BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041816
(396 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 258 bits (659), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 125/326 (38%), Positives = 198/326 (60%), Gaps = 11/326 (3%)
Query: 71 KERCKSSGQGDITAITPNEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLF 130
+ER +S I I ++A +F M+ RP P L F+ F +A+TK ++ VL
Sbjct: 57 RERLRSG----IVDIKKDDAIALFQEMIRSRP-LPSLVDFSRFFSAIARTKQFNLVLDFC 111
Query: 131 KRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAE 190
K+L G+ ++YT NI+INCFC+ + + VLG++++ + PD F +LIKGL E
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 171
Query: 191 SRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCK 250
++ EA L ++ GC+P+V+TY++++NG+CR+G T +AL+L +M N K
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN------VK 225
Query: 251 PNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCL 310
+ TY+TIID LC++G +D A LF +M+ K I VVTYNSL+ G C A WN+ L
Sbjct: 226 ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALL 285
Query: 311 LIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCL 370
L +M+ + + P+V+TFNV++D K GK+ EA+ L + MI RG++PN T++TLMDG+C+
Sbjct: 286 LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM 345
Query: 371 TGRVNHAKELFVSMESMGCKHTVFSY 396
R++ A + M C + ++
Sbjct: 346 QNRLSEANNMLDLMVRNKCSPDIVTF 371
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 155/288 (53%), Gaps = 6/288 (2%)
Query: 101 RPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 160
R P + +FN+L K L+K + + G+ P++ TYN L++ +C R+S
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351
Query: 161 GFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLIN 220
+L ++R+ +PD V FTSLIKG C R+ + +F + G N +TYS L+
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411
Query: 221 GLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMK 280
G C++G +A LF+EM + GV+ P+ +TY ++DGLC G ++KA E+F ++
Sbjct: 412 GFCQSGKIKLAEELFQEMVS----HGVL--PDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465
Query: 281 DKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMD 340
++ +V Y ++I G C +A L + +GV+P+V+T+ V++ LCK G +
Sbjct: 466 KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLS 525
Query: 341 EASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMG 388
EA+ LL M G PN T++TL+ G + + +L M+S G
Sbjct: 526 EANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 152/296 (51%), Gaps = 6/296 (2%)
Query: 101 RPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 160
R + +++ + L + D +SLFK + + G+ + TYN L+ CK G+ +
Sbjct: 222 RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWND 281
Query: 161 GFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLIN 220
G ++L ++ P+ + F L+ E ++ EA L+ ++ G PN+ITY+TL++
Sbjct: 282 GALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341
Query: 221 GLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMK 280
G C A N+ + M C P+ VT+T++I G C VD ++F +
Sbjct: 342 GYCMQNRLSEANNMLDLMVRNK------CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 281 DKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMD 340
+ + + VTY+ L+ GFC + A L EM+ GV PDV+T+ +++D LC NGK++
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455
Query: 341 EASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
+A + E + ++ ++T+++G C G+V A LF S+ G K V +Y
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511
Score = 139 bits (350), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 145/282 (51%), Gaps = 6/282 (2%)
Query: 107 LTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 166
+ ++N L L K ++ L K + S + P++ T+N+L++ F K G++ +
Sbjct: 263 VVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYK 322
Query: 167 RILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTG 226
++ +P+ + + +L+ G C ++R+ EA + + C P+++T+++LI G C
Sbjct: 323 EMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVK 382
Query: 227 HTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINP 286
+ +F ++ K G+V N VTY+ ++ G C+ G + A+ELF +M + P
Sbjct: 383 RVDDGMKVFRNIS----KRGLV--ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 436
Query: 287 DVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLL 346
DV+TY L+ G C +A + ++ + +V + I++ +CK GK+++A L
Sbjct: 437 DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLF 496
Query: 347 ELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMG 388
+ +GV PN T++ ++ G C G ++ A L ME G
Sbjct: 497 CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 243 bits (621), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 130/356 (36%), Positives = 201/356 (56%), Gaps = 45/356 (12%)
Query: 76 SSGQGDITAITPNEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNS 135
SSG + I ++A +F M+ RP P + FN LF +AKTK Y+ VL+L K++ S
Sbjct: 61 SSG---LVGIKADDAVDLFRDMIQSRP-LPTVIDFNRLFSAIAKTKQYELVLALCKQMES 116
Query: 136 TGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIME 195
G+ +YT +I+INCFC+ ++S+ F +G+I++ + PD V F +L+ GLC E R+ E
Sbjct: 117 KGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSE 176
Query: 196 AAALFTKLKAFGCKPNVITYSTLINGL--------------------------------- 222
A L ++ G KP +IT +TL+NGL
Sbjct: 177 ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN 236
Query: 223 --CRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMK 280
C++G T +A+ L +M N K + V Y+ IIDGLCK+G +D A LF +M+
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKL------DAVKYSIIIDGLCKDGSLDNAFNLFNEME 290
Query: 281 DKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMD 340
K D++TYN+LI GFC A W++ LL +M+ + + P+VVTF+V++D K GK+
Sbjct: 291 IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLR 350
Query: 341 EASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
EA +LL+ M+ RG+ PNT T+++L+DGFC R+ A ++ M S GC + ++
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTF 406
Score = 187 bits (474), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 165/309 (53%), Gaps = 7/309 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+EA + D M+ M P +T L+ G K D V+ L R+ TG P+ TY
Sbjct: 175 SEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV-LIDRMVETGFQPNEVTYGP 233
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
++N CK G+ + +L ++ DAV ++ +I GLC + + A LF +++ G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
K ++ITY+TLI G C G L +M PN VT++ +ID KEG
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK------ISPNVVTFSVLIDSFVKEG 347
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
+ +A +L +M + I P+ +TYNSLI GFC N EA ++ M+ +G PD++TFN
Sbjct: 348 KLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFN 407
Query: 328 VIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESM 387
++++ CK ++D+ L M LRGV NT T++TL+ GFC +G++ AK+LF M S
Sbjct: 408 ILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467
Query: 388 GCKHTVFSY 396
+ + SY
Sbjct: 468 RVRPDIVSY 476
Score = 160 bits (406), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 147/289 (50%), Gaps = 6/289 (2%)
Query: 108 TSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGR 167
++++ L K D +LF + G D+ TYN LI FC GR G +L
Sbjct: 264 VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRD 323
Query: 168 ILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGH 227
+++ +P+ V F+ LI E ++ EA L ++ G PN ITY++LI+G C+
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 228 TIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPD 287
A+ + + M + C P+ +T+ +I+G CK +D ELF +M + + +
Sbjct: 384 LEEAIQMVDLMISKG------CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIAN 437
Query: 288 VVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLE 347
VTYN+L+ GFC + A L EM+ + V+PD+V++ +++D LC NG++++A +
Sbjct: 438 TVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFG 497
Query: 348 LMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
+ + + + ++ G C +V+ A +LF S+ G K +Y
Sbjct: 498 KIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAY 546
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 142/288 (49%), Gaps = 6/288 (2%)
Query: 101 RPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 160
R P + +F++L K L K + G+ P+ TYN LI+ FCK R+
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Query: 161 GFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLIN 220
++ ++ PD + F LI G C +RI + LF ++ G N +TY+TL+
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Query: 221 GLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMK 280
G C++G VA LF+EM + +P+ V+Y ++DGLC G ++KA E+F +++
Sbjct: 447 GFCQSGKLEVAKKLFQEMVSRR------VRPDIVSYKILLDGLCDNGELEKALEIFGKIE 500
Query: 281 DKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMD 340
+ D+ Y +IHG C A+ ++A L + +GV+ D +N+++ ELC+ +
Sbjct: 501 KSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLS 560
Query: 341 EASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMG 388
+A L M G P+ T++ L+ A EL M+S G
Sbjct: 561 KADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSG 608
Score = 149 bits (375), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 158/309 (51%), Gaps = 7/309 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+ AF +F+ M ++ + ++N L G +D L + + + P++ T+++
Sbjct: 280 DNAFNLFNEM-EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
LI+ F K G++ +L +++ P+ + + SLI G C E+R+ EA + + + G
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
C P+++T++ LING C+ L LF EM+ GV+ NTVTY T++ G C+ G
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMS----LRGVI--ANTVTYNTLVQGFCQSG 452
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
++ AK+LF +M + + PD+V+Y L+ G C + +A + ++ ++ D+ +
Sbjct: 453 KLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYM 512
Query: 328 VIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESM 387
+I+ +C K+D+A L + L+GV + ++ ++ C ++ A LF M
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEE 572
Query: 388 GCKHTVFSY 396
G +Y
Sbjct: 573 GHAPDELTY 581
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 122/254 (48%), Gaps = 8/254 (3%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA + D M++ + P + +FN+L K D L LF+ ++ G+ + TYN L
Sbjct: 386 EAIQMVDLMIS-KGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGC 208
+ FC+ G++ + ++ PD V++ L+ GLC + +A +F K++
Sbjct: 445 VQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKM 504
Query: 209 KPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGF 268
+ ++ Y +I+G+C A +LF + K + Y +I LC++
Sbjct: 505 ELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKL------DARAYNIMISELCRKDS 558
Query: 269 VDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNV 328
+ KA LF +M ++ PD +TYN LI +D A L+ EM G DV T +
Sbjct: 559 LSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKM 618
Query: 329 IMDELCKNGKMDEA 342
+++ L +G++D++
Sbjct: 619 VINML-SSGELDKS 631
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 235 bits (599), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 129/361 (35%), Positives = 196/361 (54%), Gaps = 46/361 (12%)
Query: 71 KERCKSSGQGDITAITPNEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLF 130
KER ++ I I N+A +F+ M+ RP P P+ FN L +A+TK YD VL
Sbjct: 39 KERLRNG----IVDIKVNDAIDLFESMIQSRPLPTPI-DFNRLCSAVARTKQYDLVLGFC 93
Query: 131 KRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAE 190
K + G+ D+YT I+INC+C+ ++ F VLGR + + PD + F++L+ G C E
Sbjct: 94 KGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLE 153
Query: 191 SRIMEAAALFTKLKAFGCKPNVITYSTLING----------------------------- 221
R+ EA AL ++ +P+++T STLING
Sbjct: 154 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 213
Query: 222 ------LCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKEL 275
LC++G++ +AL+LF +M N K + V Y+ +ID LCK+G D A L
Sbjct: 214 GPVLNRLCKSGNSALALDLFRKMEERN------IKASVVQYSIVIDSLCKDGSFDDALSL 267
Query: 276 FLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCK 335
F +M+ K I DVVTY+SLI G C W++ +L EM+ + + PDVVTF+ ++D K
Sbjct: 268 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 327
Query: 336 NGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFS 395
GK+ EA L MI RG+ P+T T+++L+DGFC ++ A ++F M S GC+ + +
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 387
Query: 396 Y 396
Y
Sbjct: 388 Y 388
Score = 172 bits (437), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 154/296 (52%), Gaps = 6/296 (2%)
Query: 101 RPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 160
R + ++++ L K +D LSLF + G+ D+ TY+ LI C G+
Sbjct: 239 RNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDD 298
Query: 161 GFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLIN 220
G +L ++ PD V F++LI E +++EA L+ ++ G P+ ITY++LI+
Sbjct: 299 GAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID 358
Query: 221 GLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMK 280
G C+ A +F+ M + C+P+ VTY+ +I+ CK VD LF ++
Sbjct: 359 GFCKENCLHEANQMFDLMVSKG------CEPDIVTYSILINSYCKAKRVDDGMRLFREIS 412
Query: 281 DKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMD 340
K + P+ +TYN+L+ GFC + N A L EM+ +GV P VVT+ +++D LC NG+++
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472
Query: 341 EASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
+A + E M + ++ ++ G C +V+ A LF S+ G K V +Y
Sbjct: 473 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTY 528
Score = 167 bits (424), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 163/309 (52%), Gaps = 7/309 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
++A +F+ M M+ + +++ L G L +D + + + + PD+ T++
Sbjct: 262 DDALSLFNEM-EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
LI+ F K G++ + ++ PD + + SLI G C E+ + EA +F + + G
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
C+P+++TYS LIN C+ + LF E+++ G++ PNT+TY T++ G C+ G
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSK----GLI--PNTITYNTLVLGFCQSG 434
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
++ AKELF +M + + P VVTY L+ G C + N+A + +M + + +N
Sbjct: 435 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYN 494
Query: 328 VIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESM 387
+I+ +C K+D+A L + +GV P+ T++ ++ G C G ++ A LF M+
Sbjct: 495 IIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED 554
Query: 388 GCKHTVFSY 396
GC F+Y
Sbjct: 555 GCTPDDFTY 563
Score = 149 bits (376), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 136/278 (48%), Gaps = 7/278 (2%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA +++ M+ R P ++N L K +F + S G PD+ TY+IL
Sbjct: 333 EAKELYNEMIT-RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 391
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGC 208
IN +CK RV G + I P+ + + +L+ G C ++ A LF ++ + G
Sbjct: 392 INSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 451
Query: 209 KPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGF 268
P+V+TY L++GLC G AL +FE+M G+ Y II G+C
Sbjct: 452 PPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIG------IYNIIIHGMCNASK 505
Query: 269 VDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNV 328
VD A LF + DK + PDVVTYN +I G C +EA+ L +M + G PD T+N+
Sbjct: 506 VDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNI 565
Query: 329 IMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMD 366
++ + + L+E M + G + ++ST ++D
Sbjct: 566 LIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 603
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
N+A IF+ M R + + +N++ + D SLF L+ G+ PD+ TYN+
Sbjct: 472 NKALEIFEKMQKSRMTLG-IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 530
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
+I CK G +S ++ ++ TPD + LI+ S ++ + L ++K G
Sbjct: 531 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCG 590
Query: 208 CKPNVITYSTLINGL 222
+ T +I+ L
Sbjct: 591 FSADSSTIKMVIDML 605
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 233 bits (594), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/361 (36%), Positives = 206/361 (57%), Gaps = 46/361 (12%)
Query: 71 KERCKSSGQGDITAITPNEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLF 130
+ER +S G DI A ++A +F M++ RP P + F+ LF +AKTK YD VL+L
Sbjct: 57 RERLRS-GLVDIKA---DDAIDLFRDMIHSRP-LPTVIDFSRLFSAIAKTKQYDLVLALC 111
Query: 131 KRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAE 190
K++ G+ +LYT +I+INCFC+ ++ F +G+I++ + P+ + F++LI GLC E
Sbjct: 112 KQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLE 171
Query: 191 SRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCK 250
R+ EA L ++ G KP++IT +TL+NGLC +G A+ L ++M ++G C+
Sbjct: 172 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV----EYG--CQ 225
Query: 251 PNTVT-----------------------------------YTTIIDGLCKEGFVDKAKEL 275
PN VT Y+ IIDGLCK G +D A L
Sbjct: 226 PNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNL 285
Query: 276 FLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCK 335
F +M+ K I +++TYN LI GFC A W++ LL +M+ + + P+VVTF+V++D K
Sbjct: 286 FNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK 345
Query: 336 NGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFS 395
GK+ EA L + MI RG+ P+T T+++L+DGFC ++ A ++ M S GC + +
Sbjct: 346 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT 405
Query: 396 Y 396
+
Sbjct: 406 F 406
Score = 165 bits (417), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 148/289 (51%), Gaps = 6/289 (2%)
Query: 108 TSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGR 167
++++ L K D +LF + G+ ++ TYNILI FC GR G +L
Sbjct: 264 VKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRD 323
Query: 168 ILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGH 227
+++ P+ V F+ LI E ++ EA L ++ G P+ ITY++LI+G C+ H
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 383
Query: 228 TIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPD 287
A + + M + C PN T+ +I+G CK +D ELF +M + + D
Sbjct: 384 LDKANQMVDLMVSKG------CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVAD 437
Query: 288 VVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLE 347
VTYN+LI GFC N A L EM+ + V P++VT+ +++D LC NG+ ++A + E
Sbjct: 438 TVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFE 497
Query: 348 LMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
+ + + ++ ++ G C +V+ A +LF S+ G K V +Y
Sbjct: 498 KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTY 546
Score = 159 bits (402), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 163/309 (52%), Gaps = 7/309 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+ AF +F+ M M+ + ++N+L G +D L + + + P++ T+++
Sbjct: 280 DNAFNLFNEM-EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
LI+ F K G++ + ++ PD + +TSLI G C E+ + +A + + + G
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
C PN+ T++ LING C+ L LF +M+ GVV +TVTY T+I G C+ G
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMS----LRGVV--ADTVTYNTLIQGFCELG 452
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
++ AKELF +M + + P++VTY L+ G C + +A + ++ ++ D+ +N
Sbjct: 453 KLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYN 512
Query: 328 VIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESM 387
+I+ +C K+D+A L + L+GV P T++ ++ G C G ++ A+ LF ME
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEED 572
Query: 388 GCKHTVFSY 396
G ++Y
Sbjct: 573 GHAPDGWTY 581
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 150/297 (50%), Gaps = 7/297 (2%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA + D M+ P +T + + + K+ + L +++ + D Y+I+
Sbjct: 211 EAMLLIDKMVEYGCQPNAVT-YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSII 269
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGC 208
I+ CK G + + F + + T + + + LI G C R + A L +
Sbjct: 270 IDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI 329
Query: 209 KPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGF 268
PNV+T+S LI+ + G A L +EM + G+ P+T+TYT++IDG CKE
Sbjct: 330 NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR----GIA--PDTITYTSLIDGFCKENH 383
Query: 269 VDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNV 328
+DKA ++ M K +P++ T+N LI+G+C AN ++ L +M +GV D VT+N
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 329 IMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSME 385
++ C+ GK++ A L + M+ R V PN T+ L+DG C G A E+F +E
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE 500
Score = 145 bits (365), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 138/288 (47%), Gaps = 6/288 (2%)
Query: 101 RPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 160
R P + +F++L K L K + G+ PD TY LI+ FCK +
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386
Query: 161 GFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLIN 220
++ ++ P+ F LI G C +RI + LF K+ G + +TY+TLI
Sbjct: 387 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 446
Query: 221 GLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMK 280
G C G VA LF+EM + PN VTY ++DGLC G +KA E+F +++
Sbjct: 447 GFCELGKLNVAKELFQEMVSRK------VPPNIVTYKILLDGLCDNGESEKALEIFEKIE 500
Query: 281 DKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMD 340
+ D+ YN +IHG C A+ ++A L + +GV+P V T+N+++ LCK G +
Sbjct: 501 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLS 560
Query: 341 EASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMG 388
EA L M G P+ T++ L+ G + +L ++ G
Sbjct: 561 EAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 608
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 137/278 (49%), Gaps = 7/278 (2%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA + M++ +P +T +L+ G K H D + + S G P++ T+NIL
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLIDG-FCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 409
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGC 208
IN +CK R+ G + ++ D V + +LI+G C ++ A LF ++ +
Sbjct: 410 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 469
Query: 209 KPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGF 268
PN++TY L++GLC G + AL +FE++ + + Y II G+C
Sbjct: 470 PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIG------IYNIIIHGMCNASK 523
Query: 269 VDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNV 328
VD A +LF + K + P V TYN +I G C +EA L +M + G PD T+N+
Sbjct: 524 VDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNI 583
Query: 329 IMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMD 366
++ +G ++ +L+E + G + + ST ++D
Sbjct: 584 LIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 621
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 231 bits (588), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 127/367 (34%), Positives = 198/367 (53%), Gaps = 50/367 (13%)
Query: 73 RCKSSGQGDITAITPN--------EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYD 124
R SSG GD I N +A +F M+ RP P + FN L +AK K +D
Sbjct: 44 RAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRP-LPSIFEFNKLLSAIAKMKKFD 102
Query: 125 TVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR-------------- 170
V+SL +++ G+ +LYTYNILINCFC+ ++S +LG++++
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 171 ---------------------SCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCK 209
+ PD + FT+LI GL ++ EA AL ++ GC+
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 210 PNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFV 269
PN++TY ++NGLC+ G +A NL +M + N V Y+T+ID LCK
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK------IEANVVIYSTVIDSLCKYRHE 276
Query: 270 DKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVI 329
D A LF +M++K + P+V+TY+SLI C W++A+ LL +M+++ + P+VVTFN +
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNAL 336
Query: 330 MDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGC 389
+D K GK+ EA +L + MI R ++P+ T+S+L++GFC+ R++ AK +F M S C
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 390 KHTVFSY 396
V +Y
Sbjct: 397 FPNVVTY 403
Score = 187 bits (476), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 158/287 (55%), Gaps = 6/287 (2%)
Query: 110 FNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 169
++ + L K +H D L+LF + + G+ P++ TY+ LI+C C R S +L ++
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 170 RSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTI 229
P+ V F +LI E +++EA L+ ++ P++ TYS+LING C
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 230 VALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVV 289
A ++FE M + + C PN VTY T+I+G CK +D+ ELF +M + + + V
Sbjct: 383 EAKHMFELMISKD------CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTV 436
Query: 290 TYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELM 349
TY +LIHGF A D + A + +M+ GV P+++T+N ++D LCKNGK+++A + E +
Sbjct: 437 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 496
Query: 350 ILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
+ P T++ +++G C G+V +LF S+ G K V Y
Sbjct: 497 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIY 543
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 158/301 (52%), Gaps = 7/301 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
++A +F M N + P + +++ L CL + + L + + P++ T+N
Sbjct: 277 DDALNLFTEMEN-KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
LI+ F K G++ + +++ PD ++SLI G C R+ EA +F + +
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
C PNV+TY+TLING C+ + LF EM+ + G+V NTVTYTT+I G +
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMS----QRGLV--GNTVTYTTLIHGFFQAR 449
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
D A+ +F QM ++P+++TYN+L+ G C +A + + ++P + T+N
Sbjct: 450 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 509
Query: 328 VIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESM 387
++++ +CK GK+++ L + L+GV P+ ++T++ GFC G A LF M
Sbjct: 510 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRED 569
Query: 388 G 388
G
Sbjct: 570 G 570
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 230 bits (587), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 126/355 (35%), Positives = 194/355 (54%), Gaps = 34/355 (9%)
Query: 71 KERCKSSGQGDITAITPNEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLF 130
+ER +S I I ++A +F M RP P L F+ LF +A+TK YD VL L
Sbjct: 41 RERLRSG----IVDIKEDDAVDLFQEMTRSRPRPR-LIDFSRLFSVVARTKQYDLVLDLC 95
Query: 131 KRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAE 190
K++ G+ +LYT +I+INC C+ ++S F +G+I++ + PD V F++LI GLC E
Sbjct: 96 KQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155
Query: 191 SRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGK------ 244
R+ EA L ++ G KP +IT + L+NGLC G A+ L + M +
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215
Query: 245 ---FGVVCKP--------------------NTVTYTTIIDGLCKEGFVDKAKELFLQMKD 281
V+CK + V Y+ IIDGLCK+G +D A LF +M+
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
Query: 282 KNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDE 341
K D++ Y +LI GFCYA W++ LL +M+ + + PDVV F+ ++D K GK+ E
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 342 ASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
A L + MI RG++P+T T+++L+DGFC +++ A + M S GC + ++
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTF 390
Score = 178 bits (451), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 162/309 (52%), Gaps = 7/309 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+EA + D M+ M P +T L+ G K D VL L R+ TG P+ TY
Sbjct: 159 SEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL-LIDRMVETGFQPNEVTYGP 217
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
++ CK G+ + +L ++ DAV ++ +I GLC + + A LF +++ G
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
K ++I Y+TLI G C G L +M P+ V ++ +ID KEG
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK------ITPDVVAFSALIDCFVKEG 331
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
+ +A+EL +M + I+PD VTY SLI GFC N ++AN +L M+ +G P++ TFN
Sbjct: 332 KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFN 391
Query: 328 VIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESM 387
++++ CK +D+ L M LRGV +T T++TL+ GFC G++ AKELF M S
Sbjct: 392 ILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451
Query: 388 GCKHTVFSY 396
+ + SY
Sbjct: 452 RVRPDIVSY 460
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 147/289 (50%), Gaps = 6/289 (2%)
Query: 108 TSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGR 167
++++ L K D +LF + G D+ Y LI FC GR G +L
Sbjct: 248 VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRD 307
Query: 168 ILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGH 227
+++ TPD VAF++LI E ++ EA L ++ G P+ +TY++LI+G C+
Sbjct: 308 MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 228 TIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPD 287
A ++ + M + C PN T+ +I+G CK +D ELF +M + + D
Sbjct: 368 LDKANHMLDLMVSKG------CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVAD 421
Query: 288 VVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLE 347
VTYN+LI GFC A L EM+ + V+PD+V++ +++D LC NG+ ++A + E
Sbjct: 422 TVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFE 481
Query: 348 LMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
+ + + ++ ++ G C +V+ A +LF S+ G K V +Y
Sbjct: 482 KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Score = 155 bits (392), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 158/301 (52%), Gaps = 7/301 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+ AF +F+ M ++ + + L +D L + + + PD+ ++
Sbjct: 264 DNAFNLFNEM-EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
LI+CF K G++ + +++ +PD V +TSLI G C E+++ +A + + + G
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
C PN+ T++ LING C+ L LF +M+ GVV +TVTY T+I G C+ G
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMS----LRGVV--ADTVTYNTLIQGFCELG 436
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
++ AKELF +M + + PD+V+Y L+ G C + +A + ++ ++ D+ +N
Sbjct: 437 KLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYN 496
Query: 328 VIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESM 387
+I+ +C K+D+A L + L+GV P+ T++ ++ G C G ++ A LF ME
Sbjct: 497 IIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556
Query: 388 G 388
G
Sbjct: 557 G 557
Score = 151 bits (382), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 141/288 (48%), Gaps = 6/288 (2%)
Query: 101 RPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 160
R P + +F+ L C K L K + G+ PD TY LI+ FCK ++
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 370
Query: 161 GFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLIN 220
+L ++ P+ F LI G C + I + LF K+ G + +TY+TLI
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430
Query: 221 GLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMK 280
G C G VA LF+EM + +P+ V+Y ++DGLC G +KA E+F +++
Sbjct: 431 GFCELGKLEVAKELFQEMVSRR------VRPDIVSYKILLDGLCDNGEPEKALEIFEKIE 484
Query: 281 DKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMD 340
+ D+ YN +IHG C A+ ++A L + +GV+PDV T+N+++ LCK G +
Sbjct: 485 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLS 544
Query: 341 EASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMG 388
EA L M G +PN T++ L+ G + +L ++ G
Sbjct: 545 EADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592
Score = 128 bits (321), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 136/279 (48%), Gaps = 7/279 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
EA + M+ SP +T +L+ G K D + + S G P++ T+NI
Sbjct: 334 REAEELHKEMIQRGISPDTVTYTSLIDG-FCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
LIN +CK + G + ++ D V + +LI+G C ++ A LF ++ +
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
+P++++Y L++GLC G AL +FE++ + + Y II G+C
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIG------IYNIIIHGMCNAS 506
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
VD A +LF + K + PDV TYN +I G C +EA+ L +M + G P+ T+N
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566
Query: 328 VIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMD 366
+++ G ++++L+E + G + + ST ++D
Sbjct: 567 ILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 127/251 (50%), Gaps = 10/251 (3%)
Query: 95 DYMLNMRPSP---PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 151
++ML++ S P + +FN+L K D L LF++++ G+ D TYN LI
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431
Query: 152 FCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPN 211
FC++G++ + ++ PD V++ L+ GLC +A +F K++ + +
Sbjct: 432 FCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD 491
Query: 212 VITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDK 271
+ Y+ +I+G+C A +LF + GV KP+ TY +I GLCK+G + +
Sbjct: 492 IGIYNIIIHGMCNASKVDDAWDLFCSLPLK----GV--KPDVKTYNIMIGGLCKKGSLSE 545
Query: 272 AKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMD 331
A LF +M++ +P+ TYN LI D ++ L+ E+ G D T +++D
Sbjct: 546 ADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605
Query: 332 ELCKNGKMDEA 342
L +G++ ++
Sbjct: 606 ML-SDGRLKKS 615
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 229 bits (585), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/369 (34%), Positives = 198/369 (53%), Gaps = 51/369 (13%)
Query: 72 ERCKSSGQGDITAITPN---------EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKH 122
ER +S GD I N +A +F M+ RP P + FN L +AK
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPS-IVEFNKLLSAVAKMNK 98
Query: 123 YDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTS 182
++ V+SL +++ + G+ DLYTY+I INCFC+ ++S VL ++++ + PD V +S
Sbjct: 99 FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS 158
Query: 183 LIKGLCAESRIM-----------------------------------EAAALFTKLKAFG 207
L+ G C RI EA AL ++ G
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
C+P+++TY T++NGLC+ G +ALNL +M K N V + TIID LCK
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR------IKANVVIFNTIIDSLCKYR 272
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
V+ A +LF +M+ K I P+VVTYNSLI+ C W++A+ LL M+++ + P+VVTFN
Sbjct: 273 HVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFN 332
Query: 328 VIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESM 387
++D K GK+ EA +L E MI R ++P+T T++ L++GFC+ R++ AK++F M S
Sbjct: 333 ALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSK 392
Query: 388 GCKHTVFSY 396
C + +Y
Sbjct: 393 DCLPNIQTY 401
Score = 163 bits (412), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 144/275 (52%), Gaps = 6/275 (2%)
Query: 110 FNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 169
FN + L K +H + + LF + + G+ P++ TYN LINC C GR S +L +L
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 170 RSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTI 229
P+ V F +LI E +++EA L ++ P+ ITY+ LING C
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 230 VALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVV 289
A +F+ M + + C PN TY T+I+G CK V+ ELF +M + + + V
Sbjct: 381 EAKQMFKFMVSKD------CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434
Query: 290 TYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELM 349
TY ++I GF A D + A + +M+ V D++T+++++ LC GK+D A + + +
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Query: 350 ILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSM 384
