BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041821
(736 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/317 (35%), Positives = 159/317 (50%), Gaps = 43/317 (13%)
Query: 435 DVPSSLEEGYQALSSQFRRFSYAELKKSTKSF--KEELGRGGSGAVYKGVLADGRAVAVK 492
DVP+ EE + Q +RFS EL+ ++ +F K LGRGG G VYKG LADG VAVK
Sbjct: 11 DVPA--EEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVK 68
Query: 493 RLGD--LHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQS----LDK 546
RL + GE F EV I H NL+R+ GFC RLL+Y Y+ S L +
Sbjct: 69 RLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE 128
Query: 547 HLFSSYFLGWKERFKVALGTAKGLAYLHH-------------------DEFEPKIADFGL 587
S L W +R ++ALG+A+GLAYLH +EFE + DFGL
Sbjct: 129 RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 188
Query: 588 AKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIR---LSN 644
AKL + +RGT G++APE+ S + K DV+ YGV++LE++ G R L+
Sbjct: 189 AKLMDY-KDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLAR 247
Query: 645 WVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCV 704
+D +K ++E K +E +VD L+G + + LI + + C
Sbjct: 248 LANDDDVMLLDWVKGLLKEKK----------LEALVDVDLQGNYKDEEVEQLIQVALLCT 297
Query: 705 DEDRSKRPTMDSVVQSL 721
+RP M VV+ L
Sbjct: 298 QSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 113/317 (35%), Positives = 158/317 (49%), Gaps = 43/317 (13%)
Query: 435 DVPSSLEEGYQALSSQFRRFSYAELKKSTKSF--KEELGRGGSGAVYKGVLADGRAVAVK 492
DVP+ EE + Q +RFS EL+ ++ +F K LGRGG G VYKG LADG VAVK
Sbjct: 3 DVPA--EEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVK 60
Query: 493 RLGD--LHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQS----LDK 546
RL + GE F EV I H NL+R+ GFC RLL+Y Y+ S L +
Sbjct: 61 RLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE 120
Query: 547 HLFSSYFLGWKERFKVALGTAKGLAYLH-------------------HDEFEPKIADFGL 587
S L W +R ++ALG+A+GLAYLH +EFE + DFGL
Sbjct: 121 RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 180
Query: 588 AKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIR---LSN 644
AKL + +RG G++APE+ S + K DV+ YGV++LE++ G R L+
Sbjct: 181 AKLMDY-KDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLAR 239
Query: 645 WVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCV 704
+D +K ++E K +E +VD L+G + + LI + + C
Sbjct: 240 LANDDDVMLLDWVKGLLKEKK----------LEALVDVDLQGNYKDEEVEQLIQVALLCT 289
Query: 705 DEDRSKRPTMDSVVQSL 721
+RP M VV+ L
Sbjct: 290 QSSPMERPKMSEVVRML 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 139/304 (45%), Gaps = 56/304 (18%)
Query: 453 RFSYAELKKSTKSFKEE--LGRGGSGAVYKGVLADGRAVAVKR-LGDLHQGEEVFWAEVS 509
R +L+++T +F + +G G G VYKGVL DG VA+KR + QG E F E+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYF----LGWKERFKVALG 565
T+ H +LV + GFC E +LIY+Y+E +L +HL+ S + W++R ++ +G
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 566 TAKGLAYLH----------------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGY 609
A+GL YLH + F PKI DFG++K + ++GT GY
Sbjct: 148 AARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGY 207
Query: 610 MAPEWASNLPITAKVDVYSYGVVILEMV------------KGIRLSNWVVEDGEGQEAEL 657
+ PE+ +T K DVYS+GVV+ E++ + + L+ W VE
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES-------- 259
Query: 658 KRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSV 717
+E+IVDP L K + C+ RP+M V
Sbjct: 260 -------------HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
Query: 718 VQSL 721
+ L
Sbjct: 307 LWKL 310
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 139/304 (45%), Gaps = 56/304 (18%)
Query: 453 RFSYAELKKSTKSFKEE--LGRGGSGAVYKGVLADGRAVAVKR-LGDLHQGEEVFWAEVS 509
R +L+++T +F + +G G G VYKGVL DG VA+KR + QG E F E+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYF----LGWKERFKVALG 565
T+ H +LV + GFC E +LIY+Y+E +L +HL+ S + W++R ++ +G
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 566 TAKGLAYLH----------------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGY 609
A+GL YLH + F PKI DFG++K + ++GT GY
Sbjct: 148 AARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGY 207
Query: 610 MAPEWASNLPITAKVDVYSYGVVILEMV------------KGIRLSNWVVEDGEGQEAEL 657
+ PE+ +T K DVYS+GVV+ E++ + + L+ W VE
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES-------- 259
Query: 658 KRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSV 717
+E+IVDP L K + C+ RP+M V
Sbjct: 260 -------------HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
Query: 718 VQSL 721
+ L
Sbjct: 307 LWKL 310
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 151/307 (49%), Gaps = 45/307 (14%)
Query: 449 SQFRRFSYAELKKSTKSFKE--------ELGRGGSGAVYKGVLADGRAVAVKRLGDL--- 497
++F FS+ ELK T +F E ++G GG G VYKG + + VAVK+L +
Sbjct: 10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDI 68
Query: 498 --HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF---SSY 552
+ ++ F E+ + K H NLV + GF S+G L+Y Y+ SL L +
Sbjct: 69 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 128
Query: 553 FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSN 596
L W R K+A G A G+ +LH + F KI+DFGLA+ S++ +
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 597 SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAE 656
+ S+I GT YMAPE A IT K D+YS+GVV+LE++ G+ + E +E +
Sbjct: 189 TVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD------EHREPQ 241
Query: 657 LKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDS 716
L ++E E +I D ++ +T+ A + + C+ E ++KRP +
Sbjct: 242 LLLDIKEEIEDEEKTIEDYI----DKKMNDADSTSVEA-MYSVASQCLHEKKNKRPDIKK 296
Query: 717 VVQSLLE 723
V Q L E
Sbjct: 297 VQQLLQE 303
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 150/307 (48%), Gaps = 45/307 (14%)
Query: 449 SQFRRFSYAELKKSTKSFKE--------ELGRGGSGAVYKGVLADGRAVAVKRLGDL--- 497
++F FS+ ELK T +F E ++G GG G VYKG + + VAVK+L +
Sbjct: 10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDI 68
Query: 498 --HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF---SSY 552
+ ++ F E+ + K H NLV + GF S+G L+Y Y+ SL L +
Sbjct: 69 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 128
Query: 553 FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSN 596
L W R K+A G A G+ +LH + F KI+DFGLA+ S++ +
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 597 SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAE 656
+ +I GT YMAPE A IT K D+YS+GVV+LE++ G+ + E +E +
Sbjct: 189 TVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD------EHREPQ 241
Query: 657 LKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDS 716
L ++E E +I D ++ +T+ A + + C+ E ++KRP +
Sbjct: 242 LLLDIKEEIEDEEKTIEDYI----DKKMNDADSTSVEA-MYSVASQCLHEKKNKRPDIKK 296
Query: 717 VVQSLLE 723
V Q L E
Sbjct: 297 VQQLLQE 303
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 149/307 (48%), Gaps = 45/307 (14%)
Query: 449 SQFRRFSYAELKKSTKSFKE--------ELGRGGSGAVYKGVLADGRAVAVKRLGDL--- 497
++F FS+ ELK T +F E ++G GG G VYKG + + VAVK+L +
Sbjct: 4 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDI 62
Query: 498 --HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF---SSY 552
+ ++ F E+ + K H NLV + GF S+G L+Y Y+ SL L +
Sbjct: 63 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 122
Query: 553 FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSN 596
L W R K+A G A G+ +LH + F KI+DFGLA+ S++ +
Sbjct: 123 PLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 182
Query: 597 SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAE 656
+I GT YMAPE A IT K D+YS+GVV+LE++ G+ + E +E +
Sbjct: 183 XVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD------EHREPQ 235
Query: 657 LKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDS 716
L ++E E +I D ++ +T+ A + + C+ E ++KRP +
Sbjct: 236 LLLDIKEEIEDEEKTIEDYI----DKKMNDADSTSVEA-MYSVASQCLHEKKNKRPDIKK 290
Query: 717 VVQSLLE 723
V Q L E
Sbjct: 291 VQQLLQE 297
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 142/307 (46%), Gaps = 45/307 (14%)
Query: 449 SQFRRFSYAELKKSTKSFKE--------ELGRGGSGAVYKGVLADGRAVAVKRLGDL--- 497
++F FS+ ELK T +F E + G GG G VYKG + + VAVK+L +
Sbjct: 1 TRFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDI 59
Query: 498 --HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF---SSY 552
+ ++ F E+ K H NLV + GF S+G L+Y Y SL L +
Sbjct: 60 TTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP 119
Query: 553 FLGWKERFKVALGTAKGLAYLHHDE----------------FEPKIADFGLAKLSQRGSN 596
L W R K+A G A G+ +LH + F KI+DFGLA+ S++ +
Sbjct: 120 PLSWHXRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 179
Query: 597 SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAE 656
S+I GT Y APE A IT K D+YS+GVV+LE++ G+ + E +E +
Sbjct: 180 XVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD------EHREPQ 232
Query: 657 LKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDS 716
L ++E E +I+ + ++ + C+ E ++KRP +
Sbjct: 233 LLLDIKEEIEDEEKTIEDYID-----KKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKK 287
Query: 717 VVQSLLE 723
V Q L E
Sbjct: 288 VQQLLQE 294
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 456 YAELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGE-EVFWAEVSTIGKI 514
Y E++ S +G G G VYKG AV + ++ D + + F EV+ + K
Sbjct: 30 YWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKT 89
Query: 515 YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--SSYFLGWKERFKVALGTAKGLAY 572
H+N++ G+ ++ + ++ ++ E SL KHL + F + + +A TA+G+ Y
Sbjct: 90 RHVNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETKFQMF-QLIDIARQTAQGMDY 147
Query: 573 LH----------------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE--- 613
LH H+ KI DFGLA + R S S Q Q G+ +MAPE
Sbjct: 148 LHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIR 207
Query: 614 WASNLPITAKVDVYSYGVVILEMVKG 639
N P + + DVYSYG+V+ E++ G
Sbjct: 208 MQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 96/195 (49%), Gaps = 26/195 (13%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRL---GDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
+ +G G G VYKG VAVK L Q + F EV + K H+N++ G
Sbjct: 18 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYF-LGWKERFKVALGTAKGLAYLH--------- 574
+ ++ + ++ ++ E SL HL +S K+ +A TA+G+ YLH
Sbjct: 76 YSTKPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDL 134
Query: 575 -------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE---WASNLPITAKV 624
H++ KI DFGLA + R S S QF Q+ G+ +MAPE + P + +
Sbjct: 135 KSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 194
Query: 625 DVYSYGVVILEMVKG 639
DVY++G+V+ E++ G
Sbjct: 195 DVYAFGIVLYELMTG 209
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 95/195 (48%), Gaps = 26/195 (13%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRL---GDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
+ +G G G VYKG VAVK L Q + F EV + K H+N++ G
Sbjct: 30 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYF-LGWKERFKVALGTAKGLAYLH--------- 574
+ ++ + ++ ++ E SL HL +S K+ +A TA+G+ YLH
Sbjct: 88 YSTKPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDL 146
Query: 575 -------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE---WASNLPITAKV 624
H++ KI DFGLA R S S QF Q+ G+ +MAPE + P + +
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 206
Query: 625 DVYSYGVVILEMVKG 639
DVY++G+V+ E++ G
Sbjct: 207 DVYAFGIVLYELMTG 221
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 93/195 (47%), Gaps = 26/195 (13%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRL---GDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
+ +G G G VYKG VAVK L Q + F EV + K H+N++ G
Sbjct: 30 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYF-LGWKERFKVALGTAKGLAYLH--------- 574
+ S ++ ++ E SL HL +S K+ +A TA+G+ YLH
Sbjct: 88 Y-STAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDL 146
Query: 575 -------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE---WASNLPITAKV 624
H++ KI DFGLA R S S QF Q+ G+ +MAPE + P + +
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 206
Query: 625 DVYSYGVVILEMVKG 639
DVY++G+V+ E++ G
Sbjct: 207 DVYAFGIVLYELMTG 221
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 95/206 (46%), Gaps = 28/206 (13%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRL---GDLHQGEEVFWAEVSTIGKI 514
E+ + + +G G G VYKG VAVK L Q + F EV + K
Sbjct: 4 EIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 515 YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL--FSSYFLGWKERFKVALGTAKGLAY 572
H+N++ G+ S ++ ++ E SL HL + F K +A TA+G+ Y
Sbjct: 62 RHVNILLFMGY-STAPQLAIVTQWCEGSSLYHHLHIIETKFEMIK-LIDIARQTAQGMDY 119
Query: 573 LH----------------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE--- 613
LH H++ KI DFGLA + R S S QF Q+ G+ +MAPE
Sbjct: 120 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 614 WASNLPITAKVDVYSYGVVILEMVKG 639
P + + DVY++G+V+ E++ G
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTG 205
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 28/196 (14%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRL---GDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
+ +G G G VYKG VAVK L Q + F EV + K H+N++ G
Sbjct: 19 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHL--FSSYFLGWKERFKVALGTAKGLAYLH-------- 574
+ ++ + ++ ++ E SL HL + F K +A TA+G+ YLH
Sbjct: 77 YSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIK-LIDIARQTAQGMDYLHAKSIIHRD 134
Query: 575 --------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE---WASNLPITAK 623
H++ KI DFGLA + R S S QF Q+ G+ +MAPE P + +
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 624 VDVYSYGVVILEMVKG 639
DVY++G+V+ E++ G
Sbjct: 195 SDVYAFGIVLYELMTG 210
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 28/196 (14%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRL---GDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
+ +G G G VYKG VAVK L Q + F EV + K H+N++ G
Sbjct: 41 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHL--FSSYFLGWKERFKVALGTAKGLAYLH-------- 574
+ ++ + ++ ++ E SL HL + F K +A TA+G+ YLH
Sbjct: 99 YSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIK-LIDIARQTAQGMDYLHAKSIIHRD 156
Query: 575 --------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE---WASNLPITAK 623
H++ KI DFGLA + R S S QF Q+ G+ +MAPE P + +
Sbjct: 157 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 216
Query: 624 VDVYSYGVVILEMVKG 639
DVY++G+V+ E++ G
Sbjct: 217 SDVYAFGIVLYELMTG 232
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 28/196 (14%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRL---GDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
+ +G G G VYKG VAVK L Q + F EV + K H+N++ G
Sbjct: 14 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHL--FSSYFLGWKERFKVALGTAKGLAYLH-------- 574
+ ++ + ++ ++ E SL HL + F K +A TA+G+ YLH
Sbjct: 72 YSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIK-LIDIARQTAQGMDYLHAKSIIHRD 129
Query: 575 --------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE---WASNLPITAK 623
H++ KI DFGLA + R S S QF Q+ G+ +MAPE P + +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 624 VDVYSYGVVILEMVKG 639
DVY++G+V+ E++ G
Sbjct: 190 SDVYAFGIVLYELMTG 205
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 28/196 (14%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRL---GDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
+ +G G G VYKG VAVK L Q + F EV + K H+N++ G
Sbjct: 16 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHL--FSSYFLGWKERFKVALGTAKGLAYLH-------- 574
+ ++ + ++ ++ E SL HL + F K +A TA+G+ YLH
Sbjct: 74 YSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIK-LIDIARQTAQGMDYLHAKSIIHRD 131
Query: 575 --------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE---WASNLPITAK 623
H++ KI DFGLA + R S S QF Q+ G+ +MAPE P + +
Sbjct: 132 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 191
Query: 624 VDVYSYGVVILEMVKG 639
DVY++G+V+ E++ G
Sbjct: 192 SDVYAFGIVLYELMTG 207
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 28/196 (14%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRL---GDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
+ +G G G VYKG VAVK L Q + F EV + K H+N++ G
Sbjct: 19 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHL--FSSYFLGWKERFKVALGTAKGLAYLH-------- 574
+ ++ + ++ ++ E SL HL + F K +A TA+G+ YLH
Sbjct: 77 YSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIK-LIDIARQTAQGMDYLHAKSIIHRD 134
Query: 575 --------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE---WASNLPITAK 623
H++ KI DFGLA + R S S QF Q+ G+ +MAPE P + +
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 624 VDVYSYGVVILEMVKG 639
DVY++G+V+ E++ G
Sbjct: 195 SDVYAFGIVLYELMTG 210
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 28/196 (14%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRL---GDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
+ +G G G VYKG VAVK L Q + F EV + K H+N++ G
Sbjct: 42 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHL--FSSYFLGWKERFKVALGTAKGLAYLH-------- 574
+ ++ + ++ ++ E SL HL + F K +A TA+G+ YLH
Sbjct: 100 YSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIK-LIDIARQTAQGMDYLHAKSIIHRD 157
Query: 575 --------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE---WASNLPITAK 623
H++ KI DFGLA + R S S QF Q+ G+ +MAPE P + +
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 624 VDVYSYGVVILEMVKG 639
DVY++G+V+ E++ G
Sbjct: 218 SDVYAFGIVLYELMTG 233
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 93/196 (47%), Gaps = 28/196 (14%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRL---GDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
+ +G G G VYKG VAVK L Q + F EV + K H+N++ G
Sbjct: 14 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHL--FSSYFLGWKERFKVALGTAKGLAYLH-------- 574
+ ++ + ++ ++ E SL HL + F K +A TA+G+ YLH
Sbjct: 72 YSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIK-LIDIARQTAQGMDYLHAKSIIHRD 129
Query: 575 --------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE---WASNLPITAK 623
H++ KI DFGLA R S S QF Q+ G+ +MAPE P + +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 624 VDVYSYGVVILEMVKG 639
DVY++G+V+ E++ G
Sbjct: 190 SDVYAFGIVLYELMTG 205
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 93/196 (47%), Gaps = 28/196 (14%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRL---GDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
+ +G G G VYKG VAVK L Q + F EV + K H+N++ G
Sbjct: 34 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHL--FSSYFLGWKERFKVALGTAKGLAYLH-------- 574
+ ++ + ++ ++ E SL HL + F K +A TA+G+ YLH
Sbjct: 92 YSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIK-LIDIARQTAQGMDYLHAKSIIHRD 149
Query: 575 --------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE---WASNLPITAK 623
H++ KI DFGLA R S S QF Q+ G+ +MAPE P + +
Sbjct: 150 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 209
Query: 624 VDVYSYGVVILEMVKG 639
DVY++G+V+ E++ G
Sbjct: 210 SDVYAFGIVLYELMTG 225
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 29/197 (14%)
Query: 465 SFKEELGRGGSGAVYKGVLADGRAVAVKRL--GDLHQGEEV--FWAEVSTIGKIYHMNLV 520
+ KE++G G G V++ G VAVK L D H E V F EV+ + ++ H N+V
Sbjct: 40 NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFH-AERVNEFLREVAIMKRLRHPNIV 97
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS---YFLGWKERFKVALGTAKGLAYLHH-- 575
G ++ + ++ EY+ + SL + L S L + R +A AKG+ YLH+
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 576 ----------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
++ K+ DFGL++L SS+ + GT +MAPE + P
Sbjct: 158 PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA--GTPEWMAPEVLRDEP 215
Query: 620 ITAKVDVYSYGVVILEM 636
K DVYS+GV++ E+
Sbjct: 216 SNEKSDVYSFGVILWEL 232
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 93/196 (47%), Gaps = 28/196 (14%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRL---GDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
+ +G G G VYKG VAVK L Q + F EV + K H+N++ G
Sbjct: 42 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHL--FSSYFLGWKERFKVALGTAKGLAYLH-------- 574
+ ++ + ++ ++ E SL HL + F K +A TA+G+ YLH
Sbjct: 100 YSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIK-LIDIARQTAQGMDYLHAKSIIHRD 157
Query: 575 --------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE---WASNLPITAK 623
H++ KI DFGLA R S S QF Q+ G+ +MAPE P + +
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 624 VDVYSYGVVILEMVKG 639
DVY++G+V+ E++ G
Sbjct: 218 SDVYAFGIVLYELMTG 233
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 29/197 (14%)
Query: 465 SFKEELGRGGSGAVYKGVLADGRAVAVKRL--GDLHQGEEV--FWAEVSTIGKIYHMNLV 520
