAFYCWECC 79 (109)
T ss_dssp TSBCTTTSSSBCCEECEECHHHH
T ss_pred CCceEEcCCCCCcccceehHhhh
Confidence 37999999 99999999999883
No 166
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=50.27 E-value=12 Score=27.74 Aligned_cols=27 Identities=30% Similarity=0.942 Sum_probs=23.8
Q ss_pred ccccccCCCCCCceeecccCCCCCCcCCC
Q 041815 444 SKCNGCKRPAFGLMYRCELCNFNLHIPCM 472 (475)
Q Consensus 444 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~~ 472 (475)
-.|..|+..| ....|+.|+--.|..|-
T Consensus 26 ~~C~vC~~~g--~LL~CD~C~~~fH~~Cl 52 (88)
T 1fp0_A 26 TICRVCQKPG--DLVMCNQCEFCFHLDCH 52 (88)
T ss_dssp SCCSSSCSSS--CCEECTTSSCEECTTSS
T ss_pred CcCcCcCCCC--CEEECCCCCCceecccC
Confidence 5799999875 68899999999999996
No 167
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=50.03 E-value=9.6 Score=26.71 Aligned_cols=32 Identities=31% Similarity=0.761 Sum_probs=25.6
Q ss_pred CcccccccccCCCCCC-ceeecccCCCCCCcCCC
Q 041815 440 HKTLSKCNGCKRPAFG-LMYRCELCNFNLHIPCM 472 (475)
Q Consensus 440 ~~~~~~c~~c~~~~~~-~~~~~~~~~~~~~~~~~ 472 (475)
+...-.| .|+.+..+ .+..|+.|+-=.|..|.
T Consensus 16 ~~~~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cv 48 (68)
T 3o70_A 16 FQGLVTC-FCMKPFAGRPMIECNECHTWIHLSCA 48 (68)
T ss_dssp TTTCCCS-TTCCCCTTCCEEECTTTCCEEETTTT
T ss_pred CCCceEe-ECCCcCCCCCEEECCCCCcccccccc
Confidence 3344567 89999776 58999999999999996
No 168
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=49.24 E-value=29 Score=32.15 Aligned_cols=49 Identities=16% Similarity=0.214 Sum_probs=31.3
Q ss_pred CCCeEEEecCCCCcH----HHHHHHHHHcCC------------cccccCCCCcchhhchHHHHHH
Q 041815 334 SVDDVVIVGGSARIP----KVQQLLQEFFNG------------KRLCKNINPDEAVAYGAAVQAA 382 (475)
Q Consensus 334 ~i~~VvLvGG~s~~p----~v~~~l~~~~~~------------~~v~~~~~p~~ava~Gaa~~a~ 382 (475)
+++.|+|-||.+..+ .+++.+++.... .++....-.+.|.++||+.++-
T Consensus 224 dPe~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa~l~~ 288 (302)
T 3epq_A 224 APXXIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAH 288 (302)
T ss_dssp CCSCEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHHHHHH
T ss_pred CchhhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHHHHHHHHH
Confidence 467899999988754 455555554311 1233344456789999998764
No 169
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=48.96 E-value=7.1 Score=39.47 Aligned_cols=33 Identities=15% Similarity=0.044 Sum_probs=26.4
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHcCCceeeee
Q 041815 145 NAVVTVPAYFTDSQRQATKDAGAMAGLNVLKII 177 (475)
Q Consensus 145 ~~vitVP~~~~~~~r~~l~~a~~~agl~~~~~i 177 (475)
.++.-+|..++.+.-.++.+++...|++....|
T Consensus 132 ~~I~v~~~~i~~~d~a~~in~a~~~g~~i~~~i 164 (607)
T 1nbw_A 132 GWIVLIDDAVDFLDAVWWLNEALDRGINVVAAI 164 (607)
T ss_dssp CEEEEECSSSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEECCCccCHHHHHHHHHHHHHcCCcEEEEE
Confidence 355558999999999999999999998665443
No 170
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=48.38 E-value=4.8 Score=26.28 Aligned_cols=28 Identities=25% Similarity=0.796 Sum_probs=23.4
Q ss_pred cccccCCCCC-CceeecccCCCCCCcCCC
Q 041815 445 KCNGCKRPAF-GLMYRCELCNFNLHIPCM 472 (475)
Q Consensus 445 ~c~~c~~~~~-~~~~~~~~~~~~~~~~~~ 472 (475)
.|..|+.+|. +.+-.|+.|+--.|..|-
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl 30 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCL 30 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHH
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccC
Confidence 4888998875 678899999998998885
No 171
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=48.21 E-value=9.7 Score=27.99 Aligned_cols=42 Identities=24% Similarity=0.461 Sum_probs=32.3
Q ss_pred ccccceeccCcccccccccCCC-CC---CceeecccCCCCCCcCCC
Q 041815 431 QAHDLQLKNHKTLSKCNGCKRP-AF---GLMYRCELCNFNLHIPCM 472 (475)
Q Consensus 431 ~~h~l~~~~~~~~~~c~~c~~~-~~---~~~~~~~~~~~~~~~~~~ 472 (475)
..|-+.--|-+...+|+.|+++ +. ...|+|.=|..-+|..|.
T Consensus 26 ~~H~WveGNl~~~s~C~vC~k~c~s~~~L~g~rC~WCq~~VH~~C~ 71 (84)
T 1r79_A 26 MPHQWLEGNLPVSAKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCK 71 (84)
T ss_dssp BCCCEEESCCCTTCBCSSSCCBCCCTTTCCCEEESSSCCEECHHHH
T ss_pred ceeeEEccCCCCCCEeCCCCCEeCCccCCCCCCCcccChhHHHHHH
Confidence 3566666666666899999987 22 367899999999999885
No 172
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=48.11 E-value=3.8 Score=43.10 Aligned_cols=41 Identities=27% Similarity=0.706 Sum_probs=0.0
Q ss_pred cccceeccCcccccccccCCC--CCC-ceeecccCCCCCCcCCC
Q 041815 432 AHDLQLKNHKTLSKCNGCKRP--AFG-LMYRCELCNFNLHIPCM 472 (475)
Q Consensus 432 ~h~l~~~~~~~~~~c~~c~~~--~~~-~~~~~~~~~~~~~~~~~ 472 (475)
.|.+..+.-+.+--|+.|+.. |-+ -.|.|..|+|..|..|.
T Consensus 37 ~H~f~~~~~~~p~~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~ 80 (674)
T 3pfq_A 37 NHKFTARFFKQPTFCSHCTDFIWGFGKQGFQCQVCSFVVHKRCH 80 (674)
T ss_dssp --------------------------------------------
T ss_pred CceEEeeeCCCCCccccccccccccCCceeECCCCCCCcChhhc
Confidence 355555554445569999976 332 57999999999999996
No 173
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=47.51 E-value=7 Score=30.11 Aligned_cols=30 Identities=23% Similarity=0.513 Sum_probs=26.0
Q ss_pred cccccccCCC--CCCceeecc-cCCCCCCcCCC
Q 041815 443 LSKCNGCKRP--AFGLMYRCE-LCNFNLHIPCM 472 (475)
Q Consensus 443 ~~~c~~c~~~--~~~~~~~~~-~~~~~~~~~~~ 472 (475)
.+.|-.|+.| -.+.+..|+ .|+-=.|..|.
T Consensus 3 ~~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CV 35 (105)
T 2xb1_A 3 VYPCGACRSEVNDDQDAILCEASCQKWFHRECT 35 (105)
T ss_dssp CCBCTTTCSBCCTTSCEEECTTTTCCEEEGGGT
T ss_pred cCCCCCCCCccCCCCCEEEecCCcccccccccC
Confidence 3789999999 567899998 99998999885
No 174
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=46.54 E-value=9.1 Score=28.37 Aligned_cols=29 Identities=21% Similarity=0.564 Sum_probs=25.4
Q ss_pred ccccccCCCCC---CceeecccCCCCCCcCCC
Q 041815 444 SKCNGCKRPAF---GLMYRCELCNFNLHIPCM 472 (475)
Q Consensus 444 ~~c~~c~~~~~---~~~~~~~~~~~~~~~~~~ 472 (475)
-.|..|+.... +.+-.|+.|+--.|..|-
T Consensus 17 ~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl 48 (88)
T 1wev_A 17 LACVVCRQMTVASGNQLVECQECHNLYHQDCH 48 (88)
T ss_dssp CSCSSSCCCCCCTTCCEEECSSSCCEEETTTS
T ss_pred CcCCCCCCCCCCCCCceEECCCCCCeEcCccC
Confidence 47999998854 789999999999999994
No 175
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=45.76 E-value=12 Score=25.68 Aligned_cols=27 Identities=19% Similarity=0.502 Sum_probs=21.5
Q ss_pred cccccccccCCCC---CCceeecccCCCCC
Q 041815 441 KTLSKCNGCKRPA---FGLMYRCELCNFNL 467 (475)
Q Consensus 441 ~~~~~c~~c~~~~---~~~~~~~~~~~~~~ 467 (475)
...|+|--|+..= .+...+|.+|.+.|
T Consensus 19 ~v~Y~C~~Cg~~~~l~~~~~iRC~~CG~RI 48 (63)
T 3h0g_L 19 TMIYLCADCGARNTIQAKEVIRCRECGHRV 48 (63)
T ss_dssp CCCCBCSSSCCBCCCCSSSCCCCSSSCCCC
T ss_pred CeEEECCCCCCeeecCCCCceECCCCCcEE
Confidence 4569999998763 36779999999876
No 176
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=45.66 E-value=12 Score=25.86 Aligned_cols=27 Identities=26% Similarity=0.838 Sum_probs=23.6
Q ss_pred ccccccCCCCCCceeecccCCCCCCcCCC
Q 041815 444 SKCNGCKRPAFGLMYRCELCNFNLHIPCM 472 (475)
Q Consensus 444 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~~ 472 (475)
-.|..|+.. |.+..|+.|+--.|..|-
T Consensus 9 ~~C~vC~~~--g~ll~CD~C~~~fH~~Cl 35 (66)
T 1xwh_A 9 DECAVCRDG--GELICCDGCPRAFHLACL 35 (66)
T ss_dssp CSBSSSSCC--SSCEECSSCCCEECTTTS
T ss_pred CCCccCCCC--CCEEEcCCCChhhccccc
Confidence 579999976 479999999999999996
No 177
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=45.47 E-value=1.4e+02 Score=28.06 Aligned_cols=69 Identities=16% Similarity=0.238 Sum_probs=45.1
Q ss_pred CceEEEEEeCCCceEEEEEEEe-CCeEEEEEEc-CCCCCchhHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHH
Q 041815 196 EKNVLIFDLGGGTFDVSLLTIE-KGIFKVKATA-GDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAVQRLRKDCER 273 (475)
Q Consensus 196 ~~~vlvvD~Gggt~dvsv~~~~-~~~~~v~~~~-~~~~~GG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~ 273 (475)
...+.++|+|..++-+.|+++. ++.++++... ....+|- .++.. -..++..+++.....+.