+ N ++T+++G C G+V A +LF S+
Sbjct: 495 QKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL 529
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 159/338 (47%), Gaps = 30/338 (8%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
++A + D M+ M P T L+ G K + V +L ++ G PDL TY
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV-ALVDQMVQRGCQPDLVTYGT 228
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
++N CK G + +L ++ + + V F ++I LC + A LFT+++ G
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288
Query: 208 CKPNVITYSTLINGLCRTGH----TIVALNLFEEMANGN--------------GKFGVVC 249
+PNV+TY++LIN LC G + + N+ E+ N N GK
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAE 348
Query: 250 K-----------PNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGF 298
K P+T+TY +I+G C +D+AK++F M K+ P++ TYN+LI+GF
Sbjct: 349 KLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408
Query: 299 CYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNT 358
C + L EM +G+ + VT+ I+ + G D A + + M+ V +
Sbjct: 409 CKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDI 468
Query: 359 STFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
T+S L+ G C G+++ A +F ++ + +F Y
Sbjct: 469 MTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIY 506
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 133/277 (48%), Gaps = 10/277 (3%)
Query: 101 RPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 160
R P ++NLL D +FK + S P++ TYN LIN FCK RV
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416
Query: 161 GFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLIN 220
G + + + + V +T++I+G A +F ++ + +++TYS L++
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476
Query: 221 GLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMK 280
GLC G AL +F+ + + N Y T+I+G+CK G V +A +LF +
Sbjct: 477 GLCSYGKLDTALVIFKYLQKSEMEL------NIFIYNTMIEGMCKAGKVGEAWDLFCSL- 529
Query: 281 DKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMD 340
+I PDVVTYN++I G C EA+ L +M + G P+ T+N ++ ++
Sbjct: 530 --SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRA 587
Query: 341 EASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHA 377
++ L++ M G + ST S L+ GR++ +
Sbjct: 588 ASAELIKEMRSSGFVGDASTIS-LVTNMLHDGRLDKS 623
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 129/255 (50%), Gaps = 11/255 (4%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+EA +F +M++ + P + ++N L K K + + LF+ ++ GL + TY
Sbjct: 380 DEAKQMFKFMVS-KDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT 438
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
+I F + G +V +++ + D + ++ L+ GLC+ ++ A +F L+
Sbjct: 439 IIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE 498
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
+ N+ Y+T+I G+C+ G A +LF ++ KP+ VTY T+I GLC +
Sbjct: 499 MELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---------IKPDVVTYNTMISGLCSKR 549
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
+ +A +LF +MK+ P+ TYN+LI D + L+ EM G D T +
Sbjct: 550 LLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS 609
Query: 328 VIMDELCKNGKMDEA 342
++ + L +G++D++
Sbjct: 610 LVTNML-HDGRLDKS 623
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 229 bits (583), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 191/344 (55%), Gaps = 42/344 (12%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
++A +F M+ RP P + FN L +AK +D V+SL +R+ + + DLY+YNI
Sbjct: 62 DDAVDLFGEMVQSRP-LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRI-------------- 193
LINCFC+ ++ VLG++++ + PD V +SL+ G C RI
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 194 ---------------------MEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVAL 232
EA AL ++ A GC+P++ TY T++NGLC+ G +AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 233 NLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYN 292
+L ++M G + + V YTTIID LC V+ A LF +M +K I P+VVTYN
Sbjct: 241 SLLKKMEKGK------IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 293 SLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILR 352
SLI C W++A+ LL +M+++ + P+VVTF+ ++D K GK+ EA +L + MI R
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 353 GVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
++P+ T+S+L++GFC+ R++ AK +F M S C V +Y
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 398
Score = 182 bits (463), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 157/287 (54%), Gaps = 6/287 (2%)
Query: 110 FNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 169
+ + L K+ + L+LF +++ G+ P++ TYN LI C C GR S +L ++
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 170 RSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTI 229
P+ V F++LI E +++EA L+ ++ P++ TYS+LING C
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 230 VALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVV 289
A ++FE M + + C PN VTY T+I G CK V++ ELF +M + + + V
Sbjct: 378 EAKHMFELMISKD------CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 290 TYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELM 349
TYN+LI G A D + A + +M+ GV PD++T+++++D LCK GK+++A + E +
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Query: 350 ILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
+ P+ T++ +++G C G+V +LF S+ G K V Y
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538
Score = 168 bits (426), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 156/301 (51%), Gaps = 7/301 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
N+A +F M N + P + ++N L CL + L + + P++ T++
Sbjct: 272 NDALNLFTEMDN-KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
LI+ F K G++ + +++ PD ++SLI G C R+ EA +F + +
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
C PNV+TY+TLI G C+ + LF EM+ G G NTVTY T+I GL + G
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ-RGLVG-----NTVTYNTLIQGLFQAG 444
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
D A+++F +M + PD++TY+ L+ G C +A + + ++PD+ T+N
Sbjct: 445 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 504
Query: 328 VIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESM 387
++++ +CK GK+++ L + L+GV PN ++T++ GFC G A LF M+
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564
Query: 388 G 388
G
Sbjct: 565 G 565
Score = 151 bits (382), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 147/291 (50%), Gaps = 12/291 (4%)
Query: 101 RPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC---KMGR 157
R P + +F+ L K L+ + + PD++TY+ LIN FC ++
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Query: 158 VSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYST 217
H F ++ I + CF P+ V + +LIKG C R+ E LF ++ G N +TY+T
Sbjct: 379 AKHMFELM--ISKDCF-PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 218 LINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFL 277
LI GL + G +A +F++M + GV P+ +TY+ ++DGLCK G ++KA +F
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSD----GV--PPDIITYSILLDGLCKYGKLEKALVVFE 489
Query: 278 QMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNG 337
++ + PD+ TYN +I G C A + L + +GV+P+V+ + ++ C+ G
Sbjct: 490 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 549
Query: 338 KMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMG 388
+EA L M G PN+ T++TL+ G + EL M S G
Sbjct: 550 LKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600
Score = 136 bits (342), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 139/278 (50%), Gaps = 7/278 (2%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA ++D M+ R P + +++ L D +F+ + S FP++ TYN L
Sbjct: 343 EAEKLYDEMIK-RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGC 208
I FCK RV G + + + + V + +LI+GL A +F K+ + G
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Query: 209 KPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGF 268
P++ITYS L++GLC+ G AL +FE + +P+ TY +I+G+CK G
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK------MEPDIYTYNIMIEGMCKAGK 515
Query: 269 VDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNV 328
V+ +LF + K + P+V+ Y ++I GFC EA+ L EM + G P+ T+N
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNT 575
Query: 329 IMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMD 366
++ ++G ++ L++ M G + ST S +++
Sbjct: 576 LIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 58/116 (50%)
Query: 269 VDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNV 328
+D A +LF +M P +V +N L+ N ++ L M + + D+ ++N+
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 329 IMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSM 384
+++ C+ ++ A +L M+ G P+ T S+L++G+C R++ A L M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 228 bits (582), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 128/367 (34%), Positives = 197/367 (53%), Gaps = 50/367 (13%)
Query: 73 RCKSSGQGDITAITPN--------EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYD 124
R SSG GD I N +A +F M+ RP P + FN L +AK K +D
Sbjct: 44 RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRP-LPSIVEFNKLLSAIAKMKKFD 102
Query: 125 TVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR-------------- 170
V+SL +++ + LYTYNILINCFC+ ++S +LG++++
Sbjct: 103 VVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 171 ---------------------SCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCK 209
+ PD + FT+LI GL ++ EA AL ++ GC+
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 210 PNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFV 269
PN++TY ++NGLC+ G T +ALNL +M + + V + TIID LCK V
Sbjct: 223 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK------IEADVVIFNTIIDSLCKYRHV 276
Query: 270 DKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVI 329
D A LF +M+ K I P+VVTY+SLI C W++A+ LL +M+++ + P++VTFN +
Sbjct: 277 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336
Query: 330 MDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGC 389
+D K GK EA +L + MI R ++P+ T+++L++GFC+ R++ AK++F M S C
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396
Query: 390 KHTVFSY 396
V +Y
Sbjct: 397 FPDVVTY 403
Score = 184 bits (466), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 155/287 (54%), Gaps = 6/287 (2%)
Query: 110 FNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 169
FN + L K +H D L+LFK + + G+ P++ TY+ LI+C C GR S +L ++
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 170 RSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTI 229
P+ V F +LI E + +EA L+ + P++ TY++L+NG C
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 230 VALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVV 289
A +FE M + + C P+ VTY T+I G CK V+ ELF +M + + D V
Sbjct: 383 KAKQMFEFMVSKD------CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 290 TYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELM 349
TY +LI G + D + A + +M+ GV PD++T+++++D LC NGK+++A + + M
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 350 ILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
+ + ++T+++G C G+V+ +LF S+ G K V +Y
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 543
Score = 149 bits (376), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 142/283 (50%), Gaps = 8/283 (2%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P L +FN L K + L+ + + PD++TYN L+N FC R+ +
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 165 LGRIL-RSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLC 223
++ + CF PD V + +LIKG C R+ + LF ++ G + +TY+TLI GL
Sbjct: 388 FEFMVSKDCF-PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 224 RTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKN 283
G A +F++M + P+ +TY+ ++DGLC G ++KA E+F M+
Sbjct: 447 HDGDCDNAQKVFKQMVSDG------VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 284 INPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEAS 343
I D+ Y ++I G C A ++ L + +GV+P+VVT+N ++ LC + EA
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 560
Query: 344 RLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMES 386
LL+ M G PN+ T++TL+ G + EL M S
Sbjct: 561 ALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Score = 139 bits (351), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 7/261 (2%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA ++D M+ R P + ++N L D +F+ + S FPD+ TYN L
Sbjct: 348 EAEKLYDDMIK-RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL 406
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGC 208
I FCK RV G + + D V +T+LI+GL + A +F ++ + G
Sbjct: 407 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466
Query: 209 KPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGF 268
P+++TYS L++GLC G AL +F+ M K + YTT+I+G+CK G
Sbjct: 467 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI------YIYTTMIEGMCKAGK 520
Query: 269 VDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNV 328
VD +LF + K + P+VVTYN++I G C EA LL +M + G P+ T+N
Sbjct: 521 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNT 580
Query: 329 IMDELCKNGKMDEASRLLELM 349
++ ++G ++ L+ M
Sbjct: 581 LIRAHLRDGDKAASAELIREM 601
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 228 bits (582), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 127/369 (34%), Positives = 198/369 (53%), Gaps = 51/369 (13%)
Query: 72 ERCKSSGQGDITAITPN---------EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKH 122
ER +S GD I N +A +F M+ RP P + FN L +AK
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPS-IVEFNKLLSAVAKMNK 98
Query: 123 YDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTS 182
++ V+SL +++ + G+ DLYTY+I INCFC+ ++S VL ++++ + PD V +S
Sbjct: 99 FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS 158
Query: 183 LIKGLCAESRI-----------------------------------MEAAALFTKLKAFG 207
L+ G C RI EA AL ++ G
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
C+P+++TY T++NGLC+ G +AL+L ++M G + + V Y TIIDGLCK
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGK------IEADVVIYNTIIDGLCKYK 272
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
+D A LF +M +K I PDV TY+SLI C W++A+ LL +M+++ + P+VVTF+
Sbjct: 273 HMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFS 332
Query: 328 VIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESM 387
++D K GK+ EA +L + MI R ++P+ T+S+L++GFC+ R++ AK +F M S
Sbjct: 333 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 392
Query: 388 GCKHTVFSY 396
C V +Y
Sbjct: 393 DCFPNVVTY 401
Score = 198 bits (504), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 163/287 (56%), Gaps = 6/287 (2%)
Query: 110 FNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 169
+N + L K KH D L+LF +++ G+ PD++TY+ LI+C C GR S +L ++
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 170 RSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTI 229
P+ V F++LI E +++EA L+ ++ P++ TYS+LING C
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 230 VALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVV 289
A ++FE M + + C PN VTY+T+I G CK V++ ELF +M + + + V
Sbjct: 381 EAKHMFELMISKD------CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 290 TYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELM 349
TY +LIHGF A D + A + +M+ GV P+++T+N+++D LCKNGK+ +A + E +
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Query: 350 ILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
+ P+ T++ +++G C G+V ELF ++ G V +Y
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541
Score = 138 bits (347), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 145/289 (50%), Gaps = 8/289 (2%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA ++D M+ R P + +++ L D +F+ + S FP++ TY+ L
Sbjct: 346 EAEKLYDEMIK-RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTL 404
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGC 208
I FCK RV G + + + + V +T+LI G A +F ++ + G
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Query: 209 KPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGF 268
PN++TY+ L++GLC+ G A+ +FE + +P+ TY +I+G+CK G
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS------TMEPDIYTYNIMIEGMCKAGK 518
Query: 269 VDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNV 328
V+ ELF + K ++P+V+ YN++I GFC EA+ LL +M + G P+ T+N
Sbjct: 519 VEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNT 578
Query: 329 IMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHA 377
++ ++G + ++ L++ M G + ST L+ GR++ +
Sbjct: 579 LIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKS 626
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 228 bits (582), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 119/344 (34%), Positives = 191/344 (55%), Gaps = 42/344 (12%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+EA +F M+ RP P + F+ L +AK K +D V+S +++ G+ +LYTYNI
Sbjct: 47 DEAVDLFGEMVKSRPFPS-IVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 148 LINCFCKMGRVSHGFVVLGRILR-----------------------------------SC 172
+INC C+ ++S +LG++++
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 173 FTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVAL 232
+ PD V FT+L+ GL ++ EA AL ++ GC+P+++TY +INGLC+ G +AL
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 233 NLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYN 292
NL +M G + + V Y+T+ID LCK VD A LF +M +K I PDV TY+
Sbjct: 226 NLLNKMEKGK------IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279
Query: 293 SLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILR 352
SLI C W++A+ LL +M+++ + P+VVTFN ++D K GK+ EA +L + MI R
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Query: 353 GVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
++PN T+++L++GFC+ R++ A+++F M S C V +Y
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 383
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 159/287 (55%), Gaps = 6/287 (2%)
Query: 110 FNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 169
++ + L K +H D L+LF +++ G+ PD++TY+ LI+C C GR S +L +L
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 170 RSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTI 229
P+ V F SLI E +++EA LF ++ PN++TY++LING C
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 230 VALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVV 289
A +F M + + C P+ VTY T+I+G CK V ELF M + + + V
Sbjct: 363 EAQQIFTLMVSKD------CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 290 TYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELM 349
TY +LIHGF A+D + A + +M+ GV P+++T+N ++D LCKNGK+++A + E +
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Query: 350 ILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
+ P+ T++ + +G C G+V +LF S+ G K V +Y
Sbjct: 477 QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAY 523
Score = 142 bits (357), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 137/278 (49%), Gaps = 7/278 (2%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA +FD M+ R P + ++N L D +F + S PD+ TYN L
Sbjct: 328 EAEKLFDEMIQ-RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGC 208
IN FCK +V G + + R + V +T+LI G S A +F ++ + G
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446
Query: 209 KPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGF 268
PN++TY+TL++GLC+ G A+ +FE + +P+ TY + +G+CK G
Sbjct: 447 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK------MEPDIYTYNIMSEGMCKAGK 500
Query: 269 VDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNV 328
V+ +LF + K + PDV+ YN++I GFC EA L I+M + G PD T+N
Sbjct: 501 VEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNT 560
Query: 329 IMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMD 366
++ ++G ++ L++ M + ST+ + D
Sbjct: 561 LIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 598
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 225 bits (574), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 122/359 (33%), Positives = 198/359 (55%), Gaps = 43/359 (11%)
Query: 73 RCKSSGQGDITAITPNEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKR 132
R K S G ++ + ++A +F M+ RP P + F+ L +AK +D V+SL ++
Sbjct: 49 REKLSRNG-LSELKLDDAVALFGEMVKSRPFPS-IIEFSKLLSAIAKMNKFDVVISLGEQ 106
Query: 133 LNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESR 192
+ + G+ + YTY+ILINCFC+ ++ VLG++++ + P+ V +SL+ G C R
Sbjct: 107 MQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 166
Query: 193 IMEAA-----------------------------------ALFTKLKAFGCKPNVITYST 217
I EA AL ++ A GC+P+++TY
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 226
Query: 218 LINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFL 277
++NGLC+ G T +A NL +M G +P + Y TIIDGLCK +D A LF
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGK------LEPGVLIYNTIIDGLCKYKHMDDALNLFK 280
Query: 278 QMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNG 337
+M+ K I P+VVTY+SLI C W++A+ LL +M+++ + PDV TF+ ++D K G
Sbjct: 281 EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340
Query: 338 KMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
K+ EA +L + M+ R ++P+ T+S+L++GFC+ R++ AK++F M S C V +Y
Sbjct: 341 KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 399
Score = 191 bits (486), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 166/307 (54%), Gaps = 7/307 (2%)
Query: 90 AFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILI 149
AF + + M + P L +N + L K KH D L+LFK + + G+ P++ TY+ LI
Sbjct: 240 AFNLLNKMEQGKLEPGVLI-YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCK 209
+C C GR S +L ++ PD F++LI E +++EA L+ ++
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 210 PNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFV 269
P+++TYS+LING C A +FE M + + C P+ VTY T+I G CK V
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH------CFPDVVTYNTLIKGFCKYKRV 412
Query: 270 DKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVI 329
++ E+F +M + + + VTYN LI G A D + A + EM+ GV P+++T+N +
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472
Query: 330 MDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGC 389
+D LCKNGK+++A + E + + P T++ +++G C G+V +LF ++ G
Sbjct: 473 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 532
Query: 390 KHTVFSY 396
K V +Y
Sbjct: 533 KPDVVAY 539
Score = 149 bits (375), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 140/289 (48%), Gaps = 8/289 (2%)
Query: 101 RPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 160
R P + +F+ L K L+ + + P + TY+ LIN FC R+
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 161 GFVVLGRIL-RSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLI 219
+ ++ + CF PD V + +LIKG C R+ E +F ++ G N +TY+ LI
Sbjct: 380 AKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 220 NGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQM 279
GL + G +A +F+EM + PN +TY T++DGLCK G ++KA +F +
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDG------VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 280 KDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKM 339
+ + P + TYN +I G C A + L + +GV+PDVV +N ++ C+ G
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 340 DEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMG 388
+EA L + M G PN+ ++TL+ G + EL M S G
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 142/289 (49%), Gaps = 8/289 (2%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA ++D M+ R P + +++ L D +F+ + S FPD+ TYN L
Sbjct: 344 EAEKLYDEMVK-RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 402
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGC 208
I FCK RV G V + + + V + LI+GL A +F ++ + G
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 209 KPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGF 268
PN++TY+TL++GLC+ G A+ +FE + +P TY +I+G+CK G
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK------MEPTIYTYNIMIEGMCKAGK 516
Query: 269 VDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNV 328
V+ +LF + K + PDVV YN++I GFC EA+ L EM + G P+ +N
Sbjct: 517 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNT 576
Query: 329 IMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHA 377
++ ++G + ++ L++ M G + ST L+ GR++ +
Sbjct: 577 LIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKS 624
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 6/169 (3%)
Query: 104 PPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 163
PP + ++N L L K + + +F+ L + + P +YTYNI+I CK G+V G+
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 164 VLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLC 223
+ + PD VA+ ++I G C + EA ALF ++K G PN Y+TLI
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 582
Query: 224 RTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTT--IIDGLCKEGFVD 270
R G + L +EM + G +T+ T + DG + F+D
Sbjct: 583 RDGDREASAELIKEMRS----CGFAGDASTIGLVTNMLHDGRLDKSFLD 627
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 221 bits (563), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 119/344 (34%), Positives = 190/344 (55%), Gaps = 42/344 (12%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
++A +F M+ RP P + F+ L +AK +D V+SL +++ + G+ +LYTY+I
Sbjct: 63 DDAVNLFGDMVKSRPFPS-IVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIM------------- 194
LINCFC+ ++S VL ++++ + PD V SL+ G C +RI
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 195 ----------------------EAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVAL 232
EA AL ++ GC+P+++TY ++NGLC+ G +AL
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 233 NLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYN 292
+L ++M G +P V Y TIID LC V+ A LF +M +K I P+VVTYN
Sbjct: 242 SLLKKMEQGK------IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 295
Query: 293 SLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILR 352
SLI C W++A+ LL +M+++ + P+VVTF+ ++D K GK+ EA +L + MI R
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Query: 353 GVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
++P+ T+S+L++GFC+ R++ AK +F M S C V +Y
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 399
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 161/292 (55%), Gaps = 6/292 (2%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P + +N + L K+ + L+LF +++ G+ P++ TYN LI C C GR S +
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 165 LGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCR 224
L ++ P+ V F++LI E +++EA L+ ++ P++ TYS+LING C
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373
Query: 225 TGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNI 284
A ++FE M + + C PN VTY T+I G CK VD+ ELF +M + +
Sbjct: 374 HDRLDEAKHMFELMISKD------CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427
Query: 285 NPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASR 344
+ VTY +LIHGF A + + A + +M+ GV PD++T+++++D LC NGK++ A
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALV 487
Query: 345 LLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
+ E + + P+ T++ +++G C G+V +LF S+ G K V +Y
Sbjct: 488 VFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTY 539
Score = 166 bits (420), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 154/301 (51%), Gaps = 7/301 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
N+A +F M N + P + ++N L CL + L + + P++ T++
Sbjct: 273 NDALNLFTEMDN-KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
LI+ F K G++ + +++ PD ++SLI G C R+ EA +F + +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
C PNV+TY+TLI G C+ + LF EM+ G G NTVTYTT+I G +
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ-RGLVG-----NTVTYTTLIHGFFQAR 445
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
D A+ +F QM + PD++TY+ L+ G C A + + ++PD+ T+N
Sbjct: 446 ECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYN 505
Query: 328 VIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESM 387
++++ +CK GK+++ L + L+GV PN T++T+M GFC G A LF M+
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
Query: 388 G 388
G
Sbjct: 566 G 566
Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 131/255 (51%), Gaps = 8/255 (3%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+EA +F+ M++ + P + ++N L K K D + LF+ ++ GL + TY
Sbjct: 378 DEAKHMFELMIS-KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
LI+ F + + +V +++ PD + ++ L+ GLC ++ A +F L+
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
+P++ TY+ +I G+C+ G +LF ++ GV KPN VTYTT++ G C++G
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK----GV--KPNVVTYTTMMSGFCRKG 550
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
++A LF +MK++ PD TYN+LI D + L+ EM D T
Sbjct: 551 LKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG 610
Query: 328 VIMDELCKNGKMDEA 342
++ + L +G++D++
Sbjct: 611 LVTNML-HDGRLDKS 624
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 108/205 (52%), Gaps = 6/205 (2%)
Query: 192 RIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKP 251
++ +A LF + P+++ +S L++ + + + ++L E+M N G+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN----LGI--SH 114
Query: 252 NTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLL 311
N TY+ +I+ C+ + A + +M PD+VT NSL++GFC+ N ++A L+
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 312 IEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLT 371
+M++ G QPD TFN ++ L ++ + EA L++ M+++G P+ T+ +++G C
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234
Query: 372 GRVNHAKELFVSMESMGCKHTVFSY 396
G ++ A L ME + V Y
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIY 259
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 216 bits (551), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 182/328 (55%), Gaps = 42/328 (12%)
Query: 97 MLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 156
M+ RP P + FN L +AK K +D V+SL +++ G+ +LYTYNILINCFC+
Sbjct: 1 MVKSRP-LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRS 59
Query: 157 RVSHGFVVLGRILR-----------------------------------SCFTPDAVAFT 181
++S +LG++++ + PD + FT
Sbjct: 60 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119
Query: 182 SLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANG 241
+LI GL ++ EA AL ++ GC+PN++TY ++NGLC+ G +A NL +M
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Query: 242 NGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYA 301
+ + V + TIID LCK VD A LF +M+ K I P+VVTY+SLI C
Sbjct: 180 K------IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 233
Query: 302 NDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTF 361
W++A+ LL +M+++ + P++VTFN ++D K GK EA +L + MI R ++P+ T+
Sbjct: 234 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 293
Query: 362 STLMDGFCLTGRVNHAKELFVSMESMGC 389
++L++GFC+ R++ AK++F M S C
Sbjct: 294 NSLINGFCMHDRLDKAKQMFEFMVSKDC 321
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 153/287 (53%), Gaps = 6/287 (2%)
Query: 110 FNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 169
FN + L K +H D L+LFK + + G+ P++ TY+ LI+C C GR S +L ++
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 170 RSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTI 229
P+ V F +LI E + +EA L + P++ TY++LING C
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 230 VALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVV 289
A +FE M + + C P+ TY T+I G CK V+ ELF +M + + D V
Sbjct: 308 KAKQMFEFMVSKD------CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361
Query: 290 TYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELM 349
TY +LI G + D + A + +M+ GV PD++T+++++D LC NGK+++A + + M
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 350 ILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
+ + ++T+++G C G+V+ +LF S+ G K V +Y
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 468
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 142/283 (50%), Gaps = 8/283 (2%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P L +FN L K + L + + PD++TYN LIN FC R+ +
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 165 LGRIL-RSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLC 223
++ + CF PD + +LIKG C R+ + LF ++ G + +TY+TLI GL
Sbjct: 313 FEFMVSKDCF-PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 224 RTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKN 283
G A +F++M + GV P+ +TY+ ++DGLC G ++KA E+F M+
Sbjct: 372 HDGDCDNAQKVFKQMVSD----GV--PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 284 INPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEAS 343
I D+ Y ++I G C A ++ L + +GV+P+VVT+N ++ LC + EA
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 485
Query: 344 RLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMES 386
LL+ M G P++ T++TL+ G + EL M S
Sbjct: 486 ALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 130/261 (49%), Gaps = 7/261 (2%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA + D M+ R P + ++N L D +F+ + S FPDL TYN L
Sbjct: 273 EAEKLHDDMIK-RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTL 331
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGC 208
I FCK RV G + + D V +T+LI+GL + A +F ++ + G
Sbjct: 332 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 391
Query: 209 KPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGF 268
P+++TYS L++GLC G AL +F+ M K + YTT+I+G+CK G
Sbjct: 392 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI------YIYTTMIEGMCKAGK 445
Query: 269 VDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNV 328
VD +LF + K + P+VVTYN++I G C EA LL +M + G PD T+N
Sbjct: 446 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNT 505
Query: 329 IMDELCKNGKMDEASRLLELM 349
++ ++G ++ L+ M
Sbjct: 506 LIRAHLRDGDKAASAELIREM 526
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 216 bits (550), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/350 (33%), Positives = 191/350 (54%), Gaps = 42/350 (12%)
Query: 82 ITAITPNEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPD 141
++ I ++A +F M RP P + F+ L +AK +D V+S +++ G+ +
Sbjct: 54 LSDIELDDAIGLFGVMAQSRPFPS-IIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHN 112
Query: 142 LYTYNILINCFC----------------KMG-------------------RVSHGFVVLG 166
LYTYNILINCFC K+G R+S ++
Sbjct: 113 LYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVD 172
Query: 167 RILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTG 226
+++ + PD V FT+LI GL ++ EA AL ++ GC+P+++TY ++NGLC+ G
Sbjct: 173 QMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRG 232
Query: 227 HTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINP 286
T +ALNL +M + N V Y+T+ID LCK D A LF +M++K + P
Sbjct: 233 DTDLALNLLNKMEAAK------IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 286
Query: 287 DVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLL 346
+V+TY+SLI C W++A+ LL +M+++ + P++VTF+ ++D K GK+ +A +L
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346
Query: 347 ELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
E MI R ++PN T+S+L++GFC+ R+ AK++ M C V +Y
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTY 396
Score = 179 bits (454), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 151/274 (55%), Gaps = 6/274 (2%)
Query: 110 FNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 169
++ + L K +H D L+LF + + G+ P++ TY+ LI+C C GR S +L ++