+ KE++G G G V++ G VAVK L D H E V F EV+ + ++ H N+V
Sbjct: 40 NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFH-AERVNEFLREVAIMKRLRHPNIV 97
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS---YFLGWKERFKVALGTAKGLAYLHH-- 575
G ++ + ++ EY+ + SL + L S L + R +A AKG+ YLH+
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 576 ----------------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
++ K+ DFGL++L S+ + GT +MAPE + P
Sbjct: 158 PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAA--GTPEWMAPEVLRDEP 215
Query: 620 ITAKVDVYSYGVVILEM 636
K DVYS+GV++ E+
Sbjct: 216 SNEKSDVYSFGVILWEL 232
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + T E LG G +G V+ G VAVK L + F AE + + ++ H
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--SSYFLGWKERFKVALGTAKGLA---- 571
LVR++ ++ +I EY+E SL L S L + +A A+G+A
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 572 --YLHH----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
Y+H D KIADFGLA+L + +++ K + APE +
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIK-WTAPEAINYGT 186
Query: 620 ITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+V R+
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRI 209
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + T E LG G G V+ G VAVK L + F AE + + ++ H
Sbjct: 5 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 64
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--SSYFLGWKERFKVALGTAKGLA---- 571
LVR++ ++ +I EY+E SL L S L + +A A+G+A
Sbjct: 65 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 123
Query: 572 --YLHH----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D KIADFGLA+L + ++++ G K + APE +
Sbjct: 124 RNYIHRNLRAANILVSDTLSCKIADFGLARLIE----DNEYTAREGAKFPIKWTAPEAIN 179
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+V R+
Sbjct: 180 YGTFTIKSDVWSFGILLTEIVTHGRI 205
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + T E LG G G V+ G VAVK L + F AE + + ++ H
Sbjct: 4 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 63
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--SSYFLGWKERFKVALGTAKGLA---- 571
LVR++ ++ +I EY+E SL L S L + +A A+G+A
Sbjct: 64 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 122
Query: 572 --YLHH----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D KIADFGLA+L + ++++ G K + APE +
Sbjct: 123 RNYIHRDLRAANILVSDTLSCKIADFGLARLIE----DNEYTAREGAKFPIKWTAPEAIN 178
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+V R+
Sbjct: 179 YGTFTIKSDVWSFGILLTEIVTHGRI 204
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + T E LG G G V+ G VAVK L + F AE + + ++ H
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 74
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--SSYFLGWKERFKVALGTAKGLA---- 571
LVR++ ++ +I EY+E SL L S L + +A A+G+A
Sbjct: 75 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 572 --YLHH----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D KIADFGLA+L + ++++ G K + APE +
Sbjct: 134 RNYIHRDLRAANILVSDTLSCKIADFGLARLIE----DNEYTAREGAKFPIKWTAPEAIN 189
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+V R+
Sbjct: 190 YGTFTIKSDVWSFGILLTEIVTHGRI 215
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + T E LG G G V+ G VAVK L + F AE + + ++ H
Sbjct: 14 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 73
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--SSYFLGWKERFKVALGTAKGLA---- 571
LVR++ ++ +I EY+E SL L S L + +A A+G+A
Sbjct: 74 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 132
Query: 572 --YLHH----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D KIADFGLA+L + ++++ G K + APE +
Sbjct: 133 RNYIHRDLRAANILVSDTLSCKIADFGLARLIE----DNEYTAREGAKFPIKWTAPEAIN 188
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+V R+
Sbjct: 189 YGTFTIKSDVWSFGILLTEIVTHGRI 214
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + T E LG G G V+ G VAVK L + F AE + + ++ H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--SSYFLGWKERFKVALGTAKGLA---- 571
LVR++ ++ +I EY+E SL L S L + +A A+G+A
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 572 --YLHH----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D KIADFGLA+L + ++++ G K + APE +
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIE----DNEYTAREGAKFPIKWTAPEAIN 183
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+V R+
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVTHGRI 209
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + T E LG G G V+ G VAVK L + F AE + + ++ H
Sbjct: 19 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 78
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--SSYFLGWKERFKVALGTAKGLA---- 571
LVR++ ++ +I EY+E SL L S L + +A A+G+A
Sbjct: 79 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 137
Query: 572 --YLHH----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D KIADFGLA+L + ++++ G K + APE +
Sbjct: 138 RNYIHRDLRAANILVSDTLSCKIADFGLARLIE----DNEYTAREGAKFPIKWTAPEAIN 193
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+V R+
Sbjct: 194 YGTFTIKSDVWSFGILLTEIVTHGRI 219
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + T E LG G G V+ G VAVK L + F AE + + ++ H
Sbjct: 18 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 77
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL--FSSYFLGWKERFKVALGTAKGLA---- 571
LVR++ ++ +I EY+E SL L S L + +A A+G+A
Sbjct: 78 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 136
Query: 572 --YLHH----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D KIADFGLA+L + +++ G K + APE +
Sbjct: 137 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR----EGAKFPIKWTAPEAIN 192
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+V R+
Sbjct: 193 YGTFTIKSDVWSFGILLTEIVTHGRI 218
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + T E LG G G V+ G VAVK L + F AE + + ++ H
Sbjct: 11 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 70
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--SSYFLGWKERFKVALGTAKGLA---- 571
LVR++ ++ +I EY+E SL L S L + +A A+G+A
Sbjct: 71 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 129
Query: 572 --YLHH----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D KIADFGLA+L + +++ G K + APE +
Sbjct: 130 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR----EGAKFPIKWTAPEAIN 185
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+V R+
Sbjct: 186 YGTFTIKSDVWSFGILLTEIVTHGRI 211
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + T E LG G G V+ G VAVK L + F AE + + ++ H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--SSYFLGWKERFKVALGTAKGLA---- 571
LVR++ ++ +I EY+E SL L S L + +A A+G+A
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 572 --YLHH----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D KIADFGLA+L + +++ G K + APE +
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR----EGAKFPIKWTAPEAIN 183
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+V R+
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVTHGRI 209
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + T E LG G G V+ G VAVK L + F AE + + ++ H
Sbjct: 10 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 69
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--SSYFLGWKERFKVALGTAKGLA---- 571
LVR++ ++ +I EY+E SL L S L + +A A+G+A
Sbjct: 70 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 128
Query: 572 --YLHH----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D KIADFGLA+L + +++ G K + APE +
Sbjct: 129 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR----EGAKFPIKWTAPEAIN 184
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+V R+
Sbjct: 185 YGTFTIKSDVWSFGILLTEIVTHGRI 210
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + T E LG G G V+ G VAVK L + F AE + + ++ H
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 74
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL--FSSYFLGWKERFKVALGTAKGLA---- 571
LVR++ ++ +I EY+E SL L S L + +A A+G+A
Sbjct: 75 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 572 --YLHH----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D KIADFGLA+L + +++ G K + APE +
Sbjct: 134 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR----EGAKFPIKWTAPEAIN 189
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+V R+
Sbjct: 190 YGTFTIKSDVWSFGILLTEIVTHGRI 215
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + T E LG G G V+ G VAVK L + F AE + + ++ H
Sbjct: 17 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 76
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL--FSSYFLGWKERFKVALGTAKGLA---- 571
LVR++ ++ +I EY+E SL L S L + +A A+G+A
Sbjct: 77 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 135
Query: 572 --YLHH----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D KIADFGLA+L + +++ G K + APE +
Sbjct: 136 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR----EGAKFPIKWTAPEAIN 191
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+V R+
Sbjct: 192 YGTFTIKSDVWSFGILLTEIVTHGRI 217
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + T E LG G G V+ G VAVK L + F AE + + ++ H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--SSYFLGWKERFKVALGTAKGLA---- 571
LVR++ ++ +I EY+E SL L S L + +A A+G+A
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 572 --YLHH----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D KIADFGLA+L + +++ G K + APE +
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR----EGAKFPIKWTAPEAIN 183
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+V R+
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVTHGRI 209
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 24/198 (12%)
Query: 459 LKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMN 518
+ S +F +E+G G G V+ G + VA+K + + EE F E + K+ H
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPK 63
Query: 519 LVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKER-FKVALGTAKGLAYLH--- 574
LV+++G C E L++E++E L +L + L E + L +G+AYL
Sbjct: 64 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 123
Query: 575 --HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWASNL 618
H + K++DFG+ + Q++ GTK + +PE S
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVL----DDQYTSSTGTKFPVKWASPEVFSFS 179
Query: 619 PITAKVDVYSYGVVILEM 636
++K DV+S+GV++ E+
Sbjct: 180 RYSSKSDVWSFGVLMWEV 197
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 24/198 (12%)
Query: 459 LKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMN 518
+ S +F +E+G G G V+ G + VA+K + + EE F E + K+ H
Sbjct: 7 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPK 66
Query: 519 LVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKER-FKVALGTAKGLAYLH--- 574
LV+++G C E L++E++E L +L + L E + L +G+AYL
Sbjct: 67 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 126
Query: 575 --HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWASNL 618
H + K++DFG+ + Q++ GTK + +PE S
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVL----DDQYTSSTGTKFPVKWASPEVFSFS 182
Query: 619 PITAKVDVYSYGVVILEM 636
++K DV+S+GV++ E+
Sbjct: 183 RYSSKSDVWSFGVLMWEV 200
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 24/198 (12%)
Query: 459 LKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMN 518
+ S +F +E+G G G V+ G + VA+K + + EE F E + K+ H
Sbjct: 2 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPK 61
Query: 519 LVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKER-FKVALGTAKGLAYLH--- 574
LV+++G C E L++E++E L +L + L E + L +G+AYL
Sbjct: 62 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 121
Query: 575 --HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWASNL 618
H + K++DFG+ + Q++ GTK + +PE S
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVL----DDQYTSSTGTKFPVKWASPEVFSFS 177
Query: 619 PITAKVDVYSYGVVILEM 636
++K DV+S+GV++ E+
Sbjct: 178 RYSSKSDVWSFGVLMWEV 195
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 24/198 (12%)
Query: 459 LKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMN 518
+ S +F +E+G G G V+ G + VA+K + + EE F E + K+ H
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPK 63
Query: 519 LVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKER-FKVALGTAKGLAYLH--- 574
LV+++G C E L++E++E L +L + L E + L +G+AYL
Sbjct: 64 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAS 123
Query: 575 --HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWASNL 618
H + K++DFG+ + Q++ GTK + +PE S
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVL----DDQYTSSTGTKFPVKWASPEVFSFS 179
Query: 619 PITAKVDVYSYGVVILEM 636
++K DV+S+GV++ E+
Sbjct: 180 RYSSKSDVWSFGVLMWEV 197
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 23/190 (12%)
Query: 469 ELGRGGSGAV-YKGVLADGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGF 525
++G G +G V V + G+ VAVK++ DL Q E+ + EV + H N+V M+
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKM-DLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 85
Query: 526 CSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFEP 580
G ++ E++E +L + + + ++ V L + L+ LH H + +
Sbjct: 86 YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 144
Query: 581 -----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSY 629
K++DFG +Q + + GT +MAPE S LP +VD++S
Sbjct: 145 DSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSL 202
Query: 630 GVVILEMVKG 639
G++++EMV G
Sbjct: 203 GIMVIEMVDG 212
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 23/190 (12%)
Query: 469 ELGRGGSGAV-YKGVLADGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGF 525
++G G +G V V + G+ VAVK++ DL Q E+ + EV + H N+V M+
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKM-DLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 94
Query: 526 CSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFEP 580
G ++ E++E +L + + + ++ V L + L+ LH H + +
Sbjct: 95 YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 153
Query: 581 -----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSY 629
K++DFG +Q + + GT +MAPE S LP +VD++S
Sbjct: 154 DSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSL 211
Query: 630 GVVILEMVKG 639
G++++EMV G
Sbjct: 212 GIMVIEMVDG 221
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 23/190 (12%)
Query: 469 ELGRGGSGAV-YKGVLADGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGF 525
++G G +G V V + G+ VAVK++ DL Q E+ + EV + H N+V M+
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKM-DLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 216
Query: 526 CSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFEP 580
G ++ E++E +L + + + ++ V L + L+ LH H + +
Sbjct: 217 YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 275
Query: 581 -----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSY 629
K++DFG +Q + + GT +MAPE S LP +VD++S
Sbjct: 276 DSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSL 333
Query: 630 GVVILEMVKG 639
G++++EMV G
Sbjct: 334 GIMVIEMVDG 343
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 23/190 (12%)
Query: 469 ELGRGGSGAV-YKGVLADGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGF 525
++G G +G V V + G+ VAVK++ DL Q E+ + EV + H N+V M+
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKM-DLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 96
Query: 526 CSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFEP 580
G ++ E++E +L + + + ++ V L + L+ LH H + +
Sbjct: 97 YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 155
Query: 581 -----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSY 629
K++DFG +Q + + GT +MAPE S LP +VD++S
Sbjct: 156 DSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSL 213
Query: 630 GVVILEMVKG 639
G++++EMV G
Sbjct: 214 GIMVIEMVDG 223
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 23/190 (12%)
Query: 469 ELGRGGSGAV-YKGVLADGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGF 525
++G G +G V V + G+ VAVK++ DL Q E+ + EV + H N+V M+
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKM-DLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 89
Query: 526 CSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFEP 580
G ++ E++E +L + + + ++ V L + L+ LH H + +
Sbjct: 90 YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 148
Query: 581 -----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSY 629
K++DFG +Q + + GT +MAPE S LP +VD++S
Sbjct: 149 DSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSL 206
Query: 630 GVVILEMVKG 639
G++++EMV G
Sbjct: 207 GIMVIEMVDG 216
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 24/198 (12%)
Query: 459 LKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMN 518
+ S +F +E+G G G V+ G + VA+K + + E+ F E + K+ H
Sbjct: 24 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPK 83
Query: 519 LVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKER-FKVALGTAKGLAYLH--- 574
LV+++G C E L++E++E L +L + L E + L +G+AYL
Sbjct: 84 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 143
Query: 575 --HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWASNL 618
H + K++DFG+ + Q++ GTK + +PE S
Sbjct: 144 VIHRDLAARNCLVGENQVIKVSDFGMTRFVL----DDQYTSSTGTKFPVKWASPEVFSFS 199
Query: 619 PITAKVDVYSYGVVILEM 636
++K DV+S+GV++ E+
Sbjct: 200 RYSSKSDVWSFGVLMWEV 217
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 23/190 (12%)
Query: 469 ELGRGGSGAV-YKGVLADGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGF 525
++G G +G V V + G+ VAVK++ DL Q E+ + EV + H N+V M+
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKM-DLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 139
Query: 526 CSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFEP 580
G ++ E++E +L + + + ++ V L + L+ LH H + +
Sbjct: 140 YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 198
Query: 581 -----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSY 629
K++DFG +Q + + GT +MAPE S LP +VD++S
Sbjct: 199 DSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSL 256
Query: 630 GVVILEMVKG 639
G++++EMV G
Sbjct: 257 GIMVIEMVDG 266
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 24/198 (12%)
Query: 459 LKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMN 518
+ S +F +E+G G G V+ G + VA+K + + EE F E + K+ H
Sbjct: 5 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPK 64
Query: 519 LVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKER-FKVALGTAKGLAYLH--- 574
LV+++G C E L+ E++E L +L + L E + L +G+AYL
Sbjct: 65 LVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 124
Query: 575 --HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWASNL 618
H + K++DFG+ + Q++ GTK + +PE S
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVL----DDQYTSSTGTKFPVKWASPEVFSFS 180
Query: 619 PITAKVDVYSYGVVILEM 636
++K DV+S+GV++ E+
Sbjct: 181 RYSSKSDVWSFGVLMWEV 198
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 23/190 (12%)
Query: 469 ELGRGGSGAVYKGVLAD-GRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGF 525
++G G +G V G+ VAVK++ DL Q E+ + EV + +H N+V M+
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKM-DLRKQQRRELLFNEVVIMRDYHHDNVVDMYSS 110
Query: 526 CSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFEP 580
G ++ E++E +L + + + ++ V L + L+YLH H + +
Sbjct: 111 YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKS 169
Query: 581 -----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSY 629
K++DFG +Q + + GT +MAPE S LP +VD++S
Sbjct: 170 DSILLTSDGRIKLSDFGFC--AQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSL 227
Query: 630 GVVILEMVKG 639
G++++EM+ G
Sbjct: 228 GIMVIEMIDG 237
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 129/315 (40%), Gaps = 74/315 (23%)
Query: 449 SQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKR--LGDLHQGE---- 501
S+F + L + +++++G+GG G V+KG L D VA+K LGD +GE
Sbjct: 6 SEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGD-SEGETEMI 64
Query: 502 ---EVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF-SSYFLGWK 557
+ F EV + + H N+V+++G ++ E+V L L ++ + W
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWS 122
Query: 558 ERFKVALGTAKGLAYLHH--------------------DEFEP---KIADFGLAKLSQRG 594
+ ++ L A G+ Y+ + DE P K+ADFG LSQ+
Sbjct: 123 VKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG---LSQQS 179
Query: 595 SNSSQFSQIRGTKGYMAPEW--ASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEG 652
+S S + G +MAPE A T K D YS+ +++ + + GEG
Sbjct: 180 VHS--VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMIL-----------YTILTGEG 226
Query: 653 QEAELK----RFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDR 708
E +F+ ++ + L I E PRL+ C D