T Consensus 15 ~~~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vrLg~-g~~~~----------------g~ls~eai~r~~~aL~~ 77 (343)
T 3cer_A 15 SVTVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQ-DVDKT----------------HRFADEALERAYVAARE 77 (343)
T ss_dssp CEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCCTTT-THHHH----------------SSCCHHHHHHHHHHHHH
T ss_pred CCeEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEeeCCC-Ccccc----------------CCcCHHHHHHHHHHHHH
Confidence 5679999999999999999998 4556655432 3345553 23211 12356777777777777
Q ss_pred HHHHhcCC
Q 041815 274 AKRILSST 281 (475)
Q Consensus 274 ~K~~ls~~ 281 (475)
.+..+..-
T Consensus 78 f~~~~~~~ 85 (343)
T 3cer_A 78 FAGVIAEH 85 (343)
T ss_dssp HHHHHTTS
T ss_pred HHHHHHHC
Confidence 77666543
No 178
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=45.37 E-value=89 Score=30.81 Aligned_cols=54 Identities=13% Similarity=0.111 Sum_probs=35.0
Q ss_pred CceEEEEEeCCCceEEEEEEEeCCe---EEEEEEcCCCCC---chhHHHHHHHHHHHHHH
Q 041815 196 EKNVLIFDLGGGTFDVSLLTIEKGI---FKVKATAGDTHL---GGEDFDNRMVNHFIQEF 249 (475)
Q Consensus 196 ~~~vlvvD~Gggt~dvsv~~~~~~~---~~v~~~~~~~~~---GG~~id~~l~~~l~~~~ 249 (475)
...++.+|+||.++-+.++...+.. .+.......... ++..+-..|++.+.+..
T Consensus 60 ~G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~ 119 (457)
T 2yhx_A 60 AGSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAAAMSTTAIPSDLWGNXAXSNAAFS 119 (457)
T ss_dssp CEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCTTTTSCSCTHHHHHHHHHHHHHHH
T ss_pred cceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEEcCCccCCCCHHHHHHHHHHHHHHHH
Confidence 5678999999999999999987665 222222221222 56666666666665533
No 179
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=45.16 E-value=28 Score=33.23 Aligned_cols=21 Identities=24% Similarity=0.213 Sum_probs=18.3
Q ss_pred CCCEEEEecCCccEEEEEEEC
Q 041815 6 AAPAIGIDLGTTYSCVGVWQH 26 (475)
Q Consensus 6 ~~~vvGIDlGTt~s~va~~~~ 26 (475)
++.++|||+|.|++++++.+.
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~ 48 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVRE 48 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEE
T ss_pred CCeEEEEEEccccEEEEEEec
Confidence 467999999999999998853
No 180
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=44.22 E-value=13 Score=25.33 Aligned_cols=27 Identities=33% Similarity=0.832 Sum_probs=23.1
Q ss_pred ccccccCCCCCCceeecccCCCCCCcCCC
Q 041815 444 SKCNGCKRPAFGLMYRCELCNFNLHIPCM 472 (475)
Q Consensus 444 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~~ 472 (475)
..|..|+.. |.+..|+.|+--.|..|-
T Consensus 10 ~~C~vC~~~--g~ll~Cd~C~~~fH~~Cl 36 (61)
T 1mm2_A 10 EFCRVCKDG--GELLCCDTCPSSYHIHCL 36 (61)
T ss_dssp SSCTTTCCC--SSCBCCSSSCCCBCSSSS
T ss_pred CcCCCCCCC--CCEEEcCCCCHHHccccc
Confidence 469999875 478999999999999995
No 181
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=43.29 E-value=11 Score=34.89 Aligned_cols=59 Identities=19% Similarity=0.082 Sum_probs=33.8
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHHH-HcCC-ceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCc
Q 041815 143 VSNAVVTVPAYFTDSQRQATKDAGA-MAGL-NVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGT 208 (475)
Q Consensus 143 ~~~~vitVP~~~~~~~r~~l~~a~~-~agl-~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt 208 (475)
+..+.|++|..- ......+++..+ ..++ ..+.+.++..||+++-. . ....+++=+|-|.
T Consensus 58 i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~----g--~~~~v~v~~GTGi 118 (291)
T 1zxo_A 58 FNAVYFYGAGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLC----G--QKAGIACILGTGS 118 (291)
T ss_dssp ---CEEECTTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTT----T--TSCBEEEEESSSE
T ss_pred ccEEEEEcCCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhc----C--CCCcEEEEeCCCh
Confidence 345788888754 222224444443 3454 46899999999998653 1 2334445577776
No 182
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=42.58 E-value=20 Score=32.71 Aligned_cols=20 Identities=25% Similarity=0.559 Sum_probs=17.9
Q ss_pred EEEEecCCccEEEEEEECCc
Q 041815 9 AIGIDLGTTYSCVGVWQHDR 28 (475)
Q Consensus 9 vvGIDlGTt~s~va~~~~g~ 28 (475)
++.||+|+|+++.++++++.
T Consensus 2 lL~IDIGNT~ik~gl~~~~~ 21 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEEGE 21 (268)
T ss_dssp EEEEEECSSEEEEEEEETTE
T ss_pred EEEEEECcCcEEEEEEECCE
Confidence 58999999999999998764
No 183
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=42.55 E-value=11 Score=28.53 Aligned_cols=28 Identities=36% Similarity=0.782 Sum_probs=23.8
Q ss_pred ccccccCCCCC-CceeecccCCCCCCcCCC
Q 041815 444 SKCNGCKRPAF-GLMYRCELCNFNLHIPCM 472 (475)
Q Consensus 444 ~~c~~c~~~~~-~~~~~~~~~~~~~~~~~~ 472 (475)
-+| .|+.+.. +.+..|+.|+--.|..|.
T Consensus 29 vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~ 57 (98)
T 2lv9_A 29 TRC-ICGFTHDDGYMICCDKCSVWQHIDCM 57 (98)
T ss_dssp CCC-TTSCCSCSSCEEEBTTTCBEEETTTT
T ss_pred EEe-ECCCccCCCcEEEcCCCCCcCcCcCC
Confidence 467 6888864 889999999999999996
No 184
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=42.47 E-value=19 Score=34.64 Aligned_cols=21 Identities=14% Similarity=0.362 Sum_probs=18.8
Q ss_pred CCEEEEecCCccEEEEEEECC
Q 041815 7 APAIGIDLGTTYSCVGVWQHD 27 (475)
Q Consensus 7 ~~vvGIDlGTt~s~va~~~~g 27 (475)
+.++|||+|.|++++++.+.+
T Consensus 2 ~~vlgidiGgt~ik~al~d~~ 22 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFEDE 22 (381)
T ss_dssp CEEEEEEECSSEEEEEEEETT
T ss_pred CeEEEEECCccceeEEEEecc
Confidence 478999999999999999865
No 185
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=41.19 E-value=30 Score=32.03 Aligned_cols=48 Identities=21% Similarity=0.115 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHc
Q 041815 308 ELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFF 358 (475)
Q Consensus 308 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~ 358 (475)
++++...+.+.+.++++|+++++++++|+.|+.-|+++++ -+.+.+.|
T Consensus 211 ~~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~l 258 (317)
T 1hnj_A 211 EVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKL 258 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHc
Confidence 3445556677889999999999999999999999987654 55788888
No 186
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.97 E-value=13 Score=24.75 Aligned_cols=27 Identities=26% Similarity=0.888 Sum_probs=23.5
Q ss_pred ccccccCCCCCCceeecccCCCCCCcCCC
Q 041815 444 SKCNGCKRPAFGLMYRCELCNFNLHIPCM 472 (475)
Q Consensus 444 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~~ 472 (475)
..|..|+.. +.+..|+.|+--.|..|-
T Consensus 10 ~~C~vC~~~--g~ll~Cd~C~~~~H~~Cl 36 (56)
T 2yql_A 10 DFCSVCRKS--GQLLMCDTCSRVYHLDCL 36 (56)
T ss_dssp CSCSSSCCS--SCCEECSSSSCEECSSSS
T ss_pred CCCccCCCC--CeEEEcCCCCcceECccC
Confidence 479999986 478999999999999996
No 187
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=40.15 E-value=19 Score=33.86 Aligned_cols=39 Identities=15% Similarity=0.222 Sum_probs=16.7
Q ss_pred CEEEEecCCccEEEEEEE-CCc--EEEE--ecCCCCcccceEEE
Q 041815 8 PAIGIDLGTTYSCVGVWQ-HDR--VEII--ANDQGNRTTPSYVA 46 (475)
Q Consensus 8 ~vvGIDlGTt~s~va~~~-~g~--~~vi--~~~~g~~~~Ps~v~ 46 (475)
.++|+|+|..|++++..+ +|. +..+ +-|.|...++..+.