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 170 RSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTI 229
P+ V F++LI + ++++A L+ ++ PN+ TYS+LING C
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 230 VALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVV 289
A + E M + C PN VTY T+I+G CK VDK ELF +M + + + V
Sbjct: 376 EAKQMLELMIRKD------CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV 429
Query: 290 TYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELM 349
TY +LIHGF A D + A + +M+ GV P+++T+N+++D LCKNGK+ +A + E +
Sbjct: 430 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 489
Query: 350 ILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVS 383
+ P+ T++ +++G C G+ FV+
Sbjct: 490 QRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYFVA 523
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 162/344 (47%), Gaps = 42/344 (12%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
++A + D M+ M P +T L+ G K + V +L R+ G PDL TY
Sbjct: 165 SDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV-ALIDRMVQRGCQPDLVTYGA 223
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
++N CK G +L ++ + + V ++++I LC +A LFT+++ G
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283
Query: 208 CKPNVITYSTLINGLC-----------------------------------RTGHTIVAL 232
+PNVITYS+LI+ LC + G + A
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343
Query: 233 NLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYN 292
L+EEM + PN TY+++I+G C + +AK++ M K+ P+VVTYN
Sbjct: 344 KLYEEMIKRS------IDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYN 397
Query: 293 SLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILR 352
+LI+GFC A ++ L EM +G+ + VT+ ++ + D A + + M+
Sbjct: 398 TLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV 457
Query: 353 GVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
GV+PN T++ L+DG C G++ A +F ++ + +++Y
Sbjct: 458 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 501
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 6/204 (2%)
Query: 101 RPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 160
R P L +F+ L K L++ + + P+++TY+ LIN FC + R+
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 161 GFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLIN 220
+L ++R P+ V + +LI G C R+ + LF ++ G N +TY+TLI+
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436
Query: 221 GLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMK 280
G + A +F++M + V PN +TY ++DGLCK G + KA +F ++
Sbjct: 437 GFFQARDCDNAQMVFKQMVS------VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 490
Query: 281 DKNINPDVVTYNSLIHGFCYANDW 304
+ PD+ TYN +I G C A W
Sbjct: 491 RSTMEPDIYTYNIMIEGMCKAGKW 514
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+ A +F M+++ P LT +N+L L K + +F+ L + + PD+YTYNI
Sbjct: 445 DNAQMVFKQMVSVGVHPNILT-YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 503
Query: 148 LINCFCKMGRVSHG 161
+I CK G+ G
Sbjct: 504 MIEGMCKAGKWKMG 517
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 215 bits (547), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 119/356 (33%), Positives = 191/356 (53%), Gaps = 33/356 (9%)
Query: 70 LKERCKSSGQGDITAITPNEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSL 129
L+ER + DI N+A +F M+ RP P + FN L + K K YD V+SL
Sbjct: 52 LRERLSKTRLRDIKL---NDAIDLFSDMVKSRPFPS-IVDFNRLLSAIVKLKKYDVVISL 107
Query: 130 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCA 189
K++ G+ DLYT+NI+INCFC +VS +LG++L+ + PD V SL+ G C
Sbjct: 108 GKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR 167
Query: 190 ESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVV- 248
+R+ +A +L K+ G KP+++ Y+ +I+ LC+T A + F+E+ + VV
Sbjct: 168 RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT 227
Query: 249 ----------------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLQMK 280
PN +TY+ ++D K G V +AKELF +M
Sbjct: 228 YTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287
Query: 281 DKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMD 340
+I+PD+VTY+SLI+G C + +EAN + M+ +G DVV++N +++ CK +++
Sbjct: 288 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347
Query: 341 EASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
+ +L M RG+ NT T++TL+ GF G V+ A+E F M+ G +++Y
Sbjct: 348 DGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTY 403
Score = 176 bits (447), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 167/336 (49%), Gaps = 42/336 (12%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
++A + D M+ + P + ++N + L KTK + FK + G+ P++ TY
Sbjct: 172 SDAVSLVDKMVEI-GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 230
Query: 148 LINCFCKMGRVSHG-------------------------FVVLGRIL----------RSC 172
L+N C R S FV G++L R
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 290
Query: 173 FTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVAL 232
PD V ++SLI GLC RI EA +F + + GC +V++Y+TLING C+ +
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350
Query: 233 NLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYN 292
LF EM+ + G+V NTVTY T+I G + G VDKA+E F QM I+PD+ TYN
Sbjct: 351 KLFREMS----QRGLV--SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404
Query: 293 SLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILR 352
L+ G C + +A + +M + + D+VT+ ++ +CK GK++EA L + L+
Sbjct: 405 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464
Query: 353 GVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMG 388
G+ P+ T++T+M G C G ++ + L+ M+ G
Sbjct: 465 GLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 208 bits (529), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 107/309 (34%), Positives = 176/309 (56%), Gaps = 7/309 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
NEA +F +M+ RP P + F L +AK K +D V++L L G+ DLYT N+
Sbjct: 54 NEALDLFTHMVESRPLPS-IIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
L+NCFC+ + LG++++ F PD V FTSLI G C +R+ EA ++ ++ G
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
KP+V+ Y+T+I+ LC+ GH AL+LF++M N +G+ +P+ V YT++++GLC G
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMEN----YGI--RPDVVMYTSLVNGLCNSG 226
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
A L M + I PDV+T+N+LI F + +A L EM+ + P++ T+
Sbjct: 227 RWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYT 286
Query: 328 VIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESM 387
+++ C G +DEA ++ LM +G P+ +++L++GFC +V+ A ++F M
Sbjct: 287 SLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK 346
Query: 388 GCKHTVFSY 396
G +Y
Sbjct: 347 GLTGNTITY 355
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 165/312 (52%), Gaps = 10/312 (3%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
N A +FD M N P + +L+ G L + + SL + + + PD+ T+N
Sbjct: 194 NYALSLFDQMENYGIRPDVVMYTSLVNG-LCNSGRWRDADSLLRGMTKRKIKPDVITFNA 252
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
LI+ F K G+ + ++R P+ +TSLI G C E + EA +F ++ G
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG 312
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
C P+V+ Y++LING C+ A+ +F EM+ G G NT+TYTT+I G + G
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ-KGLTG-----NTITYTTLIQGFGQVG 366
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQ---GVQPDVV 324
+ A+E+F M + + P++ TYN L+H CY +A + +M + GV P++
Sbjct: 367 KPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIW 426
Query: 325 TFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSM 384
T+NV++ LC NGK+++A + E M R ++ T++ ++ G C G+V +A LF S+
Sbjct: 427 TYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSL 486
Query: 385 ESMGCKHTVFSY 396
S G K V +Y
Sbjct: 487 PSKGVKPNVVTY 498
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 4/163 (2%)
Query: 79 QGDITAITPNEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNST-- 136
QG PN A +F +M++ R PP + ++N+L CL L +F+ +
Sbjct: 360 QGFGQVGKPNVAQEVFSHMVS-RGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418
Query: 137 -GLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIME 195
G+ P+++TYN+L++ C G++ +V + + + +T +I+G+C ++
Sbjct: 419 DGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKN 478
Query: 196 AAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEM 238
A LF L + G KPNV+TY+T+I+GL R G A LF +M
Sbjct: 479 AVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 33.9 bits (76), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/106 (20%), Positives = 49/106 (46%)
Query: 291 YNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMI 350
Y ++ ++ +NEA L M++ P ++ F +++ + K K D L + +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 351 LRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
+ GV+ + T + LM+ FC + + A M +G + + ++
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTF 145
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 207 bits (528), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 184/314 (58%), Gaps = 7/314 (2%)
Query: 83 TAITPNEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDL 142
+++ E +F M+ RP P + F+ + +AK+K+YD V+SLF + G+ DL
Sbjct: 46 SSMNLEEEIDLFCKMIQSRP-LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDL 104
Query: 143 YTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTK 202
Y+YNI+INC C+ R V+G++++ + PD V +SLI G C +R+ +A L +K
Sbjct: 105 YSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK 164
Query: 203 LKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDG 262
++ G +P+V+ Y+T+I+G C+ G A+ LF+ M + GV + + VTY +++ G
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRME----RDGV--RADAVTYNSLVAG 218
Query: 263 LCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPD 322
LC G A L M ++I P+V+T+ ++I F ++EA L EM + V PD
Sbjct: 219 LCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 278
Query: 323 VVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFV 382
V T+N +++ LC +G++DEA ++L+LM+ +G P+ T++TL++GFC + RV+ +LF
Sbjct: 279 VFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFR 338
Query: 383 SMESMGCKHTVFSY 396
M G +Y
Sbjct: 339 EMAQRGLVGDTITY 352
Score = 155 bits (391), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 152/301 (50%), Gaps = 10/301 (3%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
N+A +FD M +T +N L L + + L + + + P++ T+
Sbjct: 191 NDAVELFDRMERDGVRADAVT-YNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
+I+ F K G+ S + + R C PD + SLI GLC R+ EA + + G
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
C P+V+TY+TLING C++ LF EMA G G +T+TY TII G + G
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ-RGLVG-----DTITYNTIIQGYFQAG 363
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
D A+E+F +M + P++ TY+ L++G C +A L M ++ D+ T+N
Sbjct: 364 RPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN 420
Query: 328 VIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESM 387
+++ +CK G +++A L + +G+ P+ +++T++ GFC + + + L+ M+
Sbjct: 421 IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQED 480
Query: 388 G 388
G
Sbjct: 481 G 481
Score = 135 bits (340), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 124/257 (48%), Gaps = 9/257 (3%)
Query: 100 MRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS 159
MR P + +F + K + + L++ + + PD++TYN LIN C GRV
Sbjct: 237 MRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVD 296
Query: 160 HGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLI 219
+L ++ PD V + +LI G C R+ E LF ++ G + ITY+T+I
Sbjct: 297 EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII 356
Query: 220 NGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQM 279
G + G A +F M + +PN TY+ ++ GLC V+KA LF M
Sbjct: 357 QGYFQAGRPDAAQEIFSRMDS---------RPNIRTYSILLYGLCMNWRVEKALVLFENM 407
Query: 280 KDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKM 339
+ I D+ TYN +IHG C + +A L + +G++PDVV++ ++ C+ +
Sbjct: 408 QKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQW 467
Query: 340 DEASRLLELMILRGVNP 356
D++ L M G+ P
Sbjct: 468 DKSDLLYRKMQEDGLLP 484
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 206 bits (524), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/315 (35%), Positives = 173/315 (54%), Gaps = 22/315 (6%)
Query: 87 PNEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYN 146
P+ A ++ M +R P + SFN+L C LS F +L G PD+ T+N
Sbjct: 122 PDVAISLYRKM-EIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFN 180
Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCF---------------TPDAVAFTSLIKGLCAES 191
L++ C R+S + G ++ + F TP + F +LI GLC E
Sbjct: 181 TLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEG 240
Query: 192 RIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKP 251
R++EAAAL K+ G +V+TY T++NG+C+ G T ALNL +M + KP
Sbjct: 241 RVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH------IKP 294
Query: 252 NTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLL 311
+ V Y+ IID LCK+G A+ LF +M +K I P+V TYN +I GFC W++A LL
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Query: 312 IEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLT 371
+M+++ + PDV+TFN ++ K GK+ EA +L + M+ R + P+T T+++++ GFC
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 414
Query: 372 GRVNHAKELFVSMES 386
R + AK +F M S
Sbjct: 415 NRFDDAKHMFDLMAS 429
Score = 161 bits (408), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 154/292 (52%), Gaps = 10/292 (3%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P + ++ + L K H+ LF + G+ P+++TYN +I+ FC GR S +
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 165 LGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCR 224
L ++ PD + F +LI E ++ EA L ++ P+ +TY+++I G C+
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 225 TGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNI 284
A ++F+ MA+ P+ VT+ TIID C+ VD+ +L ++ + +
Sbjct: 414 HNRFDDAKHMFDLMAS----------PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 285 NPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASR 344
+ TYN+LIHGFC ++ N A L EM+ GV PD +T N+++ C+N K++EA
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 345 LLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
L E++ + ++ +T ++ ++ G C +V+ A +LF S+ G + V +Y
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTY 575
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 141/298 (47%), Gaps = 16/298 (5%)
Query: 101 RPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR--- 157
R P + +FN L K L + +FPD TYN +I FCK R
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 158 VSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYST 217
H F ++ +PD V F ++I C R+ E L ++ G N TY+T
Sbjct: 420 AKHMFDLMA-------SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472
Query: 218 LINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFL 277
LI+G C + A +LF+EM + VC P+T+T ++ G C+ +++A ELF
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHG-----VC-PDTITCNILLYGFCENEKLEEALELFE 526
Query: 278 QMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNG 337
++ I+ D V YN +IHG C + +EA L + GV+PDV T+NV++ C
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKS 586
Query: 338 KMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFS 395
+ +A+ L M G P+ ST++TL+ G G ++ + EL M S G F+
Sbjct: 587 AISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 135/278 (48%), Gaps = 11/278 (3%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA + D ML+ P +T ++++G K +D +F + S PD+ T+N +
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYG-FCKHNRFDDAKHMFDLMAS----PDVVTFNTI 438
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGC 208
I+ +C+ RV G +L I R + + +LI G C + A LF ++ + G
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Query: 209 KPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGF 268
P+ IT + L+ G C AL LFE + +TV Y II G+CK
Sbjct: 499 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDL------DTVAYNIIIHGMCKGSK 552
Query: 269 VDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNV 328
VD+A +LF + + PDV TYN +I GFC + ++AN L +M D G +PD T+N
Sbjct: 553 VDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNT 612
Query: 329 IMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMD 366
++ K G++D++ L+ M G + + T + D
Sbjct: 613 LIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650
Score = 115 bits (287), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 135/309 (43%), Gaps = 62/309 (20%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
++A FDYM+ RP + N + G + D +SL++++ + ++Y++NI
Sbjct: 88 DDAIDFFDYMVRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
LI CFC ++S + F KL G
Sbjct: 147 LIKCFCDCHKLSFSL-----------------------------------STFGKLTKLG 171
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
+P+V+T++TL++GLC AL LF M + G
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMV-------------------------ETG 206
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
F++ A LF QM + + P V+T+N+LI+G C EA L+ +M+ +G+ DVVT+
Sbjct: 207 FLE-AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 328 VIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESM 387
I++ +CK G A LL M + P+ +S ++D C G + A+ LF M
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 388 GCKHTVFSY 396
G VF+Y
Sbjct: 326 GIAPNVFTY 334
Score = 38.5 bits (88), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 52/120 (43%)
Query: 269 VDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNV 328
+D A + F M V N +I F N + A L +M + + ++ +FN+
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 329 IMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMG 388
++ C K+ + + G P+ TF+TL+ G CL R++ A LF M G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 202 bits (515), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/345 (32%), Positives = 180/345 (52%), Gaps = 43/345 (12%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
++A +F M+ RP P + F+ L +AK +D V+SL +++ + G+ +LYTY+I
Sbjct: 57 DDAIGLFGDMVKSRPFPS-IVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 148 LINCFCKMGRVSHGFVVLGRILR-----------------------------------SC 172
IN FC+ ++S +LG++++
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 173 FTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVAL 232
+ PD V FT+L+ GL ++ EA AL ++ GC+P+++TY +INGLC+ G +AL
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 233 NLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYN 292
NL +M G + + V Y TIIDGLCK +D A +LF +M+ K I PDV TYN
Sbjct: 236 NLLNKMEKGK------IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 289
Query: 293 SLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMIL- 351
LI C W++A+ LL +M+++ + PD+V FN ++D K GK+ EA +L + M+
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS 349
Query: 352 RGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
+ P+ ++TL+ GFC RV E+F M G +Y
Sbjct: 350 KHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 394
Score = 182 bits (463), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/280 (35%), Positives = 155/280 (55%), Gaps = 7/280 (2%)
Query: 110 FNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 169
+N + L K KH D LF ++ + G+ PD++TYN LI+C C GR S +L +L
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 170 RSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKL-KAFGCKPNVITYSTLINGLCRTGHT 228
PD V F +LI E +++EA L+ ++ K+ C P+V+ Y+TLI G C+
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 229 IVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDV 288
+ +F EM+ + G+V NTVTYTT+I G + D A+ +F QM ++PD+
Sbjct: 373 EEGMEVFREMS----QRGLV--GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDI 426
Query: 289 VTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLEL 348
+TYN L+ G C + A + M + ++ D+VT+ +++ LCK GK+++ L
Sbjct: 427 MTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCS 486
Query: 349 MILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMG 388
+ L+GV PN T++T+M GFC G A LFV M+ G
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526
Score = 172 bits (437), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 163/339 (48%), Gaps = 31/339 (9%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+EA + D M+ M P +T L+ G K + V +L +R+ G PDL TY
Sbjct: 162 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV-ALVERMVVKGCQPDLVTYGA 220
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
+IN CK G +L ++ + D V + ++I GLC + +A LF K++ G
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVV------------------- 248
KP+V TY+ LI+ LC G A L +M N +V
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340
Query: 249 -----------CKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHG 297
C P+ V Y T+I G CK V++ E+F +M + + + VTY +LIHG
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400
Query: 298 FCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPN 357
F A D + A + +M+ GV PD++T+N+++D LC NG ++ A + E M R + +
Sbjct: 401 FFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLD 460
Query: 358 TSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
T++T+++ C G+V +LF S+ G K V +Y
Sbjct: 461 IVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTY 499
Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 110/215 (51%), Gaps = 6/215 (2%)
Query: 182 SLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANG 241
+L + + + ++ +A LF + P+++ +S L++ + + + ++L E+M N
Sbjct: 45 NLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN- 103
Query: 242 NGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYA 301
G+ N TY+ I+ C+ + A + +M P +VT NSL++GFC+
Sbjct: 104 ---LGI--SHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHG 158
Query: 302 NDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTF 361
N +EA L+ +M++ G QPD VTF ++ L ++ K EA L+E M+++G P+ T+
Sbjct: 159 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 218
Query: 362 STLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
+++G C G + A L ME + V Y
Sbjct: 219 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 253
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 202 bits (513), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 178/317 (56%), Gaps = 7/317 (2%)
Query: 80 GDITAITPNEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLF 139
G + +I +AF +F M++ +P P + F L A + Y+TV+ +++ G+
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQP-LPSIVDFTRLLTATANLRRYETVIYFSQKMELYGIS 103
Query: 140 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAAL 199
DLY++ ILI+CFC+ R+S VLG++++ + P V F SL+ G C +RI +A +L
Sbjct: 104 HDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSL 163
Query: 200 FTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTI 259
+ G +PNV+ Y+TLI+GLC+ G +AL L EM K G+ + VTY T+
Sbjct: 164 VILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEME----KKGL--GADVVTYNTL 217
Query: 260 IDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGV 319
+ GLC G A + M ++INPDVVT+ +LI F + +EA L EM+ V
Sbjct: 218 LTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV 277
Query: 320 QPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKE 379
P+ VT+N I++ LC +G++ +A + +LM +G PN T++TL+ GFC V+ +
Sbjct: 278 DPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMK 337
Query: 380 LFVSMESMGCKHTVFSY 396
LF M G +F+Y
Sbjct: 338 LFQRMSCEGFNADIFTY 354
Score = 155 bits (391), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 140/292 (47%), Gaps = 6/292 (2%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P + +N L L K + L L + GL D+ TYN L+ C GR S +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 165 LGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCR 224
L +++ PD V FT+LI + + EA L+ ++ PN +TY+++INGLC
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM 293
Query: 225 TGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNI 284
G A F+ MA+ C PN VTY T+I G CK VD+ +LF +M +
Sbjct: 294 HGRLYDAKKTFDLMASKG------CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 285 NPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASR 344
N D+ TYN+LIHG+C A + M+ + V PD++T +++ LC NG+++ A
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALV 407
Query: 345 LLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
+ M ++ ++ G C +V A ELF + G K +Y
Sbjct: 408 KFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459
Score = 139 bits (351), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 140/285 (49%), Gaps = 12/285 (4%)
Query: 107 LTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 166
+ ++N L L + + + + + + PD+ T+ LI+ F K G + +
Sbjct: 211 VVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYK 270
Query: 167 RILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTG 226
+++S P+ V + S+I GLC R+ +A F + + GC PNV+TY+TLI+G C+
Sbjct: 271 EMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR 330
Query: 227 HTIVALNLFEEMANGNGKFGVVCK---PNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKN 283
+ LF+ M+ C+ + TY T+I G C+ G + A ++F M +
Sbjct: 331 MVDEGMKLFQRMS---------CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381
Query: 284 INPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEAS 343
+ PD++T+ L+HG C + A +M + +V +N+++ LCK K+++A
Sbjct: 382 VTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAW 441
Query: 344 RLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMG 388
L + + GV P+ T++ ++ G C G A EL M+ G
Sbjct: 442 ELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 126/257 (49%), Gaps = 12/257 (4%)
Query: 101 RPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 160
R P + +F L K + D L+K + + + P+ TYN +IN C GR+
Sbjct: 240 RSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYD 299
Query: 161 G---FVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYST 217
F ++ + CF P+ V + +LI G C + E LF ++ G ++ TY+T
Sbjct: 300 AKKTFDLMAS--KGCF-PNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNT 356
Query: 218 LINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFL 277
LI+G C+ G VAL++F M + P+ +T+ ++ GLC G ++ A F
Sbjct: 357 LIHGYCQVGKLRVALDIFCWMVSRR------VTPDIITHCILLHGLCVNGEIESALVKFD 410
Query: 278 QMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNG 337
M++ +V YN +IHG C A+ +A L + +GV+PD T+ +++ LCKNG
Sbjct: 411 DMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG 470
Query: 338 KMDEASRLLELMILRGV 354
EA L+ M G+
Sbjct: 471 PRREADELIRRMKEEGI 487
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 200 bits (509), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/312 (37%), Positives = 169/312 (54%), Gaps = 9/312 (2%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTG---LFPDLYTY 145
+A +FD +L R + N +A+ V S + R+ G + PDL TY
Sbjct: 33 DARHVFDELLR-RGRGASIYGLNRALADVARDSPAAAV-SRYNRMARAGADEVTPDLCTY 90
Query: 146 NILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAAL-FTKLK 204
ILI C C+ GR+ GF LG +++ F DA+AFT L+KGLCA+ R +A + ++
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 205 AFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLC 264
GC PNV +Y+ L+ GLC + AL L MA+ G P+ V+YTT+I+G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGS---PPDVVSYTTVINGFF 207
Query: 265 KEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVV 324
KEG DKA + +M D+ I PDVVTYNS+I C A ++A +L M+ GV PD +
Sbjct: 208 KEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 267
Query: 325 TFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSM 384
T+N I+ C +G+ EA L+ M GV P+ T+S LMD C GR A+++F SM
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327
Query: 385 ESMGCKHTVFSY 396
G K + +Y
Sbjct: 328 TKRGLKPEITTY 339
Score = 191 bits (486), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 169/338 (50%), Gaps = 30/338 (8%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
++A+ + ML+ R P + ++N + L K + D + + + G+ PD TYN
Sbjct: 213 DKAYSTYHEMLD-RGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 271
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
+++ +C G+ L ++ PD V ++ L+ LC R MEA +F + G
Sbjct: 272 ILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRG 331
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMA-NG--------------NGKFGVVCK-- 250
KP + TY TL+ G G + L + M NG K G V +
Sbjct: 332 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAM 391
Query: 251 ------------PNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGF 298
PN VTY +I LCK G V+ A F QM D+ ++P + YNSLIHG
Sbjct: 392 LVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGL 451
Query: 299 CYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNT 358
C N W A L++EM+D+G+ + + FN I+D CK G++ E+ +L ELM+ GV PN
Sbjct: 452 CTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNV 511
Query: 359 STFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
T++TL++G+CL G+++ A +L M S+G K +Y
Sbjct: 512 ITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTY 549
Score = 168 bits (425), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 163/353 (46%), Gaps = 42/353 (11%)
Query: 79 QGDITAITPNEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGL 138
QG T E + D M+ P F++L AK D + +F ++ GL
Sbjct: 344 QGYATKGALVEMHGLLDLMVRNGIHPDHYV-FSILICAYAKQGKVDQAMLVFSKMRQQGL 402
Query: 139 FPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCA--------- 189
P+ TY +I CK GRV + +++ +P + + SLI GLC
Sbjct: 403 NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEE 462
Query: 190 --------------------------ESRIMEAAALFTKLKAFGCKPNVITYSTLINGLC 223
E R++E+ LF + G KPNVITY+TLING C
Sbjct: 463 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYC 522
Query: 224 RTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKN 283
G A+ L +G V KPNTVTY+T+I+G CK ++ A LF +M+
Sbjct: 523 LAGKMDEAMKLL------SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576
Query: 284 INPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEAS 343
++PD++TYN ++ G A L + + + G Q ++ T+N+I+ LCKN D+A
Sbjct: 577 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 636
Query: 344 RLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
++ + + L + TF+ ++D GR + AK+LFV+ S G ++Y
Sbjct: 637 QMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTY 689
Score = 108 bits (269), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 130/279 (46%), Gaps = 9/279 (3%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFG-CLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
E+ +F+ M+ + P +T L+ G CLA D + L + S GL P+ TY+
Sbjct: 494 ESEKLFELMVRIGVKPNVITYNTLINGYCLAG--KMDEAMKLLSGMVSVGLKPNTVTYST 551
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
LIN +CK+ R+ V+ + S +PD + + +++GL R A L+ ++ G
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
+ + TY+ +++GLC+ T AL +F+ + + K T+ +ID L K G
Sbjct: 612 TQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKL------EARTFNIMIDALLKVG 665
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
D+AK+LF+ + P+ TY + E + L + M D G D N
Sbjct: 666 RNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLN 725
Query: 328 VIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMD 366
I+ EL + G++ A L ++ + + ST S +D
Sbjct: 726 FIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764
Score = 104 bits (260), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 118/249 (47%), Gaps = 6/249 (2%)
Query: 129 LFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLC 188
LF+ + G+ P++ TYN LIN +C G++ +L ++ P+ V +++LI G C
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557
Query: 189 AESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVV 248
SR+ +A LF ++++ G P++ITY+ ++ GL +T T A L+ + +
Sbjct: 558 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQI--- 614
Query: 249 CKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEAN 308
TY I+ GLCK D A ++F + ++ + T+N +I +EA
Sbjct: 615 ---ELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAK 671
Query: 309 CLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGF 368
L + G+ P+ T+ ++ + + G ++E +L M G ++ + ++
Sbjct: 672 DLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVREL 731
Query: 369 CLTGRVNHA 377
G + A
Sbjct: 732 LQRGEITRA 740
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 198 bits (504), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 112/309 (36%), Positives = 165/309 (53%), Gaps = 7/309 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
N+A +F M++ RP P + F L +AK YD V+SLF+++ G+ P L T NI
Sbjct: 65 NDALDLFTRMVHSRPLPS-IIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
+++C C + LG++++ F PD V FTSL+ G C +RI +A ALF ++ G
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
KPNV+TY+TLI LC+ H A+ LF +M NG +PN VTY ++ GLC+ G
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGT-NGS-----RPNVVTYNALVTGLCEIG 237
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
A L M + I P+V+T+ +LI F EA L M+ V PDV T+
Sbjct: 238 RWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYG 297
Query: 328 VIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESM 387
+++ LC G +DEA ++ LM G PN ++TL+ GFC + RV ++F M
Sbjct: 298 SLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK 357
Query: 388 GCKHTVFSY 396
G +Y
Sbjct: 358 GVVANTITY 366
Score = 184 bits (467), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 163/308 (52%), Gaps = 7/308 (2%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
+A +FD +L M P + ++ L CL K +H + + LF ++ + G P++ TYN L
Sbjct: 171 DAIALFDQILGM-GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGC 208
+ C++GR +L +++ P+ + FT+LI ++MEA L+ +
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 209 KPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGF 268
P+V TY +LINGLC G A +F M NG C PN V YTT+I G CK
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMER-NG-----CYPNEVIYTTLIHGFCKSKR 343
Query: 269 VDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNV 328
V+ ++F +M K + + +TY LI G+C + A + +M + PD+ T+NV
Sbjct: 344 VEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNV 403
Query: 329 IMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMG 388
++D LC NGK+++A + E M R ++ N T++ ++ G C G+V A +LF S+ S G
Sbjct: 404 LLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKG 463
Query: 389 CKHTVFSY 396
K V +Y
Sbjct: 464 MKPNVITY 471
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 131/274 (47%), Gaps = 8/274 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+ A+ + D M R P + +F L K L+ + ++PD++TY
Sbjct: 241 DAAWLLRDMM--KRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGS 298
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
LIN C G + + + R+ P+ V +T+LI G C R+ + +F ++ G
Sbjct: 299 LINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKG 358
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
N ITY+ LI G C G VA +F +M++ P+ TY ++DGLC G
Sbjct: 359 VVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAP------PDIRTYNVLLDGLCCNG 412
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
V+KA +F M+ + ++ ++VTY +I G C +A L + +G++P+V+T+
Sbjct: 413 KVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYT 472
Query: 328 VIMDELCKNGKMDEASRLLELMILRGVNPNTSTF 361
++ C+ G + EA L + M G PN S +
Sbjct: 473 TMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
Query: 79 QGDITAITPNEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGL 138