Sbjct: 227 PFDEYSYGKIKFINMIREEGL---RPTIPEDCPPRLRNVIEL------------CWSGDP 271
Query: 709 SKRPTMDSVVQSLLE 723
KRP +V+ L E
Sbjct: 272 KKRPHFSYIVKELSE 286
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 33/227 (14%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVL--ADGR---AVAVKRL--GDLHQGEEVFWAEVST 510
E+ S + ++ +G G G VYKG+L + G+ VA+K L G + F E
Sbjct: 40 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI 99
Query: 511 IGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL------FSSY-FLGWKERFKVA 563
+G+ H N++R+ G S+ + ++I EY+E +LDK L FS +G
Sbjct: 100 MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAG 159
Query: 564 LGTAKGLAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQ-----IRGTKG 608
+ + Y+H D K++DFGL+++ + ++ + IR T
Sbjct: 160 MKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWT-- 217
Query: 609 YMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEA 655
APE S T+ DV+S+G+V+ E++ W + + E +A
Sbjct: 218 --APEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKA 262
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + + +LG+G G V+ G VA+K L E F E + KI H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHE 73
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLA---- 571
LV+++ SE ++ EY+ K SL L +L + +A A G+A
Sbjct: 74 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 572 --YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D K+ADFGLA+L + ++++ +G K + APE A
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEAAL 188
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+ R+
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + + +LG+G G V+ G VA+K L E F E + K+ H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--SSYFLGWKERFKVALGTAKGLA---- 571
LV+++ SE ++ EY+ K SL L + +L + +A A G+A
Sbjct: 240 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 298
Query: 572 --YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D K+ADFGLA+L + ++++ +G K + APE A
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEAAL 354
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+ R+
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRV 380
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + + +LG+G G V+ G VA+K L E F E + K+ H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--SSYFLGWKERFKVALGTAKGLA---- 571
LV+++ SE ++ EY+ K SL L + +L + +A A G+A
Sbjct: 240 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 298
Query: 572 --YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D K+ADFGLA+L + ++++ +G K + APE A
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEAAL 354
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+ R+
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRV 380
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + + +LG+G G V+ G VA+K L E F E + K+ H
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 322
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--SSYFLGWKERFKVALGTAKGLA---- 571
LV+++ SE ++ EY+ K SL L + +L + +A A G+A
Sbjct: 323 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 381
Query: 572 --YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D K+ADFGLA+L + ++++ +G K + APE A
Sbjct: 382 MNYVHRDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEAAL 437
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+ R+
Sbjct: 438 YGRFTIKSDVWSFGILLTELTTKGRV 463
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + + +LG+G G V+ G VA+K L E F E + K+ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLA---- 571
LV+++ SE ++I EY+ K SL L +L + +A A G+A
Sbjct: 74 KLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 572 --YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D K+ADFGLA+L + ++++ +G K + APE A
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEAAL 188
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+ R+
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + + +LG+G G V+ G VA+K L E F E + K+ H
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 62
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLA---- 571
LV+++ SE ++ EY+ K SL L +L + +A A G+A
Sbjct: 63 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 121
Query: 572 --YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D K+ADFGLA+L + ++++ +G K + APE A
Sbjct: 122 MNYVHRDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEAAL 177
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+ R+
Sbjct: 178 YGRFTIKSDVWSFGILLTELTTKGRV 203
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + + +LG+G G V+ G VA+K L E F E + K+ H
Sbjct: 5 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 64
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLA---- 571
LV+++ SE ++ EY+ K SL L +L + +A A G+A
Sbjct: 65 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 123
Query: 572 --YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D K+ADFGLA+L + ++++ +G K + APE A
Sbjct: 124 MNYVHRDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEAAL 179
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+ R+
Sbjct: 180 YGRFTIKSDVWSFGILLTELTTKGRV 205
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + + +LG+G G V+ G VA+K L E F E + K+ H
Sbjct: 7 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 66
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--SSYFLGWKERFKVALGTAKGLA---- 571
LV+++ SE ++ EY+ K SL L + +L + +A A G+A
Sbjct: 67 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 125
Query: 572 --YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D K+ADFGLA+L + ++++ +G K + APE A
Sbjct: 126 MNYVHRDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEAAL 181
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+ R+
Sbjct: 182 YGRFTIKSDVWSFGILLTELTTKGRV 207
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + + +LG+G G V+ G VA+K L E F E + K+ H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--SSYFLGWKERFKVALGTAKGLA---- 571
LV+++ SE ++ EY+ K SL L + +L + +A A G+A
Sbjct: 240 KLVQLYAVVSE-EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 298
Query: 572 --YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D K+ADFGLA+L + ++++ +G K + APE A
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEAAL 354
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+ R+
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRV 380
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + + +LG+G G V+ G VA+K L + E F E + K+ H
Sbjct: 181 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHE 240
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLA---- 571
LV+++ SE ++ EY+ K SL L +L + +A A G+A
Sbjct: 241 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 299
Query: 572 --YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D K+ADFGL +L + ++++ +G K + APE A
Sbjct: 300 MNYVHRDLRAANILVGENLVCKVADFGLGRLIE----DNEYTARQGAKFPIKWTAPEAAL 355
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+ R+
Sbjct: 356 YGRFTIKSDVWSFGILLTELTTKGRV 381
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + + +LG+G G V+ G VA+K L E F E + K+ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLA---- 571
LV+++ SE ++ EY+ K SL L +L + +A A G+A
Sbjct: 74 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 572 --YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D K+ADFGLA+L + ++++ +G K + APE A
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEAAL 188
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+ R+
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + + +LG+G G V+ G VA+K L E F E + K+ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLA---- 571
LV+++ SE ++ EY+ K SL L +L + +A A G+A
Sbjct: 74 KLVQLYAVVSE-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 572 --YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D K+ADFGLA+L + ++++ +G K + APE A
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEAAL 188
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+ R+
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + + +LG+G G V+ G VA+K L E F E + K+ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLA---- 571
LV+++ SE ++I EY+ K SL L +L + +A A G+A
Sbjct: 74 KLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 572 --YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D K+ADFGLA+L + +++ +G K + APE A
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTAR----QGAKFPIKWTAPEAAL 188
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+ R+
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + + +LG+G G V+ G VA+K L E F E + K+ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLA---- 571
LV+++ SE ++ EY+ K SL L +L + +A A G+A
Sbjct: 74 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 572 --YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D K+ADFGLA+L + ++++ +G K + APE A
Sbjct: 133 MNYVHRDLAAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEAAL 188
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+ R+
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + + +LG+G G V+ G VA+K L E F E + K+ H
Sbjct: 4 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 63
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL--FSSYFLGWKERFKVALGTAKGLA---- 571
LV+++ SE ++ EY+ K SL L + +L + +A A G+A
Sbjct: 64 KLVQLYAVVSE-EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 122
Query: 572 --YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D K+ADFGLA+L + +++ +G K + APE A
Sbjct: 123 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTAR----QGAKFPIKWTAPEAAL 178
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+ R+
Sbjct: 179 YGRFTIKSDVWSFGILLTELTTKGRV 204
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 128/315 (40%), Gaps = 74/315 (23%)
Query: 449 SQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKR--LGDLHQGE---- 501
S+F + L + +++++G+GG G V+KG L D VA+K LGD +GE
Sbjct: 6 SEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGD-SEGETEMI 64
Query: 502 ---EVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF-SSYFLGWK 557
+ F EV + + H N+V+++G ++ E+V L L ++ + W
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWS 122
Query: 558 ERFKVALGTAKGLAYLHH--------------------DEFEP---KIADFGLAKLSQRG 594
+ ++ L A G+ Y+ + DE P K+ADFG SQ+
Sbjct: 123 VKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG---TSQQS 179
Query: 595 SNSSQFSQIRGTKGYMAPEW--ASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEG 652
+S S + G +MAPE A T K D YS+ +++ + + GEG
Sbjct: 180 VHS--VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMIL-----------YTILTGEG 226
Query: 653 QEAELK----RFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDR 708
E +F+ ++ + L I E PRL+ C D
Sbjct: 227 PFDEYSYGKIKFINMIREEGL---RPTIPEDCPPRLRNVIEL------------CWSGDP 271
Query: 709 SKRPTMDSVVQSLLE 723
KRP +V+ L E
Sbjct: 272 KKRPHFSYIVKELSE 286
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 31/205 (15%)
Query: 453 RFSYAELKKSTKSFKEELGRGGSGAVYKGVLADGR----AVAVKRLGD--LHQGEEVFWA 506
R+ AE + F++ LG +GA + +LA+ + VA+K + L E
Sbjct: 9 RWKQAEDIRDIYDFRDVLG---TGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN 65
Query: 507 EVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGT 566
E++ + KI H N+V + G H LI + V L + F ++ ++
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQV 125
Query: 567 AKGLAYLH-----HDEFEPK--------------IADFGLAKLSQRGSNSSQFSQIRGTK 607
+ YLH H + +P+ I+DFGL+K+ GS S GT
Sbjct: 126 LDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTP 182
Query: 608 GYMAPEWASNLPITAKVDVYSYGVV 632
GY+APE + P + VD +S GV+
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + + +LG+G G V+ G VA+K L E F E + K+ H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 70
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--SSYFLGWKERFKVALGTAKGLA---- 571
LV+++ SE ++ EY+ K SL L + +L + ++ A G+A
Sbjct: 71 KLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER 129
Query: 572 --YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D K+ADFGLA+L + ++++ +G K + APE A
Sbjct: 130 MNYVHRDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEAAL 185
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+ R+
Sbjct: 186 YGRFTIKSDVWSFGILLTELTTKGRV 211
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 128/315 (40%), Gaps = 74/315 (23%)
Query: 449 SQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLA-DGRAVAVKR--LGDLHQGE---- 501
S+F + L + +++++G+GG G V+KG L D VA+K LGD +GE
Sbjct: 6 SEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGD-SEGETEMI 64
Query: 502 ---EVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF-SSYFLGWK 557
+ F EV + + H N+V+++G ++ E+V L L ++ + W
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWS 122
Query: 558 ERFKVALGTAKGLAYLHH--------------------DEFEP---KIADFGLAKLSQRG 594
+ ++ L A G+ Y+ + DE P K+ADF LSQ+
Sbjct: 123 VKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFS---LSQQS 179
Query: 595 SNSSQFSQIRGTKGYMAPEW--ASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEG 652
+S S + G +MAPE A T K D YS+ +++ + + GEG
Sbjct: 180 VHS--VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMIL-----------YTILTGEG 226
Query: 653 QEAELK----RFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDR 708
E +F+ ++ + L I E PRL+ C D
Sbjct: 227 PFDEYSYGKIKFINMIREEGL---RPTIPEDCPPRLRNVIEL------------CWSGDP 271
Query: 709 SKRPTMDSVVQSLLE 723
KRP +V+ L E
Sbjct: 272 KKRPHFSYIVKELSE 286
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 31/205 (15%)
Query: 453 RFSYAELKKSTKSFKEELGRGGSGAVYKGVLADGR----AVAVKRLGD--LHQGEEVFWA 506
R+ AE + F++ LG +GA + +LA+ + VA+K + L E
Sbjct: 9 RWKQAEDIRDIYDFRDVLG---TGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN 65
Query: 507 EVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGT 566
E++ + KI H N+V + G H LI + V L + F ++ ++
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQV 125
Query: 567 AKGLAYLH-----HDEFEPK--------------IADFGLAKLSQRGSNSSQFSQIRGTK 607
+ YLH H + +P+ I+DFGL+K+ GS S GT
Sbjct: 126 LDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTP 182
Query: 608 GYMAPEWASNLPITAKVDVYSYGVV 632
GY+APE + P + VD +S GV+
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + + +LG+G G V+ G VA+K L E F E + K+ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLA---- 571
LV+++ SE ++ EY+ K L L +L + +A A G+A
Sbjct: 74 KLVQLYAVVSE-EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 572 --YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D K+ADFGLA+L + ++++ +G K + APE A
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEAAL 188
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+ R+
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + + +LG+G G V+ G VA+K L E F E + K+ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY--FLGWKERFKVALGTAKGLA---- 571
LV+++ SE ++ EY+ K L L +L + +A A G+A
Sbjct: 74 KLVQLYAVVSE-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 572 --YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D K+ADFGLA+L + ++++ +G K + APE A
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEAAL 188
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+ R+
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 31/205 (15%)
Query: 453 RFSYAELKKSTKSFKEELGRGGSGAVYKGVLADGR----AVAVKRLGD--LHQGEEVFWA 506
R+ AE + F++ LG +GA + +LA+ + VA+K + L E
Sbjct: 9 RWKQAEDIRDIYDFRDVLG---TGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMEN 65
Query: 507 EVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGT 566
E++ + KI H N+V + G H LI + V L + F ++ ++
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQV 125
Query: 567 AKGLAYLH-----HDEFEPK--------------IADFGLAKLSQRGSNSSQFSQIRGTK 607
+ YLH H + +P+ I+DFGL+K+ GS S GT
Sbjct: 126 LDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTP 182
Query: 608 GYMAPEWASNLPITAKVDVYSYGVV 632
GY+APE + P + VD +S GV+
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 132/316 (41%), Gaps = 67/316 (21%)
Query: 437 PSSLEEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLA----DGRAVAVK 492
P + E+ Q + +F + EL + S + +G G G V G L +VA+K
Sbjct: 25 PHTFEDPTQTVH-EFAK----ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 493 --RLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS 550
++G + F E S +G+ H N++R+ G ++ + +++ EY+E SLD
Sbjct: 80 TLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD----- 134
Query: 551 SYFLGWKERFKVA--LGTAKGLA----------YLHHD----------EFEPKIADFGLA 588
S+ +F V +G +G+A Y+H D K++DFGLA
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLA 194
Query: 589 KLSQRGSNSSQFSQIRGTK---GYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNW 645
++ + ++ + RG K + +PE + T+ DV+SYG+V+ E++ W
Sbjct: 195 RVLEDDPEAAYTT--RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 646 VVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVD 705
+ + + +A VD + + A L + + C
Sbjct: 253 EMSNQDVIKA------------------------VDEGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 706 EDRSKRPTMDSVVQSL 721
+DR+ RP + +V L
Sbjct: 289 KDRNNRPKFEQIVSIL 304
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 132/312 (42%), Gaps = 57/312 (18%)
Query: 436 VPSSLEEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLA-DGR---AVAV 491
+P + E+ QA+ +F + E++ S + + +G G G V G L G+ VA+
Sbjct: 1 MPHTYEDPNQAVH-EFAK----EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAI 55
Query: 492 K--RLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF 549
K ++G + F E S +G+ H N++ + G ++ + +++ EY+E SLD L
Sbjct: 56 KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLK 115
Query: 550 SS-------YFLGWKERFKVALGTAKGLAYLHHD----------EFEPKIADFGLAKLSQ 592
+ +G + + Y+H D K++DFGL+++ +
Sbjct: 116 KNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 175
Query: 593 RGSNSSQFSQIRGTK---GYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVED 649
++ + RG K + APE + T+ DV+SYG+V+ E+V W
Sbjct: 176 DDPEAAYTT--RGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYW---- 229
Query: 650 GEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRS 709
E + ++ V EE + RL + A L + + C ++R+
Sbjct: 230 ----EMTNQDVIKAV-------EEGY-------RLPSPMDC--PAALYQLMLDCWQKERN 269
Query: 710 KRPTMDSVVQSL 721
RP D +V L
Sbjct: 270 SRPKFDEIVNML 281
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 31/205 (15%)
Query: 453 RFSYAELKKSTKSFKEELGRGGSGAVYKGVLADGR----AVAVKRLGD--LHQGEEVFWA 506
R+ AE + F++ LG +GA + +LA+ + VA+K + L E
Sbjct: 9 RWKQAEDIRDIYDFRDVLG---TGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN 65
Query: 507 EVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGT 566
E++ + KI H N+V + G H LI + V L + F ++ ++
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQV 125
Query: 567 AKGLAYLH-----HDEFEPK--------------IADFGLAKLSQRGSNSSQFSQIRGTK 607
+ YLH H + +P+ I+DFGL+K+ GS S GT
Sbjct: 126 LDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTP 182
Query: 608 GYMAPEWASNLPITAKVDVYSYGVV 632
GY+APE + P + VD +S GV+
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + + +LG+G G V+ G VA+K L E F E + K+ H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 70
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--SSYFLGWKERFKVALGTAKGLA---- 571
LV+++ SE ++ EY+ K SL L + +L + ++ A G+A
Sbjct: 71 KLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER 129
Query: 572 --YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
Y+H D K+ADFGLA+L + ++++ +G K + APE A
Sbjct: 130 MNYVHRDLRAANILVGENLVCKVADFGLARLIE----DNEWTARQGAKFPIKWTAPEAAL 185
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+ R+
Sbjct: 186 YGRFTIKSDVWSFGILLTELTTKGRV 211
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 24/201 (11%)
Query: 456 YAELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY 515
+ ELK+ + +ELG G G V G VAVK + + E+ F+ E T+ K+
Sbjct: 2 HMELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLS 61
Query: 516 HMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS-YFLGWKERFKVALGTAKGLAYLH 574
H LV+ +G CS+ ++ EY+ L +L S L + ++ +G+A+L
Sbjct: 62 HPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE 121
Query: 575 HDEFEP----------------KIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWA 615
+F K++DFG+ R Q+ GTK + APE
Sbjct: 122 SHQFIHRDLAARNCLVDRDLCVKVSDFGMT----RYVLDDQYVSSVGTKFPVKWSAPEVF 177
Query: 616 SNLPITAKVDVYSYGVVILEM 636
++K DV+++G+++ E+
Sbjct: 178 HYFKYSSKSDVWAFGILMWEV 198
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 87/203 (42%), Gaps = 35/203 (17%)
Query: 468 EELGRGGSGAVYKGVLAD-GRAVAVKRLGDL-HQGEEVFWAEVSTIGKIYHMNLVRMWGF 525
E LG+G G K + G + +K L + + F EV + + H N+++ G
