Your job contains 1 sequence.
>041820
MVKEKILGPPENGLLVKELIPVAHDVFAARTELLACVTRVAKSIAIYTCSLCGEVHVGHP
PHKIRTCNVAGSLASKEHSWKLGNVEHILSHVESFHLYDRIGRAVSHNERLQVDQIPAVN
ELCIQAGIDIPQYPTRRRVFPAYNLAGKVIDFEKRFPKEDRSSEGIETFGFWGNRKKSSE
ENKSIDVNADEAQAVAVRGMETWGKMRSGISKLMQKYAVQTCGYCPEVQVGPKGHRVRNC
QAYKHQMRDGQHAWQEATVDDLVPPVYVWHVQDPKSGKPLVNELKRYYGMLPAVVELFAQ
AGAKVSCDYTGLMRED
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 041820
(316 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2156151 - symbol:APO3 "ACCUMULATION OF PHOTOSY... 748 4.0e-74 1
TAIR|locus:2010906 - symbol:APO1 "ACCUMULATION OF PHOTOSY... 652 6.0e-64 1
TAIR|locus:2093069 - symbol:APO4 "AT3G21740" species:3702... 255 1.6e-43 2
>TAIR|locus:2156151 [details] [associations]
symbol:APO3 "ACCUMULATION OF PHOTOSYSTEM ONE 3"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR023342 Pfam:PF05634 PROSITE:PS51499 GO:GO:0005739
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003723 EMBL:AB022212
EMBL:AF370553 EMBL:BT002086 IPI:IPI00524364 RefSeq:NP_001119475.1
RefSeq:NP_568945.2 UniGene:At.55672 UniGene:At.7885
EnsemblPlants:AT5G61930.1 EnsemblPlants:AT5G61930.2 GeneID:836314
KEGG:ath:AT5G61930 TAIR:At5g61930 eggNOG:NOG286945
HOGENOM:HOG000239455 InParanoid:Q9FH50 OMA:SMMRLDV PhylomeDB:Q9FH50
ProtClustDB:PLN00111 Genevestigator:Q9FH50 GermOnline:AT5G61930
Uniprot:Q9FH50
Length = 402
Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
Identities = 148/312 (47%), Positives = 199/312 (63%)
Query: 9 PPENGLLVKELIPVAHDVFAARTELLACVTRVAKSIAIYTCSLCGEVHVGHPPHKIRTCN 68
PP+NGLLV EL+ VAH V R LL+ ++++ + ++ C LC EVH+G H+IRTC
Sbjct: 88 PPDNGLLVPELVDVAHCVHRCRNMLLSGLSKIIHHVPVHRCRLCAEVHIGKQGHEIRTCT 147
Query: 69 VAGSLA-SKEHSWKLGNVEHILSHVESFHLYDR-IGRAVSHNERLQVDQIPAVNELCIQA 126
GS + S H WK G V ++ + FHLYDR + V H+ER V +I AV ELCIQA
Sbjct: 148 GPGSGSRSATHVWKRGRVSDVVLFPKCFHLYDRAVKPRVIHDERFTVPKISAVLELCIQA 207
Query: 127 GIDIPQYPTRRRVFPAYNLAGKVIDFEKRFPKEDRSSE--GIETFGFWGNRKKSSEENKS 184
G+D+ ++P++RR P Y++ G+++DFE D +SE T + EE KS
Sbjct: 208 GVDLEKFPSKRRSKPVYSIEGRIVDFED---VNDGNSELAVTSTTTLIQEDDRCKEEKKS 264
Query: 185 IDVNADEAQAVAVRGMETWGKMRSGISKLMQKYAVQTCGYCPEVQVGPKGHRVRNCQAYK 244
+ + ++ ME+W +M G+ KLM++Y V TCGYCPE+QVGPKGH+VR C+A K
Sbjct: 265 L-------KELSFETMESWFEMVLGVRKLMERYRVWTCGYCPEIQVGPKGHKVRMCKATK 317
Query: 245 HQMRDGQHAWQEATVDDLVPPVYVWHVQDPKSGKPLVNELKRYYGMLPAVVELFAQAGAK 304
HQMRDG HAWQEAT+DD+V P YVWHV+DP G L N LKR+YG PAV+E+ Q GA