QG P+ A +F+ M + R +PP + ++N+L L + L +F+ + +
Sbjct: 371 QGYCLVGRPDVAQEVFNQM-SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREM 429
Query: 139 FPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAA 198
++ TY I+I CK+G+V F + + P+ + +T++I G C I EA +
Sbjct: 430 DINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADS 489
Query: 199 LFTKLKAFGCKPNVITY 215
LF K+K G PN Y
Sbjct: 490 LFKKMKEDGFLPNESVY 506
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 197 bits (502), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 166/292 (56%), Gaps = 6/292 (2%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P +FN L L K H + + + G PD+YTYN +I+ CK+G V V
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 165 LGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCR 224
L +++ +P+ V + +LI LC E+++ EA L L + G P+V T+++LI GLC
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 225 TGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNI 284
T + VA+ LFEEM + C+P+ TY +ID LC +G +D+A + QM+
Sbjct: 413 TRNHRVAMELFEEMRSKG------CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466
Query: 285 NPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASR 344
V+TYN+LI GFC AN EA + EM GV + VT+N ++D LCK+ ++++A++
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQ 526
Query: 345 LLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
L++ MI+ G P+ T+++L+ FC G + A ++ +M S GC+ + +Y
Sbjct: 527 LMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578
Score = 179 bits (453), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 159/328 (48%), Gaps = 42/328 (12%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTY------------------- 145
P +++FN+L L + + + + + S GL PD T+
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 146 ----------------NILINCFCKMGRVSHGFVVLGRIL-RSCFTPDAVAFTSLIKGLC 188
N++++ FCK GRV + + + F PD F +L+ GLC
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 189 AESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVV 248
+ A + + G P+V TY+++I+GLC+ G A+ + ++M +
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD------ 360
Query: 249 CKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEAN 308
C PNTVTY T+I LCKE V++A EL + K I PDV T+NSLI G C + A
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 309 CLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGF 368
L EM +G +PD T+N+++D LC GK+DEA +L+ M L G + T++TL+DGF
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480
Query: 369 CLTGRVNHAKELFVSMESMGCKHTVFSY 396
C + A+E+F ME G +Y
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTY 508
Score = 176 bits (446), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 163/309 (52%), Gaps = 5/309 (1%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+E + D+M++ P +N + L V +++ G+ PD+ T+N+
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNV 194
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
LI C+ ++ ++L + PD FT++++G E + A + ++ FG
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
C + ++ + +++G C+ G ALN +EM+N +G F P+ T+ T+++GLCK G
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF-----PDQYTFNTLVNGLCKAG 309
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
V A E+ M + +PDV TYNS+I G C + EA +L +M+ + P+ VT+N
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 328 VIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESM 387
++ LCK +++EA+ L ++ +G+ P+ TF++L+ G CLT A ELF M S
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 388 GCKHTVFSY 396
GC+ F+Y
Sbjct: 430 GCEPDEFTY 438
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 154/298 (51%), Gaps = 11/298 (3%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA + D M+ R P ++N L L K + L + L S G+ PD+ T+N L
Sbjct: 348 EAVEVLDQMIT-RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSL 406
Query: 149 INCFCKMGRVSHGFVVLGRILRS--CFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAF 206
I C + R + L +RS C PD + LI LC++ ++ EA + +++
Sbjct: 407 IQGLC-LTRNHRVAMELFEEMRSKGC-EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 207 GCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKE 266
GC +VITY+TLI+G C+ T A +F+EM GV N+VTY T+IDGLCK
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEME----VHGV--SRNSVTYNTLIDGLCKS 518
Query: 267 GFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTF 326
V+ A +L QM + PD TYNSL+ FC D +A ++ M G +PD+VT+
Sbjct: 519 RRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578
Query: 327 NVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSM 384
++ LCK G+++ AS+LL + ++G+N ++ ++ G + A LF M
Sbjct: 579 GTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREM 636
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 139/286 (48%), Gaps = 8/286 (2%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P + +FN L L T+++ + LF+ + S G PD +TYN+LI+ C G++ +
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457
Query: 165 LGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCR 224
L ++ S + + +LI G C ++ EA +F +++ G N +TY+TLI+GLC+
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Query: 225 TGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNI 284
+ A L ++M G+ KP+ TY +++ C+ G + KA ++ M
Sbjct: 518 SRRVEDAAQLMDQMIM-EGQ-----KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571
Query: 285 NPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASR 344
PD+VTY +LI G C A A+ LL + +G+ +N ++ L + K EA
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAIN 631
Query: 345 LLELMILRG-VNPNTSTFSTLMDGFC-LTGRVNHAKELFVSMESMG 388
L M+ + P+ ++ + G C G + A + V + G
Sbjct: 632 LFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKG 677
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 7/211 (3%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA IFD M S +T +N L L K++ + L ++ G PD YTYN L
Sbjct: 488 EAEEIFDEMEVHGVSRNSVT-YNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGC 208
+ FC+ G + ++ + + PD V + +LI GLC R+ A+ L ++ G
Sbjct: 547 LTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Query: 209 KPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGF 268
Y+ +I GL R T A+NLF EM N P+ V+Y + GLC G
Sbjct: 607 NLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNE-----APPDAVSYRIVFRGLCNGGG 661
Query: 269 -VDKAKELFLQMKDKNINPDVVTYNSLIHGF 298
+ +A + +++ +K P+ + L G
Sbjct: 662 PIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 192 bits (488), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 178/326 (54%), Gaps = 11/326 (3%)
Query: 71 KERCKSSGQGDITAITPNEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLF 130
+ER +S + +I N+A +F M P P + F+ L +AK Y+ V+SLF
Sbjct: 48 RERLRSG----LHSIKFNDALTLFCDMAESHP-LPSIVDFSRLLIAIAKLNKYEAVISLF 102
Query: 131 KRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAE 190
+ L G+ DLY++ LI+CFC+ R+S LG++++ F P V F SL+ G C
Sbjct: 103 RHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHV 162
Query: 191 SRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCK 250
+R EA +L ++ G +PNV+ Y+T+I+ LC G AL++ + M K G+ +
Sbjct: 163 NRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMK----KMGI--R 216
Query: 251 PNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCL 310
P+ VTY ++I L G + + M I+PDV+T+++LI + EA
Sbjct: 217 PDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQ 276
Query: 311 LIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCL 370
EM+ + V P++VT+N +++ LC +G +DEA ++L +++ +G PN T++TL++G+C
Sbjct: 277 YNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCK 336
Query: 371 TGRVNHAKELFVSMESMGCKHTVFSY 396
RV+ ++ M G F+Y
Sbjct: 337 AKRVDDGMKILCVMSRDGVDGDTFTY 362
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 152/332 (45%), Gaps = 42/332 (12%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA + D ++ + P + +N + L + +T L + K + G+ PD+ TYN L
Sbjct: 167 EAMSLVDQIVGL-GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSL 225
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGC 208
I G +L ++R +PD + F++LI E +++EA + ++
Sbjct: 226 ITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSV 285
Query: 209 KPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGF 268
PN++TY++LINGLC G A + + + G F PN VTY T+I+G CK
Sbjct: 286 NPNIVTYNSLINGLCIHGLLDEAKKVLNVLVS-KGFF-----PNAVTYNTLINGYCKAKR 339
Query: 269 VDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPD------ 322
VD ++ M ++ D TYN+L G+C A ++ A +L M+ GV PD
Sbjct: 340 VDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNI 399
Query: 323 -----------------------------VVTFNVIMDELCKNGKMDEASRLLELMILRG 353
++T+N+I+ LCK K+++A L + L+G
Sbjct: 400 LLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKG 459
Query: 354 VNPNTSTFSTLMDGFCLTGRVNHAKELFVSME 385
V+P+ T+ T+M G A EL+ M+
Sbjct: 460 VSPDVITYITMMIGLRRKRLWREAHELYRKMQ 491
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 7/222 (3%)
Query: 101 RPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 160
R P + ++N L L D + L S G FP+ TYN LIN +CK RV
Sbjct: 283 RSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDD 342
Query: 161 GFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLIN 220
G +L + R D + +L +G C + A + ++ + G P++ T++ L++
Sbjct: 343 GMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLD 402
Query: 221 GLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMK 280
GLC G AL E++ G++ TY II GLCK V+ A LF +
Sbjct: 403 GLCDHGKIGKALVRLEDLQKSKTVVGII------TYNIIIKGLCKADKVEDAWYLFCSLA 456
Query: 281 DKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMM-DQGVQP 321
K ++PDV+TY +++ G W EA+ L +M + G+ P
Sbjct: 457 LKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 192 bits (487), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 172/307 (56%), Gaps = 7/307 (2%)
Query: 90 AFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILI 149
A +FD M + P + ++N L K + D L + + GL P+L +YN++I
Sbjct: 224 ALTLFDKM-ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVI 282
Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCK 209
N C+ GR+ VL + R ++ D V + +LIKG C E +A + ++ G
Sbjct: 283 NGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLT 342
Query: 210 PNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFV 269
P+VITY++LI+ +C+ G+ A+ ++M + +C PN TYTT++DG ++G++
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQM-----RVRGLC-PNERTYTTLVDGFSQKGYM 396
Query: 270 DKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVI 329
++A + +M D +P VVTYN+LI+G C +A +L +M ++G+ PDVV+++ +
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Query: 330 MDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGC 389
+ C++ +DEA R+ M+ +G+ P+T T+S+L+ GFC R A +L+ M +G
Sbjct: 457 LSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Query: 390 KHTVFSY 396
F+Y
Sbjct: 517 PPDEFTY 523
Score = 167 bits (423), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 153/292 (52%), Gaps = 6/292 (2%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P L S+N++ L + V + +N G D TYN LI +CK G V+
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 165 LGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCR 224
+LR TP + +TSLI +C + A +++ G PN TY+TL++G +
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 225 TGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNI 284
G+ A + EM N NG P+ VTY +I+G C G ++ A + MK+K +
Sbjct: 393 KGYMNEAYRVLREM-NDNG-----FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446
Query: 285 NPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASR 344
+PDVV+Y++++ GFC + D +EA + EM+++G++PD +T++ ++ C+ + EA
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 345 LLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
L E M+ G+ P+ T++ L++ +C+ G + A +L M G V +Y
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTY 558
Score = 166 bits (419), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 150/288 (52%), Gaps = 7/288 (2%)
Query: 110 FNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR-VSHGFVVLGRI 168
F+L+ ++ D LS+ + G P + +YN +++ + R +S V +
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 169 LRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHT 228
L S +P+ + LI+G C I A LF K++ GC PNV+TY+TLI+G C+
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 229 IVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDV 288
L MA +PN ++Y +I+GLC+EG + + + +M + + D
Sbjct: 257 DDGFKLLRSMALKG------LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310
Query: 289 VTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLEL 348
VTYN+LI G+C ++++A + EM+ G+ P V+T+ ++ +CK G M+ A L+
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 349 MILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
M +RG+ PN T++TL+DGF G +N A + M G +V +Y
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Score = 155 bits (391), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 157/302 (51%), Gaps = 23/302 (7%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P + ++ L + K + + + ++ GL P+ TY L++ F + G ++ + V
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 165 LGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCR 224
L + + F+P V + +LI G C ++ +A A+ +K G P+V++YST+++G CR
Sbjct: 403 LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 462
Query: 225 TGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNI 284
+ AL + EM KP+T+TY+++I G C++ +A +L+ +M +
Sbjct: 463 SYDVDEALRVKREMVEKG------IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Query: 285 NPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASR 344
PD TY +LI+ +C D +A L EM+++GV PDVVT++V+++ L K + EA R
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKR 576
Query: 345 LLELMILRGVNPNTSTFSTLMD---------------GFCLTGRVNHAKELFVSMESMGC 389
LL + P+ T+ TL++ GFC+ G + A ++F SM +G
Sbjct: 577 LLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM--LGK 634
Query: 390 KH 391
H
Sbjct: 635 NH 636
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 150/293 (51%), Gaps = 7/293 (2%)
Query: 105 PPLTSFNLLFGCLAKTK-HYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 163
P + S+N + ++K + ++FK + + + P+++TYNILI FC G +
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 164 VLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLC 223
+ ++ P+ V + +LI G C +I + L + G +PN+I+Y+ +INGLC
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 224 RTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKN 283
R G + EM N G + VTY T+I G CKEG +A + +M
Sbjct: 287 REGRMKEVSFVLTEM-NRRG-----YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340
Query: 284 INPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEAS 343
+ P V+TY SLIH C A + N A L +M +G+ P+ T+ ++D + G M+EA
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400
Query: 344 RLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
R+L M G +P+ T++ L++G C+TG++ A + M+ G V SY
Sbjct: 401 RVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSY 453
Score = 132 bits (331), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 145/310 (46%), Gaps = 22/310 (7%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
NEA+ + M N P + ++N L T + +++ + + GL PD+ +Y+
Sbjct: 397 NEAYRVLREM-NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
+++ FC+ V V ++ PD + ++SLI+G C + R EA L+ ++ G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
P+ TY+ LIN C G AL L EM GV+ P+ VTY+ +I+GL K+
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK----GVL--PDVVTYSVLINGLNKQS 569
Query: 268 FVDKAKELFLQMKDKNINPDVVTYN---------------SLIHGFCYANDWNEANCLLI 312
+AK L L++ + P VTY+ SLI GFC EA+ +
Sbjct: 570 RTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFE 629
Query: 313 EMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTG 372
M+ + +PD +N+++ C+ G + +A L + M+ G +T T L+ G
Sbjct: 630 SMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEG 689
Query: 373 RVNHAKELFV 382
+VN + V
Sbjct: 690 KVNELNSVIV 699
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 122/226 (53%), Gaps = 8/226 (3%)
Query: 172 CFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTI-V 230
C++ +V F ++K S I +A ++ +A G P V++Y+ +++ R+ I
Sbjct: 130 CYSTSSV-FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISF 188
Query: 231 ALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVT 290
A N+F+EM PN TY +I G C G +D A LF +M+ K P+VVT
Sbjct: 189 AENVFKEMLESQ------VSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVT 242
Query: 291 YNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMI 350
YN+LI G+C ++ LL M +G++P+++++NV+++ LC+ G+M E S +L M
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302
Query: 351 LRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
RG + + T++TL+ G+C G + A + M G +V +Y
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 348
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 115/285 (40%), Gaps = 22/285 (7%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+EA + M+ P +T +L+ G + + L++ + GL PD +TY
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQG-FCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
LIN +C G + + ++ PD V ++ LI GL +SR EA L KL
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585
Query: 208 CKPNVITYSTLIN---------------GLCRTGHTIVALNLFEEMANGNGKFGVVCKPN 252
P+ +TY TLI G C G A +FE M N K P+
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHK------PD 639
Query: 253 TVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLI 312
Y +I G C+ G + KA L+ +M VT +L+ NE N +++
Sbjct: 640 GTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIV 699
Query: 313 EMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPN 357
++ + V+++ + G MD +L M G PN
Sbjct: 700 HVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 36/177 (20%)
Query: 248 VCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNS-------------- 293
+C + + ++ + +DKA + + P V++YN+
Sbjct: 129 LCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISF 188
Query: 294 ----------------------LIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMD 331
LI GFC+A + + A L +M +G P+VVT+N ++D
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 332 ELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMG 388
CK K+D+ +LL M L+G+ PN +++ +++G C GR+ + M G
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 1/126 (0%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA +F+ ML + P T++N++ + +L+K + +G T L
Sbjct: 623 EADQVFESMLG-KNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIAL 681
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGC 208
+ K G+V+ V+ +LRSC +A L++ E + + ++ G
Sbjct: 682 VKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGF 741
Query: 209 KPNVIT 214
PN I+
Sbjct: 742 LPNGIS 747
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 191 bits (485), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 186/344 (54%), Gaps = 42/344 (12%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+++ +F +M+ RP P + F+ L ++K K YD V+ L++++ G+ +L T NI
Sbjct: 63 DDSLDLFFHMVQCRP-LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
L+NCFC+ ++S LG++++ P V F SL+ G C R+ +A +F ++ G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLC--- 264
KPNV+ Y+T+I+GLC++ AL+L M K G+ P+ VTY ++I GLC
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRME----KDGI--GPDVVTYNSLISGLCSSG 235
Query: 265 --------------------------------KEGFVDKAKELFLQMKDKNINPDVVTYN 292
KEG V +A+E + +M ++++PD+VTY+
Sbjct: 236 RWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYS 295
Query: 293 SLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILR 352
LI+G C + +EA + M+ +G PDVVT++++++ CK+ K++ +L M R
Sbjct: 296 LLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Query: 353 GVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
GV NT T++ L+ G+C G++N A+E+F M G + +Y
Sbjct: 356 GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITY 399
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 168/335 (50%), Gaps = 42/335 (12%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
+A +FD M+ M P + +N + L K+K D L L R+ G+ PD+ TYN L
Sbjct: 169 DALYMFDQMVGM-GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSL 227
Query: 149 INCFC-----------------------------------KMGRVSHGFVVLGRILRSCF 173
I+ C K GRVS ++R
Sbjct: 228 ISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL 287
Query: 174 TPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALN 233
PD V ++ LI GLC SR+ EA +F + + GC P+V+TYS LING C++ +
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347
Query: 234 LFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNS 293
LF EM+ + GVV NTVTYT +I G C+ G ++ A+E+F +M ++P+++TYN
Sbjct: 348 LFCEMS----QRGVV--RNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401
Query: 294 LIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRG 353
L+HG C +A +L +M G+ D+VT+N+I+ +CK G++ +A + + +G
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461
Query: 354 VNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMG 388
+ P+ T++T+M G G A LF M+ G
Sbjct: 462 LMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDG 496
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%)
Query: 269 VDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNV 328
+D + +LF M P + ++ L+ ++ L +M G+ ++ T N+
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 329 IMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMG 388
+++ C+ ++ A L MI G P+ TF +L++GFC RV A +F M MG
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 389 CKHTVFSY 396
K V Y
Sbjct: 182 YKPNVVIY 189
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 189 bits (480), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 164/321 (51%), Gaps = 29/321 (9%)
Query: 97 MLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 156
++ ++ P + S++ + + D V L + + GL P+ Y Y +I C++
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 157 RVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYS 216
+++ ++R PD V +T+LI G C I A+ F ++ + P+V+TY+
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 217 TLINGLCRTGHTIVALNLFEEM---------------ANGNGKFGVV------------- 248
+I+G C+ G + A LF EM NG K G +
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450
Query: 249 -CKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEA 307
C PN VTYTT+IDGLCKEG +D A EL +M + P++ TYNS+++G C + + EA
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 308 NCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDG 367
L+ E G+ D VT+ +MD CK+G+MD+A +L+ M+ +G+ P TF+ LM+G
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 368 FCLTGRVNHAKELFVSMESMG 388
FCL G + ++L M + G
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKG 591
Score = 181 bits (459), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 152/272 (55%), Gaps = 6/272 (2%)
Query: 125 TVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLI 184
T + +F+ G+ ++ +YNI+I+ C++GR+ +L + +TPD +++++++
Sbjct: 229 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 185 KGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGK 244
G C + + L +K G KPN Y ++I LCR A F EM +
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI----R 344
Query: 245 FGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDW 304
G++ P+TV YTT+IDG CK G + A + F +M ++I PDV+TY ++I GFC D
Sbjct: 345 QGIL--PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 305 NEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTL 364
EA L EM +G++PD VTF +++ CK G M +A R+ MI G +PN T++TL
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 365 MDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
+DG C G ++ A EL M +G + +F+Y
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTY 494
Score = 179 bits (453), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 154/284 (54%), Gaps = 6/284 (2%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P + L K F ++S + PD+ TY +I+ FC++G + +
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 165 LGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCR 224
+ PD+V FT LI G C + +A + + GC PNV+TY+TLI+GLC+
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 225 TGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNI 284
G A L EM + + +PN TY +I++GLCK G +++A +L + + +
Sbjct: 469 EGDLDSANELLHEM------WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 285 NPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASR 344
N D VTY +L+ +C + + ++A +L EM+ +G+QP +VTFNV+M+ C +G +++ +
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582
Query: 345 LLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMG 388
LL M+ +G+ PN +TF++L+ +C+ + A ++ M S G
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Score = 172 bits (437), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 162/318 (50%), Gaps = 12/318 (3%)
Query: 79 QGDITAITPNEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGL 138
+GDI A + F Y ++ R P + ++ + + LF + GL
Sbjct: 364 RGDIRAASK------FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Query: 139 FPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAA 198
PD T+ LIN +CK G + F V ++++ +P+ V +T+LI GLC E + A
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 199 LFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTT 258
L ++ G +PN+ TY++++NGLC++G+ A+ L E +TVTYTT
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG------LNADTVTYTT 531
Query: 259 IIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQG 318
++D CK G +DKA+E+ +M K + P +VT+N L++GFC + LL M+ +G
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 319 VQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAK 378
+ P+ TFN ++ + C + A+ + + M RGV P+ T+ L+ G C + A
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 379 ELFVSMESMGCKHTVFSY 396
LF M+ G +V +Y
Sbjct: 652 FLFQEMKGKGFSVSVSTY 669
Score = 159 bits (401), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 163/319 (51%), Gaps = 29/319 (9%)
Query: 107 LTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 166
+ S+N++ + + L + G PD+ +Y+ ++N +C+ G + + ++
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 167 RILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTG 226
+ R P++ + S+I LC ++ EA F+++ G P+ + Y+TLI+G C+ G
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 227 HTIVALNLFEEMANGN------------------------GKF--GVVCK---PNTVTYT 257
A F EM + + GK + CK P++VT+T
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 258 TIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQ 317
+I+G CK G + A + M +P+VVTY +LI G C D + AN LL EM
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 318 GVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHA 377
G+QP++ T+N I++ LCK+G ++EA +L+ G+N +T T++TLMD +C +G ++ A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 378 KELFVSMESMGCKHTVFSY 396
+E+ M G + T+ ++
Sbjct: 546 QEILKEMLGKGLQPTIVTF 564
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 135/305 (44%), Gaps = 15/305 (4%)
Query: 62 DRASLEQFLKERCKSSGQGDITAITPNEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTK 121
D + + + CK+ D AF + ++M+ SP +T L+ G L K
Sbjct: 420 DSVTFTELINGYCKAGHMKD--------AFRVHNHMIQAGCSPNVVTYTTLIDG-LCKEG 470
Query: 122 HYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFT 181
D+ L + GL P+++TYN ++N CK G + ++G + D V +T
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 182 SLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANG 241
+L+ C + +A + ++ G +P ++T++ L+NG C G L E++ N
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG----MLEDGEKLLNW 586
Query: 242 NGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYA 301
G+ PN T+ +++ C + A ++ M + + PD TY +L+ G C A
Sbjct: 587 MLAKGIA--PNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 644
Query: 302 NDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTF 361
+ EA L EM +G V T++V++ K K EA + + M G+ + F
Sbjct: 645 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Query: 362 STLMD 366
D
Sbjct: 705 DFFSD 709
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/333 (33%), Positives = 179/333 (53%), Gaps = 11/333 (3%)
Query: 64 ASLEQFLKERCKSSGQGDITAITPNEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHY 123
AS +ER ++ ++ I ++AF +F ML RP P + F + +AK +
Sbjct: 41 ASHHHHYRERLRN----ELHCIKFDDAFSLFCEMLQSRP-IPSIVDFTRVLTVIAKMNKF 95
Query: 124 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSL 183
D V+ L+ ++ + G+ DLY++ ILI+CFC+ R+S +LG++++ F P V SL
Sbjct: 96 DIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSL 155
Query: 184 IKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNG 243
+ G C +R EA +L + FG PNV+ Y+T+INGLC+ AL +F M
Sbjct: 156 LNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCME---- 211
Query: 244 KFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYAND 303
K G+ + + VTY T+I GL G A L M + I+P+V+ + +LI F +
Sbjct: 212 KKGI--RADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 269
Query: 304 WNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFST 363
EA L EM+ + V P+V T+N +++ C +G + +A + +LM+ +G P+ T++T
Sbjct: 270 LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNT 329
Query: 364 LMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
L+ GFC + RV +LF M G F+Y
Sbjct: 330 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362
Score = 164 bits (414), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 153/292 (52%), Gaps = 6/292 (2%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P + +N + L K + + L +F + G+ D TYN LI+ GR + +
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 165 LGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCR 224
L +++ P+ + FT+LI E ++EA L+ ++ PNV TY++LING C
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 225 TGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNI 284
G A +F+ M + C P+ VTY T+I G CK V+ +LF +M + +
Sbjct: 302 HGCLGDAKYMFDLMVSKG------CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 355
Query: 285 NPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASR 344
D TYN+LIHG+C A N A + M+D GV PD+VT+N+++D LC NGK+++A
Sbjct: 356 VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALV 415
Query: 345 LLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
++E + ++ + T++ ++ G C T ++ A LF S+ G K +Y
Sbjct: 416 MVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAY 467
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 147/301 (48%), Gaps = 7/301 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
N A +F Y + + ++N L L+ + + L + + + P++ +
Sbjct: 201 NNALEVF-YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
LI+ F K G + + ++R P+ + SLI G C + +A +F + + G
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
C P+V+TY+TLI G C++ + LF EM G G + TY T+I G C+ G
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY-QGLVG-----DAFTYNTLIHGYCQAG 373
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
++ A+++F +M D ++PD+VTYN L+ C +A ++ ++ + D++T+N
Sbjct: 374 KLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYN 433
Query: 328 VIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESM 387
+I+ LC+ K+ EA L + +GV P+ + T++ G C G A +L M+
Sbjct: 434 IIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 493
Query: 388 G 388
G
Sbjct: 494 G 494
Score = 136 bits (342), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 135/272 (49%), Gaps = 13/272 (4%)
Query: 101 RPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCK---MGR 157
R P + F L K + +L+K + + P+++TYN LIN FC +G
Sbjct: 248 RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 307
Query: 158 VSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYST 217
+ F ++ + + CF PD V + +LI G C R+ + LF ++ G + TY+T
Sbjct: 308 AKYMFDLM--VSKGCF-PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364
Query: 218 LINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFL 277
LI+G C+ G VA +F M + GV P+ VTY ++D LC G ++KA +
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVDC----GV--SPDIVTYNILLDCLCNNGKIEKALVMVE 418
Query: 278 QMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNG 337
++ ++ D++TYN +I G C + EA CL + +GV+PD + + ++ LC+ G
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478
Query: 338 KMDEASRLLELMILRGVNPNTSTF-STLMDGF 368
EA +L M G P+ + TL D +
Sbjct: 479 LQREADKLCRRMKEDGFMPSERIYDETLRDHY 510
>sp|Q9SZ20|PP339_ARATH Pentatricopeptide repeat-containing protein At4g26800
OS=Arabidopsis thaliana GN=At4g26800 PE=2 SV=2
Length = 514
Score = 184 bits (466), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 172/304 (56%), Gaps = 10/304 (3%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRL-NSTGL--FPDLYT 144
++AF +F M P P + FN + +AK + YD V++L+KR+ N+ G+ PDLYT
Sbjct: 67 DDAFHLFVLMAYSYPLPS-IVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYT 125
Query: 145 YNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLK 204
NIL+NCFC+ + S LG++++ PD V +SL+ G C + I +A + +++
Sbjct: 126 CNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQME 185
Query: 205 AFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLC 264
G K +V+ + LI+ LC+ + AL + + M + PN VTY+++I GLC
Sbjct: 186 KMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRG------ISPNVVTYSSLITGLC 239
Query: 265 KEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVV 324
K G + A+ +M K INP+V+T+++LI + ++ + + M+ + P+V
Sbjct: 240 KSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVF 299
Query: 325 TFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSM 384
T++ ++ LC + ++DEA ++L+LMI +G PN T+STL +GF + RV+ +L M
Sbjct: 300 TYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDM 359
Query: 385 ESMG 388
G
Sbjct: 360 PQRG 363
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 131/274 (47%), Gaps = 6/274 (2%)
Query: 112 LLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRS 171
+L L K + L + KR+ G+ P++ TY+ LI CK GR++ L +
Sbjct: 198 ILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSK 257
Query: 172 CFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVA 231
P+ + F++LI ++ + +++ + PNV TYS+LI GLC A
Sbjct: 258 KINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEA 317
Query: 232 LNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTY 291
+ + + M + C PN VTY+T+ +G K VD +L M + + + V+
Sbjct: 318 IKMLDLMISKG------CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSC 371
Query: 292 NSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMIL 351
N+LI G+ A + A + M G+ P++ ++N+++ L NG++++A E M
Sbjct: 372 NTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQK 431
Query: 352 RGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSME 385
+ + T++ ++ G C V A +LF ++
Sbjct: 432 TRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLK 465
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 124/274 (45%), Gaps = 29/274 (10%)
Query: 101 RPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 160
R P + +++ L L K+ ++S + P++ T++ LI+ + K G++S
Sbjct: 222 RGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSK 281
Query: 161 GFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLIN 220
V +++ P+ ++SLI GLC +R+ EA + + + GC PNV+TYSTL N
Sbjct: 282 VDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLAN 341
Query: 221 GLCRTGHTIVALNLFEEMANGN-------------------------GKFGVVCK----P 251
G ++ + L ++M G FG + P
Sbjct: 342 GFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIP 401