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 526 CSEGRHRLLIYEYVEKQSLD---KHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDE 577
+ + I EY++ +L K + S Y W +R A A G+AYLH H +
Sbjct: 76 LYKDKRLNFITEYIKGGTLRGIIKSMDSQY--PWSQRVSFAKDIASGMAYLHSMNIIHRD 133
Query: 578 FEPK-----------IADFGLAKL------------SQRGSNSSQFSQIRGTKGYMAPEW 614
+ADFGLA+L S + + + + G +MAPE
Sbjct: 134 LNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEM 193
Query: 615 ASNLPITAKVDVYSYGVVILEMV 637
+ KVDV+S+G+V+ E++
Sbjct: 194 INGRSYDEKVDVFSFGIVLCEII 216
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 123/292 (42%), Gaps = 56/292 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVL-ADGR---AVAVKRL--GDLHQGEEVFWAEVSTI 511
E++ S ++ +G G SG V G L G+ VA+K L G + F +E S +
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIM 104
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS-------YFLGWKERFKVAL 564
G+ H N++R+ G + GR +++ EY+E SLD L + +G +
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGM 164
Query: 565 GTAKGLAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQ-----IRGTKGY 609
L Y+H D K++DFGL+++ + +++ + IR T
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWT--- 221
Query: 610 MAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKIL 669
APE + ++ DV+S+GVV+ E++ W + + R+V +
Sbjct: 222 -APEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN------------RDVISSV- 267
Query: 670 YEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
EE + RL A L + + C +DR++RP +V L
Sbjct: 268 --EEGY-------RLPAPMGCPHA--LHQLMLDCWHKDRAQRPRFSQIVSVL 308
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 36/196 (18%)
Query: 467 KEELGRGGSGAVYKGVLADGRA--VAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
+E +GRG G V K A RA VA+K++ + + F E+ + ++ H N+V+++G
Sbjct: 14 EEVVGRGAFGVVCK---AKWRAKDVAIKQI-ESESERKAFIVELRQLSRVNHPNIVKLYG 69
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW---KERFKVALGTAKGLAYLH------- 574
C L+ EY E SL L + L + L ++G+AYLH
Sbjct: 70 ACLNPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 127
Query: 575 -HDEFEP------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT 621
H + +P KI DFG A Q + + +G+ +MAPE +
Sbjct: 128 IHRDLKPPNLLLVAGGTVLKICDFGTACDIQ-----THMTNNKGSAAWMAPEVFEGSNYS 182
Query: 622 AKVDVYSYGVVILEMV 637
K DV+S+G+++ E++
Sbjct: 183 EKCDVFSWGIILWEVI 198
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 36/196 (18%)
Query: 467 KEELGRGGSGAVYKGVLADGRA--VAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
+E +GRG G V K A RA VA+K++ + + F E+ + ++ H N+V+++G
Sbjct: 13 EEVVGRGAFGVVCK---AKWRAKDVAIKQI-ESESERKAFIVELRQLSRVNHPNIVKLYG 68
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW---KERFKVALGTAKGLAYLH------- 574
C L+ EY E SL L + L + L ++G+AYLH
Sbjct: 69 ACLNPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 126
Query: 575 -HDEFEP------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT 621
H + +P KI DFG A Q + + +G+ +MAPE +
Sbjct: 127 IHRDLKPPNLLLVAGGTVLKICDFGTACDIQ-----THMTNNKGSAAWMAPEVFEGSNYS 181
Query: 622 AKVDVYSYGVVILEMV 637
K DV+S+G+++ E++
Sbjct: 182 EKCDVFSWGIILWEVI 197
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVL-ADGR---AVAVKRL--GDLHQGEEVFWAEVSTI 511
E+ S +E +G G G V +G L A G+ VA+K L G + F +E S +
Sbjct: 10 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIM 69
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL-FSSYFLGWKERFKVALGTAKGL 570
G+ H N++R+ G + +++ E++E +LD L + + + G A G+
Sbjct: 70 GQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGM 129
Query: 571 AYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMA 611
YL H D K++DFGL++ + S+ ++ G K + A
Sbjct: 130 RYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTA 189
Query: 612 PEWASNLPITAKVDVYSYGVVILEMV 637
PE + T+ D +SYG+V+ E++
Sbjct: 190 PEAIAFRKFTSASDAWSYGIVMWEVM 215
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 24/205 (11%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMWG 524
E++G G G VYK + GR VA+KR+ + E + E+S + +++H N+V +
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVAL-GTAKGLAYLH-----HDEF 578
R L++E++EK L K L + + K+ L +G+A+ H H +
Sbjct: 87 VIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDL 145
Query: 579 EP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-WASNLPITAKVDV 626
+P K+ADFGLA+ G ++ T Y AP+ + + VD+
Sbjct: 146 KPQNLLINSDGALKLADFGLAR--AFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDI 203
Query: 627 YSYGVVILEMVKGIRLSNWVVEDGE 651
+S G + EM+ G L V +D +
Sbjct: 204 WSIGCIFAEMITGKPLFPGVTDDDQ 228
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 123/292 (42%), Gaps = 56/292 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVL-ADGR---AVAVKRL--GDLHQGEEVFWAEVSTI 511
E++ S ++ +G G SG V G L G+ VA+K L G + F +E S +
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIM 104
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS-------YFLGWKERFKVAL 564
G+ H N++R+ G + GR +++ EY+E SLD L + +G +
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGM 164
Query: 565 GTAKGLAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQ-----IRGTKGY 609
L Y+H D K++DFGL+++ + +++ + IR T
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWT--- 221
Query: 610 MAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKIL 669
APE + ++ DV+S+GVV+ E++ W + + R+V +
Sbjct: 222 -APEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN------------RDVISSV- 267
Query: 670 YEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
EE + RL A L + + C +DR++RP +V L
Sbjct: 268 --EEGY-------RLPAPMGCPHA--LHQLMLDCWHKDRAQRPRFSQIVSVL 308
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 89/206 (43%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + + LG G G V+ G VA+K L E F E + K+ H
Sbjct: 5 EIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHD 64
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--SSYFLGWKERFKVALGTAKGLAYLH- 574
LV+++ SE ++ EY+ K SL L L +A A G+AY+
Sbjct: 65 KLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER 123
Query: 575 ----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWAS 616
H + KIADFGLA+L + +++ +G K + APE A
Sbjct: 124 MNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTAR----QGAKFPIKWTAPEAAL 179
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRL 642
T K DV+S+G+++ E+V R+
Sbjct: 180 YGRFTIKSDVWSFGILLTELVTKGRV 205
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 24/205 (11%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMWG 524
E++G G G VYK + GR VA+KR+ + E + E+S + +++H N+V +
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVAL-GTAKGLAYLH-----HDEF 578
R L++E++EK L K L + + K+ L +G+A+ H H +
Sbjct: 87 VIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDL 145
Query: 579 EP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-WASNLPITAKVDV 626
+P K+ADFGLA+ G ++ T Y AP+ + + VD+
Sbjct: 146 KPQNLLINSDGALKLADFGLARAF--GIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDI 203
Query: 627 YSYGVVILEMVKGIRLSNWVVEDGE 651
+S G + EM+ G L V +D +
Sbjct: 204 WSIGCIFAEMITGKPLFPGVTDDDQ 228
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 81/198 (40%), Gaps = 25/198 (12%)
Query: 457 AELKKSTKSFKEELGRGG-SGAVYKGVLADGRAVAVKRLGD--LHQGEEVFWAEVSTIGK 513
AE K FKE LG G S V A G+ AVK + L E E++ + K
Sbjct: 17 AEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRK 76
Query: 514 IYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL 573
I H N+V + H L+ + V L + F K+ + + YL
Sbjct: 77 IKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYL 136
Query: 574 H-----HDEFEPK--------------IADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEW 614
H H + +P+ I+DFGL+K+ +G S GT GY+APE
Sbjct: 137 HRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTACGTPGYVAPEV 193
Query: 615 ASNLPITAKVDVYSYGVV 632
+ P + VD +S GV+
Sbjct: 194 LAQKPYSKAVDCWSIGVI 211
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 132/316 (41%), Gaps = 67/316 (21%)
Query: 437 PSSLEEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLA----DGRAVAVK 492
P + E+ Q + +F + EL + S + +G G G V G L +VA+K
Sbjct: 25 PHTFEDPTQTVH-EFAK----ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 493 --RLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS 550
++G + F E S +G+ H N++R+ G ++ + +++ EY+E SLD
Sbjct: 80 TLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD----- 134
Query: 551 SYFLGWKERFKVA--LGTAKGLA----------YLHHD----------EFEPKIADFGLA 588
S+ +F V +G +G+A Y+H D K++DFGL+
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 589 KLSQRGSNSSQFSQIRGTK---GYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNW 645
++ + ++ + RG K + +PE + T+ DV+SYG+V+ E++ W
Sbjct: 195 RVLEDDPEAAYTT--RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 646 VVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVD 705
+ + + +A VD + + A L + + C
Sbjct: 253 EMSNQDVIKA------------------------VDEGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 706 EDRSKRPTMDSVVQSL 721
+DR+ RP + +V L
Sbjct: 289 KDRNNRPKFEQIVSIL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 132/316 (41%), Gaps = 67/316 (21%)
Query: 437 PSSLEEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLA----DGRAVAVK 492
P + E+ Q + +F + EL + S + +G G G V G L +VA+K
Sbjct: 25 PHTFEDPTQTVH-EFAK----ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 493 --RLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS 550
++G + F E S +G+ H N++R+ G ++ + +++ EY+E SLD
Sbjct: 80 TLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD----- 134
Query: 551 SYFLGWKERFKVA--LGTAKGLA----------YLHHD----------EFEPKIADFGLA 588
S+ +F V +G +G+A Y+H D K++DFGL+
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 589 KLSQRGSNSSQFSQIRGTK---GYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNW 645
++ + ++ + RG K + +PE + T+ DV+SYG+V+ E++ W
Sbjct: 195 RVLEDDPEAAYTT--RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 646 VVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVD 705
+ + + +A VD + + A L + + C
Sbjct: 253 EMSNQDVIKA------------------------VDEGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 706 EDRSKRPTMDSVVQSL 721
+DR+ RP + +V L
Sbjct: 289 KDRNNRPKFEQIVSIL 304
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 123/295 (41%), Gaps = 62/295 (21%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLA----DGRAVAVK--RLGDLHQGEEVFWAEVSTI 511
EL + S + +G G G V G L +VA+K ++G + F E S +
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 98
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVA--LGTAKG 569
G+ H N++R+ G ++ + +++ EY+E SLD S+ +F V +G +G
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD-----SFLRKHDAQFTVIQLVGMLRG 153
Query: 570 LA----------YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK-- 607
+A Y+H D K++DFGL+++ + ++ + RG K
Sbjct: 154 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RGGKIP 211
Query: 608 -GYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKR 666
+ +PE + T+ DV+SYG+V+ E++ W + + + +A
Sbjct: 212 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA----------- 260
Query: 667 KILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
VD + + A L + + C +DR+ RP + +V L
Sbjct: 261 -------------VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 302
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 123/295 (41%), Gaps = 62/295 (21%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLA----DGRAVAVK--RLGDLHQGEEVFWAEVSTI 511
EL + S + +G G G V G L +VA+K ++G + F E S +
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVA--LGTAKG 569
G+ H N++R+ G ++ + +++ EY+E SLD S+ +F V +G +G
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD-----SFLRKHDAQFTVIQLVGMLRG 126
Query: 570 LA----------YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK-- 607
+A Y+H D K++DFGL+++ + ++ + RG K
Sbjct: 127 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RGGKIP 184
Query: 608 -GYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKR 666
+ +PE + T+ DV+SYG+V+ E++ W + + + +A
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA----------- 233
Query: 667 KILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
VD + + A L + + C +DR+ RP + +V L
Sbjct: 234 -------------VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 123/295 (41%), Gaps = 62/295 (21%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLA----DGRAVAVK--RLGDLHQGEEVFWAEVSTI 511
EL + S + +G G G V G L +VA+K ++G + F E S +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVA--LGTAKG 569
G+ H N++R+ G ++ + +++ EY+E SLD S+ +F V +G +G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD-----SFLRKHDAQFTVIQLVGMLRG 155
Query: 570 LA----------YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK-- 607
+A Y+H D K++DFGL+++ + ++ + RG K
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RGGKIP 213
Query: 608 -GYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKR 666
+ +PE + T+ DV+SYG+V+ E++ W + + + +A
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA----------- 262
Query: 667 KILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
VD + + A L + + C +DR+ RP + +V L
Sbjct: 263 -------------VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 123/295 (41%), Gaps = 62/295 (21%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLA----DGRAVAVK--RLGDLHQGEEVFWAEVSTI 511
EL + S + +G G G V G L +VA+K ++G + F E S +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVA--LGTAKG 569
G+ H N++R+ G ++ + +++ EY+E SLD S+ +F V +G +G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD-----SFLRKHDAQFTVIQLVGMLRG 155
Query: 570 LA----------YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK-- 607
+A Y+H D K++DFGL+++ + ++ + RG K
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RGGKIP 213
Query: 608 -GYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKR 666
+ +PE + T+ DV+SYG+V+ E++ W + + + +A
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA----------- 262
Query: 667 KILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
VD + + A L + + C +DR+ RP + +V L
Sbjct: 263 -------------VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 131/316 (41%), Gaps = 67/316 (21%)
Query: 437 PSSLEEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLA----DGRAVAVK 492
P + E+ Q + +F + EL + S + +G G G V G L +VA+K
Sbjct: 25 PHTFEDPTQTVH-EFAK----ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 493 --RLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS 550
++G + F E S +G+ H N++R+ G ++ + +++ EY+E SLD
Sbjct: 80 TLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD----- 134
Query: 551 SYFLGWKERFKVA--LGTAKGLA----------YLHHD----------EFEPKIADFGLA 588
S+ +F V +G +G+A Y+H D K++DFGL
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLG 194
Query: 589 KLSQRGSNSSQFSQIRGTK---GYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNW 645
++ + ++ + RG K + +PE + T+ DV+SYG+V+ E++ W
Sbjct: 195 RVLEDDPEAAYTT--RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 646 VVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVD 705
+ + + +A VD + + A L + + C
Sbjct: 253 EMSNQDVIKA------------------------VDEGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 706 EDRSKRPTMDSVVQSL 721
+DR+ RP + +V L
Sbjct: 289 KDRNNRPKFEQIVSIL 304
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 123/295 (41%), Gaps = 62/295 (21%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLA----DGRAVAVK--RLGDLHQGEEVFWAEVSTI 511
EL + S + +G G G V G L +VA+K ++G + F E S +
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 88
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVA--LGTAKG 569
G+ H N++R+ G ++ + +++ EY+E SLD S+ +F V +G +G
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD-----SFLRKHDAQFTVIQLVGMLRG 143
Query: 570 LA----------YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK-- 607
+A Y+H D K++DFGL+++ + ++ + RG K
Sbjct: 144 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RGGKIP 201
Query: 608 -GYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKR 666
+ +PE + T+ DV+SYG+V+ E++ W + + + +A
Sbjct: 202 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA----------- 250
Query: 667 KILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
VD + + A L + + C +DR+ RP + +V L
Sbjct: 251 -------------VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 292
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 130/316 (41%), Gaps = 67/316 (21%)
Query: 437 PSSLEEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLA----DGRAVAVK 492
P + E+ Q + +F + EL + S + +G G G V G L +VA+K
Sbjct: 25 PHTFEDPTQTVH-EFAK----ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 493 --RLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS 550
++G + F E S +G+ H N++R+ G ++ + +++ EY+E SLD
Sbjct: 80 TLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD----- 134
Query: 551 SYFLGWKERFKVAL------GTAKGLAYL------HHD----------EFEPKIADFGLA 588
S+ +F V G A G+ YL H D K++DFGL+
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 589 KLSQRGSNSSQFSQIRGTK---GYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNW 645
++ + ++ + RG K + +PE + T+ DV+SYG+V+ E++ W
Sbjct: 195 RVLEDDPEAAYTT--RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 646 VVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVD 705
+ + + +A VD + + A L + + C
Sbjct: 253 EMSNQDVIKA------------------------VDEGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 706 EDRSKRPTMDSVVQSL 721
+DR+ RP + +V L
Sbjct: 289 KDRNNRPKFEQIVSIL 304
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 29/193 (15%)
Query: 469 ELGRGGSGAVYKGVLA----DGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRM 522
++G G +G V LA GR VAVK + DL Q E+ + EV + H N+V M
Sbjct: 52 KIGEGSTGIV---CLAREKHSGRQVAVKMM-DLRKQQRRELLFNEVVIMRDYQHFNVVEM 107
Query: 523 WGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDE 577
+ G ++ E+++ +L + S L ++ V + LAYLH H +
Sbjct: 108 YKSYLVGEELWVLMEFLQGGAL-TDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRD 166
Query: 578 FEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDV 626
+ K++DFG +Q + + + GT +MAPE S +VD+
Sbjct: 167 IKSDSILLTLDGRVKLSDFGFC--AQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDI 224
Query: 627 YSYGVVILEMVKG 639
+S G++++EMV G
Sbjct: 225 WSLGIMVIEMVDG 237
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 86/218 (39%), Gaps = 46/218 (21%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLG---DLHQGEEVFWAEVSTIGK 513
E+ + + +E +G GG G VY+ + D AV R D+ Q E E
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAM 62
Query: 514 IYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLD-----KHLFSSYFLGWKERFKVALGTAK 568
+ H N++ + G C + + L+ E+ L+ K + + W A+ A+
Sbjct: 63 LKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIAR 116
Query: 569 GLAYLHHDEFEP---------------------------KIADFGLAKLSQRGSNSSQFS 601
G+ YLH + P KI DFGLA+ R + S
Sbjct: 117 GMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA-- 174
Query: 602 QIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
G +MAPE + DV+SYGV++ E++ G
Sbjct: 175 --AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVL-ADGR---AVAVKRL--GDLHQGEEVFWAEVSTI 511
E+ S +E +G G G V +G L A G+ VA+K L G + F +E S +
Sbjct: 12 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIM 71
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL-FSSYFLGWKERFKVALGTAKGL 570
G+ H N++R+ G + +++ E++E +LD L + + + G A G+
Sbjct: 72 GQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGM 131
Query: 571 AYL------HHD----------EFEPKIADFGLAK-LSQRGSNSSQFSQIRGTKG--YMA 611
YL H D K++DFGL++ L + S+ ++ S + G + A
Sbjct: 132 RYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTA 191
Query: 612 PEWASNLPITAKVDVYSYGVVILEMV 637
PE + T+ D +SYG+V+ E++
Sbjct: 192 PEAIAFRKFTSASDAWSYGIVMWEVM 217
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 101/249 (40%), Gaps = 51/249 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVL------ADGRAVAVKRLGDLHQ-GEEVFWAEVST 510
+K+ K ELG G G V+ D VAVK L + + + F E
Sbjct: 14 HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAEL 73
Query: 511 IGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS---------------YFLG 555
+ + H ++VR +G C+EGR L+++EY+ L++ L S LG
Sbjct: 74 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 133
Query: 556 WKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQ 599
+ VA A G+ YL H D KI DFG++ R S+
Sbjct: 134 LGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS----RDIYSTD 189
Query: 600 FSQIRGTK----GYMAPEWASNLPITAKVDVYSYGVVILEMV-----KGIRLSNWVVEDG 650
+ ++ G +M PE T + DV+S+GVV+ E+ +LSN D
Sbjct: 190 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDC 249