T Consensus 1 ~iiG~DIGGAn~K~a~~~~~g~~~~~~~~~PlW~~~~~L~~~l~ 44 (334)
T 3cet_A 1 MILGIDIGGANTKITELHENGEFKVHHLYFPMWKNNDKLAEVLK 44 (334)
T ss_dssp CEEEEEEC--CEEEEEECSTTCCEEEEC----------------
T ss_pred CeeEEEecccceeeeeecCCCceEEEEEecCCcCCchHHHHHHH
Confidence 379999999999999875 444 3322 45777666665544
No 188
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=40.09 E-value=5 Score=37.16 Aligned_cols=43 Identities=14% Similarity=0.056 Sum_probs=28.6
Q ss_pred CCCeEEEecCCCCcHHHHHHHHHHcCC--cccccCCCCcchhhchHHHHH
Q 041815 334 SVDDVVIVGGSARIPKVQQLLQEFFNG--KRLCKNINPDEAVAYGAAVQA 381 (475)
Q Consensus 334 ~i~~VvLvGG~s~~p~v~~~l~~~~~~--~~v~~~~~p~~ava~Gaa~~a 381 (475)
+++.|+|.||.+.. +.+.|++.+.. .++. .+..+.+.||++++
T Consensus 232 ~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~---~~~~a~~~GAa~la 276 (291)
T 1zxo_A 232 KQYPVHFIGSIAYC--YKEILQDAARQTGIQIG---KILQSPMEGLIQYH 276 (291)
T ss_dssp TTSCEEECSHHHHH--THHHHHHHTTTTTCCEE---EECSCTHHHHHTTS
T ss_pred CCceEEEECcHHHH--HHHHHHHHHhcCCcEEe---ecCCCHHHHHHHHH
Confidence 56789999998765 66666666632 2222 24567788888775
No 189
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=40.06 E-value=19 Score=33.37 Aligned_cols=44 Identities=23% Similarity=0.345 Sum_probs=31.6
Q ss_pred CeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHHHH
Q 041815 336 DDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAA 382 (475)
Q Consensus 336 ~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~ 382 (475)
..|.|+|........+..|+. + |.++.. .++++++..|....+.
T Consensus 248 ~~v~LiG~~~L~~~Y~~AL~~-~-G~~~~~-~d~~~~~~~GL~~~~~ 291 (295)
T 3nuw_A 248 QAISLVAGSSLTSRYQQAFAA-I-GREVSA-VAGDTAFQTGIRSIAY 291 (295)
T ss_dssp SCEEEEECHHHHHHHHHHHHH-T-TCCEEE-EEHHHHHHHHHHHHHH
T ss_pred CeEEEEeCHHHHHHHHHHHHH-c-CCCcee-cCHHHHHHHHHHHHHH
Confidence 579999999888888888865 4 554433 3788888888665443
No 190
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=38.76 E-value=1.5e+02 Score=27.40 Aligned_cols=38 Identities=21% Similarity=0.298 Sum_probs=28.1
Q ss_pred CceEEEEEeCCCceEEEEEEEeCCeEEEEEEc-CCCCCc
Q 041815 196 EKNVLIFDLGGGTFDVSLLTIEKGIFKVKATA-GDTHLG 233 (475)
Q Consensus 196 ~~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~~-~~~~~G 233 (475)
...+.++|+|..++-+.|++..++.+..+... ....+|
T Consensus 11 ~m~~a~IDiGSns~rl~I~~~~~~~~~~i~~~k~~vrLg 49 (315)
T 1t6c_A 11 IMRVASIDIGSYSVRLTIAQIKDGKLSIILERGRITSLG 49 (315)
T ss_dssp CEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCTT
T ss_pred CcEEEEEEECcCcEEEEEEEEcCCcEEEEeeeeEEeecC
Confidence 35799999999999999999987766554432 223455
No 191
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=38.43 E-value=80 Score=31.26 Aligned_cols=24 Identities=38% Similarity=0.688 Sum_probs=21.2
Q ss_pred CceEEEEEeCCCceEEEEEEEeCC
Q 041815 196 EKNVLIFDLGGGTFDVSLLTIEKG 219 (475)
Q Consensus 196 ~~~vlvvD~Gggt~dvsv~~~~~~ 219 (475)
...++.+|+||.++-|..+++.++
T Consensus 76 ~G~fLAlDlGGTNfRV~~V~L~g~ 99 (470)
T 3f9m_A 76 VGDFLSLDLGGTNFRVMLVKVGEG 99 (470)
T ss_dssp CEEEEEEEESSSEEEEEEEEEEC-
T ss_pred ceEEEEEEecCceEEEEEEEECCC
Confidence 568999999999999999999764
No 192
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=37.50 E-value=41 Score=32.57 Aligned_cols=46 Identities=13% Similarity=0.044 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCC-CcHHHHHHHHHHc
Q 041815 309 LNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSA-RIPKVQQLLQEFF 358 (475)
Q Consensus 309 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s-~~p~v~~~l~~~~ 358 (475)
+++-...++...|-...... ..+|.|+++||-+ +.+.+++.+.+.+
T Consensus 301 A~d~f~yri~k~IGa~~a~L----ggvDaiVFTgGIGEns~~vR~~i~~~l 347 (408)
T 1g99_A 301 ALEIFAYKVKKFIGEYSAVL----NGADAVVFTAGIGENSASIRKRILTGL 347 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHT----TSCSEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHhh----CCCCEEEECccccccCHHHHHHHHhhh
Confidence 44445555555555555443 3489999999999 9999999999866
No 193
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=37.01 E-value=1e+02 Score=30.18 Aligned_cols=30 Identities=30% Similarity=0.636 Sum_probs=24.4
Q ss_pred CceEEEEEeCCCceEEEEEEEeCCeEEEEEE
Q 041815 196 EKNVLIFDLGGGTFDVSLLTIEKGIFKVKAT 226 (475)
Q Consensus 196 ~~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~ 226 (475)
...++.+|+||.++-+.++++.++ +++...
T Consensus 58 ~G~~LAlDlGGTn~RV~~V~l~g~-~~~~~~ 87 (445)
T 3hm8_A 58 RGDFLALDLGGTNFRVLLVRVTTG-VQITSE 87 (445)
T ss_dssp CEEEEEEEESSSSEEEEEEEESSS-EEEEEE
T ss_pred eeEEEEEEecCCeEEEEEEEECCc-eEEEEE
Confidence 567999999999999999999766 554443
No 194
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=36.87 E-value=15 Score=24.52 Aligned_cols=27 Identities=22% Similarity=0.621 Sum_probs=19.1
Q ss_pred ccccccccCCC-----------CCCceeecccCCCCCC
Q 041815 442 TLSKCNGCKRP-----------AFGLMYRCELCNFNLH 468 (475)
Q Consensus 442 ~~~~c~~c~~~-----------~~~~~~~~~~~~~~~~ 468 (475)
.+|.|+.|+.. -....|.|..|+..+-
T Consensus 13 k~~~C~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~f~ 50 (62)
T 1vd4_A 13 ASFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVE 50 (62)
T ss_dssp SEEECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBCE
T ss_pred CCccCCCCCchhccHHHhHhhcCCCCCEECCCCCCccc
Confidence 46999999862 1235699999986553
No 195
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=36.28 E-value=18 Score=26.92 Aligned_cols=28 Identities=29% Similarity=0.884 Sum_probs=22.6
Q ss_pred ccccccCCCCCCceeeccc--CCC-CCCcCCC
Q 041815 444 SKCNGCKRPAFGLMYRCEL--CNF-NLHIPCM 472 (475)
Q Consensus 444 ~~c~~c~~~~~~~~~~~~~--~~~-~~~~~~~ 472 (475)
-.| .|+.+-.|.+..|+. |.. =+|..|.
T Consensus 37 ~yC-iC~~~~~g~MI~CD~~dC~~~WfH~~CV 67 (91)
T 1weu_A 37 TYC-LCHQVSYGEMIGCDNPDCSIEWFHFACV 67 (91)
T ss_dssp BCS-TTCCBCCSCCCCCSCSSCSCCCCCSTTT
T ss_pred cEE-ECCCCCCCCEeEecCCCCCCCCEecccC
Confidence 457 999988899999998 554 4899885
No 196
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=36.10 E-value=19 Score=24.65 Aligned_cols=29 Identities=24% Similarity=0.698 Sum_probs=24.4
Q ss_pred ccccccCCCC--CCceeecccCCCCCCcCCC
Q 041815 444 SKCNGCKRPA--FGLMYRCELCNFNLHIPCM 472 (475)
Q Consensus 444 ~~c~~c~~~~--~~~~~~~~~~~~~~~~~~~ 472 (475)
-.|..|+.+- .+.+..|+.|+-=.|..|.
T Consensus 7 ~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cv 37 (64)
T 1we9_A 7 GQCGACGESYAADEFWICCDLCEMWFHGKCV 37 (64)
T ss_dssp CCCSSSCCCCCSSSCEEECSSSCCEEETTTT
T ss_pred CCCCCCCCccCCCCCEEEccCCCCCCCcccc
Confidence 4688899885 4788999999988899996
No 197
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=36.07 E-value=18 Score=24.89 Aligned_cols=30 Identities=23% Similarity=0.480 Sum_probs=25.2
Q ss_pred ccccccCCCC---CCceeecccCCCCCCcCCCC
Q 041815 444 SKCNGCKRPA---FGLMYRCELCNFNLHIPCMF 473 (475)
Q Consensus 444 ~~c~~c~~~~---~~~~~~~~~~~~~~~~~~~~ 473 (475)
-.|..|+..- .+.+..|+.|+--.|..|--
T Consensus 7 ~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~ 39 (66)
T 2yt5_A 7 GVCTICQEEYSEAPNEMVICDKCGQGYHQLCHT 39 (66)
T ss_dssp CCBSSSCCCCCBTTBCEEECSSSCCEEETTTSS
T ss_pred CCCCCCCCCCCCCCCCEEECCCCChHHHhhhCC
Confidence 5799999863 38999999999999999953
No 198
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=34.96 E-value=91 Score=32.15 Aligned_cols=100 Identities=13% Similarity=0.108 Sum_probs=62.1
Q ss_pred CceEEEEEeCCCceEEEEEEEeCCeEEEEEE--cCCCCCchhHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHH
Q 041815 196 EKNVLIFDLGGGTFDVSLLTIEKGIFKVKAT--AGDTHLGGEDFDNRMVNHFIQEFKRKTEKDISGSPRAVQRLRKDCER 273 (475)
Q Consensus 196 ~~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~--~~~~~~GG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~ 273 (475)
...-+-+|+|..|.-..++.+..|..--... +.....|.+-+++.-+ +.++
T Consensus 205 ~~~GlAvDiGTTtv~~~LvdL~tG~~l~~~~~~NpQ~~~G~DVisRI~~---------------------------a~~~ 257 (631)
T 3zyy_X 205 RVFGLAIDIGTTTVVVQLVDLVSGKVLGTKGNYNKQAAFGDDVISRIIY---------------------------VDEN 257 (631)
T ss_dssp CCEEEEEEECSSEEEEEEEETTTCCEEEEEEEECGGGGTCSSHHHHHHH---------------------------HHHC
T ss_pred CceEEEEEecccceeEEEEECCCCCEEEeecccCCCCCcchHHHHHHHH---------------------------HhcC
Confidence 3456889999999888888887775422222 2333556555543311 0000
Q ss_pred HHHHhcCCceeEEEEeccccCccceEEEcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHH
Q 041815 274 AKRILSSTSQTTIEIDSLYEGIDFSSVMTRARFEELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQ 351 (475)
Q Consensus 274 ~K~~ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~ 351 (475)
.+-++++-+-+++.+.+++.+.+++++.+..+|..++++|-.+....+.