Query: 252 NTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLL 311
N +Y ++ GL G V+KA F M+ + D++TY +IHG C A EA L
Sbjct: 402 NIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLF 461
Query: 312 IEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRL 345
++ + V+PD + +++ EL + G EA L
Sbjct: 462 YKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 495
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 127/299 (42%), Gaps = 71/299 (23%)
Query: 167 RILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTG 226
R F+ + + +++ + +A LF + P+++ ++ ++ + +
Sbjct: 40 RFWVRAFSGTTIDYREVLRSGLHNIKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQ 99
Query: 227 HTIVALNLFEEMANGNG----------------------------------KFGVVCKPN 252
V +NL++ + N G K G+ +P+
Sbjct: 100 MYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGI--EPD 157
Query: 253 TVTYTTIIDG-----------------------------------LCKEGFVDKAKELFL 277
VT +++++G LCK V A E+
Sbjct: 158 IVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLK 217
Query: 278 QMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNG 337
+MKD+ I+P+VVTY+SLI G C + +A L EM + + P+V+TF+ ++D K G
Sbjct: 218 RMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRG 277
Query: 338 KMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
K+ + + ++MI ++PN T+S+L+ G C+ RV+ A ++ M S GC V +Y
Sbjct: 278 KLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTY 336
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 7/218 (3%)
Query: 93 IFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 152
++ M+ M P T +L++G L D + + + S G P++ TY+ L N F
Sbjct: 285 VYKMMIQMSIDPNVFTYSSLIYG-LCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGF 343
Query: 153 CKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNV 212
K RV G +L + + + V+ +LIKG +I A +F + + G PN+
Sbjct: 344 FKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNI 403
Query: 213 ITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKA 272
+Y+ ++ GL G AL+ FE M + +TYT +I G+CK V +A
Sbjct: 404 RSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDI------ITYTIMIHGMCKACMVKEA 457
Query: 273 KELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCL 310
+LF ++K K + PD Y +I A EA+ L
Sbjct: 458 YDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 495
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 184 bits (466), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/257 (36%), Positives = 144/257 (56%), Gaps = 6/257 (2%)
Query: 140 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAAL 199
PD++ YN LIN FCKM R+ VL R+ F+PD V + +I LC+ ++ A +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 200 FTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTI 259
+L + C+P VITY+ LI G AL L +EM + KP+ TY TI
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG------LKPDMFTYNTI 269
Query: 260 IDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGV 319
I G+CKEG VD+A E+ ++ K PDV++YN L+ W E L+ +M +
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 320 QPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKE 379
P+VVT+++++ LC++GK++EA LL+LM +G+ P+ ++ L+ FC GR++ A E
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 380 LFVSMESMGCKHTVFSY 396
+M S GC + +Y
Sbjct: 390 FLETMISDGCLPDIVNY 406
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 152/309 (49%), Gaps = 7/309 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+EA + D ML+ R P + ++N + + K D + + L G PD+ +YNI
Sbjct: 245 DEALKLMDEMLS-RGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
L+ G+ G ++ ++ P+ V ++ LI LC + +I EA L +K G
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
P+ +Y LI CR G VA+ E M + C P+ V Y T++ LCK G
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG------CLPDIVNYNTVLATLCKNG 417
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
D+A E+F ++ + +P+ +YN++ + D A +++EMM G+ PD +T+N
Sbjct: 418 KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477
Query: 328 VIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESM 387
++ LC+ G +DEA LL M +P+ T++ ++ GFC R+ A + SM
Sbjct: 478 SMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGN 537
Query: 388 GCKHTVFSY 396
GC+ +Y
Sbjct: 538 GCRPNETTY 546
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 144/284 (50%), Gaps = 8/284 (2%)
Query: 98 LNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 157
L ++ P + S+N+L L ++ L ++ S P++ TY+ILI C+ G+
Sbjct: 289 LELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGK 348
Query: 158 VSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYST 217
+ +L + TPDA ++ LI C E R+ A + + GC P+++ Y+T
Sbjct: 349 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNT 408
Query: 218 LINGLCRTGHTIVALNLFEEMANGNGKFGVV-CKPNTVTYTTIIDGLCKEGFVDKAKELF 276
++ LC+ G AL +F GK G V C PN+ +Y T+ L G +A +
Sbjct: 409 VLATLCKNGKADQALEIF-------GKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMI 461
Query: 277 LQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKN 336
L+M I+PD +TYNS+I C +EA LL++M P VVT+N+++ CK
Sbjct: 462 LEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKA 521
Query: 337 GKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKEL 380
++++A +LE M+ G PN +T++ L++G G A EL
Sbjct: 522 HRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 155 bits (392), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 149/309 (48%), Gaps = 7/309 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
++A + D M + SP +T +N++ G L D L + +L S P + TY I
Sbjct: 175 DDATRVLDRMRSKDFSPDTVT-YNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTI 233
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
LI G V ++ +L PD + ++I+G+C E + A + L+ G
Sbjct: 234 LIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKG 293
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
C+P+VI+Y+ L+ L G L +M F C PN VTY+ +I LC++G
Sbjct: 294 CEPDVISYNILLRALLNQGKWEEGEKLMTKM------FSEKCDPNVVTYSILITTLCRDG 347
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
+++A L MK+K + PD +Y+ LI FC + A L M+ G PD+V +N
Sbjct: 348 KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYN 407
Query: 328 VIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESM 387
++ LCKNGK D+A + + G +PN+S+++T+ +G A + + M S
Sbjct: 408 TVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN 467
Query: 388 GCKHTVFSY 396
G +Y
Sbjct: 468 GIDPDEITY 476
Score = 78.6 bits (192), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P +S+N +F L + L + + S G+ PD TYN +I+C C+ G V F +
Sbjct: 436 PNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFEL 495
Query: 165 LGRILRSC-FTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLC 223
L +RSC F P V + ++ G C RI +A + + GC+PN TY+ LI G+
Sbjct: 496 LVD-MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIG 554
Query: 224 RTGHTIVALNLFEEMA 239
G+ A+ L ++
Sbjct: 555 FAGYRAEAMELANDLV 570
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 183 bits (464), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 158/295 (53%), Gaps = 12/295 (4%)
Query: 102 PSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHG 161
P P T+ F L KT+ +L + L +G PD+ TYN++I+ +CK G +++
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEI---LEGSGAVPDVITYNVMISGYCKAGEINNA 191
Query: 162 FVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLING 221
VL R+ +PD V + ++++ LC ++ +A + ++ C P+VITY+ LI
Sbjct: 192 LSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA 248
Query: 222 LCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKD 281
CR A+ L +EM + C P+ VTY +++G+CKEG +D+A + M
Sbjct: 249 TCRDSGVGHAMKLLDEMRDRG------CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302
Query: 282 KNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDE 341
P+V+T+N ++ C W +A LL +M+ +G P VVTFN++++ LC+ G +
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362
Query: 342 ASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
A +LE M G PN+ +++ L+ GFC +++ A E M S GC + +Y
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTY 417
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 165/328 (50%), Gaps = 15/328 (4%)
Query: 69 FLKERCKSSGQGDITAITPNEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLS 128
++ C+ SG G A + D M + R P + ++N+L + K D +
Sbjct: 245 LIEATCRDSGVG--------HAMKLLDEMRD-RGCTPDVVTYNVLVNGICKEGRLDEAIK 295
Query: 129 LFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLC 188
+ S+G P++ T+NI++ C GR +L +LR F+P V F LI LC
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 189 AESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVV 248
+ + A + K+ GC+PN ++Y+ L++G C+ A+ E M +
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG------ 409
Query: 249 CKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEAN 308
C P+ VTY T++ LCK+G V+ A E+ Q+ K +P ++TYN++I G A +A
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 309 CLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGF 368
LL EM + ++PD +T++ ++ L + GK+DEA + G+ PN TF+++M G
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 529
Query: 369 CLTGRVNHAKELFVSMESMGCKHTVFSY 396
C + + + A + V M + GCK SY
Sbjct: 530 CKSRQTDRAIDFLVFMINRGCKPNETSY 557
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 148/287 (51%), Gaps = 9/287 (3%)
Query: 98 LNMRPS---PPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCK 154
LN PS P + + N++ + T + L + G P + T+NILIN C+
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356
Query: 155 MGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVIT 214
G + +L ++ + P+++++ L+ G C E ++ A ++ + GC P+++T
Sbjct: 357 KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Query: 215 YSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 274
Y+T++ LC+ G A+ + ++++ C P +TY T+IDGL K G KA +
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKG------CSPVLITYNTVIDGLAKAGKTGKAIK 470
Query: 275 LFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELC 334
L +M+ K++ PD +TY+SL+ G +EA E G++P+ VTFN IM LC
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530
Query: 335 KNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELF 381
K+ + D A L MI RG PN ++++ L++G G A EL
Sbjct: 531 KSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577
Score = 152 bits (383), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 141/275 (51%), Gaps = 17/275 (6%)
Query: 122 HYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFT 181
HY +V NS+ D+ + N L + G + GF L ++ PD + T
Sbjct: 90 HYSSV-------NSSFALEDVESNNHLRQ-MVRTGELEEGFKFLENMVYHGNVPDIIPCT 141
Query: 182 SLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANG 241
+LI+G C + +AA + L+ G P+VITY+ +I+G C+ G AL++ + M+
Sbjct: 142 TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS-- 199
Query: 242 NGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYA 301
P+ VTY TI+ LC G + +A E+ +M ++ PDV+TY LI C
Sbjct: 200 -------VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRD 252
Query: 302 NDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTF 361
+ A LL EM D+G PDVVT+NV+++ +CK G++DEA + L M G PN T
Sbjct: 253 SGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITH 312
Query: 362 STLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
+ ++ C TGR A++L M G +V ++
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Score = 144 bits (364), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 144/257 (56%), Gaps = 8/257 (3%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P + +FN+L L + + + +++ G P+ +YN L++ FCK ++
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 165 LGRIL-RSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLC 223
L R++ R C+ PD V + +++ LC + ++ +A + +L + GC P +ITY+T+I+GL
Sbjct: 402 LERMVSRGCY-PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460
Query: 224 RTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKN 283
+ G T A+ L +EM + KP+T+TY++++ GL +EG VD+A + F + +
Sbjct: 461 KAGKTGKAIKLLDEMRAKD------LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 284 INPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEAS 343
I P+ VT+NS++ G C + + A L+ M+++G +P+ ++ ++++ L G EA
Sbjct: 515 IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEAL 574
Query: 344 RLLELMILRGVNPNTST 360
LL + +G+ +S
Sbjct: 575 ELLNELCNKGLMKKSSA 591
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 180 bits (457), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/319 (35%), Positives = 161/319 (50%), Gaps = 30/319 (9%)
Query: 97 MLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 156
++ P P +T NL++G +K + + L K +N GL PD YTYN LI +CK G
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNE-GLEPDSYTYNTLIAGYCKGG 335
Query: 157 RVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYS 216
V ++G + + F PD + SLI GLC E A ALF + G KPNVI Y+
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 395
Query: 217 TLINGLCRTGHTIVALNLFEEMA---------------NGNGKFGVVCK----------- 250
TLI GL G + A L EM+ NG K G V
Sbjct: 396 TLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK 455
Query: 251 ---PNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEA 307
P+ T+ +I G + ++ A E+ M D ++PDV TYNSL++G C + + +
Sbjct: 456 GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDV 515
Query: 308 NCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDG 367
M+++G P++ TFN++++ LC+ K+DEA LLE M + VNP+ TF TL+DG
Sbjct: 516 METYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDG 575
Query: 368 FCLTGRVNHAKELFVSMES 386
FC G ++ A LF ME
Sbjct: 576 FCKNGDLDGAYTLFRKMEE 594
Score = 162 bits (411), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 153/296 (51%), Gaps = 6/296 (2%)
Query: 101 RPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSH 160
R P L ++NL L + D + + L G PD+ TYN LI CK +
Sbjct: 245 RGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQE 304
Query: 161 GFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLIN 220
V LG+++ PD+ + +LI G C + A + G P+ TY +LI+
Sbjct: 305 AEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLID 364
Query: 221 GLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMK 280
GLC G T AL LF E A G G KPN + Y T+I GL +G + +A +L +M
Sbjct: 365 GLCHEGETNRALALFNE-ALGKG-----IKPNVILYNTLIKGLSNQGMILEAAQLANEMS 418
Query: 281 DKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMD 340
+K + P+V T+N L++G C ++A+ L+ M+ +G PD+ TFN+++ KM+
Sbjct: 419 EKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKME 478
Query: 341 EASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
A +L++M+ GV+P+ T+++L++G C T + E + +M GC +F++
Sbjct: 479 NALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTF 534
Score = 162 bits (411), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 155/291 (53%), Gaps = 8/291 (2%)
Query: 107 LTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 166
L++FN L L K L ++ G+ P+L+TYN+ I C+ G + ++G
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275
Query: 167 RILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTG 226
++ PD + + +LI GLC S+ EA K+ G +P+ TY+TLI G C+ G
Sbjct: 276 CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 227 HTIVALNLFEEMANGNGKF-GVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNIN 285
+A E G+ F G V P+ TY ++IDGLC EG ++A LF + K I
Sbjct: 336 MVQLA-----ERIVGDAVFNGFV--PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388
Query: 286 PDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRL 345
P+V+ YN+LI G EA L EM ++G+ P+V TFN++++ LCK G + +A L
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448
Query: 346 LELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
+++MI +G P+ TF+ L+ G+ ++ +A E+ M G V++Y
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTY 499
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 153/309 (49%), Gaps = 7/309 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
EA +F+ M + P + S+N + L + ++D ++ R+ G+ PD+Y++ I
Sbjct: 93 QEAVNVFERM-DFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
+ FCK R +L + + VA+ +++ G E+ E LF K+ A G
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
+ T++ L+ LC+ G L +++ K GV+ PN TY I GLC+ G
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI----KRGVL--PNLFTYNLFIQGLCQRG 265
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
+D A + + ++ PDV+TYN+LI+G C + + EA L +M+++G++PD T+N
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Query: 328 VIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESM 387
++ CK G + A R++ + G P+ T+ +L+DG C G N A LF
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385
Query: 388 GCKHTVFSY 396
G K V Y
Sbjct: 386 GIKPNVILY 394
Score = 148 bits (374), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 143/285 (50%), Gaps = 7/285 (2%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P + +FN+L L K L K + S G FPD++T+NILI+ + ++ + +
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Query: 165 LGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCR 224
L +L + PD + SL+ GLC S+ + + + GC PN+ T++ L+ LCR
Sbjct: 484 LDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543
Query: 225 TGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDK-N 283
AL L EEM N + P+ VT+ T+IDG CK G +D A LF +M++
Sbjct: 544 YRKLDEALGLLEEMKNKS------VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597
Query: 284 INPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEAS 343
++ TYN +IH F + A L EM+D+ + PD T+ +++D CK G ++
Sbjct: 598 VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGY 657
Query: 344 RLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMG 388
+ L M+ G P+ +T +++ C+ RV A + M G
Sbjct: 658 KFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKG 702
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 119/254 (46%), Gaps = 10/254 (3%)
Query: 79 QGDITAITPNEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGL 138
G T + A I D ML+ P + ++N L L KT ++ V+ +K + G
Sbjct: 469 HGYSTQLKMENALEILDVMLD-NGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527
Query: 139 FPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAA 198
P+L+T+NIL+ C+ ++ +L + PDAV F +LI G C + A
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587
Query: 199 LFTKLK-AFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYT 257
LF K++ A+ + TY+ +I+ + +A LF+EM + P+ TY
Sbjct: 588 LFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDR------CLGPDGYTYR 641
Query: 258 TIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQ 317
++DG CK G V+ + L+M + P + T +I+ C + EA ++ M+ +
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Query: 318 GVQPDVVTFNVIMD 331
G+ P+ V N I D
Sbjct: 702 GLVPEAV--NTICD 713
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 118/245 (48%), Gaps = 6/245 (2%)
Query: 152 FCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPN 211
+ + G+V V R+ P ++ +++ L +A ++ +++ G P+
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 212 VITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDK 271
V +++ + C+T AL L M++ C+ N V Y T++ G +E F +
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQG------CEMNVVAYCTVVGGFYEENFKAE 199
Query: 272 AKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMD 331
ELF +M ++ + T+N L+ C D E LL +++ +GV P++ T+N+ +
Sbjct: 200 GYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQ 259
Query: 332 ELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKH 391
LC+ G++D A R++ +I +G P+ T++ L+ G C + A+ M + G +
Sbjct: 260 GLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEP 319
Query: 392 TVFSY 396
++Y
Sbjct: 320 DSYTY 324
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 166/310 (53%), Gaps = 6/310 (1%)
Query: 79 QGDITAITPNEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGL 138
G +T ++A + M+ P + ++N L K L + + + G
Sbjct: 361 HGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGC 420
Query: 139 FPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAA 198
P++Y+Y IL++ FCK+G++ + VL + P+ V F LI C E RI EA
Sbjct: 421 KPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVE 480
Query: 199 LFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTT 258
+F ++ GCKP+V T+++LI+GLC AL L +M + GVV NTVTY T
Sbjct: 481 IFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE----GVVA--NTVTYNT 534
Query: 259 IIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQG 318
+I+ + G + +A++L +M + D +TYNSLI G C A + ++A L +M+ G
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 319 VQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAK 378
P ++ N++++ LC++G ++EA + M+LRG P+ TF++L++G C GR+
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Query: 379 ELFVSMESMG 388
+F +++ G
Sbjct: 655 TMFRKLQAEG 664
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/330 (31%), Positives = 159/330 (48%), Gaps = 41/330 (12%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
NEA + + M M P T +++ G L K + + R+ G PD TY
Sbjct: 269 NEALQLLEEMFLMGCVPDAETFNDVILG-LCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327
Query: 148 LINCFCKMGRVS---------------------HGFVVLGR------ILRSCFT-----P 175
L+N CK+GRV HGFV GR +L T P
Sbjct: 328 LMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387
Query: 176 DAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLF 235
D + SLI G E + A + ++ GCKPNV +Y+ L++G C+ G A N+
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL 447
Query: 236 EEM-ANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSL 294
EM A+G KPNTV + +I CKE + +A E+F +M K PDV T+NSL
Sbjct: 448 NEMSADG-------LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Query: 295 IHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGV 354
I G C ++ A LL +M+ +GV + VT+N +++ + G++ EA +L+ M+ +G
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560
Query: 355 NPNTSTFSTLMDGFCLTGRVNHAKELFVSM 384
+ T+++L+ G C G V+ A+ LF M
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 152/332 (45%), Gaps = 31/332 (9%)
Query: 93 IFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 152
+F ML+ R PP L +F ++ D+ LSL + + G P+ Y LI+
Sbjct: 204 VFYDMLS-RKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSL 262
Query: 153 CKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNV 212
K RV+ +L + PDA F +I GLC RI EAA + ++ G P+
Sbjct: 263 SKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDD 322
Query: 213 ITYSTLINGLCRTGHTIVALNLFEEMAN--------------GNGK-------------- 244
ITY L+NGLC+ G A +LF + +G+
Sbjct: 323 ITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTS 382
Query: 245 FGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDW 304
+G+V P+ TY ++I G KEG V A E+ M++K P+V +Y L+ GFC
Sbjct: 383 YGIV--PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKI 440
Query: 305 NEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTL 364
+EA +L EM G++P+ V FN ++ CK ++ EA + M +G P+ TF++L
Sbjct: 441 DEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Query: 365 MDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
+ G C + HA L M S G +Y
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVANTVTY 532
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 152/336 (45%), Gaps = 46/336 (13%)
Query: 97 MLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC--- 153
M N+ P S+N++ L + ++F + S + P L+T+ +++ FC
Sbjct: 172 MRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVN 231
Query: 154 --------------------------------KMGRVSHGFVVLGRILRSCFTPDAVAFT 181
K RV+ +L + PDA F
Sbjct: 232 EIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFN 291
Query: 182 SLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANG 241
+I GLC RI EAA + ++ G P+ ITY L+NGLC+ G A +LF +
Sbjct: 292 DVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP-- 349
Query: 242 NGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQM-KDKNINPDVVTYNSLIHGFCY 300
KP V + T+I G G +D AK + M I PDV TYNSLI+G+
Sbjct: 350 --------KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401
Query: 301 ANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTST 360
A +L +M ++G +P+V ++ +++D CK GK+DEA +L M G+ PNT
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461
Query: 361 FSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
F+ L+ FC R+ A E+F M GCK V+++
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTF 497
Score = 147 bits (372), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 142/279 (50%), Gaps = 9/279 (3%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+EA+ + + M + P FN L K + +F+ + G PD+YT+N
Sbjct: 441 DEAYNVLNEM-SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 499
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
LI+ C++ + H +L ++ + V + +LI I EA L ++ G
Sbjct: 500 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 559
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEM-ANGNGKFGVVCKPNTVTYTTIIDGLCKE 266
+ ITY++LI GLCR G A +LFE+M +G+ P+ ++ +I+GLC+
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHA-------PSNISCNILINGLCRS 612
Query: 267 GFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTF 326
G V++A E +M + PD+VT+NSLI+G C A + + ++ +G+ PD VTF
Sbjct: 613 GMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTF 672
Query: 327 NVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLM 365
N +M LCK G + +A LL+ I G PN T+S L+
Sbjct: 673 NTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 126/253 (49%), Gaps = 7/253 (2%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA IF M + P + +FN L L + L L + + S G+ + TYN L
Sbjct: 477 EAVEIFREMPR-KGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGC 208
IN F + G + ++ ++ D + + SLIKGLC + +A +LF K+ G
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 209 KPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGF 268
P+ I+ + LINGLCR+G A+ +EM P+ VT+ ++I+GLC+ G
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST------PDIVTFNSLINGLCRAGR 649
Query: 269 VDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNV 328
++ +F +++ + I PD VT+N+L+ C +A LL E ++ G P+ T+++
Sbjct: 650 IEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSI 709
Query: 329 IMDELCKNGKMDE 341
++ + +D
Sbjct: 710 LLQSIIPQETLDR 722
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 6/171 (3%)
Query: 103 SPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 162
SP ++N L L + D SLF+++ G P + NILIN C+ G V
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAV 619
Query: 163 VVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGL 222
++ TPD V F SLI GLC RI + +F KL+A G P+ +T++TL++ L
Sbjct: 620 EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWL 679
Query: 223 CRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 273
C+ G A L +E G V PN T++ ++ + + +D+ +
Sbjct: 680 CKGGFVYDACLLLDEGIED----GFV--PNHRTWSILLQSIIPQETLDRRR 724
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 60/171 (35%), Gaps = 36/171 (21%)
Query: 255 TYTTIIDGLCKEGFVDKAKELFLQMKDKNI------------------------------ 284
Y +I L G L +QMKD+ I
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 285 ------NPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGK 338
P +YN ++ N A + +M+ + + P + TF V+M C +
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 339 MDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGC 389
+D A LL M G PN+ + TL+ RVN A +L M MGC
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 283
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 176 bits (447), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 157/307 (51%), Gaps = 11/307 (3%)
Query: 94 FDYM----LNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILI 149
+DY+ +NM SP L SFNL+ L K + D + +F+ + PD YTY L+
Sbjct: 171 YDYVVNSNMNMNISPNGL-SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLM 229
Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCK 209
+ CK R+ ++L + +P V + LI GLC + + L + GC
Sbjct: 230 DGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCV 289
Query: 210 PNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFV 269
PN +TY+TLI+GLC G A++L E M + C PN VTY T+I+GL K+
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK------CIPNDVTYGTLINGLVKQRRA 343
Query: 270 DKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVI 329
A L M+++ + + Y+ LI G EA L +M ++G +P++V ++V+
Sbjct: 344 TDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVL 403
Query: 330 MDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGC 389
+D LC+ GK +EA +L MI G PN T+S+LM GF TG A +++ M+ GC
Sbjct: 404 VDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGC 463
Query: 390 KHTVFSY 396
F Y
Sbjct: 464 SRNKFCY 470
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 169/345 (48%), Gaps = 16/345 (4%)
Query: 57 RLTVKDRASLEQFLKERCKSSGQGDITAITPNEAFCIFDYMLNMRPSPPPLTSFNLLFGC 116
R+ +++R +E+ ++ G+ + P++A +F M++ + SFN +
Sbjct: 102 RIRLENRVIIERSFIVVFRAYGKAHL----PDKAVDLFHRMVDEFRCKRSVKSFNSVLNV 157
Query: 117 LAKTKHYDTVLSLFKRLNSTGL----FPDLYTYNILINCFCKMGRVSHGFVVL-GRILRS 171
+ Y L + + ++ + P+ ++N++I CK+ V V G R
Sbjct: 158 IINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERK 217
Query: 172 CFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVA 231
C PD + +L+ GLC E RI EA L ++++ GC P+ + Y+ LI+GLC+ G
Sbjct: 218 CL-PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRV 276
Query: 232 LNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTY 291
L + M F C PN VTY T+I GLC +G +DKA L +M P+ VTY
Sbjct: 277 TKLVDNM------FLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTY 330
Query: 292 NSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMIL 351
+LI+G +A LL M ++G + ++V++ L K GK +EA L M
Sbjct: 331 GTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAE 390
Query: 352 RGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
+G PN +S L+DG C G+ N AKE+ M + GC ++Y
Sbjct: 391 KGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTY 435
Score = 152 bits (383), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 152/297 (51%), Gaps = 7/297 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+EA + D M + SP P+ +N+L L K V L + G P+ TYN
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVI-YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNT 297
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
LI+ C G++ +L R++ S P+ V + +LI GL + R +A L + ++ G
Sbjct: 298 LIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERG 357
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
N YS LI+GL + G A++L+ +MA CKPN V Y+ ++DGLC+EG
Sbjct: 358 YHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG------CKPNIVVYSVLVDGLCREG 411
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
++AKE+ +M P+ TY+SL+ GF EA + EM G + ++
Sbjct: 412 KPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYS 471
Query: 328 VIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSM 384
V++D LC G++ EA + M+ G+ P+T +S+++ G C G ++ A +L+ M
Sbjct: 472 VLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEM 528
Score = 149 bits (377), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 157/321 (48%), Gaps = 17/321 (5%)
Query: 79 QGDITAITPNEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGL 138
+GD+T +T + D M ++ P ++N L L D +SL +R+ S+
Sbjct: 270 KGDLTRVTK-----LVDNMF-LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKC 323
Query: 139 FPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAA 198
P+ TY LIN K R + +L + + + ++ LI GL E + EA +
Sbjct: 324 IPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMS 383
Query: 199 LFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEM-ANGNGKFGVVCKPNTVTYT 257
L+ K+ GCKPN++ YS L++GLCR G A + M A+G C PN TY+
Sbjct: 384 LWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG-------CLPNAYTYS 436
Query: 258 TIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQ 317
+++ G K G ++A +++ +M + + Y+ LI G C EA + +M+
Sbjct: 437 SLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTI 496
Query: 318 GVQPDVVTFNVIMDELCKNGKMDEASRLLELMILR---GVNPNTSTFSTLMDGFCLTGRV 374
G++PD V ++ I+ LC G MD A +L M+ + P+ T++ L+DG C+ +
Sbjct: 497 GIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDI 556
Query: 375 NHAKELFVSMESMGCKHTVFS 395
+ A +L SM GC V +
Sbjct: 557 SRAVDLLNSMLDRGCDPDVIT 577
Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 149/292 (51%), Gaps = 30/292 (10%)
Query: 110 FNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 169
+++L L K + +SL++++ G P++ Y++L++ C+ G+ + +L R++
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 170 RSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTI 229
S P+A ++SL+KG EA ++ ++ GC N YS LI+GLC G
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 230 VALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQM---KDKNINP 286
A+ ++ +M + KP+TV Y++II GLC G +D A +L+ +M ++ P
Sbjct: 485 EAMMVWSKM------LTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538
Query: 287 DVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMD--------------- 331
DVVTYN L+ G C D + A LL M+D+G PDV+T N ++
Sbjct: 539 DVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSF 598
Query: 332 ------ELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHA 377
L K ++ A ++E+M+ + + P TST++ ++ C ++N A
Sbjct: 599 LEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAA 650
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 176 bits (445), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 170/356 (47%), Gaps = 75/356 (21%)
Query: 110 FNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 169
+N L LA+ D + ++ + + P++YTYN ++N +CK+G V + +I+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 170 RSCFTPD-----------------------------------AVAFTSLIKGLCAESRIM 194
+ PD VA+T LI GLC RI
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 195 EAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTV 254
EA LF K+K C P V TY+ LI LC + ALNL +EM + G+ KPN
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME----ETGI--KPNIH 359
Query: 255 TYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCY-------------- 300
TYT +ID LC + +KA+EL QM +K + P+V+TYN+LI+G+C
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 301 --------ANDWNE------------ANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMD 340
+NE A +L +M+++ V PDVVT+N ++D C++G D
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479
Query: 341 EASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
A RLL LM RG+ P+ T+++++D C + RV A +LF S+E G V Y
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 535
Score = 167 bits (424), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 158/292 (54%), Gaps = 7/292 (2%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P + ++ +L L ++ L ++ GL P++ TYN LIN +CK G + V
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415
Query: 165 LGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCR 224
+ + +P+ + LIKG C +S + +A + K+ P+V+TY++LI+G CR
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474
Query: 225 TGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNI 284
+G+ A L M + G+V P+ TYT++ID LCK V++A +LF ++ K +
Sbjct: 475 SGNFDSAYRLLSLMNDR----GLV--PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Query: 285 NPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASR 344
NP+VV Y +LI G+C A +EA+ +L +M+ + P+ +TFN ++ LC +GK+ EA+
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588