Query: 651 EGQEAELKR 659
Q EL+R
Sbjct: 250 ITQGRELER 258
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 91/221 (41%), Gaps = 46/221 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVL------ADGRAVAVKRLGDLHQ-GEEVFWAEVST 510
+K+ K ELG G G V+ D VAVK L + + + F E
Sbjct: 8 HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAEL 67
Query: 511 IGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS---------------YFLG 555
+ + H ++VR +G C+EGR L+++EY+ L++ L S LG
Sbjct: 68 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 127
Query: 556 WKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQ 599
+ VA A G+ YL H D KI DFG++ R S+
Sbjct: 128 LGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS----RDIYSTD 183
Query: 600 FSQIRGTK----GYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ ++ G +M PE T + DV+S+GVV+ E+
Sbjct: 184 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEI 224
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 36/203 (17%)
Query: 466 FKEELGRGGSGAVYKGVLA--DGRAV--AVKRLGDLHQGEEV--FWAEVSTIGKIYHMNL 519
F E +GRG G VY G L DG+ + AVK L + EV F E + H N+
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 520 VRMWGFC--SEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYL--- 573
+ + G C SEG L++ Y++ L + + ++ K+ L AKG+ +L
Sbjct: 92 LSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 150
Query: 574 ---HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG------YMAPEW 614
H D +F K+ADFGLA R +F + G +MA E
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLA----RDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 615 ASNLPITAKVDVYSYGVVILEMV 637
T K DV+S+GV++ E++
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELM 229
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 36/203 (17%)
Query: 466 FKEELGRGGSGAVYKGVLA--DGRAV--AVKRLGDLHQGEEV--FWAEVSTIGKIYHMNL 519
F E +GRG G VY G L DG+ + AVK L + EV F E + H N+
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 520 VRMWGFC--SEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYL--- 573
+ + G C SEG L++ Y++ L + + ++ K+ L AKG+ +L
Sbjct: 94 LSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 152
Query: 574 ---HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG------YMAPEW 614
H D +F K+ADFGLA R +F + G +MA E
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLA----RDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 615 ASNLPITAKVDVYSYGVVILEMV 637
T K DV+S+GV++ E++
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELM 231
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 36/203 (17%)
Query: 466 FKEELGRGGSGAVYKGVLA--DGRAV--AVKRLGDLHQGEEV--FWAEVSTIGKIYHMNL 519
F E +GRG G VY G L DG+ + AVK L + EV F E + H N+
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 520 VRMWGFC--SEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYL--- 573
+ + G C SEG L++ Y++ L + + ++ K+ L AKG+ +L
Sbjct: 95 LSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 153
Query: 574 ---HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG------YMAPEW 614
H D +F K+ADFGLA R +F + G +MA E
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLA----RDMYDKEFDSVHNKTGAKLPVKWMALES 209
Query: 615 ASNLPITAKVDVYSYGVVILEMV 637
T K DV+S+GV++ E++
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELM 232
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 92/212 (43%), Gaps = 45/212 (21%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMW---- 523
E +GRG GAVYKG L D R VAVK ++ + + + + H N+ R
Sbjct: 19 ELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDE 77
Query: 524 GFCSEGRHR-LLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH-----DE 577
++GR LL+ EY SL K+L S + W ++A +GLAYLH D
Sbjct: 78 RVTADGRMEYLLVMEYYPNGSLXKYL-SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDH 136
Query: 578 FEPK--------------------IADFGLA------KLSQRGSNSSQFSQIRGTKGYMA 611
++P I+DFGL+ +L + G + GT YMA
Sbjct: 137 YKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMA 196
Query: 612 PEW---ASNL----PITAKVDVYSYGVVILEM 636
PE A NL +VD+Y+ G++ E+
Sbjct: 197 PEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 36/203 (17%)
Query: 466 FKEELGRGGSGAVYKGVLA--DGRAV--AVKRLGDLHQGEEV--FWAEVSTIGKIYHMNL 519
F E +GRG G VY G L DG+ + AVK L + EV F E + H N+
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 520 VRMWGFC--SEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYL--- 573
+ + G C SEG L++ Y++ L + + ++ K+ L AKG+ +L
Sbjct: 94 LSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 152
Query: 574 ---HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG------YMAPEW 614
H D +F K+ADFGLA R +F + G +MA E
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLA----RDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 615 ASNLPITAKVDVYSYGVVILEMV 637
T K DV+S+GV++ E++
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELM 231
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 36/203 (17%)
Query: 466 FKEELGRGGSGAVYKGVLA--DGRAV--AVKRLGDLHQGEEV--FWAEVSTIGKIYHMNL 519
F E +GRG G VY G L DG+ + AVK L + EV F E + H N+
Sbjct: 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 152
Query: 520 VRMWGFC--SEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYL--- 573
+ + G C SEG L++ Y++ L + + ++ K+ L AKG+ +L
Sbjct: 153 LSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 211
Query: 574 ---HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG------YMAPEW 614
H D +F K+ADFGLA R +F + G +MA E
Sbjct: 212 KFVHRDLAARNCMLDEKFTVKVADFGLA----RDMYDKEFDSVHNKTGAKLPVKWMALES 267
Query: 615 ASNLPITAKVDVYSYGVVILEMV 637
T K DV+S+GV++ E++
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELM 290
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 36/203 (17%)
Query: 466 FKEELGRGGSGAVYKGVLA--DGRAV--AVKRLGDLHQGEEV--FWAEVSTIGKIYHMNL 519
F E +GRG G VY G L DG+ + AVK L + EV F E + H N+
Sbjct: 39 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 98
Query: 520 VRMWGFC--SEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYL--- 573
+ + G C SEG L++ Y++ L + + ++ K+ L AKG+ +L
Sbjct: 99 LSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 157
Query: 574 ---HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG------YMAPEW 614
H D +F K+ADFGLA R +F + G +MA E
Sbjct: 158 KFVHRDLAARNCMLDEKFTVKVADFGLA----RDMYDKEFDSVHNKTGAKLPVKWMALES 213
Query: 615 ASNLPITAKVDVYSYGVVILEMV 637
T K DV+S+GV++ E++
Sbjct: 214 LQTQKFTTKSDVWSFGVLLWELM 236
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 91/221 (41%), Gaps = 46/221 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVL------ADGRAVAVKRLGDLHQ-GEEVFWAEVST 510
+K+ K ELG G G V+ D VAVK L + + + F E
Sbjct: 37 HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAEL 96
Query: 511 IGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS---------------YFLG 555
+ + H ++VR +G C+EGR L+++EY+ L++ L S LG
Sbjct: 97 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 156
Query: 556 WKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQ 599
+ VA A G+ YL H D KI DFG++ R S+
Sbjct: 157 LGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS----RDIYSTD 212
Query: 600 FSQIRGTK----GYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ ++ G +M PE T + DV+S+GVV+ E+
Sbjct: 213 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEI 253
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 127/311 (40%), Gaps = 55/311 (17%)
Query: 437 PSSLEEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLA-DGRA---VAVK 492
P + E+ +A+ R F+ E+ S ++ +G G G V G L G+ VA+K
Sbjct: 13 PFTFEDPNEAV----REFA-KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIK 67
Query: 493 RL--GDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS 550
L G + F +E S +G+ H N++ + G ++ ++I E++E SLD L
Sbjct: 68 TLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ 127
Query: 551 S-------YFLGWKERFKVALGTAKGLAYLHHD----------EFEPKIADFGLAKLSQR 593
+ +G + + Y+H D K++DFGL++ +
Sbjct: 128 NDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 187
Query: 594 GSNSSQFSQIRGTK---GYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDG 650
++ ++ G K + APE T+ DV+SYG+V+ E++ W + +
Sbjct: 188 DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ 247
Query: 651 EGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSK 710
+ A IE+ D RL + A L + + C +DR+
Sbjct: 248 DVINA--------------------IEQ--DYRLPPPMDCPSA--LHQLMLDCWQKDRNH 283
Query: 711 RPTMDSVVQSL 721
RP +V +L
Sbjct: 284 RPKFGQIVNTL 294
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 37/207 (17%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + + LG G G V+ G + VAVK L + F E + + + H
Sbjct: 9 EIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD 68
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVAL--------GTAKG 569
LVR++ + +I EY+ K SL FL E KV L A+G
Sbjct: 69 KLVRLYAVVTREEPIYIITEYMAKGSLLD------FLKSDEGGKVLLPKLIDFSAQIAEG 122
Query: 570 LA------YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYM 610
+A Y+H D KIADFGLA++ + ++++ G K +
Sbjct: 123 MAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIE----DNEYTAREGAKFPIKWT 178
Query: 611 APEWASNLPITAKVDVYSYGVVILEMV 637
APE + T K DV+S+G+++ E+V
Sbjct: 179 APEAINFGCFTIKSDVWSFGILLYEIV 205
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 36/203 (17%)
Query: 466 FKEELGRGGSGAVYKGVLA--DGRAV--AVKRLGDLHQGEEV--FWAEVSTIGKIYHMNL 519
F E +GRG G VY G L DG+ + AVK L + EV F E + H N+
Sbjct: 53 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 112
Query: 520 VRMWGFC--SEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYL--- 573
+ + G C SEG L++ Y++ L + + ++ K+ L AKG+ YL
Sbjct: 113 LSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 171
Query: 574 ---HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG------YMAPEW 614
H D +F K+ADFGLA R ++ + G +MA E
Sbjct: 172 KFVHRDLAARNCMLDEKFTVKVADFGLA----RDMYDKEYYSVHNKTGAKLPVKWMALES 227
Query: 615 ASNLPITAKVDVYSYGVVILEMV 637
T K DV+S+GV++ E++
Sbjct: 228 LQTQKFTTKSDVWSFGVLLWELM 250
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 36/203 (17%)
Query: 466 FKEELGRGGSGAVYKGVLA--DGRAV--AVKRLGDLHQGEEV--FWAEVSTIGKIYHMNL 519
F E +GRG G VY G L DG+ + AVK L + EV F E + H N+
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 520 VRMWGFC--SEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYL--- 573
+ + G C SEG L++ Y++ L + + ++ K+ L AKG+ +L
Sbjct: 95 LSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 153
Query: 574 ---HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG------YMAPEW 614
H D +F K+ADFGLA R +F + G +MA E
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLA----RDMLDKEFDSVHNKTGAKLPVKWMALES 209
Query: 615 ASNLPITAKVDVYSYGVVILEMV 637
T K DV+S+GV++ E++
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELM 232
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 87/197 (44%), Gaps = 30/197 (15%)
Query: 468 EELGRGGSGAVYKGVLADGR----AVAVKRL----GDLHQGEEVFWAEVSTIGKIYHMNL 519
++LG GG VY LA+ VA+K + + + + F EV ++ H N+
Sbjct: 17 DKLGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNI 73
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH----- 574
V M E L+ EY+E +L +++ S L G+ + H
Sbjct: 74 VSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIV 133
Query: 575 HDEFEP-----------KIADFGLAK-LSQRGSNSSQFSQIRGTKGYMAPEWASNLPITA 622
H + +P KI DFG+AK LS+ ++ +Q + + GT Y +PE A
Sbjct: 134 HRDIKPQNILIDSNKTLKIFDFGIAKALSE--TSLTQTNHVLGTVQYFSPEQAKGEATDE 191
Query: 623 KVDVYSYGVVILEMVKG 639
D+YS G+V+ EM+ G
Sbjct: 192 CTDIYSIGIVLYEMLVG 208
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 26/198 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRL-GDLHQGEEV---FWAEVSTIGKIYHMNLVRM 522
E LG GG V+ L D R VAVK L DL + F E + H +V +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 523 W----GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH---- 574
+ G ++ EYV+ +L + + + K +V + L + H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGI 137
Query: 575 -HDEFEP-----------KIADFGLAK-LSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT 621
H + +P K+ DFG+A+ ++ G++ +Q + + GT Y++PE A +
Sbjct: 138 IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVD 197
Query: 622 AKVDVYSYGVVILEMVKG 639
A+ DVYS G V+ E++ G
Sbjct: 198 ARSDVYSLGCVLYEVLTG 215
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 36/203 (17%)
Query: 466 FKEELGRGGSGAVYKGVLA--DGRAV--AVKRLGDLHQGEEV--FWAEVSTIGKIYHMNL 519
F E +GRG G VY G L DG+ + AVK L + EV F E + H N+
Sbjct: 52 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 111
Query: 520 VRMWGFC--SEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYL--- 573
+ + G C SEG L++ Y++ L + + ++ K+ L AKG+ YL
Sbjct: 112 LSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 170
Query: 574 ---HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG------YMAPEW 614
H D +F K+ADFGLA R ++ + G +MA E
Sbjct: 171 KFVHRDLAARNCMLDEKFTVKVADFGLA----RDMYDKEYYSVHNKTGAKLPVKWMALES 226
Query: 615 ASNLPITAKVDVYSYGVVILEMV 637
T K DV+S+GV++ E++
Sbjct: 227 LQTQKFTTKSDVWSFGVLLWELM 249
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 26/198 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRL-GDLHQGEEV---FWAEVSTIGKIYHMNLVRM 522
E LG GG V+ L D R VAVK L DL + F E + H +V +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 523 W----GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH---- 574
+ G ++ EYV+ +L + + + K +V + L + H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGI 137
Query: 575 -HDEFEP-----------KIADFGLAK-LSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT 621
H + +P K+ DFG+A+ ++ G++ +Q + + GT Y++PE A +
Sbjct: 138 IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVD 197
Query: 622 AKVDVYSYGVVILEMVKG 639
A+ DVYS G V+ E++ G
Sbjct: 198 ARSDVYSLGCVLYEVLTG 215
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 36/203 (17%)
Query: 466 FKEELGRGGSGAVYKGVLA--DGRAV--AVKRLGDLHQGEEV--FWAEVSTIGKIYHMNL 519
F E +GRG G VY G L DG+ + AVK L + EV F E + H N+
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 520 VRMWGFC--SEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYL--- 573
+ + G C SEG L++ Y++ L + + ++ K+ L AKG+ YL
Sbjct: 94 LSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 152
Query: 574 ---HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG------YMAPEW 614
H D +F K+ADFGLA R ++ + G +MA E
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLA----RDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 615 ASNLPITAKVDVYSYGVVILEMV 637
T K DV+S+GV++ E++
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELM 231
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 36/203 (17%)
Query: 466 FKEELGRGGSGAVYKGVLA--DGRAV--AVKRLGDLHQGEEV--FWAEVSTIGKIYHMNL 519
F E +GRG G VY G L DG+ + AVK L + EV F E + H N+
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 520 VRMWGFC--SEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYL--- 573
+ + G C SEG L++ Y++ L + + ++ K+ L AKG+ YL
Sbjct: 94 LSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 152
Query: 574 ---HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG------YMAPEW 614
H D +F K+ADFGLA R ++ + G +MA E
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLA----RDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 615 ASNLPITAKVDVYSYGVVILEMV 637
T K DV+S+GV++ E++
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELM 231
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 36/203 (17%)
Query: 466 FKEELGRGGSGAVYKGVLA--DGRAV--AVKRLGDLHQGEEV--FWAEVSTIGKIYHMNL 519
F E +GRG G VY G L DG+ + AVK L + EV F E + H N+
Sbjct: 26 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 85
Query: 520 VRMWGFC--SEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYL--- 573
+ + G C SEG L++ Y++ L + + ++ K+ L AKG+ YL
Sbjct: 86 LSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 144
Query: 574 ---HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG------YMAPEW 614
H D +F K+ADFGLA R ++ + G +MA E
Sbjct: 145 KFVHRDLAARNCMLDEKFTVKVADFGLA----RDMYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 615 ASNLPITAKVDVYSYGVVILEMV 637
T K DV+S+GV++ E++
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWELM 223
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 36/203 (17%)
Query: 466 FKEELGRGGSGAVYKGVLA--DGRAV--AVKRLGDLHQGEEV--FWAEVSTIGKIYHMNL 519
F E +GRG G VY G L DG+ + AVK L + EV F E + H N+
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 520 VRMWGFC--SEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYL--- 573
+ + G C SEG L++ Y++ L + + ++ K+ L AKG+ YL
Sbjct: 93 LSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 151
Query: 574 ---HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG------YMAPEW 614
H D +F K+ADFGLA R ++ + G +MA E
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLA----RDMYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 615 ASNLPITAKVDVYSYGVVILEMV 637
T K DV+S+GV++ E++
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELM 230
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 36/203 (17%)
Query: 466 FKEELGRGGSGAVYKGVLA--DGRAV--AVKRLGDLHQGEEV--FWAEVSTIGKIYHMNL 519
F E +GRG G VY G L DG+ + AVK L + EV F E + H N+
Sbjct: 31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 90
Query: 520 VRMWGFC--SEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYL--- 573
+ + G C SEG L++ Y++ L + + ++ K+ L AKG+ YL
Sbjct: 91 LSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 149
Query: 574 ---HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG------YMAPEW 614
H D +F K+ADFGLA R ++ + G +MA E
Sbjct: 150 KFVHRDLAARNCMLDEKFTVKVADFGLA----RDMYDKEYYSVHNKTGAKLPVKWMALES 205
Query: 615 ASNLPITAKVDVYSYGVVILEMV 637
T K DV+S+GV++ E++
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELM 228
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 127/318 (39%), Gaps = 66/318 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYK----GVLADGRA--VAVKRLG-DLHQGE-EVFWAEVS 509
E ++ SF + LG G G V + G++ A VAVK L H E E +E+
Sbjct: 19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 78
Query: 510 TIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY--FLGWKERFKV---- 562
+ + HMN+V + G C+ G L+I EY L L F+ K +
Sbjct: 79 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 138
Query: 563 ------------ALGTAKGLAYL------HHDEFE----------PKIADFGLAKLSQRG 594
+ AKG+A+L H D KI DFGLA+ +
Sbjct: 139 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 198
Query: 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQE 654
SN R +MAPE N T + DV+SYG+ + E+ + S + G +
Sbjct: 199 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF-SLGSSPY---PGMPVD 254
Query: 655 AELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTM 714
++ + ++E R +L E A A + I +C D D KRPT
Sbjct: 255 SKFYKMIKEGFR-MLSPEHA------------------PAEMYDIMKTCWDADPLKRPTF 295
Query: 715 DSVVQSLLECETESEIHI 732
+VQ + + +ES HI
Sbjct: 296 KQIVQLIEKQISESTNHI 313
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 21/190 (11%)
Query: 468 EELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFC 526
E+LG G G+VYK + + G+ VA+K++ +E+ E+S + + ++V+ +G
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEII-KEISIMQQCDSPHVVKYYGSY 93
Query: 527 SEGRHRLLIYEYVEKQSL-DKHLFSSYFLGWKERFKVALGTAKGLAYLH----------- 574
+ ++ EY S+ D + L E + T KGL YLH
Sbjct: 94 FKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKA 153
Query: 575 -----HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSY 629
+ E K+ADFG+A Q ++ + + GT +MAPE + D++S
Sbjct: 154 GNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSL 211
Query: 630 GVVILEMVKG 639
G+ +EM +G
Sbjct: 212 GITAIEMAEG 221
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 36/203 (17%)
Query: 466 FKEELGRGGSGAVYKGVLA--DGRAV--AVKRLGDLHQGEEV--FWAEVSTIGKIYHMNL 519
F E +GRG G VY G L DG+ + AVK L + EV F E + H N+
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 520 VRMWGFC--SEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYL--- 573
+ + G C SEG L++ Y++ L + + ++ K+ L AKG+ YL
Sbjct: 92 LSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 150
Query: 574 ---HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG------YMAPEW 614
H D +F K+ADFGLA R ++ + G +MA E
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLA----RDMYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 615 ASNLPITAKVDVYSYGVVILEMV 637
T K DV+S+GV++ E++
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELM 229
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 96/231 (41%), Gaps = 40/231 (17%)
Query: 446 ALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYK---GVLAD--GRAVAVKRLGDLHQG 500