T Consensus 258 -----------------------------~~g~~~L~~~v~~~in~li~~l~~~~~i~~~~I~~~~v~GNt~M~hLll 306 (631)
T 3zyy_X 258 -----------------------------PDGAEKLRKAVLSTINELIFQLCKEHGVEKKEIMAAVVAGNTTMTHLFL 306 (631)
T ss_dssp -----------------------------TTHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEECHHHHHHHH
T ss_pred -----------------------------cccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHeeEEEEEccHHHHHHHc
Confidence 0112233344456667777888888899999999999999776655543
No 199
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=34.77 E-value=29 Score=31.66 Aligned_cols=22 Identities=18% Similarity=0.202 Sum_probs=18.8
Q ss_pred CCEEEEecCCccEEEEEEE-CCc
Q 041815 7 APAIGIDLGTTYSCVGVWQ-HDR 28 (475)
Q Consensus 7 ~~vvGIDlGTt~s~va~~~-~g~ 28 (475)
...+.||.|+|+++.++++ +++
T Consensus 23 ~M~L~IDiGNT~ik~g~~~~~~~ 45 (271)
T 2f9w_A 23 SMILELDCGNSLIKWRVIEGAAR 45 (271)
T ss_dssp CEEEEEEECSSCEEEEEEETTTE
T ss_pred CcEEEEEeCCCeeEEEEEeCCCE
Confidence 4579999999999999998 553
No 200
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.53 E-value=15 Score=27.44 Aligned_cols=29 Identities=31% Similarity=0.647 Sum_probs=25.6
Q ss_pred ccccccCCCCC-CceeecccCCCCCCcCCC
Q 041815 444 SKCNGCKRPAF-GLMYRCELCNFNLHIPCM 472 (475)
Q Consensus 444 ~~c~~c~~~~~-~~~~~~~~~~~~~~~~~~ 472 (475)
..|..|+..+. ..+..|+.|+--.|..|-
T Consensus 17 ~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl 46 (92)
T 2e6r_A 17 YICQVCSRGDEDDKLLFCDGCDDNYHIFCL 46 (92)
T ss_dssp CCCSSSCCSGGGGGCEECTTTCCEECSSSS
T ss_pred CCCccCCCcCCCCCEEEcCCCCchhccccC
Confidence 46999999885 789999999999999996
No 201
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=34.47 E-value=1.1e+02 Score=28.29 Aligned_cols=30 Identities=17% Similarity=0.279 Sum_probs=25.5
Q ss_pred ceEEEEEeCCCceEEEEEEEeCCeEEEEEE
Q 041815 197 KNVLIFDLGGGTFDVSLLTIEKGIFKVKAT 226 (475)
Q Consensus 197 ~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~ 226 (475)
..+.++|+|..++-+.|++..++.++++..
T Consensus 4 ~~~A~IDiGSNsirL~I~~~~~~~~~~i~~ 33 (315)
T 3mdq_A 4 QRIGVIDMGTNTFHLLITDIVNDRPHTLVN 33 (315)
T ss_dssp CEEEEEEECSSEEEEEEEEEETTEEEEEEE
T ss_pred ceEEEEEecCCcEEEEEEEEcCCceEEeee
Confidence 568999999999999999998877766554
No 202
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=34.39 E-value=16 Score=24.73 Aligned_cols=27 Identities=26% Similarity=0.888 Sum_probs=23.2
Q ss_pred ccccccCCCCCCceeecccCCCCCCcCCC
Q 041815 444 SKCNGCKRPAFGLMYRCELCNFNLHIPCM 472 (475)
Q Consensus 444 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~~ 472 (475)
-.|..|+.. |.+-.|+.|+--.|..|-
T Consensus 6 ~~C~vC~~~--g~ll~Cd~C~~~fH~~Cl 32 (60)
T 2puy_A 6 DFCSVCRKS--GQLLMCDTCSRVYHLDCL 32 (60)
T ss_dssp SSCTTTCCC--SSCEECSSSSCEECGGGS
T ss_pred CCCcCCCCC--CcEEEcCCCCcCEECCcC
Confidence 479999986 478999999999999985
No 203
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=34.31 E-value=12 Score=25.41 Aligned_cols=27 Identities=26% Similarity=0.800 Sum_probs=22.7
Q ss_pred ccccccCCCCCCceeecccCCCCCCcCCC
Q 041815 444 SKCNGCKRPAFGLMYRCELCNFNLHIPCM 472 (475)
Q Consensus 444 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~~ 472 (475)
-.|..|+.. +.+..|+.|+--.|..|-
T Consensus 12 ~~C~vC~~~--g~ll~CD~C~~~fH~~Cl 38 (61)
T 2l5u_A 12 DYCEVCQQG--GEIILCDTCPRAYHMVCL 38 (61)
T ss_dssp SSCTTTSCC--SSEEECSSSSCEEEHHHH
T ss_pred CCCccCCCC--CcEEECCCCChhhhhhcc
Confidence 579999885 588999999999998884
No 204
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=34.16 E-value=11 Score=27.95 Aligned_cols=29 Identities=24% Similarity=0.746 Sum_probs=24.9
Q ss_pred ccccccCCCC---CCceeecccCCCCCCcCCC
Q 041815 444 SKCNGCKRPA---FGLMYRCELCNFNLHIPCM 472 (475)
Q Consensus 444 ~~c~~c~~~~---~~~~~~~~~~~~~~~~~~~ 472 (475)
-.|..|+..| .+.+..|+.|+--.|..|-
T Consensus 26 ~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl 57 (88)
T 2l43_A 26 AVCSICMDGESQNSNVILFCDMCNLAVHQECY 57 (88)
T ss_dssp CCCSSCCSSSSCSEEEEEECSSSCCCCCHHHH
T ss_pred CcCCcCCCCCCCCCCCEEECCCCCchhhcccC
Confidence 4799999887 3689999999999999884
No 205
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.98 E-value=21 Score=25.66 Aligned_cols=28 Identities=29% Similarity=0.719 Sum_probs=23.5
Q ss_pred cccccCCCCC-CceeecccCCCCCCcCCC
Q 041815 445 KCNGCKRPAF-GLMYRCELCNFNLHIPCM 472 (475)
Q Consensus 445 ~c~~c~~~~~-~~~~~~~~~~~~~~~~~~ 472 (475)
.|..|+..++ +.+-.|+.|+--.|..|.
T Consensus 28 ~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl 56 (77)
T 2e6s_A 28 SCRVCGGKHEPNMQLLCDECNVAYHIYCL 56 (77)
T ss_dssp SCSSSCCCCCSTTEEECSSSCCEEETTSS
T ss_pred CCcCcCCcCCCCCEEEcCCCCcccccccc
Confidence 5678888754 788999999999999995
No 206
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=32.48 E-value=41 Score=31.16 Aligned_cols=47 Identities=11% Similarity=-0.053 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHc
Q 041815 309 LNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFF 358 (475)
Q Consensus 309 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~ 358 (475)
+++.....+.+.++++|+++++++++|+.|+.-++++++ -+.+.+.|
T Consensus 214 ~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~l 260 (322)
T 1ub7_A 214 VFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERL 260 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHc
Confidence 344455677788999999999999999999999987653 45677777
No 207
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=32.45 E-value=23 Score=26.33 Aligned_cols=28 Identities=25% Similarity=0.573 Sum_probs=22.3
Q ss_pred ccccccCCCCCCceeecccCC---CCCCcCCC
Q 041815 444 SKCNGCKRPAFGLMYRCELCN---FNLHIPCM 472 (475)
Q Consensus 444 ~~c~~c~~~~~~~~~~~~~~~---~~~~~~~~ 472 (475)
--| .|+.+.+|.+..|+.|+ ==.|..|.
T Consensus 27 ~yC-iC~~~~~g~MI~CD~c~C~~eWfH~~CV 57 (90)
T 2jmi_A 27 VYC-FCRNVSYGPMVACDNPACPFEWFHYGCV 57 (90)
T ss_dssp CCS-TTTCCCSSSEECCCSSSCSCSCEETTTS
T ss_pred cEE-EeCCCCCCCEEEecCCCCccccCcCccC
Confidence 356 89998888999999866 45788885
No 208
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=32.29 E-value=32 Score=32.38 Aligned_cols=48 Identities=25% Similarity=0.302 Sum_probs=35.8
Q ss_pred CeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHHHHHHcC
Q 041815 336 DDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVLSG 386 (475)
Q Consensus 336 ~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~~ 386 (475)
..|.|+|........+.+|+. + |.++.. .+++.++..|....+..+.+
T Consensus 260 ~~V~LiG~~~L~~~Y~~AL~~-~-G~~~~~-~d~d~a~~~GL~~~a~~~~~ 307 (330)
T 3t69_A 260 DGVCLVGSGGLGTLYRTALES-Q-GLNVRA-VDADEAVRAGLSAAARAIWP 307 (330)
T ss_dssp CEEEEEECHHHHHHHHHHHHH-T-TCEEEE-EEHHHHHHHHHHHHHHHHSC
T ss_pred CeEEEEeCHHHHHHHHHHHHH-c-CCCcee-eCHHHHHHHHHHHHHHHHHH
Confidence 579999999888888888875 5 555433 36889999998776665554
No 209
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=30.63 E-value=1.6e+02 Score=28.99 Aligned_cols=23 Identities=39% Similarity=0.621 Sum_probs=20.8
Q ss_pred CceEEEEEeCCCceEEEEEEEeC
Q 041815 196 EKNVLIFDLGGGTFDVSLLTIEK 218 (475)
Q Consensus 196 ~~~vlvvD~Gggt~dvsv~~~~~ 218 (475)
...++.+|+||.++-+.+++..+
T Consensus 67 ~G~~lalDlGGTn~Rv~~V~l~G 89 (451)
T 1bdg_A 67 TGNFLALDLGGTNYRVLSVTLEG 89 (451)
T ss_dssp CEEEEEEEESSSSEEEEEEEECC
T ss_pred cceEEEEEeCCCeEEEEEEecCC
Confidence 56789999999999999999976
No 210
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=30.11 E-value=37 Score=24.91 Aligned_cols=28 Identities=14% Similarity=0.229 Sum_probs=25.1
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHcCCce
Q 041815 146 AVVTVPAYFTDSQRQATKDAGAMAGLNV 173 (475)
Q Consensus 146 ~vitVP~~~~~~~r~~l~~a~~~agl~~ 173 (475)
-.++.|+.++..+|..+-+.|+..||..