Query: 345 LLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
L E M+ G+ P ST + L+ G +HA F M S G K +Y
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY 640
Score = 159 bits (402), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 145/292 (49%), Gaps = 7/292 (2%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P + ++N L K + + + + + S L P+ TYN LI +CK V V
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGV 449
Query: 165 LGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCR 224
L ++L PD V + SLI G C A L + + G P+ TY+++I+ LC+
Sbjct: 450 LNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK 509
Query: 225 TGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNI 284
+ A +LF+ + GV PN V YT +IDG CK G VD+A + +M KN
Sbjct: 510 SKRVEEACDLFDSLEQK----GV--NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563
Query: 285 NPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASR 344
P+ +T+N+LIHG C EA L +M+ G+QP V T +++ L K+G D A
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623
Query: 345 LLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
+ M+ G P+ T++T + +C GR+ A+++ M G +F+Y
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY 675
Score = 151 bits (382), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 150/310 (48%), Gaps = 11/310 (3%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
+A + + M + + SP T L+ G H + + ++ + PD+ TYN L
Sbjct: 411 DAVDVVELMESRKLSPNTRTYNELIKGYCKSNVH--KAMGVLNKMLERKVLPDVVTYNSL 468
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGC 208
I+ C+ G + +L + PD +TS+I LC R+ EA LF L+ G
Sbjct: 469 IDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Query: 209 KPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGF 268
PNV+ Y+ LI+G C+ G A + E+M + N C PN++T+ +I GLC +G
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN------CLPNSLTFNALIHGLCADGK 582
Query: 269 VDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNV 328
+ +A L +M + P V T LIH D++ A +M+ G +PD T+
Sbjct: 583 LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTT 642
Query: 329 IMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMG 388
+ C+ G++ +A ++ M GV+P+ T+S+L+ G+ G+ N A ++ M G
Sbjct: 643 FIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702
Query: 389 C---KHTVFS 395
C +HT S
Sbjct: 703 CEPSQHTFLS 712
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 133/266 (50%), Gaps = 11/266 (4%)
Query: 126 VLSLFKRLNSTGLFPDLYT-----YNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAF 180
VL L +++N F Y YN L+N + G V V +L P+ +
Sbjct: 162 VLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTY 221
Query: 181 TSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMAN 240
++ G C + EA +K+ G P+ TY++LI G C+ A +F EM
Sbjct: 222 NKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPL 281
Query: 241 GNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCY 300
C+ N V YT +I GLC +D+A +LF++MKD P V TY LI C
Sbjct: 282 KG------CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335
Query: 301 ANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTST 360
+ +EA L+ EM + G++P++ T+ V++D LC K ++A LL M+ +G+ PN T
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 361 FSTLMDGFCLTGRVNHAKELFVSMES 386
++ L++G+C G + A ++ MES
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMES 421
Score = 135 bits (339), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 153/322 (47%), Gaps = 17/322 (5%)
Query: 44 SDPTTTAKLKESLRLTVKDRASLEQFLKERCKSSGQGDITAITPNEAFCIFDYMLNMRPS 103
D +L ES +L+ R + + +K CKS+ ++A + + ML R
Sbjct: 410 EDAVDVVELMESRKLSPNTR-TYNELIKGYCKSN---------VHKAMGVLNKMLE-RKV 458
Query: 104 PPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 163
P + ++N L ++ ++D+ L +N GL PD +TY +I+ CK RV
Sbjct: 459 LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD 518
Query: 164 VLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLC 223
+ + + P+ V +T+LI G C ++ EA + K+ + C PN +T++ LI+GLC
Sbjct: 519 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Query: 224 RTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKN 283
G A L E+M K G+ +P T T +I L K+G D A F QM
Sbjct: 579 ADGKLKEATLLEEKMV----KIGL--QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 284 INPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEAS 343
PD TY + I +C +A ++ +M + GV PD+ T++ ++ G+ + A
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAF 692
Query: 344 RLLELMILRGVNPNTSTFSTLM 365
+L+ M G P+ TF +L+
Sbjct: 693 DVLKRMRDTGCEPSQHTFLSLI 714
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 147/305 (48%), Gaps = 13/305 (4%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P +++ +L L K +D S F+++ S+G PD +TY I +C+ GR+ +
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDM 659
Query: 165 LGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCR 224
+ ++ + +PD ++SLIKG + A + +++ GC+P+ T+ +LI L
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE 719
Query: 225 TGHTIVALNLFEEMANGN-GKFGVVCK-----------PNTVTYTTIIDGLCKEGFVDKA 272
+ + E A N +F V + PN +Y +I G+C+ G + A
Sbjct: 720 MKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVA 779
Query: 273 KELFLQM-KDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMD 331
+++F M +++ I+P + +N+L+ C NEA ++ +M+ G P + + V++
Sbjct: 780 EKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLIC 839
Query: 332 ELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKH 391
L K G+ + + + + ++ G + + ++DG G V ELF ME GCK
Sbjct: 840 GLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKF 899
Query: 392 TVFSY 396
+ +Y
Sbjct: 900 SSQTY 904
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 96/172 (55%), Gaps = 1/172 (0%)
Query: 225 TGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNI 284
G + L+L +M N + +F + K Y T+++ L + G VD+ K+++++M + +
Sbjct: 156 VGDALYVLDLCRKM-NKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKV 214
Query: 285 NPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASR 344
P++ TYN +++G+C + EAN + ++++ G+ PD T+ ++ C+ +D A +
Sbjct: 215 CPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFK 274
Query: 345 LLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
+ M L+G N ++ L+ G C+ R++ A +LFV M+ C TV +Y
Sbjct: 275 VFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTY 326
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 148/363 (40%), Gaps = 84/363 (23%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+EA + + ML+ P LT L+ G A K + L L +++ GL P + T I
Sbjct: 549 DEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL-LEEKMVKIGLQPTVSTDTI 607
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
LI+ K G H + ++L S PDA +T+ I+ C E R+++A + K++ G
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFE----------------------EMANGNGK- 244
P++ TYS+LI G G T A ++ + EM G K
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKG 727
Query: 245 -------------FGVVCK-----------PNTVTYTTIIDGLCKEGFVDKAKELFLQM- 279
F V + PN +Y +I G+C+ G + A+++F M
Sbjct: 728 SEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQ 787
Query: 280 KDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQP------------------ 321
+++ I+P + +N+L+ C NEA ++ +M+ G P
Sbjct: 788 RNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEK 847
Query: 322 -----------------DVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTL 364
D + + +I+D + K G ++ L +M G ++ T+S L
Sbjct: 848 ERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLL 907
Query: 365 MDG 367
++G
Sbjct: 908 IEG 910
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 171 bits (434), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 148/288 (51%), Gaps = 41/288 (14%)
Query: 129 LFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLC 188
+F+ + G+ P+LYTY+ +I+ +CK G V + + IL + P+ V F +L+ G C
Sbjct: 256 MFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFC 315
Query: 189 AESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVV 248
++ A +LF + FG PN+ Y+ LI+G C++G+ + A+ L EM + N
Sbjct: 316 KARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN------ 369
Query: 249 CKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEAN 308
P+ TYT +I+GLC E V +A LF +MK++ I P TYNSLIHG+C + +A
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429
Query: 309 CLLIEMMDQGVQPDVVTFNVIMDELC---------------------------------- 334
L EM GV+P+++TF+ ++D C
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAH 489
Query: 335 -KNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELF 381
K M EA RL M+ G++PN TF+ L+DGF GR++ A + +
Sbjct: 490 FKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFY 537
Score = 159 bits (402), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 158/297 (53%), Gaps = 7/297 (2%)
Query: 100 MRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS 159
M+ SP ++L G L + + +D+V ++ + S GL PD++ Y +L C K G S
Sbjct: 158 MKCSPDSKACLSILNG-LVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYS 216
Query: 160 HGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLI 219
+L + P+ +T I LC ++++ EA +F +K G PN+ TYS +I
Sbjct: 217 KKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMI 276
Query: 220 NGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQM 279
+G C+TG+ A L++E+ PN V + T++DG CK + A+ LF+ M
Sbjct: 277 DGYCKTGNVRQAYGLYKEILVAE------LLPNVVVFGTLVDGFCKARELVTARSLFVHM 330
Query: 280 KDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKM 339
++P++ YN LIHG C + + EA LL EM + PDV T+ ++++ LC ++
Sbjct: 331 VKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQV 390
Query: 340 DEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
EA+RL + M + P+++T+++L+ G+C + A +L M + G + + ++
Sbjct: 391 AEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITF 447
Score = 131 bits (330), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 139/305 (45%), Gaps = 41/305 (13%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P + F L K + T SLF + G+ P+LY YN LI+ CK G + +
Sbjct: 302 PNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGL 361
Query: 165 LGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCR 224
L + +PD +T LI GLC E ++ EA LF K+K P+ TY++LI+G C+
Sbjct: 362 LSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCK 421
Query: 225 TGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNI 284
+ AL+L EM GV +PN +T++T+IDG C + A L+ +M K I
Sbjct: 422 EYNMEQALDLCSEMTAS----GV--EPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGI 475
Query: 285 NPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDE------------ 332
PDVVTY +LI + EA L +M++ G+ P+ TF ++D
Sbjct: 476 VPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAID 535
Query: 333 -----------------------LCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFC 369
LC+NG + ASR M G+ P+ ++ +++ G
Sbjct: 536 FYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHL 595
Query: 370 LTGRV 374
R+
Sbjct: 596 QEKRI 600
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 121/254 (47%), Gaps = 7/254 (2%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA +F M N R P T +L+ G K + + L L + ++G+ P++ T++ L
Sbjct: 392 EANRLFQKMKNERIFPSSATYNSLIHG-YCKEYNMEQALDLCSEMTASGVEPNIITFSTL 450
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGC 208
I+ +C + + + + PD V +T+LI E+ + EA L++ + G
Sbjct: 451 IDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGI 510
Query: 209 KPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGF 268
PN T++ L++G + G VA++ ++E + N V +T +I+GLC+ G+
Sbjct: 511 HPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCW------NHVGFTCLIEGLCQNGY 564
Query: 269 VDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNV 328
+ +A F M+ I PD+ +Y S++ G + L +M+ G+ P+++ +
Sbjct: 565 ILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQL 624
Query: 329 IMDELCKNGKMDEA 342
+ NG + A
Sbjct: 625 LARFYQANGYVKSA 638
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 124/302 (41%), Gaps = 29/302 (9%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P L +N L K+ + + L + S L PD++TY ILIN C +V+ +
Sbjct: 337 PNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRL 396
Query: 165 LGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCR 224
++ P + + SLI G C E + +A L +++ A G +PN+IT+STLI+G C
Sbjct: 397 FQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCN 456
Query: 225 TGHTIVALNLFEEMA--------------------NGNGKFGVV---------CKPNTVT 255
A+ L+ EM N K + PN T
Sbjct: 457 VRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHT 516
Query: 256 YTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMM 315
+ ++DG KEG + A + + + + + V + LI G C A+ +M
Sbjct: 517 FACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMR 576
Query: 316 DQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVN 375
G+ PD+ ++ ++ + ++ + L MI G+ PN L + G V
Sbjct: 577 SCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVK 636
Query: 376 HA 377
A
Sbjct: 637 SA 638
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/316 (33%), Positives = 158/316 (50%), Gaps = 19/316 (6%)
Query: 85 ITPNEAFCIFDYMLNMRPS--PPPLTSFNLLFGCLAKTKH-YDTVLSLFKRLNSTGLFPD 141
+ N+ F + NMR PP + S N+L L + D L +F + G PD
Sbjct: 132 VEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPD 191
Query: 142 LYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFT 201
YTY LI+ C+ GR+ + ++ P V +TSLI GLC + EA
Sbjct: 192 SYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLE 251
Query: 202 KLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFE-EMANGNGKFGVVCKPNTVTYTTII 260
++K+ G +PNV TYS+L++GLC+ G ++ A+ LFE MA G C+PN VTYTT+I
Sbjct: 252 EMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARG-------CRPNMVTYTTLI 304
Query: 261 DGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQ 320
GLCKE + +A EL +M + + PD Y +I GFC + + EA L EM+ G+
Sbjct: 305 TGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGIT 364
Query: 321 PDVVTFNV-------IMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGR 373
P+ +T+N+ ++ LC N A L M RG++ T +L+ C G
Sbjct: 365 PNRLTWNIHVKTSNEVVRGLCANYP-SRAFTLYLSMRSRGISVEVETLESLVKCLCKKGE 423
Query: 374 VNHAKELFVSMESMGC 389
A +L + + GC
Sbjct: 424 FQKAVQLVDEIVTDGC 439
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 165/341 (48%), Gaps = 20/341 (5%)
Query: 56 LRLTVKDRASLEQFLKERCKSSGQGDITAITPNEAFCIFDYMLNMRPSPPPLTSFNLLFG 115
+R+ +++ E L C+ G+ P ++ +F M + P ++ +
Sbjct: 75 VRMKIENCVVSEDILLSICRGYGR----VHRPFDSLRVFHKMKDF-DCDPSQKAYVTVLA 129
Query: 116 CLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKM-GRVSHGFVVLGRILRSCFT 174
L + + +K + GL P + + N+LI C+ G V G + + +
Sbjct: 130 ILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCD 189
Query: 175 PDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNL 234
PD+ + +LI GLC RI EA LFT++ C P V+TY++LINGLC + + A+
Sbjct: 190 PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRY 249
Query: 235 FEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSL 294
EEM + +PN TY++++DGLCK+G +A ELF M + P++VTY +L
Sbjct: 250 LEEMKSKG------IEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTL 303
Query: 295 IHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGV 354
I G C EA LL M QG++PD + ++ C K EA+ L+ MIL G+
Sbjct: 304 ITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGI 363
Query: 355 NPNTSTF-------STLMDGFCLTGRVNHAKELFVSMESMG 388
PN T+ + ++ G C + A L++SM S G
Sbjct: 364 TPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSRG 403
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 125/217 (57%), Gaps = 7/217 (3%)
Query: 175 PDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVA-LN 233
P A+ +++ L E+++ A + ++ G P V + + LI LCR T+ A L
Sbjct: 119 PSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLK 178
Query: 234 LFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNS 293
+F EM C P++ TY T+I GLC+ G +D+AK+LF +M +K+ P VVTY S
Sbjct: 179 IFLEMPKRG------CDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTS 232
Query: 294 LIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRG 353
LI+G C + + +EA L EM +G++P+V T++ +MD LCK+G+ +A L E+M+ RG
Sbjct: 233 LINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARG 292
Query: 354 VNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCK 390
PN T++TL+ G C ++ A EL M G K
Sbjct: 293 CRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLK 329
Score = 125 bits (313), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 111/216 (51%), Gaps = 7/216 (3%)
Query: 182 SLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANG 241
S+ +G R ++ +F K+K F C P+ Y T++ L +A ++ M
Sbjct: 91 SICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMRE- 149
Query: 242 NGKFGVVCKPNTVTYTTIIDGLCK-EGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCY 300
+ P + +I LC+ +G VD ++FL+M + +PD TY +LI G C
Sbjct: 150 -----IGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCR 204
Query: 301 ANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTST 360
+EA L EM+++ P VVT+ +++ LC + +DEA R LE M +G+ PN T
Sbjct: 205 FGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFT 264
Query: 361 FSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
+S+LMDG C GR A ELF M + GC+ + +Y
Sbjct: 265 YSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTY 300
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 129/266 (48%), Gaps = 15/266 (5%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+EA +F M+ +P +T +L+ G L +K+ D + + + S G+ P+++TY+
Sbjct: 209 DEAKKLFTEMVEKDCAPTVVTYTSLING-LCGSKNVDEAMRYLEEMKSKGIEPNVFTYSS 267
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
L++ CK GR + ++ P+ V +T+LI GLC E +I EA L ++ G
Sbjct: 268 LMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQG 327
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTT-------II 260
KP+ Y +I+G C A N +EM G G+ PN +T+ ++
Sbjct: 328 LKPDAGLYGKVISGFCAISKFREAANFLDEMILG----GIT--PNRLTWNIHVKTSNEVV 381
Query: 261 DGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQ 320
GLC + +A L+L M+ + I+ +V T SL+ C ++ +A L+ E++ G
Sbjct: 382 RGLCA-NYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCI 440
Query: 321 PDVVTFNVIMDELCKNGKMDEASRLL 346
P T+ +++ + EAS L
Sbjct: 441 PSKGTWKLLIGHTLDKTIVGEASDTL 466
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 154/309 (49%), Gaps = 7/309 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
EA F M R P S N L AK D V FK + G P ++TYNI
Sbjct: 209 EEAIQCFSKMKRFRVFPKT-RSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNI 267
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
+I+C CK G V + + PD V + S+I G R+ + F ++K
Sbjct: 268 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 327
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
C+P+VITY+ LIN C+ G + L + EM GNG KPN V+Y+T++D CKEG
Sbjct: 328 CEPDVITYNALINCFCKFGKLPIGLEFYREM-KGNG-----LKPNVVSYSTLVDAFCKEG 381
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
+ +A + ++ M+ + P+ TY SLI C + ++A L EM+ GV+ +VVT+
Sbjct: 382 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYT 441
Query: 328 VIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESM 387
++D LC +M EA L M GV PN ++++ L+ GF ++ A EL ++
Sbjct: 442 ALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 501
Query: 388 GCKHTVFSY 396
G K + Y
Sbjct: 502 GIKPDLLLY 510
Score = 160 bits (405), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 160/318 (50%), Gaps = 12/318 (3%)
Query: 79 QGDITAITPNEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGL 138
+GD+ A A +F+ M R P ++N + K D + F+ +
Sbjct: 275 EGDVEA-----ARGLFEEM-KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCC 328
Query: 139 FPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAA 198
PD+ TYN LINCFCK G++ G + + P+ V++++L+ C E + +A
Sbjct: 329 EPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK 388
Query: 199 LFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTT 258
+ ++ G PN TY++LI+ C+ G NL + GN V + N VTYT
Sbjct: 389 FYVDMRRVGLVPNEYTYTSLIDANCKIG------NLSDAFRLGNEMLQVGVEWNVVTYTA 442
Query: 259 IIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQG 318
+IDGLC + +A+ELF +M + P++ +YN+LIHGF A + + A LL E+ +G
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 502
Query: 319 VQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAK 378
++PD++ + + LC K++ A ++ M G+ N+ ++TLMD + +G
Sbjct: 503 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 562
Query: 379 ELFVSMESMGCKHTVFSY 396
L M+ + + TV ++
Sbjct: 563 HLLDEMKELDIEVTVVTF 580
Score = 141 bits (356), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 149/305 (48%), Gaps = 7/305 (2%)
Query: 93 IFDYMLNMRPS-PPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 151
+FD + + R P F+ LF L + + F ++ +FP + N L++
Sbjct: 177 VFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHR 236
Query: 152 FCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPN 211
F K+G+ ++ + P + +I +C E + A LF ++K G P+
Sbjct: 237 FAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPD 296
Query: 212 VITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDK 271
+TY+++I+G + G + FEEM + + C+P+ +TY +I+ CK G +
Sbjct: 297 TVTYNSMIDGFGKVGRLDDTVCFFEEMKD------MCCEPDVITYNALINCFCKFGKLPI 350
Query: 272 AKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMD 331
E + +MK + P+VV+Y++L+ FC +A ++M G+ P+ T+ ++D
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Query: 332 ELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKH 391
CK G + +A RL M+ GV N T++ L+DG C R+ A+ELF M++ G
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470
Query: 392 TVFSY 396
+ SY
Sbjct: 471 NLASY 475
Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 149/328 (45%), Gaps = 42/328 (12%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P + S++ L K + + + GL P+ YTY LI+ CK+G +S F +
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 165 LGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCR 224
+L+ + V +T+LI GLC R+ EA LF K+ G PN+ +Y+ LI+G +
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 225 TGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNI 284
+ AL L E+ G G KP+ + Y T I GLC ++ AK + +MK+ I
Sbjct: 485 AKNMDRALELLNEL-KGRG-----IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 538
Query: 285 NPDVVTYNSLIHGFCYANDWNEANCLLIEMM----------------------------- 315
+ + Y +L+ + + + E LL EM
Sbjct: 539 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVD 598
Query: 316 -------DQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGF 368
D G+Q + F ++D LCK+ +++ A+ L E M+ +G+ P+ + +++LMDG
Sbjct: 599 YFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGN 658
Query: 369 CLTGRVNHAKELFVSMESMGCKHTVFSY 396
G V A L M +G K + +Y
Sbjct: 659 FKQGNVLEALALRDKMAEIGMKLDLLAY 686
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 136/291 (46%), Gaps = 9/291 (3%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P L S+N L K K+ D L L L G+ PDL Y I C + ++ VV
Sbjct: 470 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 529
Query: 165 LGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCR 224
+ + +++ +T+L+ E L ++K + V+T+ LI+GLC+
Sbjct: 530 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 589
Query: 225 TGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNI 284
A++ F ++N FG+ + N +T +IDGLCK+ V+ A LF QM K +
Sbjct: 590 NKLVSKAVDYFNRISN---DFGL--QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGL 644
Query: 285 NPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASR 344
PD Y SL+ G + EA L +M + G++ D++ + ++ L ++ +A
Sbjct: 645 VPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARS 704
Query: 345 LLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFS 395
LE MI G++P+ +++ G ++ A EL +S KH + +
Sbjct: 705 FLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL----QSYLMKHQLLT 751
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 133/283 (46%), Gaps = 7/283 (2%)
Query: 107 LTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 166
+ ++ L L + LF ++++ G+ P+L +YN LI+ F K + +L
Sbjct: 437 VVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLN 496
Query: 167 RILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTG 226
+ PD + + + I GLC+ +I A + ++K G K N + Y+TL++ ++G
Sbjct: 497 ELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSG 556
Query: 227 HTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQM-KDKNIN 285
+ L+L +EM + + VV T+ +IDGLCK V KA + F ++ D +
Sbjct: 557 NPTEGLHLLDEMKELDIEVTVV------TFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQ 610
Query: 286 PDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRL 345
+ + ++I G C N A L +M+ +G+ PD + +MD K G + EA L
Sbjct: 611 ANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALAL 670
Query: 346 LELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMG 388
+ M G+ + +++L+ G ++ A+ M G
Sbjct: 671 RDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEG 713
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 168 bits (425), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 154/288 (53%), Gaps = 6/288 (2%)
Query: 109 SFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 168
++ +L L K +++++ G+FP+LYTYN ++N CK GR F V +
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 169 LRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHT 228
+ + V + +LI GLC E ++ EA + ++K+ G PN+ITY+TLI+G C G
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL 354
Query: 229 IVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDV 288
AL+L ++ + P+ VTY ++ G C++G A ++ +M+++ I P
Sbjct: 355 GKALSLCRDLKSRG------LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSK 408
Query: 289 VTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLEL 348
VTY LI F +++ +A L + M + G+ PDV T++V++ C G+M+EASRL +
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468
Query: 349 MILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
M+ + PN ++T++ G+C G A +L ME V SY
Sbjct: 469 MVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASY 516
Score = 165 bits (417), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 157/292 (53%), Gaps = 7/292 (2%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P FN L + + ++ S F N + + D+Y++ ILI C+ G + F +
Sbjct: 127 PGSNCFNYLLTFVVGSSSFNQWWSFFNE-NKSKVVLDVYSFGILIKGCCEAGEIEKSFDL 185
Query: 165 LGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCR 224
L + F+P+ V +T+LI G C + I +A LF ++ G N TY+ LINGL +
Sbjct: 186 LIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFK 245
Query: 225 TGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNI 284
G ++E+M +G F PN TY +++ LCK+G A ++F +M+++ +
Sbjct: 246 NGVKKQGFEMYEKMQE-DGVF-----PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGV 299
Query: 285 NPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASR 344
+ ++VTYN+LI G C NEAN ++ +M G+ P+++T+N ++D C GK+ +A
Sbjct: 300 SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359
Query: 345 LLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
L + RG++P+ T++ L+ GFC G + A ++ ME G K + +Y
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411
Score = 159 bits (402), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 154/300 (51%), Gaps = 10/300 (3%)
Query: 94 FDYMLNMRP---SPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 150
FD ++ + SP + L+ GC K + LF + GL + TY +LIN
Sbjct: 183 FDLLIELTEFGFSPNVVIYTTLIDGC-CKKGEIEKAKDLFFEMGKLGLVANERTYTVLIN 241
Query: 151 CFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKP 210
K G GF + ++ P+ + ++ LC + R +A +F +++ G
Sbjct: 242 GLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSC 301
Query: 211 NVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVD 270
N++TY+TLI GLCR A + ++M + PN +TY T+IDG C G +
Sbjct: 302 NIVTYNTLIGGLCREMKLNEANKVVDQMKSDG------INPNLITYNTLIDGFCGVGKLG 355
Query: 271 KAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIM 330
KA L +K + ++P +VTYN L+ GFC D + A ++ EM ++G++P VT+ +++
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415
Query: 331 DELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCK 390
D ++ M++A +L M G+ P+ T+S L+ GFC+ G++N A LF SM C+
Sbjct: 416 DTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCE 475
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 146/276 (52%), Gaps = 7/276 (2%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
+AF +FD M R + ++N L G L + + + ++ S G+ P+L TYN L
Sbjct: 286 DAFQVFDEMRE-RGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTL 344
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGC 208
I+ FC +G++ + + +P V + L+ G C + AA + +++ G
Sbjct: 345 IDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI 404
Query: 209 KPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGF 268
KP+ +TY+ LI+ R+ + A+ L M + G+V P+ TY+ +I G C +G
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRLSME----ELGLV--PDVHTYSVLIHGFCIKGQ 458
Query: 269 VDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNV 328
+++A LF M +KN P+ V YN++I G+C A LL EM ++ + P+V ++
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRY 518
Query: 329 IMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTL 364
+++ LCK K EA RL+E MI G++P+TS S +
Sbjct: 519 MIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 166 bits (419), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 149/308 (48%), Gaps = 9/308 (2%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
+A +FD M P S+++L L + + L ++ G P TY +L
Sbjct: 248 DALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVL 307
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGC 208
I C G + F + ++ P+ +T LI GLC + +I EA + K+
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367
Query: 209 KPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGF 268
P+VITY+ LING C+ G + A L M CKPN T+ +++GLC+ G
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVMEKR------ACKPNVRTFNELMEGLCRVGK 421
Query: 269 VDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNV 328
KA L +M D ++PD+V+YN LI G C N A LL M ++PD +TF
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTA 481
Query: 329 IMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHA---KELFVSME 385
I++ CK GK D AS L LM+ +G++ + T +TL+DG C G+ A E V M
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMR 541
Query: 386 SMGCKHTV 393
+ H++
Sbjct: 542 ILTTPHSL 549
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 137/268 (51%), Gaps = 7/268 (2%)
Query: 130 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCA 189
++R+ + G + Y ++N CK G + + +IL+ F D+ TSL+ G C
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCR 242
Query: 190 ESRIMEAAALFTKL-KAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVV 248
+ +A +F + K C PN ++YS LI+GLC G A L ++M G+ G
Sbjct: 243 GLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQM----GEKG-- 296
Query: 249 CKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEAN 308
C+P+T TYT +I LC G +DKA LF +M + P+V TY LI G C EAN
Sbjct: 297 CQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEAN 356
Query: 309 CLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGF 368
+ +M+ + P V+T+N +++ CK+G++ A LL +M R PN TF+ LM+G
Sbjct: 357 GVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGL 416
Query: 369 CLTGRVNHAKELFVSMESMGCKHTVFSY 396
C G+ A L M G + SY
Sbjct: 417 CRVGKPYKAVHLLKRMLDNGLSPDIVSY 444
Score = 152 bits (383), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 166/344 (48%), Gaps = 42/344 (12%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
EAF + D M + P ++ +L L D +LF + G P+++TY +
Sbjct: 283 EEAFGLKDQM-GEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTV 341
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
LI+ C+ G++ V ++++ P + + +LI G C + R++ A L T ++
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA 401
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
CKPNV T++ L+ GLCR G A++L + M + NG P+ V+Y +IDGLC+EG
Sbjct: 402 CKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLD-NG-----LSPDIVSYNVLIDGLCREG 455
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
++ A +L M +I PD +T+ ++I+ FC + A+ L M+ +G+ D VT
Sbjct: 456 HMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGT 515
Query: 328 VIMDELCKNGKMDEASRLLELMI-LR---------------------------------- 352
++D +CK GK +A +LE ++ +R
Sbjct: 516 TLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKL 575
Query: 353 GVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
G+ P+ T++TL+DG +G + + + M+ GC V+ Y
Sbjct: 576 GLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPY 619
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 164/344 (47%), Gaps = 42/344 (12%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
++AF +FD M+ R P + ++ +L L + + + +++ +FP + TYN
Sbjct: 318 DKAFNLFDEMIP-RGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNA 376
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
LIN +CK GRV F +L + + P+ F L++GLC + +A L ++ G
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
P++++Y+ LI+GLCR GH A L M F + +P+ +T+T II+ CK+G
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSM----NCFDI--EPDCLTFTAIINAFCKQG 490
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLL---------------- 311
D A M K I+ D VT +LI G C +A +L
Sbjct: 491 KADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLN 550
Query: 312 --IEMMDQGVQ-----------------PDVVTFNVIMDELCKNGKMDEASRLLELMILR 352
++M+ +G + P VVT+ ++D L ++G + + R+LELM L
Sbjct: 551 VILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLS 610
Query: 353 GVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
G PN ++ +++G C GRV A++L +M+ G +Y
Sbjct: 611 GCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTY 654
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 153/321 (47%), Gaps = 38/321 (11%)
Query: 97 MLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 156
++ R P + +FN L L + + L KR+ GL PD+ +YN+LI+ C+ G
Sbjct: 396 VMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREG 455
Query: 157 RVSHGFVVLGRILRSCF--TPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVIT 214
++ + +L + +CF PD + FT++I C + + A+A + G + +T
Sbjct: 456 HMNTAYKLLSSM--NCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVT 513
Query: 215 YSTLINGLCRTGHTIVALNLFE-------------------------------EMANGNG 243
+TLI+G+C+ G T AL + E M
Sbjct: 514 GTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKIN 573
Query: 244 KFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYAND 303
K G+V P+ VTYTT++DGL + G + + + MK P+V Y +I+G C
Sbjct: 574 KLGLV--PSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGR 631
Query: 304 WNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFST 363
EA LL M D GV P+ VT+ V++ NGK+D A + M+ RG N +S+
Sbjct: 632 VEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSS 691
Query: 364 LMDGFCLTGR-VNHAKELFVS 383
L+ GF L+ + +++++E VS
Sbjct: 692 LLQGFVLSQKGIDNSEESTVS 712
Score = 112 bits (279), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 122/252 (48%), Gaps = 40/252 (15%)
Query: 180 FTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIV--------- 230
++SL+ L A + +++A G +I Y T++N LC+ G+T
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 231 --------------------------ALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLC 264
AL +F+ M+ V C PN+V+Y+ +I GLC
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSK-----EVTCAPNSVSYSILIHGLC 277