A+ S F + ++ F ++LG+G G+V L D G VAVK+L H
Sbjct: 25 AMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HST 82
Query: 501 EEV---FWAEVSTIGKIYHMNLVRMWGFC-SEGRHRL-LIYEYVEKQSLDKHLFSSYFLG 555
EE F E+ + + H N+V+ G C S GR L LI EY+ SL Y
Sbjct: 83 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL-----RDYLQK 137
Query: 556 WKER------FKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQR 593
KER + KG+ YL H D E KI DFGL K+ +
Sbjct: 138 HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 197
Query: 594 GSNSSQFSQIRGTKGY-MAPEWASNLPITAKVDVYSYGVVILEMVKGIRLS 643
+ + + + APE + + DV+S+GVV+ E+ I S
Sbjct: 198 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 248
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 87/198 (43%), Gaps = 26/198 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRL-GDLHQGEEV---FWAEVSTIGKIYHMNLVRM 522
E LG GG V+ L D R VAVK L DL + F E + H +V +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 523 W----GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH---- 574
+ G ++ EYV+ +L + + + K +V + L + H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGI 137
Query: 575 -HDEFEP-----------KIADFGLAK-LSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT 621
H + +P K+ DFG+A+ ++ G++ Q + + GT Y++PE A +
Sbjct: 138 IHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVD 197
Query: 622 AKVDVYSYGVVILEMVKG 639
A+ DVYS G V+ E++ G
Sbjct: 198 ARSDVYSLGCVLYEVLTG 215
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 36/203 (17%)
Query: 466 FKEELGRGGSGAVYKGVLA--DGRAV--AVKRLGDLHQGEEV--FWAEVSTIGKIYHMNL 519
F E +GRG G VY G L DG+ + AVK L + EV F E + H N+
Sbjct: 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 88
Query: 520 VRMWGFC--SEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYL--- 573
+ + G C SEG L++ Y++ L + + ++ K+ L AKG+ YL
Sbjct: 89 LSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 147
Query: 574 ---HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG------YMAPEW 614
H D +F K+ADFGLA R ++ + G +MA E
Sbjct: 148 KFVHRDLAARNCMLDEKFTVKVADFGLA----RDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 615 ASNLPITAKVDVYSYGVVILEMV 637
T K DV+S+GV++ E++
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELM 226
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
E++++ + K +LG G G VY+GV VAVK L + E F E + + +I H
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL--------FSSYFLGWKERFKVALGTAK 568
NLV++ G C+ +I E++ +L +L + L + A+ +
Sbjct: 67 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 569 GLAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
++H D K+ADFGL++L G + + + + APE +
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTXTAHAGAKFPIKWTAPESLAYN 185
Query: 619 PITAKVDVYSYGVVILEM 636
+ K DV+++GV++ E+
Sbjct: 186 KFSIKSDVWAFGVLLWEI 203
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 75/174 (43%), Gaps = 22/174 (12%)
Query: 486 GRAVAVKRLGDLHQGEEV--FWAEVSTIGKIYHMNLVRMWGFCSE--GRHRLLIYEYVEK 541
G VAVK L G + E+ + +YH N+V+ G C+E G LI E++
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 542 QSLDKHLFSSYF-LGWKERFKVALGTAKGLAYL------HHD----------EFEPKIAD 584
SL ++L + + K++ K A+ KG+ YL H D E + KI D
Sbjct: 110 GSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGD 169
Query: 585 FGLAKLSQRGSNSSQFSQIRGTKGY-MAPEWASNLPITAKVDVYSYGVVILEMV 637
FGL K + R + + APE DV+S+GV + E++
Sbjct: 170 FGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
E++++ + K +LG G G VY+GV VAVK L + E F E + + +I H
Sbjct: 10 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 69
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--------SSYFLGWKERFKVALGTAK 568
NLV++ G C+ +I E++ +L +L + L + A+ +
Sbjct: 70 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 569 GLAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
++H D K+ADFGL++L G + + + + APE +
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTXTAHAGAKFPIKWTAPESLAYN 188
Query: 619 PITAKVDVYSYGVVILEM 636
+ K DV+++GV++ E+
Sbjct: 189 KFSIKSDVWAFGVLLWEI 206
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 126/318 (39%), Gaps = 66/318 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYK----GVLADGRA--VAVKRLG-DLHQGE-EVFWAEVS 509
E ++ SF + LG G G V + G++ A VAVK L H E E +E+
Sbjct: 42 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 101
Query: 510 TIGKI-YHMNLVRMWGFCSEGRHRLLIYEY------------------VEKQSLDKHLFS 550
+ + HMN+V + G C+ G L+I EY K S
Sbjct: 102 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 161
Query: 551 SYFLGWKERFKVALGTAKGLAYL------HHDEFE----------PKIADFGLAKLSQRG 594
L ++ + AKG+A+L H D KI DFGLA+ +
Sbjct: 162 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKND 221
Query: 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQE 654
SN R +MAPE N T + DV+SYG+ + E+ + S + G +
Sbjct: 222 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF-SLGSSPY---PGMPVD 277
Query: 655 AELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTM 714
++ + ++E R +L E A A + I +C D D KRPT
Sbjct: 278 SKFYKMIKEGFR-MLSPEHA------------------PAEMYDIMKTCWDADPLKRPTF 318
Query: 715 DSVVQSLLECETESEIHI 732
+VQ + + +ES HI
Sbjct: 319 KQIVQLIEKQISESTNHI 336
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
E++++ + K +LG G G VY+GV VAVK L + E F E + + +I H
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--------SSYFLGWKERFKVALGTAK 568
NLV++ G C+ +I E++ +L +L + L + A+ +
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 569 GLAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
++H D K+ADFGL++L G + + + + APE +
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTXTAHAGAKFPIKWTAPESLAYN 192
Query: 619 PITAKVDVYSYGVVILEM 636
+ K DV+++GV++ E+
Sbjct: 193 KFSIKSDVWAFGVLLWEI 210
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 88/215 (40%), Gaps = 38/215 (17%)
Query: 465 SFKEELGRGGSGAVYKGVLAD-GRAVAVKRL-GDLHQGEEVFWA-EVSTIGKIYHMNLVR 521
KE LG GG G V + + D G VA+K+ +L W E+ + K+ H N+V
Sbjct: 18 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 77
Query: 522 MWGFCSEGRHRL-------LIYEYVEKQSLDKHLFS-SYFLGWKE-RFKVALG-TAKGLA 571
+G +L L EY E L K+L G KE + L + L
Sbjct: 78 AREV-PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 136
Query: 572 YLH-----HDEFEP--------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAP 612
YLH H + +P KI D G AK +G ++F GT Y+AP
Sbjct: 137 YLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV---GTLQYLAP 193
Query: 613 EWASNLPITAKVDVYSYGVVILEMVKGIR--LSNW 645
E T VD +S+G + E + G R L NW
Sbjct: 194 ELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW 228
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
E++++ + K +LG G G VY+GV VAVK L + E F E + + +I H
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--------SSYFLGWKERFKVALGTAK 568
NLV++ G C+ +I E++ +L +L + L + A+ +
Sbjct: 74 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 569 GLAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
++H D K+ADFGL++L G + + + + APE +
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 619 PITAKVDVYSYGVVILEM 636
+ K DV+++GV++ E+
Sbjct: 193 KFSIKSDVWAFGVLLWEI 210
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 88/215 (40%), Gaps = 38/215 (17%)
Query: 465 SFKEELGRGGSGAVYKGVLAD-GRAVAVKRL-GDLHQGEEVFWA-EVSTIGKIYHMNLVR 521
KE LG GG G V + + D G VA+K+ +L W E+ + K+ H N+V
Sbjct: 17 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 76
Query: 522 MWGFCSEGRHRL-------LIYEYVEKQSLDKHLFS-SYFLGWKE-RFKVALG-TAKGLA 571
+G +L L EY E L K+L G KE + L + L
Sbjct: 77 AREV-PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135
Query: 572 YLH-----HDEFEP--------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAP 612
YLH H + +P KI D G AK +G ++F GT Y+AP
Sbjct: 136 YLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV---GTLQYLAP 192
Query: 613 EWASNLPITAKVDVYSYGVVILEMVKGIR--LSNW 645
E T VD +S+G + E + G R L NW
Sbjct: 193 ELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW 227
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 126/318 (39%), Gaps = 66/318 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYK----GVLADGRA--VAVKRLG-DLHQGE-EVFWAEVS 509
E ++ SF + LG G G V + G++ A VAVK L H E E +E+
Sbjct: 42 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 101
Query: 510 TIGKI-YHMNLVRMWGFCSEGRHRLLIYEY------------------VEKQSLDKHLFS 550
+ + HMN+V + G C+ G L+I EY K S
Sbjct: 102 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 161
Query: 551 SYFLGWKERFKVALGTAKGLAYL------HHDEFE----------PKIADFGLAKLSQRG 594
L ++ + AKG+A+L H D KI DFGLA+ +
Sbjct: 162 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 221
Query: 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQE 654
SN R +MAPE N T + DV+SYG+ + E+ + S + G +
Sbjct: 222 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF-SLGSSPY---PGMPVD 277
Query: 655 AELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTM 714
++ + ++E R +L E A A + I +C D D KRPT
Sbjct: 278 SKFYKMIKEGFR-MLSPEHA------------------PAEMYDIMKTCWDADPLKRPTF 318
Query: 715 DSVVQSLLECETESEIHI 732
+VQ + + +ES HI
Sbjct: 319 KQIVQLIEKQISESTNHI 336
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 75/174 (43%), Gaps = 22/174 (12%)
Query: 486 GRAVAVKRLGDLHQGEEV--FWAEVSTIGKIYHMNLVRMWGFCSE--GRHRLLIYEYVEK 541
G VAVK L G + E+ + +YH N+V+ G C+E G LI E++
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 542 QSLDKHLFSSYF-LGWKERFKVALGTAKGLAYL------HHD----------EFEPKIAD 584
SL ++L + + K++ K A+ KG+ YL H D E + KI D
Sbjct: 98 GSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGD 157
Query: 585 FGLAKLSQRGSNSSQFSQIRGTKGY-MAPEWASNLPITAKVDVYSYGVVILEMV 637
FGL K + R + + APE DV+S+GV + E++
Sbjct: 158 FGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 211
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
E++++ + K +LG G G VY+GV VAVK L + E F E + + +I H
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--------SSYFLGWKERFKVALGTAK 568
NLV++ G C+ +I E++ +L +L + L + A+ +
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 569 GLAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
++H D K+ADFGL++L G + + + + APE +
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 619 PITAKVDVYSYGVVILEM 636
+ K DV+++GV++ E+
Sbjct: 193 KFSIKSDVWAFGVLLWEI 210
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 89/203 (43%), Gaps = 36/203 (17%)
Query: 466 FKEELGRGGSGAVYKGVLA--DGRAV--AVKRLGDLHQGEEV--FWAEVSTIGKIYHMNL 519
F E +GRG G VY G L DG+ + AVK L + EV F E + H N+
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 520 VRMWGFC--SEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYL--- 573
+ + G C SEG L++ Y++ L + + ++ K+ L AKG+ YL
Sbjct: 93 LSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 151
Query: 574 ---HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG------YMAPEW 614
H D +F K+ADFGLA R + + G +MA E
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLA----RDMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 615 ASNLPITAKVDVYSYGVVILEMV 637
T K DV+S+GV++ E++
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELM 230
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 126/318 (39%), Gaps = 66/318 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYK----GVLADGRA--VAVKRLG-DLHQGE-EVFWAEVS 509
E ++ SF + LG G G V + G++ A VAVK L H E E +E+
Sbjct: 37 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 96
Query: 510 TIGKI-YHMNLVRMWGFCSEGRHRLLIYEY------------------VEKQSLDKHLFS 550
+ + HMN+V + G C+ G L+I EY K S
Sbjct: 97 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 156
Query: 551 SYFLGWKERFKVALGTAKGLAYL------HHDEFE----------PKIADFGLAKLSQRG 594
L ++ + AKG+A+L H D KI DFGLA+ +
Sbjct: 157 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 216
Query: 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQE 654
SN R +MAPE N T + DV+SYG+ + E+ + S + G +
Sbjct: 217 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF-SLGSSPY---PGMPVD 272
Query: 655 AELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTM 714
++ + ++E R +L E A A + I +C D D KRPT
Sbjct: 273 SKFYKMIKEGFR-MLSPEHA------------------PAEMYDIMKTCWDADPLKRPTF 313
Query: 715 DSVVQSLLECETESEIHI 732
+VQ + + +ES HI
Sbjct: 314 KQIVQLIEKQISESTNHI 331
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
E++++ + K +LG G G VY+GV VAVK L + E F E + + +I H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--------SSYFLGWKERFKVALGTAK 568
NLV++ G C+ +I E++ +L +L + L + A+ +
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 569 GLAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
++H D K+ADFGL++L G + + + + APE +
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 619 PITAKVDVYSYGVVILEM 636
+ K DV+++GV++ E+
Sbjct: 188 KFSIKSDVWAFGVLLWEI 205
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
E++++ + K +LG G G VY+GV VAVK L + E F E + + +I H
Sbjct: 13 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 72
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--------SSYFLGWKERFKVALGTAK 568
NLV++ G C+ +I E++ +L +L + L + A+ +
Sbjct: 73 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 132
Query: 569 GLAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
++H D K+ADFGL++L G + + + + APE +
Sbjct: 133 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 191
Query: 619 PITAKVDVYSYGVVILEM 636
+ K DV+++GV++ E+
Sbjct: 192 KFSIKSDVWAFGVLLWEI 209
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
E++++ + K +LG G G VY+GV VAVK L + E F E + + +I H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL--------FSSYFLGWKERFKVALGTAK 568
NLV++ G C+ +I E++ +L +L + L + A+ +
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 569 GLAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
++H D K+ADFGL++L G + + + + APE +
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 619 PITAKVDVYSYGVVILEM 636
+ K DV+++GV++ E+
Sbjct: 188 KFSIKSDVWAFGVLLWEI 205
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 127/318 (39%), Gaps = 66/318 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYK----GVLADGRA--VAVKRLG-DLHQGE-EVFWAEVS 509
E ++ SF + LG G G V + G++ A VAVK L H E E +E+
Sbjct: 35 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 94
Query: 510 TIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY--FLGWKERFKV---- 562
+ + HMN+V + G C+ G L+I EY L L F+ K +
Sbjct: 95 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 154
Query: 563 ------------ALGTAKGLAYL------HHDEFE----------PKIADFGLAKLSQRG 594
+ AKG+A+L H D KI DFGLA+ +
Sbjct: 155 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 214
Query: 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQE 654
SN R +MAPE N T + DV+SYG+ + E+ + S + G +
Sbjct: 215 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF-SLGSSPY---PGMPVD 270
Query: 655 AELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTM 714
++ + ++E R +L E A A + I +C D D KRPT
Sbjct: 271 SKFYKMIKEGFR-MLSPEHA------------------PAEMYDIMKTCWDADPLKRPTF 311
Query: 715 DSVVQSLLECETESEIHI 732
+VQ + + +ES HI
Sbjct: 312 KQIVQLIEKQISESTNHI 329
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
E++++ + K +LG G G VY+GV VAVK L + E F E + + +I H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--------SSYFLGWKERFKVALGTAK 568
NLV++ G C+ +I E++ +L +L + L + A+ +
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 569 GLAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
++H D K+ADFGL++L G + + + + APE +
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 619 PITAKVDVYSYGVVILEM 636
+ K DV+++GV++ E+
Sbjct: 188 KFSIKSDVWAFGVLLWEI 205
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
E++++ + K +LG G G VY+GV VAVK L + E F E + + +I H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL--------FSSYFLGWKERFKVALGTAK 568
NLV++ G C+ +I E++ +L +L + L + A+ +
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 569 GLAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
++H D K+ADFGL++L G + + + + APE +
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 619 PITAKVDVYSYGVVILEM 636
+ K DV+++GV++ E+
Sbjct: 188 KFSIKSDVWAFGVLLWEI 205
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 20/199 (10%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
E++++ + K +LG G G VY+GV VAVK L + E F E + + +I H
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL--------FSSYFLGWKERFKVALGTAK 568
NLV++ G C+ +I E++ +L +L + L + A+ +
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 133
Query: 569 GLAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
++H D K+ADFGL++L G + + + + APE +
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 619 PITAKVDVYSYGVVILEMV 637
+ K DV+++GV++ E+
Sbjct: 193 KFSIKSDVWAFGVLLWEIA 211
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
E++++ + K +LG G G VY+GV VAVK L + E F E + + +I H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL--------FSSYFLGWKERFKVALGTAK 568
NLV++ G C+ +I E++ +L +L + L + A+ +
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 569 GLAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
++H D K+ADFGL++L G + + + + APE +
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 619 PITAKVDVYSYGVVILEM 636
+ K DV+++GV++ E+
Sbjct: 188 KFSIKSDVWAFGVLLWEI 205
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 91/205 (44%), Gaps = 20/205 (9%)
Query: 451 FRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVS 509
F+ E++++ + K +LG G G VY GV VAVK L + E F E +
Sbjct: 21 FQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 80
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL--------FSSYFLGWKERFK 561
+ +I H NLV++ G C+ ++ EY+ +L +L + L +
Sbjct: 81 VMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQIS 140
Query: 562 VALGTAKGLAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
A+ + ++H D K+ADFGL++L G + + + + A
Sbjct: 141 SAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTA 199
Query: 612 PEWASNLPITAKVDVYSYGVVILEM 636
PE + + K DV+++GV++ E+
Sbjct: 200 PESLAYNTFSIKSDVWAFGVLLWEI 224
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 27/214 (12%)
Query: 442 EGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGE 501
EG A +F R +A K K + +G+G G V G G VAVK + +
Sbjct: 174 EGTVAAQDEFYRSGWALNMKELKLL-QTIGKGEFGDVMLGDYR-GNKVAVKCIKN-DATA 230
Query: 502 EVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRL-LIYEYVEKQSLDKHLFSS--YFLGWKE 558
+ F AE S + ++ H NLV++ G E + L ++ EY+ K SL +L S LG
Sbjct: 231 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 290
Query: 559 RFKVALGTAKGLAYLHHDEFE----------------PKIADFGLAKLSQRGSNSSQFSQ 602
K +L + + YL + F K++DFGL K + ++ +
Sbjct: 291 LLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 350
Query: 603 IRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ APE + K DV+S+G+++ E+
Sbjct: 351 -----KWTAPEALREKKFSTKSDVWSFGILLWEI 379
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
E++++ + K +LG G G VY+GV VAVK L + E F E + + +I H
Sbjct: 7 EMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL--------FSSYFLGWKERFKVALGTAK 568
NLV++ G C+ +I E++ +L +L + L + A+ +
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 569 GLAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
++H D K+ADFGL++L G + + + + APE +
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTXTAHAGAKFPIKWTAPESLAYN 185
Query: 619 PITAKVDVYSYGVVILEM 636
+ K DV+++GV++ E+
Sbjct: 186 KFSIKSDVWAFGVLLWEI 203
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
E++++ + K +LG G G VY+GV VAVK L + E F E + + +I H
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 73
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--------SSYFLGWKERFKVALGTAK 568
NLV++ G C+ +I E++ +L +L + L + A+ +
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 569 GLAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
++H D K+ADFGL++L G + + + + APE +
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 619 PITAKVDVYSYGVVILEM 636
+ K DV+++GV++ E+
Sbjct: 193 KFSIKSDVWAFGVLLWEI 210
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
E++++ + K +LG G G VY+GV VAVK L + E F E + + +I H
Sbjct: 22 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 81
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--------SSYFLGWKERFKVALGTAK 568
NLV++ G C+ +I E++ +L +L + L + A+ +
Sbjct: 82 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 141
Query: 569 GLAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
++H D K+ADFGL++L G + + + + APE +
Sbjct: 142 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 200
Query: 619 PITAKVDVYSYGVVILEM 636
+ K DV+++GV++ E+
Sbjct: 201 KFSIKSDVWAFGVLLWEI 218