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 3688899999999999999999999854
No 211
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=29.28 E-value=25 Score=31.12 Aligned_cols=40 Identities=20% Similarity=0.375 Sum_probs=27.4
Q ss_pred HcCCceeeeeechHHHHHHhhhccCCCCCceEEEEEeCCCceEEEEEE
Q 041815 168 MAGLNVLKIISEPTAAAIAYGLDRKATSEKNVLIFDLGGGTFDVSLLT 215 (475)
Q Consensus 168 ~agl~~~~~i~Ep~Aaa~~~~~~~~~~~~~~vlvvD~Gggt~dvsv~~ 215 (475)
..|++ +.+.++..|+|++.... ..++++-+|.| .-.+++.
T Consensus 90 ~~~~p-v~v~NDanaaalge~~~------~~~~~l~~GtG-iG~gii~ 129 (226)
T 3lm2_A 90 AFGRP-VRIVNDALMQAIGSYNG------GRMLFLGLGTG-LGAAMIV 129 (226)
T ss_dssp HHTSC-EEEEEHHHHHHHHHCCS------SEEEEEEESSS-EEEEEEE
T ss_pred hcCCe-EEEEEHHHHHHHHHhhc------CcEEEEEeCCc-eEEEEEE
Confidence 34664 68999999999876533 46788888876 4444443
No 212
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=29.22 E-value=50 Score=30.32 Aligned_cols=45 Identities=18% Similarity=0.086 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHc
Q 041815 311 MDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFF 358 (475)
Q Consensus 311 ~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~ 358 (475)
+...+.+.+.++++|+++++++++|+.|++-|+++++ -+.+.+.|
T Consensus 206 ~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~l 250 (309)
T 2ebd_A 206 KVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKL 250 (309)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHh
Confidence 3445667788999999999999999999999988754 45677777
No 213
>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2
Probab=29.01 E-value=18 Score=25.99 Aligned_cols=29 Identities=24% Similarity=0.630 Sum_probs=18.9
Q ss_pred ccccccCCC-------------CCCceeecccCCCCC-------CcCCC
Q 041815 444 SKCNGCKRP-------------AFGLMYRCELCNFNL-------HIPCM 472 (475)
Q Consensus 444 ~~c~~c~~~-------------~~~~~~~~~~~~~~~-------~~~~~ 472 (475)
|.|+.|++- -..+.|.|..|.-++ |..|-
T Consensus 11 F~C~~Cgd~lKK~kv~~H~~~Cr~~~~~SCIDC~~~F~~~~y~~HtsCI 59 (79)
T 1wjv_A 11 FTCNACGESVKKIQVEKHVSNCRNCECLSCIDCGKDFWGDDYKSHVKCI 59 (79)
T ss_dssp EEESSSCCEEETTHHHHHHHHCTTCCEEEETTTTEEEEGGGTTTCCCCC
T ss_pred EEcCCCCCeeecccchhHHhhCCCCCcEEecccCCeeCCCCEeCEeeeC
Confidence 777777764 123678999886444 66664
No 214
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=28.67 E-value=22 Score=25.00 Aligned_cols=27 Identities=26% Similarity=0.704 Sum_probs=21.7
Q ss_pred ccccCCCCC-CceeecccCCCCCCcCCC
Q 041815 446 CNGCKRPAF-GLMYRCELCNFNLHIPCM 472 (475)
Q Consensus 446 c~~c~~~~~-~~~~~~~~~~~~~~~~~~ 472 (475)
|..|+..+. +.+..|+.|+--.|..|-
T Consensus 21 C~~C~~~~~~~~ll~CD~C~~~yH~~Cl 48 (70)
T 3asl_A 21 CHLCGGRQDPDKQLMCDECDMAFHIYCL 48 (70)
T ss_dssp BTTTCCCSCGGGEEECTTTCCEEEGGGS
T ss_pred CcCCCCcCCCCCEEEcCCCCCceecccC
Confidence 446677654 789999999999999985
No 215
>3lwd_A 6-phosphogluconolactonase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; 1.75A {Chromohalobacter salexigens}
Probab=28.35 E-value=93 Score=27.32 Aligned_cols=48 Identities=19% Similarity=0.192 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHH
Q 041815 304 ARFEELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQE 356 (475)
Q Consensus 304 ~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~ 356 (475)
++-+++.+...+.+.+.++++++..+ .-.+.|.||+|-.+..+..++.
T Consensus 8 ~~~~~l~~~~A~~i~~~i~~~i~~~~-----~~~l~LsgGstp~~~y~~L~~~ 55 (226)
T 3lwd_A 8 EGRQRLAERLADTVAQALEADLAKRE-----RALLVVSGGSTPKPFFTSLAAK 55 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSS-----CEEEEECCSSTTHHHHHHHHTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCC-----CEEEEEcCCCCHHHHHHHHHhc
Confidence 34456666667777777777776532 3478899999999888887764
No 216
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=28.11 E-value=23 Score=23.03 Aligned_cols=25 Identities=32% Similarity=0.776 Sum_probs=20.3
Q ss_pred ccCCCCCC-ceeecccCCCCCCcCCC
Q 041815 448 GCKRPAFG-LMYRCELCNFNLHIPCM 472 (475)
Q Consensus 448 ~c~~~~~~-~~~~~~~~~~~~~~~~~ 472 (475)
.|+.+..+ .+..|+.|+-=.|..|.
T Consensus 8 ~C~~~~~~~~MI~Cd~C~~W~H~~Cv 33 (52)
T 3o7a_A 8 FCMKPFAGRPMIECNECHTWIHLSCA 33 (52)
T ss_dssp TTCCBCTTCCEEECTTTCCEEETTTT
T ss_pred EeCCcCCCCCEEEcCCCCcccccccc
Confidence 47777664 88899999988899886
No 217
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=27.58 E-value=46 Score=31.20 Aligned_cols=47 Identities=11% Similarity=0.017 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHc
Q 041815 309 LNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFF 358 (475)
Q Consensus 309 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~ 358 (475)
+++.....+.+.++++|++++++.++|+.|+.-+++.++ -+.+.+.+
T Consensus 225 v~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~l 271 (339)
T 1mzj_A 225 VFRWAVADVVPAAREALEVAGLTVGDLVAFVPHQANLRI---IDVLVDRL 271 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHh
Confidence 334455677788999999999999999999999887653 45677777
No 218
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=27.41 E-value=35 Score=32.60 Aligned_cols=18 Identities=11% Similarity=0.051 Sum_probs=14.9
Q ss_pred cCCceeeeeechHHHHHH
Q 041815 169 AGLNVLKIISEPTAAAIA 186 (475)
Q Consensus 169 agl~~~~~i~Ep~Aaa~~ 186 (475)
.++..+.+.|+..|+|++
T Consensus 127 ~~~~pv~v~NDa~aaalg 144 (373)
T 2q2r_A 127 FPPGHSAILNDLEAGGFG 144 (373)
T ss_dssp SCTTSEEEEEHHHHHHHH
T ss_pred cCCCCEEEEccHhHHhcc
Confidence 355468999999999998
No 219
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=27.36 E-value=26 Score=30.89 Aligned_cols=28 Identities=25% Similarity=0.674 Sum_probs=22.8
Q ss_pred cccccCCCCC-CceeecccCCCCCCcCCC
Q 041815 445 KCNGCKRPAF-GLMYRCELCNFNLHIPCM 472 (475)
Q Consensus 445 ~c~~c~~~~~-~~~~~~~~~~~~~~~~~~ 472 (475)
.|..|+..++ +.+--|+.|+--.|..|-
T Consensus 176 ~C~vC~~~~~~~~lL~CD~C~~~yH~~CL 204 (226)
T 3ask_A 176 ACHLCGGRQDPDKQLMCDECDMAFHIYCL 204 (226)
T ss_dssp SCSSSCCCCC--CCEECSSSCCEECSCC-
T ss_pred CCcCCCCCCCCCCeEEcCCCCcceeCccC
Confidence 5888988765 788899999999999995
No 220
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=27.31 E-value=73 Score=26.74 Aligned_cols=41 Identities=20% Similarity=0.096 Sum_probs=28.7
Q ss_pred HHHHHHHHHHhCCCCCCCCCeEEEecCCCCcH--HHHHHHHHHcCCccccc
Q 041815 317 CIKHVDMCLRTGKTDNSSVDDVVIVGGSARIP--KVQQLLQEFFNGKRLCK 365 (475)
Q Consensus 317 i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p--~v~~~l~~~~~~~~v~~ 365 (475)
|.+.+++++++ .|-|+.+||.+--+ ..++.+++.| +.++..