Sbjct: 318 HQMRDGMHAWQEATIDDVVGPTYVWHVRDPTDGSVLDNSLKRFYGKAPAVIEMCVQGGAP 377
Query: 305 VSCDYTGLMRED 316
V Y +MR D
Sbjct: 378 VPDQYNSMMRLD 389
>TAIR|locus:2010906 [details] [associations]
symbol:APO1 "ACCUMULATION OF PHOTOSYSTEM ONE 1"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009658 "chloroplast organization" evidence=IMP] [GO:0015979
"photosynthesis" evidence=IMP] [GO:0000373 "Group II intron
splicing" evidence=IMP] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0010468
"regulation of gene expression" evidence=IMP] InterPro:IPR023342
Pfam:PF05634 PROSITE:PS51499 EMBL:CP002684 GO:GO:0009507
GO:GO:0008270 GO:GO:0009658 GO:GO:0003723 GO:GO:0010468
GO:GO:0015979 GO:GO:0000373 IPI:IPI00657498 RefSeq:NP_001031234.1
UniGene:At.28084 EnsemblPlants:AT1G64810.2 GeneID:842789
KEGG:ath:AT1G64810 OMA:GYCSEVH Uniprot:F4I896
Length = 460
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 130/317 (41%), Positives = 187/317 (58%)
Query: 4 EKILGPPENGLLVKELIPVAHDVFAARTELLACVTRVAKSIAIYTCSLCGEVHVGHPPHK 63
EK L PP+NGLLV L+PVA V L+ + ++ + ++ CS CG VHV + H
Sbjct: 135 EKQLDPPKNGLLVPNLVPVADQVIDNWKLLIKGLAQLLHVVPVFACSECGAVHVANVGHN 194
Query: 64 IRTCN-VAGSLASKEHSWKLGNVEHILSHVESFHLYDRIGRAVSHNERLQVDQIPAVNEL 122
IR CN S HSW G + +L VES+H+YD GR + H R + ++IPA+ EL
Sbjct: 195 IRDCNGPTNSQRRGSHSWVKGTINDVLIPVESYHMYDPFGRRIKHETRFEYERIPALVEL 254
Query: 123 CIQAGIDIPQYPTRRRVFPAYNLAGKVID---FEKRFPKEDRSSEGIETFGFWGNRKKSS 179
CIQAG++IP+YP RRR P + +VID + K P++ ++S + +
Sbjct: 255 CIQAGVEIPEYPCRRRTQPIRMMGKRVIDRGGYHKE-PEKPQTSSSLSSP--LAELDTLG 311
Query: 180 EENKSIDVNADEAQAVAVRGMETWGKMRSGISKLMQKYAVQTCGYCPEVQVGPKGHRVRN 239
+ ++ +A M+ + K+R G++KLM+K+ V+ CGYC EV VGP GH V+
Sbjct: 312 VFERYPPPTPEDIPKIAQETMDAYEKVRLGVTKLMRKFTVKACGYCSEVHVGPWGHSVKL 371
Query: 240 CQAYKHQMRDGQHAWQEATVDDLVPPVYVWHVQDPKSGKPLVNELKRYYGMLPAVVELFA 299
C +KHQ RDG+H WQ+A VD++ PP YVWHV+D K G PL L+R+YG PA+VE+
Sbjct: 372 CGEFKHQWRDGKHGWQDALVDEVFPPNYVWHVRDLK-GNPLTGNLRRFYGKAPALVEICM 430
Query: 300 QAGAKVSCDYTGLMRED 316
+GA+V Y +MR D
Sbjct: 431 HSGARVPQRYKAMMRLD 447
>TAIR|locus:2093069 [details] [associations]
symbol:APO4 "AT3G21740" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR023342 Pfam:PF05634
PROSITE:PS51499 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003723 EMBL:AB025634
HOGENOM:HOG000239455 ProtClustDB:PLN00111 EMBL:AK117492
IPI:IPI00528990 RefSeq:NP_188811.2 UniGene:At.38002 STRING:Q9LSZ0