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 122/295 (41%), Gaps = 62/295 (21%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLA----DGRAVAVK--RLGDLHQGEEVFWAEVSTI 511
EL + S + +G G G V G L +VA+K ++G + F E S +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVA--LGTAKG 569
G+ H N++R+ G ++ + +++ E +E SLD S+ +F V +G +G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD-----SFLRKHDAQFTVIQLVGMLRG 155
Query: 570 LA----------YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK-- 607
+A Y+H D K++DFGL+++ + ++ + RG K
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RGGKIP 213
Query: 608 -GYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKR 666
+ +PE + T+ DV+SYG+V+ E++ W + + + +A
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA----------- 262
Query: 667 KILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
VD + + A L + + C +DR+ RP + +V L
Sbjct: 263 -------------VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
E++++ + K +LG G G VY+GV VAVK L + E F E + + +I H
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 70
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--------SSYFLGWKERFKVALGTAK 568
NLV++ G C+ +I E++ +L +L + L + A+ +
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 569 GLAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
++H D K+ADFGL++L G + + + + APE +
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 189
Query: 619 PITAKVDVYSYGVVILEM 636
+ K DV+++GV++ E+
Sbjct: 190 KFSIKSDVWAFGVLLWEI 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
E++++ + K +LG G G VY+GV VAVK L + E F E + + +I H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL--------FSSYFLGWKERFKVALGTAK 568
NLV++ G C+ +I E++ +L +L + L + A+ +
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 569 GLAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
++H D K+ADFGL++L G + + + + APE +
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 619 PITAKVDVYSYGVVILEM 636
+ K DV+++GV++ E+
Sbjct: 188 KFSIKSDVWAFGVLLWEI 205
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 122/295 (41%), Gaps = 62/295 (21%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLA----DGRAVAVK--RLGDLHQGEEVFWAEVSTI 511
EL + S + +G G G V G L +VA+K ++G + F E S +
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVA--LGTAKG 569
G+ H N++R+ G ++ + +++ E +E SLD S+ +F V +G +G
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD-----SFLRKHDAQFTVIQLVGMLRG 126
Query: 570 LA----------YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK-- 607
+A Y+H D K++DFGL+++ + ++ + RG K
Sbjct: 127 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT--RGGKIP 184
Query: 608 -GYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKR 666
+ +PE + T+ DV+SYG+V+ E++ W + + + +A
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA----------- 233
Query: 667 KILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
VD + + A L + + C +DR+ RP + +V L
Sbjct: 234 -------------VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 454 FSYAELKKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQ-GEEVFWAEVSTI 511
S + KK F E++G+G SG VY + +A G+ VA++++ Q +E+ E+ +
Sbjct: 13 VSVGDPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 71
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLA 571
+ + N+V G ++ EY+ SL + + + + V + L
Sbjct: 72 RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQALE 130
Query: 572 YLHHDEF----------------EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA 615
+LH ++ K+ DFG +Q S+ S++ GT +MAPE
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSEMVGTPYWMAPEVV 188
Query: 616 SNLPITAKVDVYSYGVVILEMVKG 639
+ KVD++S G++ +EM++G
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
E++++ + K +LG G G VY+GV VAVK L + E F E + + +I H
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 70
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--------SSYFLGWKERFKVALGTAK 568
NLV++ G C+ +I E++ +L +L + L + A+ +
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 569 GLAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
++H D K+ADFGL++L G + + + + APE +
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 189
Query: 619 PITAKVDVYSYGVVILEM 636
+ K DV+++GV++ E+
Sbjct: 190 KFSIKSDVWAFGVLLWEI 207
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 43/232 (18%)
Query: 437 PSSLEEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVL-ADGR---AVAVK 492
P + E+ QA+ R F+ E+ S ++ +G G G V G L G+ VA+K
Sbjct: 9 PFTFEDPNQAV----REFA-KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIK 63
Query: 493 RL--GDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS 550
L G + F +E S +G+ H N++ + G ++ + ++I EY+E SLD L
Sbjct: 64 TLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK 123
Query: 551 SYFLGWKERFKVAL------GTAKGLAYL------HHD----------EFEPKIADFGLA 588
+ RF V G G+ YL H D K++DFG++
Sbjct: 124 N-----DGRFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMS 178
Query: 589 KLSQRGSNSSQFSQIRGTK---GYMAPEWASNLPITAKVDVYSYGVVILEMV 637
++ + ++ + RG K + APE + T+ DV+SYG+V+ E++
Sbjct: 179 RVLEDDPEAAYTT--RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 228
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
E++++ + K +LG G G VY+GV VAVK L + E F E + + +I H
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL--------FSSYFLGWKERFKVALGTAK 568
NLV++ G C+ +I E++ +L +L + L + A+ +
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 569 GLAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
++H D K+ADFGL++L G + + + + APE +
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTFTAHAGAKFPIKWTAPESLAYN 185
Query: 619 PITAKVDVYSYGVVILEM 636
+ K DV+++GV++ E+
Sbjct: 186 KFSIKSDVWAFGVLLWEI 203
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 83/193 (43%), Gaps = 22/193 (11%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG---EEVFWAEVSTIGKIYHMNLVRMW 523
+ LG G +G V V AVAVK + D+ + E E+ + H N+V+ +
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEF 578
G EG + L EY L + + + + G+ YLH H +
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 579 EP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK-VDV 626
+P KI+DFGLA + + + +++ GT Y+APE A+ VDV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 627 YSYGVVILEMVKG 639
+S G+V+ M+ G
Sbjct: 191 WSCGIVLTAMLAG 203
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 129/316 (40%), Gaps = 67/316 (21%)
Query: 437 PSSLEEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLA----DGRAVAVK 492
P + E+ Q + +F + EL + S + +G G G V G L +VA+K
Sbjct: 25 PHTFEDPTQTVH-EFAK----ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 493 --RLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS 550
++G + F E S +G+ H N++R+ G ++ + +++ E +E SLD
Sbjct: 80 TLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD----- 134
Query: 551 SYFLGWKERFKVAL------GTAKGLAYL------HHD----------EFEPKIADFGLA 588
S+ +F V G A G+ YL H D K++DFGL+
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 589 KLSQRGSNSSQFSQIRGTK---GYMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLSNW 645
++ + ++ + RG K + +PE + T+ DV+SYG+V+ E++ W
Sbjct: 195 RVLEDDPEAAYTT--RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 646 VVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVD 705
+ + + +A VD + + A L + + C
Sbjct: 253 EMSNQDVIKA------------------------VDEGYRLPPPMDCPAALYQLMLDCWQ 288
Query: 706 EDRSKRPTMDSVVQSL 721
+DR+ RP + +V L
Sbjct: 289 KDRNNRPKFEQIVSIL 304
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
E++++ + K +LG G G VY+GV VAVK L + E F E + + +I H
Sbjct: 10 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 69
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--------SSYFLGWKERFKVALGTAK 568
NLV++ G C+ +I E++ +L +L + L + A+ +
Sbjct: 70 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 569 GLAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
++H D K+ADFGL++L G + + + + APE +
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAPAGAKFPIKWTAPESLAYN 188
Query: 619 PITAKVDVYSYGVVILEM 636
+ K DV+++GV++ E+
Sbjct: 189 KFSIKSDVWAFGVLLWEI 206
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 20/198 (10%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
E++++ + K +LG G G VY+GV VAVK L + E F E + + +I H
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 70
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--------SSYFLGWKERFKVALGTAK 568
NLV++ G C+ +I E++ +L +L + L + A+ +
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 569 GLAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
++H D K+ADFGL++L G + + + + APE +
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAPAGAKFPIKWTAPESLAYN 189
Query: 619 PITAKVDVYSYGVVILEM 636
+ K DV+++GV++ E+
Sbjct: 190 KFSIKSDVWAFGVLLWEI 207
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 37/207 (17%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + ++LG G G V+ G + VAVK L + F E + + + H
Sbjct: 8 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD 67
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVAL--------GTAKG 569
LVR++ ++ +I E++ K SL FL E KV L A+G
Sbjct: 68 KLVRLYAVVTKEEPIYIITEFMAKGSLLD------FLKSDEGGKVLLPKLIDFSAQIAEG 121
Query: 570 LA------YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYM 610
+A Y+H D KIADFGLA++ + ++++ G K +
Sbjct: 122 MAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIE----DNEYTAREGAKFPIKWT 177
Query: 611 APEWASNLPITAKVDVYSYGVVILEMV 637
APE + T K +V+S+G+++ E+V
Sbjct: 178 APEAINFGCFTIKSNVWSFGILLYEIV 204
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 89/212 (41%), Gaps = 40/212 (18%)
Query: 465 SFKEELGRGGSGAVYK---GVLAD--GRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYH 516
F ++LG+G G+V L D G VAVK+L H EE F E+ + + H
Sbjct: 12 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 69
Query: 517 MNLVRMWGFC-SEGRHRL-LIYEYVEKQSLDKHLFSSYFLGWKER------FKVALGTAK 568
N+V+ G C S GR L LI EY+ SL Y KER + K
Sbjct: 70 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSL-----RDYLQKHKERIDHIKLLQYTSQICK 124
Query: 569 GLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGY-MA 611
G+ YL H D E KI DFGL K+ + + + + + A
Sbjct: 125 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 184
Query: 612 PEWASNLPITAKVDVYSYGVVILEMVKGIRLS 643
PE + + DV+S+GVV+ E+ I S
Sbjct: 185 PESLTESKFSVASDVWSFGVVLYELFTYIEKS 216
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 22/204 (10%)
Query: 454 FSYAELKKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQ-GEEVFWAEVSTI 511
S + KK F E++G+G SG VY + +A G+ VA++++ Q +E+ E+ +
Sbjct: 13 VSVGDPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 71
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLA 571
+ + N+V G ++ EY+ SL + + + + V + L
Sbjct: 72 RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQALE 130
Query: 572 YLHHDEF----------------EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA 615
+LH ++ K+ DFG +Q S+ S + GT +MAPE
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSTMVGTPYWMAPEVV 188
Query: 616 SNLPITAKVDVYSYGVVILEMVKG 639
+ KVD++S G++ +EM++G
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG---EEVFWAEVSTIGKIYHMNLVRMW 523
+ LG G G V V AVAVK + D+ + E E+ + H N+V+ +
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEF 578
G EG + L EY L + + + + G+ YLH H +
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 579 EP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK-VDV 626
+P KI+DFGLA + + + +++ GT Y+APE A+ VDV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDV 190
Query: 627 YSYGVVILEMVKG 639
+S G+V+ M+ G
Sbjct: 191 WSCGIVLTAMLAG 203
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 28/206 (13%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVL-ADGR---AVAVKRL--GDLHQGEEVFWAEVSTI 511
E+ S ++ +G G G V G L G+ VA+K L G + F +E S +
Sbjct: 4 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 63
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS-------YFLGWKERFKVAL 564
G+ H N++ + G ++ + ++I EY+E SLD L + +G +
Sbjct: 64 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGM 123
Query: 565 GTAKGLAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMA 611
++Y+H D K++DFG++++ + ++ + RG K + A
Sbjct: 124 KYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT--RGGKIPIRWTA 181
Query: 612 PEWASNLPITAKVDVYSYGVVILEMV 637
PE + T+ DV+SYG+V+ E++
Sbjct: 182 PEAIAYRKFTSASDVWSYGIVMWEVM 207
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 29/212 (13%)
Query: 452 RRFSYAELKKSTKSFKEELGRGGSGAVYKGVL-ADGR---AVAVKRL--GDLHQGEEVFW 505
R F+ E+ S ++ +G G G V G L G+ VA+K L G + F
Sbjct: 5 REFA-KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFL 63
Query: 506 AEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS-------YFLGWKE 558
+E S +G+ H N++ + G ++ + ++I EY+E SLD L + +G
Sbjct: 64 SEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR 123
Query: 559 RFKVALGTAKGLAYLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK- 607
+ ++Y+H D K++DFG++++ + ++ + RG K
Sbjct: 124 GIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT--RGGKI 181
Query: 608 --GYMAPEWASNLPITAKVDVYSYGVVILEMV 637
+ APE + T+ DV+SYG+V+ E++
Sbjct: 182 PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 213
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG---EEVFWAEVSTIGKIYHMNLVRMW 523
+ LG G G V V AVAVK + D+ + E E+ + H N+V+ +
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEF 578
G EG + L EY L + + + + G+ YLH H +
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 579 EP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK-VDV 626
+P KI+DFGLA + + + +++ GT Y+APE A+ VDV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDV 190
Query: 627 YSYGVVILEMVKG 639
+S G+V+ M+ G
Sbjct: 191 WSCGIVLTAMLAG 203
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 22/204 (10%)
Query: 454 FSYAELKKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQ-GEEVFWAEVSTI 511
S + KK F E++G+G SG VY + +A G+ VA++++ Q +E+ E+ +
Sbjct: 13 VSVGDPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 71
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLA 571
+ + N+V G ++ EY+ SL + + + + V + L
Sbjct: 72 RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQALE 130
Query: 572 YLHHDEF----------------EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA 615
+LH ++ K+ DFG +Q S+ S + GT +MAPE
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSXMVGTPYWMAPEVV 188
Query: 616 SNLPITAKVDVYSYGVVILEMVKG 639
+ KVD++S G++ +EM++G
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 30/204 (14%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
E++++ + K +LG G G VY+GV VAVK L + E F E + + +I H
Sbjct: 216 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 275
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSL-------DKHLFSSYFLGWKERFKVALGTAKG 569
NLV++ G C+ +I E++ +L ++ S+ L +A +
Sbjct: 276 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSA 330
Query: 570 LAYLHHDEFEP----------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE 613
+ YL F K+ADFGL++L G + + + + APE
Sbjct: 331 MEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPE 389
Query: 614 WASNLPITAKVDVYSYGVVILEMV 637
+ + K DV+++GV++ E+
Sbjct: 390 SLAYNKFSIKSDVWAFGVLLWEIA 413
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 89/212 (41%), Gaps = 40/212 (18%)
Query: 465 SFKEELGRGGSGAVYK---GVLAD--GRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYH 516
F ++LG+G G+V L D G VAVK+L H EE F E+ + + H
Sbjct: 18 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 75
Query: 517 MNLVRMWGFC-SEGRHRL-LIYEYVEKQSLDKHLFSSYFLGWKER------FKVALGTAK 568
N+V+ G C S GR L LI EY+ SL Y KER + K
Sbjct: 76 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSL-----RDYLQKHKERIDHIKLLQYTSQICK 130
Query: 569 GLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGY-MA 611
G+ YL H D E KI DFGL K+ + + + + + A
Sbjct: 131 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 190
Query: 612 PEWASNLPITAKVDVYSYGVVILEMVKGIRLS 643
PE + + DV+S+GVV+ E+ I S
Sbjct: 191 PESLTESKFSVASDVWSFGVVLYELFTYIEKS 222
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG---EEVFWAEVSTIGKIYHMNLVRMW 523
+ LG G G V V AVAVK + D+ + E E+ + H N+V+ +
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEF 578
G EG + L EY L + + + + G+ YLH H +
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 579 EP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK-VDV 626
+P KI+DFGLA + + + +++ GT Y+APE A+ VDV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDV 190
Query: 627 YSYGVVILEMVKG 639
+S G+V+ M+ G
Sbjct: 191 WSCGIVLTAMLAG 203
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 89/212 (41%), Gaps = 40/212 (18%)
Query: 465 SFKEELGRGGSGAVYK---GVLAD--GRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYH 516
F ++LG+G G+V L D G VAVK+L H EE F E+ + + H
Sbjct: 17 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 74
Query: 517 MNLVRMWGFC-SEGRHRL-LIYEYVEKQSLDKHLFSSYFLGWKER------FKVALGTAK 568
N+V+ G C S GR L LI EY+ SL Y KER + K
Sbjct: 75 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSL-----RDYLQKHKERIDHIKLLQYTSQICK 129
Query: 569 GLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGY-MA 611
G+ YL H D E KI DFGL K+ + + + + + A
Sbjct: 130 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 189
Query: 612 PEWASNLPITAKVDVYSYGVVILEMVKGIRLS 643
PE + + DV+S+GVV+ E+ I S
Sbjct: 190 PESLTESKFSVASDVWSFGVVLYELFTYIEKS 221
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 89/212 (41%), Gaps = 40/212 (18%)
Query: 465 SFKEELGRGGSGAVYK---GVLAD--GRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYH 516
F ++LG+G G+V L D G VAVK+L H EE F E+ + + H
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 70
Query: 517 MNLVRMWGFC-SEGRHRL-LIYEYVEKQSLDKHLFSSYFLGWKER------FKVALGTAK 568
N+V+ G C S GR L LI EY+ SL Y KER + K
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSL-----RDYLQKHKERIDHIKLLQYTSQICK 125
Query: 569 GLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGY-MA 611
G+ YL H D E KI DFGL K+ + + + + + A
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 612 PEWASNLPITAKVDVYSYGVVILEMVKGIRLS 643
PE + + DV+S+GVV+ E+ I S
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFTYIEKS 217
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 22/204 (10%)
Query: 454 FSYAELKKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQ-GEEVFWAEVSTI 511
S + KK F E++G+G SG VY + +A G+ VA++++ Q +E+ E+ +
Sbjct: 14 VSVGDPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 72
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLA 571
+ + N+V G ++ EY+ SL + + + + V + L
Sbjct: 73 RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQALE 131
Query: 572 YLHHDEF----------------EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA 615
+LH ++ K+ DFG +Q S+ S + GT +MAPE
Sbjct: 132 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSXMVGTPYWMAPEVV 189
Query: 616 SNLPITAKVDVYSYGVVILEMVKG 639
+ KVD++S G++ +EM++G
Sbjct: 190 TRKAYGPKVDIWSLGIMAIEMIEG 213
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG---EEVFWAEVSTIGKIYHMNLVRMW 523
+ LG G G V V AVAVK + D+ + E E+ + H N+V+ +
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 71
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEF 578
G EG + L EY L + + + + G+ YLH H +
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 579 EP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK-VDV 626
+P KI+DFGLA + + + +++ GT Y+APE A+ VDV
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDV 191
Query: 627 YSYGVVILEMVKG 639
+S G+V+ M+ G
Sbjct: 192 WSCGIVLTAMLAG 204
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG---EEVFWAEVSTIGKIYHMNLVRMW 523
+ LG G G V V AVAVK + D+ + E E+ + H N+V+ +
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEF 578
G EG + L EY L + + + + G+ YLH H +
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 579 EP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK-VDV 626
+P KI+DFGLA + + + +++ GT Y+APE A+ VDV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDV 190
Query: 627 YSYGVVILEMVKG 639
+S G+V+ M+ G
Sbjct: 191 WSCGIVLTAMLAG 203
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 89/212 (41%), Gaps = 40/212 (18%)
Query: 465 SFKEELGRGGSGAVYK---GVLAD--GRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYH 516
F ++LG+G G+V L D G VAVK+L H EE F E+ + + H
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 73
Query: 517 MNLVRMWGFC-SEGRHRL-LIYEYVEKQSLDKHLFSSYFLGWKER------FKVALGTAK 568
N+V+ G C S GR L LI EY+ SL Y KER + K
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSL-----RDYLQKHKERIDHIKLLQYTSQICK 128