T Consensus 52 I~~~l~~a~~~-------~DlVittGG~g~~~~D~T~ea~a~~~-~~~l~~ 94 (172)
T 3kbq_A 52 IGWAFRVALEV-------SDLVVSSGGLGPTFDDMTVEGFAKCI-GQDLRI 94 (172)
T ss_dssp HHHHHHHHHHH-------CSEEEEESCCSSSTTCCHHHHHHHHH-TCCCEE
T ss_pred HHHHHHHHHhc-------CCEEEEcCCCcCCcccchHHHHHHHc-CCCeee
Confidence 33444555554 47999999987665 6899999999 655544
No 221
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=26.97 E-value=77 Score=27.62 Aligned_cols=62 Identities=15% Similarity=0.098 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHH------HHcCCcccccCCCCcchhhchH
Q 041815 314 FRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQ------EFFNGKRLCKNINPDEAVAYGA 377 (475)
Q Consensus 314 ~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~------~~~~~~~v~~~~~p~~ava~Ga 377 (475)
.+.+...|+++|++++++..++|.|.++-|-+...++|=-+. ..+ ++++ ..++..++.|..+
T Consensus 36 s~~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTglRig~~~AkgLa~~~-~iPl-~gVstL~a~a~~~ 103 (213)
T 3r6m_A 36 TKKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFTGVRIGIGIAQGLAFGA-ELPM-IGVSTLAAMAQAS 103 (213)
T ss_dssp HHHHHHHHHHHHHTTTCCTTTCSEEEEEEESSCHHHHHHHHHHHHHHHHHT-TCCE-EEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHccEEEEecCCCchhhHHHHHHHHHHHHHHh-CCCE-EEEcCHHHHHHhh
Confidence 456667889999999999999999999988888888875443 233 4433 3445555555443
No 222
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=25.55 E-value=53 Score=30.22 Aligned_cols=46 Identities=11% Similarity=0.005 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHc
Q 041815 310 NMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFF 358 (475)
Q Consensus 310 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~ 358 (475)
.+.....+.+.++++|+++++++++|+.|++-++++++ -+.+.+.|
T Consensus 207 ~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~l 252 (313)
T 1zow_A 207 FKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRI---MESARERL 252 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHh
Confidence 44455677788999999999999999999999887653 45567777
No 223
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=25.53 E-value=22 Score=25.51 Aligned_cols=29 Identities=28% Similarity=0.700 Sum_probs=24.5
Q ss_pred cccccccCCC-CCCceeecc--cCCCCCCcCCC
Q 041815 443 LSKCNGCKRP-AFGLMYRCE--LCNFNLHIPCM 472 (475)
Q Consensus 443 ~~~c~~c~~~-~~~~~~~~~--~~~~~~~~~~~ 472 (475)
.-.| .|+.+ -.|.+..|+ .|..=.|..|.
T Consensus 16 ~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CV 47 (78)
T 1wew_A 16 KVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCV 47 (78)
T ss_dssp CCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHH
T ss_pred CEEe-ECCCcCCCCCEEEECCccCCccccCEEE
Confidence 3578 79998 668999999 99999998884
No 224
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=25.52 E-value=95 Score=28.97 Aligned_cols=43 Identities=12% Similarity=0.081 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHH
Q 041815 310 NMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQ 352 (475)
Q Consensus 310 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~ 352 (475)
-+...+.+...++++|++++++..+++.|..+-|-+..+.++-
T Consensus 44 ~~~h~~~l~~~i~~~L~~agi~~~did~Ia~~~GPG~~~~lrv 86 (330)
T 2ivn_A 44 AEHHARLMKPLLRKALSEAGVSLDDIDVIAFSQGPGLGPALRV 86 (330)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCTTTCCEEEEEEESSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEECCCCchHHHHH
Confidence 3445566778889999999999999999998777776666543
No 225
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=25.37 E-value=41 Score=21.33 Aligned_cols=9 Identities=56% Similarity=1.468 Sum_probs=4.4
Q ss_pred eeecccCCC
Q 041815 457 MYRCELCNF 465 (475)
Q Consensus 457 ~~~~~~~~~ 465 (475)
.|.|..|+.
T Consensus 29 ~~~C~~C~~ 37 (57)
T 1bbo_A 29 PYHCTYCNF 37 (57)
T ss_dssp CEECSSSSC
T ss_pred CccCCCCCc
Confidence 355555543
No 226
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=25.31 E-value=30 Score=24.81 Aligned_cols=29 Identities=24% Similarity=0.652 Sum_probs=24.3
Q ss_pred ccccccCCCCC-CceeecccCCCCCCcCCC
Q 041815 444 SKCNGCKRPAF-GLMYRCELCNFNLHIPCM 472 (475)
Q Consensus 444 ~~c~~c~~~~~-~~~~~~~~~~~~~~~~~~ 472 (475)
-.|..|+..+. +.+..|+.|+--.|..|-
T Consensus 27 C~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl 56 (77)
T 3shb_A 27 CACHLCGGRQDPDKQLMCDECDMAFHIYCL 56 (77)
T ss_dssp TSBTTTCCCSCGGGEEECTTTCCEEETTTS
T ss_pred CcCCccCCCCCCcceeEeCCCCCccCcccC
Confidence 36778888876 778899999999999995
No 227
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=24.73 E-value=91 Score=29.25 Aligned_cols=45 Identities=11% Similarity=0.065 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHH
Q 041815 310 NMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLL 354 (475)
Q Consensus 310 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l 354 (475)
.+...+.+...|+++|++++++..+||.|.++-|-.....++--+
T Consensus 49 ~~~H~~~l~~~i~~~L~~ag~~~~did~Iav~~gPG~~t~lrvg~ 93 (334)
T 3eno_A 49 AVHHSEVIDTVISRALEKAKISIHDIDLIGFSMGPGLAPSLRVTA 93 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCcchHHHHH
Confidence 344556777889999999999999999999998887777776443
No 228
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=24.62 E-value=86 Score=30.27 Aligned_cols=47 Identities=13% Similarity=0.142 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCC-CcHHHHHHHHHHcC
Q 041815 309 LNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSA-RIPKVQQLLQEFFN 359 (475)
Q Consensus 309 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s-~~p~v~~~l~~~~~ 359 (475)
+++-...++...|-......+ .+|.|+++||-+ +.+.+++.+.+.+.
T Consensus 301 A~d~f~yri~k~IGa~~a~Lg----gvDaIVFTgGIGEns~~vR~~i~~~l~ 348 (403)
T 2iir_A 301 VLEIYDYRIAKYIGAYAAAMN----GVDAIVFTAGVGENSPITREDVCSYLE 348 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT----CCSEEEEEHHHHTTCHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHHHHHHHhC----CCCEEEECcccccCCHHHHHHHHhhhh
Confidence 344445555555544444432 489999999999 99999999998773
No 229
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=24.61 E-value=24 Score=29.38 Aligned_cols=31 Identities=26% Similarity=0.306 Sum_probs=20.4
Q ss_pred eccCcccccccccCCC--CCCceeecccCCCCC
Q 041815 437 LKNHKTLSKCNGCKRP--AFGLMYRCELCNFNL 467 (475)
Q Consensus 437 ~~~~~~~~~c~~c~~~--~~~~~~~~~~~~~~~ 467 (475)
-+.....|+|.+|+.. .......|..|.-.+
T Consensus 126 ~~~~~~~y~C~~Cg~~~~~~~~~~~Cp~CG~~~ 158 (165)
T 2lcq_A 126 KKVIKWRYVCIGCGRKFSTLPPGGVCPDCGSKV 158 (165)
T ss_dssp SSCCCCCEEESSSCCEESSCCGGGBCTTTCCBE
T ss_pred cccccEEEECCCCCCcccCCCCCCcCCCCCCcc
Confidence 3345567999999964 234445788887543
No 230
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=24.55 E-value=47 Score=30.95 Aligned_cols=47 Identities=13% Similarity=0.058 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHc
Q 041815 309 LNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFF 358 (475)
Q Consensus 309 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~ 358 (475)
+++-..+.+.+.++++|++++++.++|+.|+.-+++.++ -+.+.+.+
T Consensus 218 v~~~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~~---~d~~~~~l 264 (331)
T 2x3e_A 218 VFGQAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRI---LAAVADQL 264 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHc
Confidence 334455677788999999999999999999998888653 45577777
No 231
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=24.47 E-value=96 Score=28.87 Aligned_cols=47 Identities=11% Similarity=-0.041 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHHc
Q 041815 309 LNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEFF 358 (475)
Q Consensus 309 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~~ 358 (475)
+++..++.+.+.++++|++++++.++|+.+++-.++.+ +-+.+.+.+
T Consensus 228 v~~~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~---i~~~~~~~l 274 (333)
T 4dfe_A 228 VFKLAVNVLEKVAVEALEKANLSAEQIDWLIPHQANIR---IMQSTCRKL 274 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHH---HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHh
Confidence 44556677788899999999999999999999888764 456777777
No 232
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=23.89 E-value=39 Score=23.74 Aligned_cols=27 Identities=30% Similarity=0.898 Sum_probs=21.6
Q ss_pred cccccCCCCCCceeeccc--CCC-CCCcCCC
Q 041815 445 KCNGCKRPAFGLMYRCEL--CNF-NLHIPCM 472 (475)
Q Consensus 445 ~c~~c~~~~~~~~~~~~~--~~~-~~~~~~~ 472 (475)
.| .|+.+-.|.+..|+. |.. -.|..|.
T Consensus 18 ~C-~C~~~~~g~MI~CD~~~C~~~wfH~~Cv 47 (71)
T 1wen_A 18 YC-LCHQVSYGEMIGCDNPDCSIEWFHFACV 47 (71)
T ss_dssp CS-TTCCCSCSSEECCSCSSCSCCCEETTTT
T ss_pred EE-ECCCCCCCCEeEeeCCCCCCccEecccC
Confidence 56 699987889999998 664 5788885
No 233
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=23.36 E-value=50 Score=29.66 Aligned_cols=48 Identities=21% Similarity=0.226 Sum_probs=30.1
Q ss_pred CCCeEEEecCCCCc-HHHHHHHHHHcCCcccccCCCCcchhhchHHHHHHHH
Q 041815 334 SVDDVVIVGGSARI-PKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQAAVL 384 (475)
Q Consensus 334 ~i~~VvLvGG~s~~-p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~~ 384 (475)
+++.|+|-||.+.. +.+.+.++ ...++....-.+.+.++||+.++...