PRIDE:Q9LSZ0 EnsemblPlants:AT3G21740.1 GeneID:821728
KEGG:ath:AT3G21740 TAIR:At3g21740 eggNOG:NOG236236
InParanoid:Q9LSZ0 OMA:GHKARLC PhylomeDB:Q9LSZ0
Genevestigator:Q9LSZ0 GermOnline:AT3G21740 Uniprot:Q9LSZ0
Length = 337
Score = 255 (94.8 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
Identities = 53/141 (37%), Positives = 79/141 (56%)
Query: 174 NRKKSSEENKSIDVNADEAQAVAVRGMETWGKMRSGISKLMQKYAVQTCGYCPEVQVGPK 233
N + S E+ +S+ A + + V + W K+R+G+ KL+ Y + C C EV VGP
Sbjct: 183 NPQISEEDIRSLP--AGDLKYVGANALMAWEKVRAGVKKLLLVYPSKVCKRCKEVHVGPS 240
Query: 234 GHRVRNCQAYKHQMRDGQHAWQEATVDDLVPPVYVWHVQDPKSGKPLVNELKRYYGMLPA 293
GH+ R C +K++ G H W++A V+DLVP VWH + P+ LV+E + YYG PA
Sbjct: 241 GHKARLCGVFKYESWRGTHYWEKAGVNDLVPEKMVWH-RRPQDPVVLVDEGRSYYGHAPA 299
Query: 294 VVELFAQAGAKVSCDYTGLMR 314
+V L + GA V Y M+
Sbjct: 300 IVSLCSHTGAIVPVKYACKMK 320
Score = 221 (82.9 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
Identities = 44/118 (37%), Positives = 64/118 (54%)
Query: 16 VKELIPVAHDVFAARTELLACVTRVAKSIAIYTCSLCGEVHVGHPPHKIRTCNVAGSLAS 75
VKE++PVA ++ AR L++ + + K + TC C EV VG H I TC +
Sbjct: 55 VKEIVPVAEEILIARKNLISNIAALLKVFPVLTCKFCSEVFVGKEGHLIETCRSYIRRGN 114
Query: 76 KE-HSWKLGNVEHILSHVESFHLYDRIGRAVSHNERLQVDQIPAVNELCIQAGIDIPQ 132
H W G++ IL VES+HL++ + H ER D++PA+ ELC QAG P+
Sbjct: 115 NRLHEWVPGSINDILVPVESYHLHNISQGVIRHQERFDYDRVPAILELCCQAGAIHPE 172
Score = 177 (67.4 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 38/124 (30%), Positives = 68/124 (54%)
Query: 181 ENKSIDVNADEAQAVAVRGMETWGKMRSGISKLMQKYAVQTCGYCPEVQVGPKGHRVRNC 240
EN++ D E VA + + S I+ L++ + V TC +C EV VG +GH + C
Sbjct: 47 ENRAKDYPVKEIVPVAEEILIARKNLISNIAALLKVFPVLTCKFCSEVFVGKEGHLIETC 106
Query: 241 QAYKHQMRDGQHAWQEATVDDLVPPVYVWHVQDPKSGKPLVNELKRY-YGMLPAVVELFA 299
++Y + + H W +++D++ PV +H+ + G ++ +R+ Y +PA++EL
Sbjct: 107 RSYIRRGNNRLHEWVPGSINDILVPVESYHLHNISQG--VIRHQERFDYDRVPAILELCC 164
Query: 300 QAGA 303
QAGA
Sbjct: 165 QAGA 168
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.417 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 316 316 0.00082 116 3 11 22 0.39 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 613 (65 KB)
Total size of DFA: 246 KB (2132 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.64u 0.12s 25.76t Elapsed: 00:00:01
Total cpu time: 25.64u 0.12s 25.76t Elapsed: 00:00:01
Start: Sat May 11 06:48:48 2013 End: Sat May 11 06:48:49 2013