Query: 265 KEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVV 324
+ G +++A L QM +K P TY LI C ++A L EM+ +G +P+V
Sbjct: 278 EVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVH 337
Query: 325 TFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSM 384
T+ V++D LC++GK++EA+ + M+ + P+ T++ L++G+C GRV A EL M
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397
Query: 385 ESMGCKHTVFSY 396
E CK V ++
Sbjct: 398 EKRACKPNVRTF 409
Score = 108 bits (271), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 155/373 (41%), Gaps = 100/373 (26%)
Query: 87 PNEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYN 146
P +A + ML+ SP + S+N+L L + H +T L +N + PD T+
Sbjct: 422 PYKAVHLLKRMLDNGLSPD-IVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFT 480
Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLC---------------AES 191
+IN FCK G+ LG +LR + D V T+LI G+C +
Sbjct: 481 AIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKM 540
Query: 192 RIM--------------------EAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVA 231
RI+ E A+ K+ G P+V+TY+TL++GL R+G +
Sbjct: 541 RILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGS 600
Query: 232 LNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTY 291
+ E M C PN YT II+GLC+ G V++A++L M+D ++P+ VTY
Sbjct: 601 FRILELMKLSG------CLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTY 654
Query: 292 -----------------------------------NSLIHGFCYANDW------------ 304
+SL+ GF +
Sbjct: 655 TVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDI 714
Query: 305 ----NEANCL--LIEMMDQ--GVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNP 356
+ C+ LI +++Q G + F ++ LCK G+ DE++ L++ ++ RGV
Sbjct: 715 ALRETDPECINELISVVEQLGGCISGLCIF--LVTRLCKEGRTDESNDLVQNVLERGVFL 772
Query: 357 NTSTFSTLMDGFC 369
+ +M+ +C
Sbjct: 773 EKA-MDIIMESYC 784
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 129/336 (38%), Gaps = 65/336 (19%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
+A I + ++ MR P S N++ L+K L++ ++N GL P + TY L
Sbjct: 529 DALFILETLVKMRILTTP-HSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTL 587
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGC 208
++ + G ++ F +L + S P+ +T +I GLC R+ EA L + ++ G
Sbjct: 588 VDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGV 647
Query: 209 KPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDG------ 262
PN +TY+ ++ G G AL M + N Y++++ G
Sbjct: 648 SPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYEL------NDRIYSSLLQGFVLSQK 701
Query: 263 -----------------------------------------------LCKEGFVDKAKEL 275
LCKEG D++ +L
Sbjct: 702 GIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDL 761
Query: 276 FLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCK 335
+ ++ + + + ++ +C + L+ ++ G P +F +++ L K
Sbjct: 762 VQNVLERGVFLEK-AMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKK 820
Query: 336 NGKMDEASRL-LELMILRGVNPNTSTFS---TLMDG 367
G + A L +EL+ GV + + LM+G
Sbjct: 821 EGDAERARELVMELLTSNGVVEKSGVLTYVECLMEG 856
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 153/327 (46%), Gaps = 43/327 (13%)
Query: 107 LTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 166
L ++ +L K D + K + GL DL Y LI FC G + G +
Sbjct: 212 LVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFD 271
Query: 167 RILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTG 226
+L +P A+ + +LI+G C ++ EA+ +F + G +PNV TY+ LI+GLC G
Sbjct: 272 EVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVG 331
Query: 227 HTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINP 286
T AL L M + +PN VTY II+ LCK+G V A E+ MK + P
Sbjct: 332 KTKEALQLLNLMIEKDE------EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385
Query: 287 DVVTYNSLIHGFCYANDWNEANCLLIEMMDQG--VQPDVVTFNVIMDELCKNGKMDEASR 344
D +TYN L+ G C D +EA+ LL M+ PDV+++N ++ LCK ++ +A
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445
Query: 345 LLELMILR--------------------GVNP---------------NTSTFSTLMDGFC 369
+ +L++ + VN N+ T++ ++DGFC
Sbjct: 446 IYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFC 505
Query: 370 LTGRVNHAKELFVSMESMGCKHTVFSY 396
TG +N AK L M + +VF Y
Sbjct: 506 KTGMLNVAKGLLCKMRVSELQPSVFDY 532
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 141/271 (52%), Gaps = 6/271 (2%)
Query: 111 NLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 170
N L L ++++++ S ++++ T F + + + L+ C+ +M + F VL +L+
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 171 SCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIV 230
F + L+KGLC +A +L +++ P+V +Y+T+I G C
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 231 ALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVT 290
AL L EM G+G C + VT+ +ID CK G +D+A +MK + D+V
Sbjct: 196 ALELANEM-KGSG-----CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVV 249
Query: 291 YNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMI 350
Y SLI GFC + + L E++++G P +T+N ++ CK G++ EAS + E MI
Sbjct: 250 YTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI 309
Query: 351 LRGVNPNTSTFSTLMDGFCLTGRVNHAKELF 381
RGV PN T++ L+DG C G+ A +L
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 150/292 (51%), Gaps = 9/292 (3%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P + S+N + + K + L L + +G L T+ ILI+ FCK G++
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234
Query: 165 LGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCR 224
L + D V +TSLI+G C + ALF ++ G P ITY+TLI G C+
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294
Query: 225 TGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNI 284
G A +FE M + GV +PN TYT +IDGLC G +A +L M +K+
Sbjct: 295 LGQLKEASEIFEFMI----ERGV--RPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE 348
Query: 285 NPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASR 344
P+ VTYN +I+ C +A ++ M + +PD +T+N+++ LC G +DEAS+
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASK 408
Query: 345 LLELMILRG--VNPNTSTFSTLMDGFCLTGRVNHAKELF-VSMESMGCKHTV 393
LL LM+ +P+ +++ L+ G C R++ A +++ + +E +G V
Sbjct: 409 LLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRV 460
Score = 146 bits (368), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 148/296 (50%), Gaps = 9/296 (3%)
Query: 90 AFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILI 149
AF + ML R + + N+L L + +SL + + L PD+++YN +I
Sbjct: 126 AFGVLALMLK-RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVI 184
Query: 150 NCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCK 209
FC+ + + + S + V + LI C ++ EA ++K G +
Sbjct: 185 RGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLE 244
Query: 210 PNVITYSTLINGLCRTGHTIVALNLFEE-MANGNGKFGVVCKPNTVTYTTIIDGLCKEGF 268
+++ Y++LI G C G LF+E + G+ P +TY T+I G CK G
Sbjct: 245 ADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDS-------PCAITYNTLIRGFCKLGQ 297
Query: 269 VDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNV 328
+ +A E+F M ++ + P+V TY LI G C EA LL M+++ +P+ VT+N+
Sbjct: 298 LKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNI 357
Query: 329 IMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSM 384
I+++LCK+G + +A ++ELM R P+ T++ L+ G C G ++ A +L M
Sbjct: 358 IINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 157/312 (50%), Gaps = 13/312 (4%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGC--LAKTKHYDTVLSLFKRLNSTGLFPDLYTYN 146
EA IF++M+ P T L+ G + KTK +L+L + P+ TYN
Sbjct: 300 EASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEE---PNAVTYN 356
Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAAL-FTKLKA 205
I+IN CK G V+ ++ + + PD + + L+ GLCA+ + EA+ L + LK
Sbjct: 357 IIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKD 416
Query: 206 FG-CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLC 264
P+VI+Y+ LI+GLC+ AL++++ + K G + VT +++
Sbjct: 417 SSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE---KLGA---GDRVTTNILLNSTL 470
Query: 265 KEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVV 324
K G V+KA EL+ Q+ D I + TY ++I GFC N A LL +M +QP V
Sbjct: 471 KAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVF 530
Query: 325 TFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSM 384
+N ++ LCK G +D+A RL E M P+ +F+ ++DG G + A+ L V M
Sbjct: 531 DYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM 590
Query: 385 ESMGCKHTVFSY 396
G +F+Y
Sbjct: 591 SRAGLSPDLFTY 602
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 143/278 (51%), Gaps = 6/278 (2%)
Query: 108 TSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGR 167
S + L C + + + + G ++Y +NIL+ C+ +L
Sbjct: 108 VSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLRE 167
Query: 168 ILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGH 227
+ R+ PD ++ ++I+G C + +A L ++K GC +++T+ LI+ C+ G
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227
Query: 228 TIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPD 287
A+ +EM KF + + + V YT++I G C G +D+ K LF ++ ++ +P
Sbjct: 228 MDEAMGFLKEM-----KF-MGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPC 281
Query: 288 VVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLE 347
+TYN+LI GFC EA+ + M+++GV+P+V T+ ++D LC GK EA +LL
Sbjct: 282 AITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLN 341
Query: 348 LMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSME 385
LMI + PN T++ +++ C G V A E+ M+
Sbjct: 342 LMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMK 379
Score = 118 bits (296), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 153/324 (47%), Gaps = 34/324 (10%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA + + M+ P +T +N++ L K + + + + PD TYNIL
Sbjct: 335 EALQLLNLMIEKDEEPNAVT-YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNIL 393
Query: 149 INCFCKMGRVSHGFVVLGRILR-SCFT-PDAVAFTSLIKGLCAESRIMEAAALFTKLKAF 206
+ C G + +L +L+ S +T PD +++ +LI GLC E+R+ +A ++ L
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453
Query: 207 GCKPNVITYSTLINGLCRTGHTIVALNLFEEMANG----------------------NGK 244
+ +T + L+N + G A+ L++++++ N
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513
Query: 245 FGVVCK-------PNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHG 297
G++CK P+ Y ++ LCKEG +D+A LF +M+ N PDVV++N +I G
Sbjct: 514 KGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDG 573
Query: 298 FCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPN 357
A D A LL+ M G+ PD+ T++ +++ K G +DEA + M+ G P+
Sbjct: 574 SLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPD 633
Query: 358 TSTFSTLMDGFCLT-GRVNHAKEL 380
+++ +C++ G + EL
Sbjct: 634 AHICDSVLK-YCISQGETDKLTEL 656
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 124/267 (46%), Gaps = 6/267 (2%)
Query: 103 SPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGF 162
+ P + S+N L L K L ++ L D T NIL+N K G V+
Sbjct: 420 TDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAM 479
Query: 163 VVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGL 222
+ +I S ++ +T++I G C + A L K++ +P+V Y+ L++ L
Sbjct: 480 ELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL 539
Query: 223 CRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDK 282
C+ G A LFEEM N P+ V++ +IDG K G + A+ L + M
Sbjct: 540 CKEGSLDQAWRLFEEMQRDNNF------PDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA 593
Query: 283 NINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEA 342
++PD+ TY+ LI+ F +EA +M+D G +PD + ++ G+ D+
Sbjct: 594 GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKL 653
Query: 343 SRLLELMILRGVNPNTSTFSTLMDGFC 369
+ L++ ++ + + + T+MD C
Sbjct: 654 TELVKKLVDKDIVLDKELTCTVMDYMC 680
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 128/262 (48%), Gaps = 8/262 (3%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
++A I+D ++ + +T+ N+L K + + L+K+++ + + + TY
Sbjct: 441 HQALDIYDLLVEKLGAGDRVTT-NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTA 499
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
+I+ FCK G ++ +L ++ S P + L+ LC E + +A LF +++
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
P+V++++ +I+G + G A E + G + G+ P+ TY+ +I+ K G
Sbjct: 560 NFPDVVSFNIMIDGSLKAGDIKSA----ESLLVGMSRAGL--SPDLFTYSKLINRFLKLG 613
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
++D+A F +M D PD +S++ + ++ L+ +++D+ + D
Sbjct: 614 YLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTC 673
Query: 328 VIMDELCK-NGKMDEASRLLEL 348
+MD +C + MD A RLL +
Sbjct: 674 TVMDYMCNSSANMDLAKRLLRV 695
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%)
Query: 314 MMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGR 373
M+ +G +V N+++ LC+N + +A LL M + P+ +++T++ GFC
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 374 VNHAKELFVSMESMGCKHTVFSY 396
+ A EL M+ GC ++ ++
Sbjct: 193 LEKALELANEMKGSGCSWSLVTW 215
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 162 bits (411), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 153/308 (49%), Gaps = 8/308 (2%)
Query: 83 TAITPNEAFCIFDYMLNM--RPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFP 140
+ + E ++ ++ M R P + +FN+L L ++ L +++ +G P
Sbjct: 167 SVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAP 226
Query: 141 DLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALF 200
+ TYN +++ +CK GR +L + D + LI LC +RI + L
Sbjct: 227 TIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLL 286
Query: 201 TKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTII 260
++ PN +TY+TLING G ++A L EM + FG+ PN VT+ +I
Sbjct: 287 RDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS----FGL--SPNHVTFNALI 340
Query: 261 DGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQ 320
DG EG +A ++F M+ K + P V+Y L+ G C +++ A + M GV
Sbjct: 341 DGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC 400
Query: 321 PDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKEL 380
+T+ ++D LCKNG +DEA LL M G++P+ T+S L++GFC GR AKE+
Sbjct: 401 VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 460
Query: 381 FVSMESMG 388
+ +G
Sbjct: 461 VCRIYRVG 468
Score = 157 bits (398), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 159/314 (50%), Gaps = 29/314 (9%)
Query: 104 PPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 163
P + ++N + K + + L + S G+ D+ TYN+LI+ C+ R++ G++
Sbjct: 225 APTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL 284
Query: 164 VLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLC 223
+L + + P+ V + +LI G E +++ A+ L ++ +FG PN +T++ LI+G
Sbjct: 285 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 344
Query: 224 RTGHTIVALNLFEEM-ANG----NGKFGVV----CK--------------------PNTV 254
G+ AL +F M A G +GV+ CK +
Sbjct: 345 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 404
Query: 255 TYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEM 314
TYT +IDGLCK GF+D+A L +M I+PD+VTY++LI+GFC + A ++ +
Sbjct: 405 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 464
Query: 315 MDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRV 374
G+ P+ + ++ ++ C+ G + EA R+ E MIL G + TF+ L+ C G+V
Sbjct: 465 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 524
Query: 375 NHAKELFVSMESMG 388
A+E M S G
Sbjct: 525 AEAEEFMRCMTSDG 538
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 149/301 (49%), Gaps = 8/301 (2%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
+AF +FD M + P T +LL G L K H K L++ D YN L
Sbjct: 561 KAFSVFDEMTKVGHHPTFFTYGSLLKG-LCKGGHLREAEKFLKSLHAVPAAVDTVMYNTL 619
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG- 207
+ CK G ++ + G +++ PD+ +TSLI GLC + + + A + +A G
Sbjct: 620 LTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGN 679
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
PN + Y+ ++G+ + G + E+M N + P+ VT +IDG + G
Sbjct: 680 VLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN------LGHTPDIVTTNAMIDGYSRMG 733
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
++K +L +M ++N P++ TYN L+HG+ D + + L ++ G+ PD +T +
Sbjct: 734 KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 793
Query: 328 VIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESM 387
++ +C++ ++ ++L+ I RGV + TF+ L+ C G +N A +L M S+
Sbjct: 794 SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSL 853
Query: 388 G 388
G
Sbjct: 854 G 854
Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 141/307 (45%), Gaps = 9/307 (2%)
Query: 79 QGDITAITPNEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGL 138
G I+ EA +F YM+ + P S+ +L L K +D + R+ G+
Sbjct: 341 DGHISEGNFKEALKMF-YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGV 399
Query: 139 FPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAA 198
TY +I+ CK G + V+L + + PD V +++LI G C R A
Sbjct: 400 CVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKE 459
Query: 199 LFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMA-NGNGKFGVVCKPNTVTYT 257
+ ++ G PN I YSTLI CR G A+ ++E M G+ + + T+
Sbjct: 460 IVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR-------DHFTFN 512
Query: 258 TIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQ 317
++ LCK G V +A+E M I P+ V+++ LI+G+ + + +A + EM
Sbjct: 513 VLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKV 572
Query: 318 GVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHA 377
G P T+ ++ LCK G + EA + L+ + +T ++TL+ C +G + A
Sbjct: 573 GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKA 632
Query: 378 KELFVSM 384
LF M
Sbjct: 633 VSLFGEM 639
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 135/296 (45%), Gaps = 22/296 (7%)
Query: 117 LAKTKHYDTVLSLFKRLN-----STGLFPDLYT-----------YNILINCFCKMGRVSH 160
L + + YD + K L+ S+ +F L T Y+ILI + + G +
Sbjct: 82 LVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQD 141
Query: 161 GFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLIN 220
+ + F P +++ + + + ++ P+V T++ LIN
Sbjct: 142 SLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILIN 201
Query: 221 GLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMK 280
LC G + L ++M K G P VTY T++ CK+G A EL MK
Sbjct: 202 VLCAEGSFEKSSYLMQKME----KSGYA--PTIVTYNTVLHWYCKKGRFKAAIELLDHMK 255
Query: 281 DKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMD 340
K ++ DV TYN LIH C +N + LL +M + + P+ VT+N +++ GK+
Sbjct: 256 SKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVL 315
Query: 341 EASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
AS+LL M+ G++PN TF+ L+DG G A ++F ME+ G + SY
Sbjct: 316 IASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSY 371
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 141/297 (47%), Gaps = 11/297 (3%)
Query: 93 IFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 152
+ + ML+ SP +T FN L ++ L +F + + GL P +Y +L++
Sbjct: 320 LLNEMLSFGLSPNHVT-FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGL 378
Query: 153 CKMGR--VSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKP 210
CK ++ GF + R+ R+ + +T +I GLC + EA L ++ G P
Sbjct: 379 CKNAEFDLARGFYM--RMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP 436
Query: 211 NVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVD 270
+++TYS LING C+ G A + + + V PN + Y+T+I C+ G +
Sbjct: 437 DIVTYSALINGFCKVGRFKTAKEIVCRI------YRVGLSPNGIIYSTLIYNCCRMGCLK 490
Query: 271 KAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIM 330
+A ++ M + D T+N L+ C A EA + M G+ P+ V+F+ ++
Sbjct: 491 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 550
Query: 331 DELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESM 387
+ +G+ +A + + M G +P T+ +L+ G C G + A++ S+ ++
Sbjct: 551 NGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAV 607
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 138/295 (46%), Gaps = 12/295 (4%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P + + N + ++ + L + + P+L TYNIL++ + K VS F++
Sbjct: 717 PDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL 776
Query: 165 LGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKP---NVITYSTLING 221
I+ + PD + SL+ G+C ES ++E LKAF C+ + T++ LI+
Sbjct: 777 YRSIILNGILPDKLTCHSLVLGIC-ESNMLEIG--LKILKAFICRGVEVDRYTFNMLISK 833
Query: 222 LCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKD 281
C G A +L + M + G+ +T ++ L + +++ + +M
Sbjct: 834 CCANGEINWAFDLVKVMTS----LGISLDKDTCD--AMVSVLNRNHRFQESRMVLHEMSK 887
Query: 282 KNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDE 341
+ I+P+ Y LI+G C D A + EM+ + P V + ++ L K GK DE
Sbjct: 888 QGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADE 947
Query: 342 ASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
A+ LL M+ + P ++F+TLM C G V A EL V M + G K + SY
Sbjct: 948 ATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSY 1002
Score = 95.1 bits (235), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 122/265 (46%), Gaps = 7/265 (2%)
Query: 104 PPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 163
P LT +L+ G + ++ + L + K G+ D YT+N+LI+ C G ++ F
Sbjct: 787 PDKLTCHSLVLG-ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFD 845
Query: 164 VLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLC 223
++ + + D +++ L R E+ + ++ G P Y LINGLC
Sbjct: 846 LVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLC 905
Query: 224 RTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKN 283
R G A + EEM +C PN V + ++ L K G D+A L M
Sbjct: 906 RVGDIKTAFVVKEEMIAHK-----ICPPN-VAESAMVRALAKCGKADEATLLLRFMLKMK 959
Query: 284 INPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEAS 343
+ P + ++ +L+H C + EA L + M + G++ D+V++NV++ LC G M A
Sbjct: 960 LVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAF 1019
Query: 344 RLLELMILRGVNPNTSTFSTLMDGF 368
L E M G N +T+ L+ G
Sbjct: 1020 ELYEEMKGDGFLANATTYKALIRGL 1044
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 124/284 (43%), Gaps = 6/284 (2%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P LT++N+L +K K T L++ + G+ PD T + L+ C+ + G +
Sbjct: 752 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 811
Query: 165 LGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCR 224
L + D F LI CA I A L + + G + T +++ L R
Sbjct: 812 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 871
Query: 225 TGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNI 284
+ + EM+ K G+ P + Y +I+GLC+ G + A + +M I
Sbjct: 872 NHRFQESRMVLHEMS----KQGI--SPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKI 925
Query: 285 NPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASR 344
P V ++++ +EA LL M+ + P + +F +M CKNG + EA
Sbjct: 926 CPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALE 985
Query: 345 LLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMG 388
L +M G+ + +++ L+ G C G + A EL+ M+ G
Sbjct: 986 LRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDG 1029
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
Query: 90 AFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILI 149
AF + + M+ + PP + + + LAK D L + + L P + ++ L+
Sbjct: 913 AFVVKEEMIAHKICPPNVAE-SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 971
Query: 150 NCFCKMGRVSHGFVVLGRILRSC-FTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGC 208
+ CK G V + L ++ +C D V++ LI GLCA+ + A L+ ++K G
Sbjct: 972 HLCCKNGNVIEA-LELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGF 1030
Query: 209 KPNVITYSTLINGL 222
N TY LI GL
Sbjct: 1031 LANATTYKALIRGL 1044
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Query: 87 PNEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYN 146
+EA + +ML M+ P + SF L K + L L +++ GL DL +YN
Sbjct: 945 ADEATLLLRFMLKMKL-VPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1003
Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTK 202
+LI C G ++ F + + F +A + +LI+GL A A + K
Sbjct: 1004 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1059
>sp|Q9ZUE9|PP149_ARATH Pentatricopeptide repeat-containing protein At2g06000
OS=Arabidopsis thaliana GN=At2g06000 PE=2 SV=1
Length = 536
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 143/277 (51%), Gaps = 7/277 (2%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGL-FPDLYTYNILINCFCKMGRVSHGFV 163
P + ++N L K+ + +FK + S + PD+ TY +I+ +CK G++
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASS 298
Query: 164 VLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLC 223
+L +LR P V F L+ G ++ A + K+ +FGC P+V+T+++LI+G C
Sbjct: 299 LLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC 358
Query: 224 RTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKN 283
R G L+EEM N G F PN TY+ +I+ LC E + KA+EL Q+ K+
Sbjct: 359 RVGQVSQGFRLWEEM-NARGMF-----PNAFTYSILINALCNENRLLKARELLGQLASKD 412
Query: 284 INPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEAS 343
I P YN +I GFC A NEAN ++ EM + +PD +TF +++ C G+M EA
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAV 472
Query: 344 RLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKEL 380
+ M+ G +P+ T S+L+ G A L
Sbjct: 473 SIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 156/302 (51%), Gaps = 8/302 (2%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
+A +FD L + S +FN+L L + L L ++ G PD+ TYN L
Sbjct: 189 DAMKLFDEHLRFQ-SCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTL 247
Query: 149 INCFCKMGRVSHGFVVLGRILR-SCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
I FCK ++ + + S +PD V +TS+I G C ++ EA++L + G
Sbjct: 248 IQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLG 307
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
P +T++ L++G + G + A EE+ FG C P+ VT+T++IDG C+ G
Sbjct: 308 IYPTNVTFNVLVDGYAKAGEMLTA----EEIRGKMISFG--CFPDVVTFTSLIDGYCRVG 361
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
V + L+ +M + + P+ TY+ LI+ C N +A LL ++ + + P +N
Sbjct: 362 QVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYN 421
Query: 328 VIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESM 387
++D CK GK++EA+ ++E M + P+ TF+ L+ G C+ GR+ A +F M ++
Sbjct: 422 PVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAI 481
Query: 388 GC 389
GC
Sbjct: 482 GC 483
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 155/324 (47%), Gaps = 41/324 (12%)
Query: 96 YMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPD-------------- 141
+ LN+R S ++NLL L K +D +F+ + S G+ P+
Sbjct: 95 FKLNIRHS---FWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEK 151
Query: 142 ----------LYTY---------NILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTS 182
L ++ N L+N K+ RV + LR D F
Sbjct: 152 GKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNI 211
Query: 183 LIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGN 242
LI+GLC + +A L + FGC+P+++TY+TLI G C++ A +F+++ +G+
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271
Query: 243 GKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYAN 302
VC P+ VTYT++I G CK G + +A L M I P VT+N L+ G+ A
Sbjct: 272 -----VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAG 326
Query: 303 DWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFS 362
+ A + +M+ G PDVVTF ++D C+ G++ + RL E M RG+ PN T+S
Sbjct: 327 EMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYS 386
Query: 363 TLMDGFCLTGRVNHAKELFVSMES 386
L++ C R+ A+EL + S
Sbjct: 387 ILINALCNENRLLKARELLGQLAS 410
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 137/289 (47%), Gaps = 40/289 (13%)
Query: 142 LYTYNILINCFCKMG---------------RVSHGFVVLGRILRSCFTPDAVAFT----- 181
+TYN+L CK G VS +LG ++ S + F
Sbjct: 103 FWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLL 162
Query: 182 -------------SLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHT 228
SL+ L R+ +A LF + F + T++ LI GLC G
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 229 IVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNI-NPD 287
AL L M+ G C+P+ VTY T+I G CK ++KA E+F +K ++ +PD
Sbjct: 223 EKALELLGVMS------GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD 276
Query: 288 VVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLE 347
VVTY S+I G+C A EA+ LL +M+ G+ P VTFNV++D K G+M A +
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Query: 348 LMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
MI G P+ TF++L+DG+C G+V+ L+ M + G F+Y
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTY 385
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 1/147 (0%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
++ F +++ M N R P ++++L L L +L S + P + YN
Sbjct: 364 SQGFRLWEEM-NARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNP 422
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
+I+ FCK G+V+ V++ + + PD + FT LI G C + R+ EA ++F K+ A G
Sbjct: 423 VIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNL 234
C P+ IT S+L++ L + G A +L
Sbjct: 483 CSPDKITVSSLLSCLLKAGMAKEAYHL 509
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 162 bits (409), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 155/337 (45%), Gaps = 45/337 (13%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P ++++ + L + LF+ + GL D+YTY I+++ FCK G +
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540
Query: 165 LGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCR 224
+ TP+ V +T+LI ++ A LF + + GC PN++TYS LI+G C+
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 225 TGHTIVALNLFEEMANGNG---------------------KFGVV--------------- 248
G A +FE M +G +
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 660
Query: 249 ---------CKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFC 299
C+PN + Y +IDGLCK G +D+A+E+ +M + + TY+SLI +
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720
Query: 300 YANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTS 359
+ A+ +L +M++ P+VV + ++D LCK GK DEA +L+++M +G PN
Sbjct: 721 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV 780
Query: 360 TFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
T++ ++DGF + G++ EL M S G +Y
Sbjct: 781 TYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 817
Score = 131 bits (330), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 143/303 (47%), Gaps = 11/303 (3%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
EA + D M +M P ++ L L K D + ++ G LYTY+
Sbjct: 656 EEARKLLDAM-SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 714
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
LI+ + K+ R VL ++L + P+ V +T +I GLC + EA L ++ G
Sbjct: 715 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
C+PNV+TY+ +I+G G L L E M G GV PN VTY +ID CK G
Sbjct: 775 CQPNVVTYTAMIDGFGMIGKIETCLELLERM----GSKGVA--PNYVTYRVLIDHCCKNG 828
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
+D A L +MK + Y +I GF ++ E+ LL E+ P + +
Sbjct: 829 ALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYR 886
Query: 328 VIMDELCKNGKMDEASRLLELMILRGVN--PNTSTFSTLMDGFCLTGRVNHAKELFVSME 385
+++D L K +++ A RLLE + +ST+++L++ CL +V A +LF M
Sbjct: 887 LLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMT 946
Query: 386 SMG 388
G
Sbjct: 947 KKG 949
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 139/299 (46%), Gaps = 16/299 (5%)
Query: 95 DYMLNMRPS---PPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 151
D++ MR + P +T LL GCL K K + + G +P +N L++
Sbjct: 323 DFLNRMRATSCLPNVVTYSTLLCGCLNK-KQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 381
Query: 152 FCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIME------AAALFTKLKA 205
+C G S+ + +L ++++ P V + LI +C + + A ++++ A
Sbjct: 382 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLA 441
Query: 206 FGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCK 265
G N I S+ LC G A ++ EM G G P+T TY+ +++ LC
Sbjct: 442 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI-GQGFI-----PDTSTYSKVLNYLCN 495
Query: 266 EGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVT 325
++ A LF +MK + DV TY ++ FC A +A EM + G P+VVT
Sbjct: 496 ASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVT 555
Query: 326 FNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSM 384
+ ++ K K+ A+ L E M+ G PN T+S L+DG C G+V A ++F M
Sbjct: 556 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 139/333 (41%), Gaps = 50/333 (15%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P +++N L K D+ + + ++ L D +T CK+G+ +
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292
Query: 165 LGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYST------- 217
+ F PD V +T LI GLC S EA +++A C PNV+TYST
Sbjct: 293 ---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349
Query: 218 ----------------------------LINGLCRTGHTIVALNLFEEMANGNGKFGVVC 249
L++ C +G A L ++M K G +
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMV----KCGHM- 404
Query: 250 KPNTVTYTTIIDGLCKE------GFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYAND 303
P V Y +I +C + +D A++ + +M + + + +S C A
Sbjct: 405 -PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK 463
Query: 304 WNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFST 363
+ +A ++ EM+ QG PD T++ +++ LC KM+ A L E M G+ + T++
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523
Query: 364 LMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
++D FC G + A++ F M +GC V +Y
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTY 556
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 127/325 (39%), Gaps = 81/325 (24%)
Query: 146 NILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTK--- 202
N+L+ C+ G S LGR+ F P + LI+ R+ A+ + +
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 203 ---------LKAFG---CK-----------------PNVITYSTLINGLCRTGHTIVALN 233
L+ F CK P+ + Y+ LI+GLC +
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEA-------S 316
Query: 234 LFEE-MANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYN 292
LFEE M N C PN VTY+T++ G + + + K + M + P +N
Sbjct: 317 LFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFN 376
Query: 293 SLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDE-------------------- 332
SL+H +C + D + A LL +M+ G P V +N+++
Sbjct: 377 SLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAY 436
Query: 333 ---------------------LCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLT 371
LC GK ++A ++ MI +G P+TST+S +++ C
Sbjct: 437 SEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNA 496
Query: 372 GRVNHAKELFVSMESMGCKHTVFSY 396
++ A LF M+ G V++Y
Sbjct: 497 SKMELAFLLFEEMKRGGLVADVYTY 521
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 109/234 (46%), Gaps = 8/234 (3%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+EA+ + M+ + P + ++ + +T L L +R+ S G+ P+ TY +
Sbjct: 761 DEAYKLMQ-MMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRV 819
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
LI+ CK G + +L + ++ + + +I+G E +E+ L ++
Sbjct: 820 LIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQDD 877
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
P + Y LI+ L + +AL L EE+A F + TY ++I+ LC
Sbjct: 878 TAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT----FSATLVDYSSTYNSLIESLCLAN 933
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQP 321
V+ A +LF +M K + P++ ++ SLI G + +EA LL++ + V P
Sbjct: 934 KVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA-LLLLDFISHMVCP 986
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 149/285 (52%), Gaps = 2/285 (0%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P +FNLL L + D LF + G P+ +T+ IL+ +CK G G +