T Consensus 214 dP~~IvlgG~i~~~~~~~~~~~~---~~~~i~~s~l~~~a~~~GAa~l~~~~ 262 (267)
T 1woq_A 214 SPELFIVGGGISKRADEYLPNLR---LRTPIVPAVLRNEAGIVGAAIEIALQ 262 (267)
T ss_dssp CCSEEEEESGGGGGGGGTGGGCC---CSSCEEECSCSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeChhhcccHHHHHhhc---cCceEEECCcCCcHHHHHHHHHHHhc
Confidence 35789999988764 33333332 12345444455678999999887543
No 234
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=22.88 E-value=89 Score=27.51 Aligned_cols=39 Identities=13% Similarity=0.189 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHH
Q 041815 314 FRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQ 352 (475)
Q Consensus 314 ~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~ 352 (475)
.+.+...|+++|++++++..++|.|.++=|-+...++|-
T Consensus 35 ~~~l~~~i~~~L~~a~~~~~did~Iav~~GPGsftglRi 73 (231)
T 2gel_A 35 TQRILPMVQEILAASGASLNEIDALAFGRGPGSFTGVRI 73 (231)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCSEEEEECCSSCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCChhHhHHH
Confidence 344678888999999999999999999888777777763
No 235
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=22.72 E-value=51 Score=19.18 Aligned_cols=24 Identities=21% Similarity=0.593 Sum_probs=20.4
Q ss_pred ccccccccCCCCCCceeecccCCC
Q 041815 442 TLSKCNGCKRPAFGLMYRCELCNF 465 (475)
Q Consensus 442 ~~~~c~~c~~~~~~~~~~~~~~~~ 465 (475)
..+.|..|+-.-..++..|..|.-
T Consensus 5 gDW~C~~C~~~Nfa~R~~C~~C~~ 28 (33)
T 2k1p_A 5 NDWQCKTCSNVNWARRSECNMCNT 28 (33)
T ss_dssp SSCBCSSSCCBCCTTCSBCSSSCC
T ss_pred CCcccCCCCCccccccccccccCC
Confidence 347899999999999999988864
No 236
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=22.70 E-value=1.7e+02 Score=29.28 Aligned_cols=31 Identities=16% Similarity=0.420 Sum_probs=25.0
Q ss_pred CceEEEEEeCCCceEEEEEEEeCCeEEEEEE
Q 041815 196 EKNVLIFDLGGGTFDVSLLTIEKGIFKVKAT 226 (475)
Q Consensus 196 ~~~vlvvD~Gggt~dvsv~~~~~~~~~v~~~ 226 (475)
...+.++|+|..++-+.|++..++.++++..
T Consensus 10 ~~~~AaIDiGSNSirL~I~~~~~~~~~~l~~ 40 (513)
T 1u6z_A 10 PQEFAAVDLGSNSFHMVIARVVDGAMQIIGR 40 (513)
T ss_dssp --CEEEEEECSSCEEEEEEEEETTEEEEEEE
T ss_pred CCeEEEEEeccccEEEEEEEEcCCeeEEEEe
Confidence 4569999999999999999998877765544
No 237
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=22.63 E-value=74 Score=30.66 Aligned_cols=47 Identities=11% Similarity=0.084 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCC-CcHHHHHHHHHHcC
Q 041815 309 LNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSA-RIPKVQQLLQEFFN 359 (475)
Q Consensus 309 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s-~~p~v~~~l~~~~~ 359 (475)
+++-...++...|-...... .++|.|+++||-+ +.+.+++.|.+.+.
T Consensus 302 a~d~f~yriak~Iga~aa~L----G~vDaIVfTGGIgEns~~vr~~I~~~l~ 349 (398)
T 4ijn_A 302 AYDVYIHRLRKYIGAYMAVL----GRTDVISFTAGVGENVPPVRRDALAGLG 349 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----SSCCEEEEEHHHHHHCHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHHHHHHHHHh----CCCcEEEECCccccccHHHHHHHHHHHh
Confidence 34444444444444433332 2489999999988 67889999998763
No 238
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=22.54 E-value=21 Score=31.95 Aligned_cols=29 Identities=31% Similarity=0.831 Sum_probs=25.6
Q ss_pred cccccccCCCCCCceeecccCCCCCCcCCC
Q 041815 443 LSKCNGCKRPAFGLMYRCELCNFNLHIPCM 472 (475)
Q Consensus 443 ~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~ 472 (475)
.-.|..|+.--. +..+|..|+--+|..|.
T Consensus 180 i~~C~iC~~iv~-~g~~C~~C~~~~H~~C~ 208 (238)
T 3nw0_A 180 VKICNICHSLLI-QGQSCETCGIRMHLPCV 208 (238)
T ss_dssp CCBCTTTCSBCS-SCEECSSSCCEECHHHH
T ss_pred CCcCcchhhHHh-CCcccCccChHHHHHHH
Confidence 468999999887 57999999999999996
No 239
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=22.51 E-value=22 Score=24.32 Aligned_cols=27 Identities=26% Similarity=0.661 Sum_probs=20.8
Q ss_pred cccccCCCCCCceeecccCC---CCCCcCCC
Q 041815 445 KCNGCKRPAFGLMYRCELCN---FNLHIPCM 472 (475)
Q Consensus 445 ~c~~c~~~~~~~~~~~~~~~---~~~~~~~~ 472 (475)
-| .|+.+..|.+..|+.|+ ==.|..|.
T Consensus 13 yC-~C~~~~~g~MI~CD~c~C~~~WfH~~Cv 42 (62)
T 2g6q_A 13 YC-LCNQVSYGEMIGCDNEQCPIEWFHFSCV 42 (62)
T ss_dssp ET-TTTEECCSEEEECSCTTCSSCEEETGGG
T ss_pred EE-ECCCCCCCCeeeeeCCCCCcccEecccC
Confidence 46 79998888899999855 45688874
No 240
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=22.49 E-value=36 Score=23.93 Aligned_cols=28 Identities=18% Similarity=0.387 Sum_probs=21.0
Q ss_pred CcccccccccCCC---CCCceeecccCCCCC
Q 041815 440 HKTLSKCNGCKRP---AFGLMYRCELCNFNL 467 (475)
Q Consensus 440 ~~~~~~c~~c~~~---~~~~~~~~~~~~~~~ 467 (475)
++..|+|.-|+.. -.+...+|++|...|
T Consensus 25 ~~v~Y~C~~CG~~~e~~~~d~irCp~CG~RI 55 (70)
T 1twf_L 25 ATLKYICAECSSKLSLSRTDAVRCKDCGHRI 55 (70)
T ss_dssp CCCCEECSSSCCEECCCTTSTTCCSSSCCCC
T ss_pred ceEEEECCCCCCcceeCCCCCccCCCCCceE
Confidence 5666999999987 225567899999843
No 241
>2vg3_A Undecaprenyl pyrophosphate synthetase; transferase, cell WALL biogenesis/degradation, cell cycle, P transferase; HET: GPP; 1.8A {Mycobacterium tuberculosis} PDB: 2vg2_A* 2vg4_A
Probab=22.32 E-value=3.9e+02 Score=24.26 Aligned_cols=59 Identities=20% Similarity=0.229 Sum_probs=37.1
Q ss_pred cCCceeEEEEeccccCccceEEEcHHHHHHHHHHHHHHHH-----------HHHHHHHHhCCCCCCCCCeEEEecCCCCc
Q 041815 279 SSTSQTTIEIDSLYEGIDFSSVMTRARFEELNMDLFRKCI-----------KHVDMCLRTGKTDNSSVDDVVIVGGSARI 347 (475)
Q Consensus 279 s~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~-----------~~i~~~l~~~~~~~~~i~~VvLvGG~s~~ 347 (475)
..+....+.+-.-++ .|+|+.++++.+.++.. +.+.+.|..+++ .++|-++-+||-.|+
T Consensus 170 ~~n~~l~Lnia~~Yg--------GR~EIv~A~r~la~~v~~g~l~~~dI~e~~i~~~L~t~~~--PdPDLlIRTsGE~RL 239 (284)
T 2vg3_A 170 KSNDVITINYCVNYG--------GRTEITEATREIAREVAAGRLNPERITESTIARHLQRPDI--PDVDLFLRTSGEQRS 239 (284)
T ss_dssp TTCCSEEEEEEEEEC--------HHHHHHHHHHHHHHHHHTTSSCGGGCCHHHHHHHSSSTTC--CCCSEEEECTTCCCC
T ss_pred cCCCceEEEEEecCC--------CHHHHHHHHHHHHHHHHcCCCChHHCCHHHHHHHhccCCC--CCCcEEEeCCCCccc
Confidence 344555555544344 38888888888776532 345555554433 368999999997665
No 242
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=21.79 E-value=43 Score=25.69 Aligned_cols=29 Identities=24% Similarity=0.595 Sum_probs=25.3
Q ss_pred ccccccCCCCC-CceeecccCCCCCCcCCC
Q 041815 444 SKCNGCKRPAF-GLMYRCELCNFNLHIPCM 472 (475)
Q Consensus 444 ~~c~~c~~~~~-~~~~~~~~~~~~~~~~~~ 472 (475)
-.|..|+..|. ..+..|..|.--.|..|.
T Consensus 8 ~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl 37 (111)
T 2ysm_A 8 ANCAVCDSPGDLLDQFFCTTCGQHYHGMCL 37 (111)
T ss_dssp SCBTTTCCCCCTTTSEECSSSCCEECTTTT
T ss_pred CCCcCCCCCCCCcCCeECCCCCCCcChHHh
Confidence 47999999987 567899999999999995
No 243
>3nwp_A 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, hydrolase; HET: MSE P6G PG4; 1.40A {Shewanella baltica}
Probab=21.73 E-value=1.3e+02 Score=26.50 Aligned_cols=46 Identities=20% Similarity=0.232 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHHH
Q 041815 307 EELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQEF 357 (475)
Q Consensus 307 ~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~ 357 (475)
+++.+.+.+.+.+.+++++++.+ .-.+.|.||+|-.+..+...+..
T Consensus 15 ~~l~~~~A~~i~~~i~~~i~~~~-----~~~l~lsgGstp~~~y~~L~~~~ 60 (233)
T 3nwp_A 15 SALEQQLASKIASQLQEAVDARG-----KASLVVSGGSTPLKLFQLLSMKS 60 (233)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS-----CEEEEECCSSTTHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC-----CEEEEEcCCCCHHHHHHHHHhcC
Confidence 33444455556666677776522 23788999999998888887643
No 244
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=21.35 E-value=24 Score=24.41 Aligned_cols=31 Identities=23% Similarity=0.418 Sum_probs=23.9
Q ss_pred ccccccccCCCCC--Cceeecc-cCCCCCCcCCC
Q 041815 442 TLSKCNGCKRPAF--GLMYRCE-LCNFNLHIPCM 472 (475)
Q Consensus 442 ~~~~c~~c~~~~~--~~~~~~~-~~~~~~~~~~~ 472 (475)
..+.|-.|+.|-. ..+..|+ .|+-=.|..|.
T Consensus 7 ~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cv 40 (65)
T 2vpb_A 7 PVYPCGICTNEVNDDQDAILCEASCQKWFHRICT 40 (65)
T ss_dssp --CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHH
T ss_pred CcCcCccCCCccCCCCCeEecccCccccCchhcc
Confidence 4489999999843 4677899 99988898774
No 245
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=21.23 E-value=24 Score=23.88 Aligned_cols=27 Identities=26% Similarity=0.735 Sum_probs=20.8
Q ss_pred cccccCCCCCCceeecccCC--C-CCCcCCC
Q 041815 445 KCNGCKRPAFGLMYRCELCN--F-NLHIPCM 472 (475)
Q Consensus 445 ~c~~c~~~~~~~~~~~~~~~--~-~~~~~~~ 472 (475)
-| .|+.+..|.+..|+.|| . -.|..|.
T Consensus 12 ~C-~C~~~~~g~mi~CD~cdC~~~wfH~~Cv 41 (60)
T 2vnf_A 12 YC-LCHQVSYGEMIGCDNPDCSIEWFHFACV 41 (60)
T ss_dssp ET-TTTEECCSEEEECSCTTCSSCEEETGGG
T ss_pred EE-ECCCcCCCCEEEeCCCCCCCceEehhcC
Confidence 46 79998888999999844 3 4788885
No 246
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=21.04 E-value=24 Score=25.08 Aligned_cols=28 Identities=29% Similarity=0.683 Sum_probs=22.8
Q ss_pred ccccccCCCCC-CceeecccCCCCCCcCCC
Q 041815 444 SKCNGCKRPAF-GLMYRCELCNFNLHIPCM 472 (475)
Q Consensus 444 ~~c~~c~~~~~-~~~~~~~~~~~~~~~~~~ 472 (475)
-.| .|+.+.. +.+..|+.|+-=.|..|.
T Consensus 17 ~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cv 45 (76)
T 1wem_A 17 LYC-ICRQPHNNRFMICCDRCEEWFHGDCV 45 (76)
T ss_dssp CCS-TTCCCCCSSCEEECSSSCCEEEHHHH
T ss_pred CEE-ECCCccCCCCEEEeCCCCCcEeCeEE
Confidence 356 7999977 588999999988898884
No 247
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=20.82 E-value=2.3e+02 Score=25.87 Aligned_cols=49 Identities=27% Similarity=0.276 Sum_probs=33.3
Q ss_pred CCeEEEecCCCC-cHHHHHHHHHHcC---------CcccccCCCCcchhhchHHHHHHH
Q 041815 335 VDDVVIVGGSAR-IPKVQQLLQEFFN---------GKRLCKNINPDEAVAYGAAVQAAV 383 (475)
Q Consensus 335 i~~VvLvGG~s~-~p~v~~~l~~~~~---------~~~v~~~~~p~~ava~Gaa~~a~~ 383 (475)
++.|+|.||.+. .+.+.+.+++.+. ..++......+.+.++||+.++..
T Consensus 263 p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~~ 321 (326)
T 2qm1_A 263 PDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLALQ 321 (326)
T ss_dssp CSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGGG
T ss_pred CCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHHH
Confidence 578999999886 5777666666542 223444445567889999988653
No 248
>1kcf_A Hypothetical 30.2 KD protein C25G10.02 in chromosome I; beta-alpha-beta motif, RUVC resolvase family, hydrolase; 2.30A {Schizosaccharomyces pombe} SCOP: a.140.2.1 c.55.3.7
Probab=20.62 E-value=1.2e+02 Score=27.37 Aligned_cols=32 Identities=16% Similarity=0.213 Sum_probs=23.6
Q ss_pred CCEEEEecCCccEEEEEEECCcEEEEecCCCCcccceEEEEc
Q 041815 7 APAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT 48 (475)
Q Consensus 7 ~~vvGIDlGTt~s~va~~~~g~~~vi~~~~g~~~~Ps~v~~~ 48 (475)
+.|++||+|..|...|...+ +....|+++.+.
T Consensus 40 ~sIlSID~GikNlAyc~l~~----------~~~~~p~l~~W~ 71 (258)
T 1kcf_A 40 SRVLGIDLGIKNFSYCFASQ----------NEDSKVIIHNWS 71 (258)
T ss_dssp SSEEEEEECSTTEEEEEEEE----------CTTSCEEEEEEE
T ss_pred CcEEEEecCCCceEEEEEcc----------CCCCCCeeecce
Confidence 38999999999999998752 223456666664
No 249
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=20.41 E-value=1.8e+02 Score=28.29 Aligned_cols=69 Identities=17% Similarity=0.254 Sum_probs=48.8
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHcCCceeeeeechHH-HHHHhhhccCCC------CC--------------ceEEE
Q 041815 143 VSNAVVTVPAYFTDSQRQATKDAGAMAGLNVLKIISEPTA-AAIAYGLDRKAT------SE--------------KNVLI 201 (475)
Q Consensus 143 ~~~~vitVP~~~~~~~r~~l~~a~~~agl~~~~~i~Ep~A-aa~~~~~~~~~~------~~--------------~~vlv 201 (475)
+.++|++.|+. ---.+.-|+..+|.+.+.-+--..| ||++|+...-.+ ++ ...+=
T Consensus 154 V~~Iv~~tPp~----i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~~G~Vg 229 (434)
T 1kae_A 154 CKKVVLCSPPP----IADEILYAAQLCGVQDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAA 229 (434)
T ss_dssp CSEEEEEECSS----CCHHHHHHHHHTTCCEEEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHCTTSCE
T ss_pred CCeEEEECCCC----CCHHHHHHHHHcCCCEEeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhhcCccc
Confidence 56889999982 2246788999999999999999888 678998643221 01 11233
Q ss_pred EEeCCCceEEEEEE
Q 041815 202 FDLGGGTFDVSLLT 215 (475)
Q Consensus 202 vD~Gggt~dvsv~~ 215 (475)
+|+=+|-+++-|+-
T Consensus 230 IDm~AGPSEilViA 243 (434)
T 1kae_A 230 IDMPAGPSEVLVIA 243 (434)
T ss_dssp ESCCCCCCEEEEEE
T ss_pred cCCCCCCceEEEEe
Confidence 88888888877765
No 250
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=20.35 E-value=57 Score=20.90 Aligned_cols=8 Identities=63% Similarity=1.402 Sum_probs=3.8
Q ss_pred eecccCCC
Q 041815 458 YRCELCNF 465 (475)
Q Consensus 458 ~~~~~~~~ 465 (475)
|.|..|+.
T Consensus 31 ~~C~~C~~ 38 (60)
T 2adr_A 31 YPCGLCNR 38 (60)
T ss_dssp EECTTTCC
T ss_pred ccCCCCCC
Confidence 44544443
No 251
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=20.22 E-value=98 Score=28.02 Aligned_cols=43 Identities=21% Similarity=0.468 Sum_probs=31.4
Q ss_pred CCCeEEEecCCCCcHHHHHHHHHHcCCcccccCCCCcchhhchHHHH
Q 041815 334 SVDDVVIVGGSARIPKVQQLLQEFFNGKRLCKNINPDEAVAYGAAVQ 380 (475)
Q Consensus 334 ~i~~VvLvGG~s~~p~v~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~ 380 (475)
.+|.|+| |++.+|++.+.|++.++ ..+ .-+||-+++|.-+.-+
T Consensus 178 g~D~iVL--GCTh~pll~~~i~~~~~-~~v-~vIDs~~~~a~~~~~~ 220 (269)
T 3ist_A 178 KIDTVIL--GCTHYPLLKPIIENFMG-DGV-AVINSGEETASEVSAL 220 (269)
T ss_dssp CCCEEEE--CSTTGGGGHHHHHHHHC-TTS-EEECTHHHHHHHHHHH
T ss_pred CCCEEEE--CCCCHHHHHHHHHHHcC-CCC-eEECcHHHHHHHHHHH
Confidence 4677776 88999999999999984 222 2247888777766543
No 252
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=20.13 E-value=50 Score=23.11 Aligned_cols=30 Identities=27% Similarity=0.578 Sum_probs=23.9
Q ss_pred ccccccccCCCC-CC-ceeecccCCCCCCcCCC
Q 041815 442 TLSKCNGCKRPA-FG-LMYRCELCNFNLHIPCM 472 (475)
Q Consensus 442 ~~~~c~~c~~~~-~~-~~~~~~~~~~~~~~~~~ 472 (475)
..-.| .|+.+- .| .+..|+.|+-=.|..|.
T Consensus 15 ~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cv 46 (72)
T 1wee_A 15 WKVDC-KCGTKDDDGERMLACDGCGVWHHTRCI 46 (72)
T ss_dssp SEECC-TTCCCSCCSSCEEECSSSCEEEETTTT
T ss_pred cceEe-eCCCccCCCCcEEECCCCCCccCCeee
Confidence 34578 599985 45 68999999988899986
No 253
>3lhi_A Putative 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.33A {Neisseria gonorrhoeae}
Probab=20.12 E-value=1.4e+02 Score=26.27 Aligned_cols=45 Identities=18% Similarity=0.155 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeEEEecCCCCcHHHHHHHHH
Q 041815 307 EELNMDLFRKCIKHVDMCLRTGKTDNSSVDDVVIVGGSARIPKVQQLLQE 356 (475)
Q Consensus 307 ~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~ 356 (475)
+++.+.+.+.+.+.+++++++.+ .-.+.|.||+|-.+..+..++.
T Consensus 12 ~~l~~~~A~~i~~~i~~~i~~~~-----~~~l~lsgGstp~~~y~~L~~~ 56 (232)
T 3lhi_A 12 AEAAQSLADAVADALQGALDEKG-----GAVLAVSGGRSPIAFFNALSQK 56 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS-----CEEEEECCSSTTHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC-----CEEEEEeCCCCHHHHHHHHHhc
Confidence 34445555666667777776522 2378899999998888887754
Done!