Sbjct: 145 PQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLEL 204
Query: 165 LGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCR 224
L + P+ V + +++ C E R ++ + K++ G P+++T+++ I+ LC+
Sbjct: 205 LNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCK 264
Query: 225 TGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNI 284
G + A +F +M ++ + +PN++TY ++ G CK G ++ AK LF +++ +
Sbjct: 265 EGKVLDASRIFSDMELD--EYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDD 322
Query: 285 NPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASR 344
+ +YN + G + EA +L +M D+G+ P + ++N++MD LCK G + +A
Sbjct: 323 LASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKT 382
Query: 345 LLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGC 389
++ LM GV P+ T+ L+ G+C G+V+ AK L M C
Sbjct: 383 IVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNC 427
Score = 148 bits (373), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 150/315 (47%), Gaps = 30/315 (9%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P ++ L D SL + + P+ YT NIL++ KMGR+S +
Sbjct: 394 PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEEL 453
Query: 165 LGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG----------------- 207
L ++ + D V ++ GLC + +A + ++ G
Sbjct: 454 LRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDD 513
Query: 208 ------CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIID 261
C P++ITYSTL+NGLC+ G A NLF EM G +P++V Y I
Sbjct: 514 SLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM------MGEKLQPDSVAYNIFIH 567
Query: 262 GLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQP 321
CK+G + A + M+ K + + TYNSLI G N E + L+ EM ++G+ P
Sbjct: 568 HFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISP 627
Query: 322 DVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELF 381
++ T+N + LC+ K+++A+ LL+ M+ + + PN +F L++ FC + A+E+F
Sbjct: 628 NICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF 687
Query: 382 VSMESM-GCKHTVFS 395
+ S+ G K ++S
Sbjct: 688 ETAVSICGQKEGLYS 702
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 152/329 (46%), Gaps = 34/329 (10%)
Query: 93 IFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 152
+FD M P T F +L K D L L + S G+ P+ YN +++ F
Sbjct: 169 LFDEMPEKGCKPNEFT-FGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSF 227
Query: 153 CKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKA---FGC- 208
C+ GR ++ ++ PD V F S I LC E ++++A+ +F+ ++ G
Sbjct: 228 CREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLP 287
Query: 209 KPNVITYSTLINGLCRTGHTIVALNLFEEMANGN------------------GKF---GV 247
+PN ITY+ ++ G C+ G A LFE + + GKF
Sbjct: 288 RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAET 347
Query: 248 VCK--------PNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFC 299
V K P+ +Y ++DGLCK G + AK + MK + PD VTY L+HG+C
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407
Query: 300 YANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTS 359
+ A LL EMM P+ T N+++ L K G++ EA LL M +G +T
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTV 467
Query: 360 TFSTLMDGFCLTGRVNHAKELFVSMESMG 388
T + ++DG C +G ++ A E+ M G
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHG 496
Score = 125 bits (315), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 150/325 (46%), Gaps = 51/325 (15%)
Query: 107 LTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPD----LYTYNILINCFCKMGRVSHGF 162
L+S + AK+ H D F+ + S FP+ +Y YN+L+ K RV
Sbjct: 75 LSSLLSVVSIFAKSNHIDKAFPQFQLVRSR--FPENKPSVYLYNLLLESCIKERRVEFVS 132
Query: 163 VVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGL 222
+ ++ P F LI+ LC S + A LF ++ GCKPN T+ L+ G
Sbjct: 133 WLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGY 192
Query: 223 CRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDK 282
C+ G T L L M + FGV+ PN V Y TI+ C+EG D ++++ +M+++
Sbjct: 193 CKAGLTDKGLELLNAMES----FGVL--PNKVIYNTIVSSFCREGRNDDSEKMVEKMREE 246
Query: 283 NINPDVVTYNSLIHGFCYANDWNEANCLLIEM-MDQGV---QPDVVTFNVIMDELCK--- 335
+ PD+VT+NS I C +A+ + +M +D+ + +P+ +T+N+++ CK
Sbjct: 247 GLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGL 306
Query: 336 --------------------------------NGKMDEASRLLELMILRGVNPNTSTFST 363
+GK EA +L+ M +G+ P+ +++
Sbjct: 307 LEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNI 366
Query: 364 LMDGFCLTGRVNHAKELFVSMESMG 388
LMDG C G ++ AK + M+ G
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKRNG 391
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 127/275 (46%), Gaps = 10/275 (3%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P L +++ L L K + +LF + L PD YNI I+ FCK G++S F V
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 165 LGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCR 224
L + + + SLI GL +++I E L ++K G PN+ TY+T I LC
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641
Query: 225 TGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNI 284
A NL +EM N PN ++ +I+ CK D A+E+F +
Sbjct: 642 GEKVEDATNLLDEMMQKN------IAPNVFSFKYLIEAFCKVPDFDMAQEVF-ETAVSIC 694
Query: 285 NPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASR 344
Y+ + + A +A LL ++D+G + + +++ LCK +++ AS
Sbjct: 695 GQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASG 754
Query: 345 LLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKE 379
+L MI RG + + ++DG G++ + KE
Sbjct: 755 ILHKMIDRGYGFDPAALMPVIDGL---GKMGNKKE 786
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 18/256 (7%)
Query: 62 DRASLEQFLKERCKSSGQGDITAITPNEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTK 121
D + F+ CK QG I++ AF + M + L ++N L L
Sbjct: 558 DSVAYNIFIHHFCK---QGKISS-----AFRVLKDM-EKKGCHKSLETYNSLILGLGIKN 608
Query: 122 HYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFT 181
+ L + G+ P++ TYN I C+ +V +L +++ P+ +F
Sbjct: 609 QIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFK 668
Query: 182 SLIKGLCAESRIMEAAALF-TKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMAN 240
LI+ C A +F T + G K + YS + N L G + A L E + +
Sbjct: 669 YLIEAFCKVPDFDMAQEVFETAVSICGQKEGL--YSLMFNELLAAGQLLKATELLEAVLD 726
Query: 241 GNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCY 300
+ G T Y +++ LCK+ ++ A + +M D+ D +I G
Sbjct: 727 RGFELG------TFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGK 780
Query: 301 ANDWNEANCLLIEMMD 316
+ EAN +MM+
Sbjct: 781 MGNKKEANSFADKMME 796
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%)
Query: 320 QPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKE 379
+P V +N++++ K +++ S L + M+L G+ P T TF+ L+ C + V+ A+E
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 380 LFVSMESMGCKHTVFSY 396
LF M GCK F++
Sbjct: 169 LFDEMPEKGCKPNEFTF 185
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 154/301 (51%), Gaps = 7/301 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
++A +FD + R P + SFN L K + D L ++ + PD++TY+
Sbjct: 257 SDAQKVFDE-ITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSA 315
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
LIN CK ++ + + + P+ V FT+LI G I + K+ + G
Sbjct: 316 LINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKG 375
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
+P+++ Y+TL+NG C+ G + A N+ + M +P+ +TYTT+IDG C+ G
Sbjct: 376 LQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG------LRPDKITYTTLIDGFCRGG 429
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
V+ A E+ +M I D V +++L+ G C +A L EM+ G++PD VT+
Sbjct: 430 DVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYT 489
Query: 328 VIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESM 387
++MD CK G +LL+ M G P+ T++ L++G C G++ +A L +M ++
Sbjct: 490 MMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNI 549
Query: 388 G 388
G
Sbjct: 550 G 550
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 150/293 (51%), Gaps = 6/293 (2%)
Query: 104 PPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFV 163
P + FN+L K + +F + L P + ++N LIN +CK+G + GF
Sbjct: 237 PLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFR 296
Query: 164 VLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLC 223
+ ++ +S PD +++LI LC E+++ A LF ++ G PN + ++TLI+G
Sbjct: 297 LKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHS 356
Query: 224 RTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKN 283
R G + +++M + +P+ V Y T+++G CK G + A+ + M +
Sbjct: 357 RNGEIDLMKESYQKMLSKG------LQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 284 INPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEAS 343
+ PD +TY +LI GFC D A + EM G++ D V F+ ++ +CK G++ +A
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAE 470
Query: 344 RLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
R L M+ G+ P+ T++ +MD FC G +L M+S G +V +Y
Sbjct: 471 RALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTY 523
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 140/272 (51%), Gaps = 6/272 (2%)
Query: 125 TVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLI 184
T+ + + G ++Y +NIL+N FCK G +S V I + P V+F +LI
Sbjct: 223 TIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLI 282
Query: 185 KGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGK 244
G C + E L +++ +P+V TYS LIN LC+ A LF+EM K
Sbjct: 283 NGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMC----K 338
Query: 245 FGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDW 304
G++ PN V +TT+I G + G +D KE + +M K + PD+V YN+L++GFC D
Sbjct: 339 RGLI--PNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDL 396
Query: 305 NEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTL 364
A ++ M+ +G++PD +T+ ++D C+ G ++ A + + M G+ + FS L
Sbjct: 397 VAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSAL 456
Query: 365 MDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
+ G C GRV A+ M G K +Y
Sbjct: 457 VCGMCKEGRVIDAERALREMLRAGIKPDDVTY 488
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 159 bits (403), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 157/300 (52%), Gaps = 14/300 (4%)
Query: 93 IFDYMLNMRPSPPPLTSFNLL-FGCL--AKTKHYDTVLS-LFKRLNSTGLFPDLYTYNIL 148
+FD M ++R P +S+ L+ GC K + D L+ + +R G PD T ++
Sbjct: 204 VFDEM-SVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQR----GFIPDNATCTLI 258
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGC 208
+ C+ G V+ +++ F P+ + FTSLI GLC + I +A + ++ G
Sbjct: 259 LTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGW 318
Query: 209 KPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGF 268
KPNV T++ LI+GLC+ G T A LF ++ + KPN TYT++I G CKE
Sbjct: 319 KPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD-----TYKPNVHTYTSMIGGYCKEDK 373
Query: 269 VDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNV 328
+++A+ LF +MK++ + P+V TY +LI+G C A + A L+ M D+G P++ T+N
Sbjct: 374 LNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNA 433
Query: 329 IMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMG 388
+D LCK + EA LL G+ + T++ L+ C +N A F M G
Sbjct: 434 AIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTG 493
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 153/310 (49%), Gaps = 8/310 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
N A F M+++ P L +F L L K + + + G P++YT+
Sbjct: 269 NRAIWYFRKMIDL-GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 327
Query: 148 LINCFCKMGRVSHGFVVLGRILRS-CFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAF 206
LI+ CK G F + +++RS + P+ +TS+I G C E ++ A LF+++K
Sbjct: 328 LIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 387
Query: 207 GCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKE 266
G PNV TY+TLING C+ G + E+ N G G + PN TY ID LCK+
Sbjct: 388 GLFPNVNTYTTLINGHCKAG----SFGRAYELMNLMGDEGFM--PNIYTYNAAIDSLCKK 441
Query: 267 GFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTF 326
+A EL + + D VTY LI C ND N+A M G + D+
Sbjct: 442 SRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLN 501
Query: 327 NVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMES 386
N+++ C+ KM E+ RL +L++ G+ P T+++++ +C G ++ A + F +M+
Sbjct: 502 NILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKR 561
Query: 387 MGCKHTVFSY 396
GC F+Y
Sbjct: 562 HGCVPDSFTY 571
Score = 155 bits (391), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 155/314 (49%), Gaps = 15/314 (4%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
NEA + M N +P +T N + + + ++F ++ G+ PD +Y +
Sbjct: 164 NEAVGMVMDMQNQGLTPSSIT-MNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKL 222
Query: 148 L-INCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAF 206
+ I CF + G++ L +++ F PD T ++ LC + A F K+
Sbjct: 223 MVIGCF-RDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDL 281
Query: 207 GCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKE 266
G KPN+I +++LI+GLC+ G A + EEM NG KPN T+T +IDGLCK
Sbjct: 282 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR-NG-----WKPNVYTHTALIDGLCKR 335
Query: 267 GFVDKAKELFLQM-KDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVT 325
G+ +KA LFL++ + P+V TY S+I G+C + N A L M +QG+ P+V T
Sbjct: 336 GWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNT 395
Query: 326 FNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELF---- 381
+ +++ CK G A L+ LM G PN T++ +D C R A EL
Sbjct: 396 YTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAF 455
Query: 382 -VSMESMGCKHTVF 394
+E+ G +T+
Sbjct: 456 SCGLEADGVTYTIL 469
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 122/250 (48%), Gaps = 7/250 (2%)
Query: 148 LINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFG 207
++ F ++GR++ ++ + TP ++ +++ I A +F ++ G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 208 CKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEG 267
P+ +Y ++ G R G A + G + G + P+ T T I+ LC+ G
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEA----DRWLTGMIQRGFI--PDNATCTLILTALCENG 266
Query: 268 FVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFN 327
V++A F +M D P+++ + SLI G C +A +L EM+ G +P+V T
Sbjct: 267 LVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHT 326
Query: 328 VIMDELCKNGKMDEASRL-LELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMES 386
++D LCK G ++A RL L+L+ PN T+++++ G+C ++N A+ LF M+
Sbjct: 327 ALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKE 386
Query: 387 MGCKHTVFSY 396
G V +Y
Sbjct: 387 QGLFPNVNTY 396
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 105/230 (45%), Gaps = 15/230 (6%)
Query: 182 SLIKGLCAESRIMEA------AALFTKLKAFGCKPNVITYSTLINGLCRTGHTIV--ALN 233
+++ L +ES M A A F K + F V S L NG + H ++ L
Sbjct: 96 TVVASLASESGSMVALCFFYWAVGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLR 155
Query: 234 LFEEMANGNGKFGVVCK-------PNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINP 286
F E+ N G+V P+++T +++ + G ++ A+ +F +M + + P
Sbjct: 156 NFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVP 215
Query: 287 DVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLL 346
D +Y ++ G EA+ L M+ +G PD T +I+ LC+NG ++ A
Sbjct: 216 DSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYF 275
Query: 347 ELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
MI G PN F++L+DG C G + A E+ M G K V+++
Sbjct: 276 RKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTH 325
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 103/248 (41%), Gaps = 12/248 (4%)
Query: 108 TSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGR 167
++ +L K + L+ F R+N TG D+ NILI FC+ ++ +
Sbjct: 464 VTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQL 523
Query: 168 ILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGH 227
++ P +TS+I C E I A F +K GC P+ TY +LI+GLC+
Sbjct: 524 VVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSM 583
Query: 228 TIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKEL-FLQMKDKNINP 286
A L+E M + P VT T+ CK D A + L+ DK +
Sbjct: 584 VDEACKLYEAMIDRG------LSPPEVTRVTLAYEYCKRN--DSANAMILLEPLDKKLW- 634
Query: 287 DVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLL 346
+ T +L+ C A +++++ D VT ++GK + + L
Sbjct: 635 -IRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVTDLT 693
Query: 347 ELMILRGV 354
E I RGV
Sbjct: 694 E-RISRGV 700
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 74/215 (34%), Gaps = 45/215 (20%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P ++ + C K D L F + G PD +TY
Sbjct: 531 PTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYG------------------ 572
Query: 165 LGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCR 224
SLI GLC +S + EA L+ + G P +T TL C+
Sbjct: 573 -----------------SLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCK 615
Query: 225 TGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNI 284
+ A+ L E + K T T++ LC E V A F ++ +K+
Sbjct: 616 RNDSANAMILLEPLDK---------KLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDS 666
Query: 285 NPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGV 319
+ D VT + C + N L E + +GV
Sbjct: 667 SADRVTLAAFTTA-CSESGKNNLVTDLTERISRGV 700
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 159 bits (403), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 166/340 (48%), Gaps = 31/340 (9%)
Query: 87 PNEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYN 146
P++A +F M + P + S+N L + K + V SLF + G+ P+L TYN
Sbjct: 94 PDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYN 153
Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAF 206
+LI CK L + + F PD +++++I L ++ +A LF ++
Sbjct: 154 VLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSER 213
Query: 207 GCKPNVITYSTLINGLCRTGHTIVALNLFEE----------------MANGNGKFGVV-- 248
G P+V Y+ LI+G + A+ L++ M +G K G V
Sbjct: 214 GVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDD 273
Query: 249 C------------KPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIH 296
C + + TY+++I GLC G VDKA+ +F ++ ++ + DVVTYN+++
Sbjct: 274 CLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLG 333
Query: 297 GFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNP 356
GFC E+ L +M+ ++V++N+++ L +NGK+DEA+ + LM +G
Sbjct: 334 GFCRCGKIKES-LELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAA 392
Query: 357 NTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
+ +T+ + G C+ G VN A + +ES G V++Y
Sbjct: 393 DKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAY 432
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 155/310 (50%), Gaps = 9/310 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRL-NSTGLFPDLYTYN 146
++A +FD M + R P +T +N+L K K + T + L+ RL + ++P++ T+N
Sbjct: 201 DDALELFDEM-SERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHN 259
Query: 147 ILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAF 206
I+I+ K GRV + R+ ++ D ++SLI GLC + +A ++F +L
Sbjct: 260 IMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDER 319
Query: 207 GCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKE 266
+V+TY+T++ G CR G +L L+ M + N N V+Y +I GL +
Sbjct: 320 KASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNS-------VNIVSYNILIKGLLEN 372
Query: 267 GFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTF 326
G +D+A ++ M K D TY IHG C N+A ++ E+ G DV +
Sbjct: 373 GKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAY 432
Query: 327 NVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMES 386
I+D LCK +++EAS L++ M GV N+ + L+ G R+ A M
Sbjct: 433 ASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGK 492
Query: 387 MGCKHTVFSY 396
GC+ TV SY
Sbjct: 493 NGCRPTVVSY 502
Score = 138 bits (347), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 148/289 (51%), Gaps = 6/289 (2%)
Query: 108 TSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGR 167
T++ + L + + L + + + S+G D+Y Y +I+C CK R+ ++
Sbjct: 395 TTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKE 454
Query: 168 ILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGH 227
+ + ++ +LI GL +SR+ EA+ ++ GC+P V++Y+ LI GLC+ G
Sbjct: 455 MSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGK 514
Query: 228 TIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPD 287
A +EM NG KP+ TY+ ++ GLC++ +D A EL+ Q + D
Sbjct: 515 FGEASAFVKEMLE-NG-----WKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETD 568
Query: 288 VVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLE 347
V+ +N LIHG C ++A ++ M + ++VT+N +M+ K G + A+ +
Sbjct: 569 VMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWG 628
Query: 348 LMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
M G+ P+ +++T+M G C+ V++A E F + G TV+++
Sbjct: 629 YMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTW 677
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 138/290 (47%), Gaps = 6/290 (2%)
Query: 107 LTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLG 166
+ S+N+L L + D +++ + + G D TY I I+ C G V+ V+
Sbjct: 359 IVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQ 418
Query: 167 RILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTG 226
+ S D A+ S+I LC + R+ EA+ L ++ G + N + LI GL R
Sbjct: 419 EVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDS 478
Query: 227 HTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINP 286
A EM GK G C+P V+Y +I GLCK G +A +M + P
Sbjct: 479 RLGEASFFLREM----GKNG--CRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKP 532
Query: 287 DVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLL 346
D+ TY+ L+ G C + A L + + G++ DV+ N+++ LC GK+D+A ++
Sbjct: 533 DLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVM 592
Query: 347 ELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
M R N T++TLM+GF G N A ++ M MG + + SY
Sbjct: 593 ANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISY 642
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 122/257 (47%), Gaps = 6/257 (2%)
Query: 109 SFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 168
++ + CL K K + +L K ++ G+ + + N LI + R+ L +
Sbjct: 431 AYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREM 490
Query: 169 LRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHT 228
++ P V++ LI GLC + EA+A ++ G KP++ TYS L+ GLCR
Sbjct: 491 GKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKI 550
Query: 229 IVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDV 288
+AL L+ + + + + + +I GLC G +D A + M+ +N ++
Sbjct: 551 DLALELWHQFLQSG------LETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANL 604
Query: 289 VTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLEL 348
VTYN+L+ GF D N A + M G+QPD++++N IM LC + A +
Sbjct: 605 VTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDD 664
Query: 349 MILRGVNPNTSTFSTLM 365
G+ P T++ L+
Sbjct: 665 ARNHGIFPTVYTWNILV 681
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 94/193 (48%), Gaps = 6/193 (3%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVV 164
P + S+N+L L K + + K + G PDL TY+IL+ C+ ++ +
Sbjct: 497 PTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALEL 556
Query: 165 LGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCR 224
+ L+S D + LI GLC+ ++ +A + ++ C N++TY+TL+ G +
Sbjct: 557 WHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFK 616
Query: 225 TGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNI 284
G + A ++ M K G+ +P+ ++Y TI+ GLC V A E F ++ I
Sbjct: 617 VGDSNRATVIWGYMY----KMGL--QPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGI 670
Query: 285 NPDVVTYNSLIHG 297
P V T+N L+
Sbjct: 671 FPTVYTWNILVRA 683
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 101/209 (48%), Gaps = 5/209 (2%)
Query: 173 FTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVAL 232
+ AV + +++ L + + + +++ CK + ++I + AL
Sbjct: 39 YAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQAL 98
Query: 233 NLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYN 292
++F+ M G C+P +Y T+++ + K + LF + + P++ TYN
Sbjct: 99 DVFKRMREIFG-----CEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYN 153
Query: 293 SLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILR 352
LI C ++ +A L M +G +PDV +++ ++++L K GK+D+A L + M R
Sbjct: 154 VLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSER 213
Query: 353 GVNPNTSTFSTLMDGFCLTGRVNHAKELF 381
GV P+ + ++ L+DGF A EL+
Sbjct: 214 GVAPDVTCYNILIDGFLKEKDHKTAMELW 242
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 1/149 (0%)
Query: 249 CKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDK-NINPDVVTYNSLIHGFCYANDWNEA 307
CK + ++I K D+A ++F +M++ P + +YN+L++ F A W +
Sbjct: 74 CKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKV 133
Query: 308 NCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDG 367
L GV P++ T+NV++ CK + ++A L+ M G P+ ++ST+++
Sbjct: 134 ESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVIND 193
Query: 368 FCLTGRVNHAKELFVSMESMGCKHTVFSY 396
G+++ A ELF M G V Y
Sbjct: 194 LAKAGKLDDALELFDEMSERGVAPDVTCY 222
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 51/112 (45%)
Query: 111 NLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILR 170
N+L L D +++ + +L TYN L+ F K+G + V+ G + +
Sbjct: 573 NILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYK 632
Query: 171 SCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGL 222
PD +++ +++KGLC + A F + G P V T++ L+ +
Sbjct: 633 MGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850, chloroplastic
OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 159 bits (401), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 158/321 (49%), Gaps = 43/321 (13%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR------- 157
P L ++NLL G L + + +F ++ STG PD+ TYN L++ + K G+
Sbjct: 783 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842
Query: 158 -------------VSHGFVVLGRILRSC----------------FTPDAVAFTSLIKGLC 188
++H V+ G + F+P A + LI GL
Sbjct: 843 YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902
Query: 189 AESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVV 248
R+ EA LF + +GC+PN Y+ LING + G A LF+ M K GV
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV----KEGV- 957
Query: 249 CKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEAN 308
+P+ TY+ ++D LC G VD+ F ++K+ +NPDVV YN +I+G ++ EA
Sbjct: 958 -RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016
Query: 309 CLLIEM-MDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDG 367
L EM +G+ PD+ T+N ++ L G ++EA ++ + G+ PN TF+ L+ G
Sbjct: 1017 VLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1076
Query: 368 FCLTGRVNHAKELFVSMESMG 388
+ L+G+ HA ++ +M + G
Sbjct: 1077 YSLSGKPEHAYAVYQTMVTGG 1097
Score = 152 bits (385), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 155/335 (46%), Gaps = 34/335 (10%)
Query: 93 IFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 152
+F+ M R P +T LL + + D+V + + G PD+ T+ IL++
Sbjct: 315 VFEKMKTGRHKPDRVTYITLL-DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDAL 373
Query: 153 CKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNV 212
CK G F L + P+ + +LI GL R+ +A LF +++ G KP
Sbjct: 374 CKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTA 433
Query: 213 ITYSTLINGLCRTGHTIVALNLFEEMAN-------------------------------G 241
TY I+ ++G ++ AL FE+M G
Sbjct: 434 YTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYG 493
Query: 242 NGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYA 301
G+V P++VTY ++ K G +D+A +L +M + PDV+ NSLI+ A
Sbjct: 494 LKDIGLV--PDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKA 551
Query: 302 NDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTF 361
+ +EA + + M + ++P VVT+N ++ L KNGK+ EA L E M+ +G PNT TF
Sbjct: 552 DRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITF 611
Query: 362 STLMDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 396
+TL D C V A ++ M MGC VF+Y
Sbjct: 612 NTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTY 646
Score = 152 bits (385), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 135/267 (50%), Gaps = 6/267 (2%)
Query: 130 FKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCA 189
+++ G + Y+YN LI+ K + V R++ F P ++SL+ GL
Sbjct: 176 LRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGK 235
Query: 190 ESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVC 249
I L +++ G KPNV T++ I L R G A + + M + C
Sbjct: 236 RRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG------C 289
Query: 250 KPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANC 309
P+ VTYT +ID LC +D AKE+F +MK PD VTY +L+ F D +
Sbjct: 290 GPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQ 349
Query: 310 LLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFC 369
EM G PDVVTF +++D LCK G EA L++M +G+ PN T++TL+ G
Sbjct: 350 FWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLL 409
Query: 370 LTGRVNHAKELFVSMESMGCKHTVFSY 396
R++ A ELF +MES+G K T ++Y
Sbjct: 410 RVHRLDDALELFGNMESLGVKPTAYTY 436
Score = 141 bits (355), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 158/338 (46%), Gaps = 18/338 (5%)
Query: 61 KDRASLEQFLKERCKSSGQGDITAITP-----------NEAFCIFDYMLNMRPSPPPLTS 109
+D S++QF E K D+ T EAF D M + + P L +
Sbjct: 342 RDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRD-QGILPNLHT 400
Query: 110 FNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRIL 169
+N L L + D L LF + S G+ P YTY + I+ + K G ++
Sbjct: 401 YNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMK 460
Query: 170 RSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHTI 229
P+ VA + + L R EA +F LK G P+ +TY+ ++ + G
Sbjct: 461 TKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEID 520
Query: 230 VALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVV 289
A+ L EM NG C+P+ + ++I+ L K VD+A ++F++MK+ + P VV
Sbjct: 521 EAIKLLSEMME-NG-----CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574
Query: 290 TYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELM 349
TYN+L+ G EA L M+ +G P+ +TFN + D LCKN ++ A ++L M
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Query: 350 ILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESM 387
+ G P+ T++T++ G G+V A F M+ +
Sbjct: 635 MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL 672
Score = 136 bits (342), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 147/300 (49%), Gaps = 7/300 (2%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA ++ M+ + P L +++ L L K + D+V+ L K + + GL P++YT+ I
Sbjct: 206 EAMEVYRRMI-LEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTIC 264
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGC 208
I + G+++ + +L R+ PD V +T LI LC ++ A +F K+K
Sbjct: 265 IRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH 324
Query: 209 KPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGF 268
KP+ +TY TL++ + EM K G V P+ VT+T ++D LCK G
Sbjct: 325 KPDRVTYITLLDRFSDNRDLDSVKQFWSEME----KDGHV--PDVVTFTILVDALCKAGN 378
Query: 269 VDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNV 328
+A + M+D+ I P++ TYN+LI G + ++A L M GV+P T+ V
Sbjct: 379 FGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIV 438
Query: 329 IMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMG 388
+D K+G A E M +G+ PN + + GR AK++F ++ +G
Sbjct: 439 FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG 498
Score = 125 bits (313), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 134/280 (47%), Gaps = 6/280 (2%)
Query: 109 SFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSHGFVVLGRI 168
S+N L L K++ + +++R+ G P L TY+ L+ K + +L +
Sbjct: 190 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 249
Query: 169 LRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLINGLCRTGHT 228
P+ FT I+ L +I EA + ++ GC P+V+TY+ LI+ LC
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL 309
Query: 229 IVALNLFEEMANGNGKFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDV 288
A +FE+M G K P+ VTY T++D +D K+ + +M+ PDV
Sbjct: 310 DCAKEVFEKMKTGRHK------PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDV 363
Query: 289 VTYNSLIHGFCYANDWNEANCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLEL 348
VT+ L+ C A ++ EA L M DQG+ P++ T+N ++ L + ++D+A L
Sbjct: 364 VTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGN 423
Query: 349 MILRGVNPNTSTFSTLMDGFCLTGRVNHAKELFVSMESMG 388
M GV P T+ +D + +G A E F M++ G
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKG 463
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 118/247 (47%), Gaps = 5/247 (2%)
Query: 80 GDITAITPNEAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLF 139
G + A ++A ++ +++ R P ++ L L+K+ LF+ + G
Sbjct: 864 GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCR 923
Query: 140 PDLYTYNILINCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAAL 199
P+ YNILIN F K G + R+++ PD ++ L+ LC R+ E
Sbjct: 924 PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 983
Query: 200 FTKLKAFGCKPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGKFGVVCKPNTVTYTTI 259
F +LK G P+V+ Y+ +INGL ++ AL LF EM G P+ TY ++
Sbjct: 984 FKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRG-----ITPDLYTYNSL 1038
Query: 260 IDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEANCLLIEMMDQGV 319
I L G V++A +++ +++ + P+V T+N+LI G+ + A + M+ G
Sbjct: 1039 ILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGF 1098
Query: 320 QPDVVTF 326
P+ T+
Sbjct: 1099 SPNTGTY 1105
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%)
Query: 248 VCKPNTVTYTTIIDGLCKEGFVDKAKELFLQMKDKNINPDVVTYNSLIHGFCYANDWNEA 307
+ K +T TY TI L +G + +A +M++ + +YN LIH + EA
Sbjct: 148 IIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEA 207
Query: 308 NCLLIEMMDQGVQPDVVTFNVIMDELCKNGKMDEASRLLELMILRGVNPNTSTFSTLMDG 367
+ M+ +G +P + T++ +M L K +D LL+ M G+ PN TF+ +
Sbjct: 208 MEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRV 267
Query: 368 FCLTGRVNHAKELFVSMESMGCKHTVFSY 396
G++N A E+ M+ GC V +Y
Sbjct: 268 LGRAGKINEAYEILKRMDDEGCGPDVVTY 296
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 105 PPLTSFNLLFGCLAKTKHYDTVLSLFKRLN-STGLFPDLYTYNILINCFCKMGRVSHGFV 163
P + +NL+ L K+ + L LF + S G+ PDLYTYN LI G V
Sbjct: 994 PDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGK 1053
Query: 164 VLGRILRSCFTPDAVAFTSLIKGLCAESRIMEAAALFTKLKAFGCKPNVITYSTLIN 220
+ I R+ P+ F +LI+G + A A++ + G PN TY L N
Sbjct: 1054 IYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 43/95 (45%)
Query: 89 EAFCIFDYMLNMRPSPPPLTSFNLLFGCLAKTKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA +F+ M R P L ++N L L + ++ + GL P+++T+N L
Sbjct: 1014 EALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNAL 1073
Query: 149 INCFCKMGRVSHGFVVLGRILRSCFTPDAVAFTSL 183
I + G+ H + V ++ F+P+ + L
Sbjct: 1074 IRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 139,768,759
Number of Sequences: 539616
Number of extensions: 5566126
Number of successful extensions: 27821
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 18092
Number of HSP's gapped (non-prelim): 3065
length of query: 396
length of database: 191,569,459
effective HSP length: 120
effective length of query: 276
effective length of database: 126,815,539
effective search space: 35001088764
effective search space used: 35001088764
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 62 (28.5 bits)