Query: 569 GLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGY-MA 611
G+ YL H D E KI DFGL K+ + + + + + A
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 612 PEWASNLPITAKVDVYSYGVVILEMVKGIRLS 643
PE + + DV+S+GVV+ E+ I S
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFTYIEKS 220
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 89/212 (41%), Gaps = 40/212 (18%)
Query: 465 SFKEELGRGGSGAVYK---GVLAD--GRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYH 516
F ++LG+G G+V L D G VAVK+L H EE F E+ + + H
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 70
Query: 517 MNLVRMWGFC-SEGRHRL-LIYEYVEKQSLDKHLFSSYFLGWKER------FKVALGTAK 568
N+V+ G C S GR L LI EY+ SL Y KER + K
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSL-----RDYLQKHKERIDHIKLLQYTSQICK 125
Query: 569 GLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGY-MA 611
G+ YL H D E KI DFGL K+ + + + + + A
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 612 PEWASNLPITAKVDVYSYGVVILEMVKGIRLS 643
PE + + DV+S+GVV+ E+ I S
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFTYIEKS 217
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG---EEVFWAEVSTIGKIYHMNLVRMW 523
+ LG G G V V AVAVK + D+ + E E+ + H N+V+ +
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINAMLNHENVVKFY 71
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEF 578
G EG + L EY L + + + + G+ YLH H +
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 579 EP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK-VDV 626
+P KI+DFGLA + + + +++ GT Y+APE A+ VDV
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 627 YSYGVVILEMVKG 639
+S G+V+ M+ G
Sbjct: 192 WSCGIVLTAMLAG 204
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 86/219 (39%), Gaps = 44/219 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVL------ADGRAVAVKRLGDLH-QGEEVFWAEVST 510
+K+ K ELG G G V+ D VAVK L D + F E
Sbjct: 9 HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAEL 68
Query: 511 IGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS-------------YFLGWK 557
+ + H ++V+ +G C EG ++++EY++ L+K L + L
Sbjct: 69 LTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQS 128
Query: 558 ERFKVALGTAKGLAYLHHDEFEP----------------KIADFGLAKLSQRGSNSSQFS 601
+ +A A G+ YL F KI DFG++ R S+ +
Sbjct: 129 QMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMS----RDVYSTDYY 184
Query: 602 QIRGTKG----YMAPEWASNLPITAKVDVYSYGVVILEM 636
++ G +M PE T + DV+S GVV+ E+
Sbjct: 185 RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEI 223
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 117/290 (40%), Gaps = 50/290 (17%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLA-DGRA---VAVKRL--GDLHQGEEVFWAEVSTI 511
E+ S ++ +G G G V G L G+ VA+K L G + F +E S +
Sbjct: 3 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM 62
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS-------YFLGWKERFKVAL 564
G+ H N++ + G ++ ++I E++E SLD L + +G +
Sbjct: 63 GQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGM 122
Query: 565 GTAKGLAYLH----------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMA 611
+ Y+H + K++DFGL++ + ++ ++ G K + A
Sbjct: 123 KYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA 182
Query: 612 PEWASNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYE 671
PE T+ DV+SYG+V+ E++ W + + + A
Sbjct: 183 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINA---------------- 226
Query: 672 EEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
IE+ D RL + A L + + C +DR+ RP +V +L
Sbjct: 227 ----IEQ--DYRLPPPMDCPSA--LHQLMLDCWQKDRNHRPKFGQIVNTL 268
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 22/204 (10%)
Query: 454 FSYAELKKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQ-GEEVFWAEVSTI 511
S + KK F E++G+G SG VY + +A G+ VA++++ Q +E+ E+ +
Sbjct: 14 VSVGDPKKKYTRF-EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 72
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLA 571
+ + N+V G ++ EY+ SL + + + + V + L
Sbjct: 73 RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQALE 131
Query: 572 YLHHDEF----------------EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA 615
+LH ++ K+ DFG +Q S+ S + GT +MAPE
Sbjct: 132 FLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSTMVGTPYWMAPEVV 189
Query: 616 SNLPITAKVDVYSYGVVILEMVKG 639
+ KVD++S G++ +EM++G
Sbjct: 190 TRKAYGPKVDIWSLGIMAIEMIEG 213
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 38/217 (17%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKG------VLADGRAVAVKRL--GDLHQGEEVFWAEVS 509
E + + + LGRG G V + A R VAVK L G H +E+
Sbjct: 23 EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELK 82
Query: 510 TIGKI-YHMNLVRMWGFCSE-GRHRLLIYEYVEKQSLDKHLFS--SYFLGWKERFK---- 561
+ I +H+N+V + G C++ G ++I E+ + +L +L S + F+ +K+ +K
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLT 142
Query: 562 ------VALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQ 599
+ AKG+ +L H D + KI DFGLA+ + + +
Sbjct: 143 LEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 202
Query: 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
R +MAPE + T + DV+S+GV++ E+
Sbjct: 203 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 239
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 89/212 (41%), Gaps = 40/212 (18%)
Query: 465 SFKEELGRGGSGAVYK---GVLAD--GRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYH 516
F ++LG+G G+V L D G VAVK+L H EE F E+ + + H
Sbjct: 11 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 68
Query: 517 MNLVRMWGFC-SEGRHRL-LIYEYVEKQSLDKHLFSSYFLGWKER------FKVALGTAK 568
N+V+ G C S GR L LI EY+ SL Y KER + K
Sbjct: 69 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSL-----RDYLQKHKERIDHIKLLQYTSQICK 123
Query: 569 GLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGY-MA 611
G+ YL H D E KI DFGL K+ + + + + + A
Sbjct: 124 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 183
Query: 612 PEWASNLPITAKVDVYSYGVVILEMVKGIRLS 643
PE + + DV+S+GVV+ E+ I S
Sbjct: 184 PESLTESKFSVASDVWSFGVVLYELFTYIEKS 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 89/211 (42%), Gaps = 40/211 (18%)
Query: 466 FKEELGRGGSGAVYK---GVLAD--GRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHM 517
F ++LG+G G+V L D G VAVK+L H EE F E+ + + H
Sbjct: 21 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQHD 78
Query: 518 NLVRMWGFC-SEGRHRL-LIYEYVEKQSLDKHLFSSYFLGWKER------FKVALGTAKG 569
N+V+ G C S GR L LI EY+ SL Y KER + KG
Sbjct: 79 NIVKYKGVCYSAGRRNLKLIMEYLPYGSL-----RDYLQKHKERIDHIKLLQYTSQICKG 133
Query: 570 LAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGY-MAP 612
+ YL H D E KI DFGL K+ + + + + + AP
Sbjct: 134 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 193
Query: 613 EWASNLPITAKVDVYSYGVVILEMVKGIRLS 643
E + + DV+S+GVV+ E+ I S
Sbjct: 194 ESLTESKFSVASDVWSFGVVLYELFTYIEKS 224
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 89/212 (41%), Gaps = 40/212 (18%)
Query: 465 SFKEELGRGGSGAVYK---GVLAD--GRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYH 516
F ++LG+G G+V L D G VAVK+L H EE F E+ + + H
Sbjct: 19 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 76
Query: 517 MNLVRMWGFC-SEGRHRL-LIYEYVEKQSLDKHLFSSYFLGWKER------FKVALGTAK 568
N+V+ G C S GR L LI EY+ SL Y KER + K
Sbjct: 77 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSL-----RDYLQKHKERIDHIKLLQYTSQICK 131
Query: 569 GLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGY-MA 611
G+ YL H D E KI DFGL K+ + + + + + A
Sbjct: 132 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 191
Query: 612 PEWASNLPITAKVDVYSYGVVILEMVKGIRLS 643
PE + + DV+S+GVV+ E+ I S
Sbjct: 192 PESLTESKFSVASDVWSFGVVLYELFTYIEKS 223
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG---EEVFWAEVSTIGKIYHMNLVRMW 523
+ LG G G V V AVAVK + D+ + E E+ + H N+V+ +
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEF 578
G EG + L EY L + + + + G+ YLH H +
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 579 EP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK-VDV 626
+P KI+DFGLA + + + +++ GT Y+APE A+ VDV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 627 YSYGVVILEMVKG 639
+S G+V+ M+ G
Sbjct: 191 WSCGIVLTAMLAG 203
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG---EEVFWAEVSTIGKIYHMNLVRMW 523
+ LG G G V V AVAVK + D+ + E E+ + H N+V+ +
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEF 578
G EG + L EY L + + + + G+ YLH H +
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 579 EP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK-VDV 626
+P KI+DFGLA + + + +++ GT Y+APE A+ VDV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 627 YSYGVVILEMVKG 639
+S G+V+ M+ G
Sbjct: 191 WSCGIVLTAMLAG 203
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 29/222 (13%)
Query: 442 EGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLA-DGR---AVAVK--RLG 495
E Y+ + +F+ EL S + +G G G V G L G+ AVA+K ++G
Sbjct: 24 ETYEDPNRAVHQFA-KELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVG 82
Query: 496 DLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS---- 551
+ F E S +G+ H N+V + G + G+ +++ E++E +LD L
Sbjct: 83 YTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQF 142
Query: 552 ---YFLGWKERFKVALGTAKGLAYLHHD----------EFEPKIADFGLAKLSQRGSNSS 598
+G + + Y+H D K++DFGL+++ + +
Sbjct: 143 TVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIE--DDPE 200
Query: 599 QFSQIRGTK---GYMAPEWASNLPITAKVDVYSYGVVILEMV 637
G K + APE T+ DV+SYG+V+ E++
Sbjct: 201 AVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 242
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 89/221 (40%), Gaps = 44/221 (19%)
Query: 448 SSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGV-LADGRAV----AVKRLGDL--HQG 500
+Q R ELK+ + LG G G VYKG+ + +G V A+K L + +
Sbjct: 6 QAQLRILKETELKRV-----KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKA 60
Query: 501 EEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSY 552
F E + + H +LVR+ G C +L+ + EYV + ++ S
Sbjct: 61 NVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHK--DNIGSQL 118
Query: 553 FLGWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSN 596
L W + AKG+ YL H D KI DFGLA+L +
Sbjct: 119 LLNW------CVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 172
Query: 597 SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMV 637
+ +MA E T + DV+SYGV I E++
Sbjct: 173 EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELM 213
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG---EEVFWAEVSTIGKIYHMNLVRMW 523
+ LG G G V V AVAVK + D+ + E E+ + H N+V+ +
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFY 69
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEF 578
G EG + L EY L + + + + G+ YLH H +
Sbjct: 70 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 129
Query: 579 EP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK-VDV 626
+P KI+DFGLA + + + +++ GT Y+APE A+ VDV
Sbjct: 130 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 189
Query: 627 YSYGVVILEMVKG 639
+S G+V+ M+ G
Sbjct: 190 WSCGIVLTAMLAG 202
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG---EEVFWAEVSTIGKIYHMNLVRMW 523
+ LG G G V V AVAVK + D+ + E E+ + H N+V+ +
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEF 578
G EG + L EY L + + + + G+ YLH H +
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 579 EP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK-VDV 626
+P KI+DFGLA + + + +++ GT Y+APE A+ VDV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 627 YSYGVVILEMVKG 639
+S G+V+ M+ G
Sbjct: 191 WSCGIVLTAMLAG 203
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 89/212 (41%), Gaps = 40/212 (18%)
Query: 465 SFKEELGRGGSGAVYK---GVLAD--GRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYH 516
F ++LG+G G+V L D G VAVK+L H EE F E+ + + H
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 88
Query: 517 MNLVRMWGFC-SEGRHRL-LIYEYVEKQSLDKHLFSSYFLGWKER------FKVALGTAK 568
N+V+ G C S GR L LI EY+ SL Y KER + K
Sbjct: 89 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSL-----RDYLQKHKERIDHIKLLQYTSQICK 143
Query: 569 GLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGY-MA 611
G+ YL H D E KI DFGL K+ + + + + + A
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 203
Query: 612 PEWASNLPITAKVDVYSYGVVILEMVKGIRLS 643
PE + + DV+S+GVV+ E+ I S
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYELFTYIEKS 235
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG---EEVFWAEVSTIGKIYHMNLVRMW 523
+ LG G G V V AVAVK + D+ + E E+ + H N+V+ +
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEF 578
G EG + L EY L + + + + G+ YLH H +
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 579 EP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK-VDV 626
+P KI+DFGLA + + + +++ GT Y+APE A+ VDV
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 627 YSYGVVILEMVKG 639
+S G+V+ M+ G
Sbjct: 192 WSCGIVLTAMLAG 204
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG---EEVFWAEVSTIGKIYHMNLVRMW 523
+ LG G G V V AVAVK + D+ + E E+ + H N+V+ +
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEF 578
G EG + L EY L + + + + G+ YLH H +
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 579 EP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK-VDV 626
+P KI+DFGLA + + + +++ GT Y+APE A+ VDV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 627 YSYGVVILEMVKG 639
+S G+V+ M+ G
Sbjct: 191 WSCGIVLTAMLAG 203
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG---EEVFWAEVSTIGKIYHMNLVRMW 523
+ LG G G V V AVAVK + D+ + E E+ + H N+V+ +
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEF 578
G EG + L EY L + + + + G+ YLH H +
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 579 EP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK-VDV 626
+P KI+DFGLA + + + +++ GT Y+APE A+ VDV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 627 YSYGVVILEMVKG 639
+S G+V+ M+ G
Sbjct: 191 WSCGIVLTAMLAG 203
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG---EEVFWAEVSTIGKIYHMNLVRMW 523
+ LG G G V V AVAVK + D+ + E E+ + H N+V+ +
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEF 578
G EG + L EY L + + + + G+ YLH H +
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 579 EP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK-VDV 626
+P KI+DFGLA + + + +++ GT Y+APE A+ VDV
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 627 YSYGVVILEMVKG 639
+S G+V+ M+ G
Sbjct: 192 WSCGIVLTAMLAG 204
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG---EEVFWAEVSTIGKIYHMNLVRMW 523
+ LG G G V V AVAVK + D+ + E E+ + H N+V+ +
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEF 578
G EG + L EY L + + + + G+ YLH H +
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 579 EP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK-VDV 626
+P KI+DFGLA + + + +++ GT Y+APE A+ VDV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 627 YSYGVVILEMVKG 639
+S G+V+ M+ G
Sbjct: 191 WSCGIVLTAMLAG 203
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 88/222 (39%), Gaps = 47/222 (21%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKG------VLADGRAVAVKRLGD-LHQGEEVFWAEVST 510
+K+ K ELG G G V+ D VAVK L D + F E
Sbjct: 11 HIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAEL 70
Query: 511 IGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF----------------SSYFL 554
+ + H ++V+ +G C +G ++++EY++ L+K L + L
Sbjct: 71 LTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGEL 130
Query: 555 GWKERFKVALGTAKGLAYLHHDEFEP----------------KIADFGLAKLSQRGSNSS 598
G + +A A G+ YL F KI DFG++ R S+
Sbjct: 131 GLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMS----RDVYST 186
Query: 599 QFSQIRGTK----GYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ ++ G +M PE T + DV+S+GV++ E+
Sbjct: 187 DYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEI 228
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG---EEVFWAEVSTIGKIYHMNLVRMW 523
+ LG G G V V AVAVK + D+ + E E+ + H N+V+ +
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEF 578
G EG + L EY L + + + + G+ YLH H +
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 579 EP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK-VDV 626
+P KI+DFGLA + + + +++ GT Y+APE A+ VDV
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 627 YSYGVVILEMVKG 639
+S G+V+ M+ G
Sbjct: 192 WSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG---EEVFWAEVSTIGKIYHMNLVRMW 523
+ LG G G V V AVAVK + D+ + E E+ + H N+V+ +
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEF 578
G EG + L EY L + + + + G+ YLH H +
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 579 EP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK-VDV 626
+P KI+DFGLA + + + +++ GT Y+APE A+ VDV
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 627 YSYGVVILEMVKG 639
+S G+V+ M+ G
Sbjct: 192 WSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG---EEVFWAEVSTIGKIYHMNLVRMW 523
+ LG G G V V AVAVK + D+ + E E+ + H N+V+ +
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEF 578
G EG + L EY L + + + + G+ YLH H +
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 579 EP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK-VDV 626
+P KI+DFGLA + + + +++ GT Y+APE A+ VDV
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 627 YSYGVVILEMVKG 639
+S G+V+ M+ G
Sbjct: 192 WSCGIVLTAMLAG 204
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 111/252 (44%), Gaps = 47/252 (18%)
Query: 463 TKSFKEELGRGGSGAVYK-GVLADGRAVAVK--RLGDLHQGEEVFWAEVSTIGKIYHMNL 519
T S E LG G G V+K A G +A K + + EEV E+S + ++ H NL
Sbjct: 90 TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEV-KNEISVMNQLDHANL 148
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSL-DKHLFSSYFLGWKERFKVALGTAKGLAYLH---- 574
++++ +L+ EYV+ L D+ + SY L + +G+ ++H
Sbjct: 149 IQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYI 208
Query: 575 -HDEFEP-------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPI 620
H + +P KI DFGLA+ R + GT ++APE + +
Sbjct: 209 LHLDLKPENILCVNRDAKQIKIIDFGLAR---RYKPREKLKVNFGTPEFLAPEVVNYDFV 265
Query: 621 TAKVDVYSYGVVILEMVKGIR----------LSN-----WVVEDGEGQE--AELKRFVRE 663
+ D++S GV+ ++ G+ L+N W +ED E Q+ E K F+
Sbjct: 266 SFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFI-- 323
Query: 664 VKRKILYEEEAW 675
K+L +E++W
Sbjct: 324 --SKLLIKEKSW 333
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG---EEVFWAEVSTIGKIYHMNLVRMW 523
+ LG G G V V AVAVK + D+ + E E+ + H N+V+ +
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEF 578
G EG + L EY L + + + + G+ YLH H +
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 579 EP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK-VDV 626
+P KI+DFGLA + + + +++ GT Y+APE A+ VDV
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 627 YSYGVVILEMVKG 639
+S G+V+ M+ G
Sbjct: 192 WSCGIVLTAMLAG 204
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 89/212 (41%), Gaps = 40/212 (18%)
Query: 465 SFKEELGRGGSGAVYK---GVLAD--GRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYH 516
F ++LG+G G+V L D G VAVK+L H EE F E+ + + H
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 88
Query: 517 MNLVRMWGFC-SEGRHRL-LIYEYVEKQSLDKHLFSSYFLGWKER------FKVALGTAK 568
N+V+ G C S GR L LI EY+ SL Y KER + K
Sbjct: 89 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSL-----RDYLQKHKERIDHIKLLQYTSQICK 143
Query: 569 GLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGY-MA 611
G+ YL H D E KI DFGL K+ + + + + + A
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 203
Query: 612 PEWASNLPITAKVDVYSYGVVILEMVKGIRLS 643
PE + + DV+S+GVV+ E+ I S
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYELFTYIEKS 235
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG---EEVFWAEVSTIGKIYHMNLVRMW 523
+ LG G G V V AVAVK + D+ + E E+ + H N+V+ +
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEF 578
G EG + L EY L + + + + G+ YLH H +
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 579 EP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK-VDV 626
+P KI+DFGLA + + + +++ GT Y+APE A+ VDV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 627 YSYGVVILEMVKG 639
+S G+V+ M+ G
Sbjct: 191 WSCGIVLTAMLAG 203
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 20/199 (10%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
E++++ + K +LG G G VY+GV VAVK L + E F E + + +I H
Sbjct: 213 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 272
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--------SSYFLGWKERFKVALGTAK 568
NLV++ G C+ +I E++ +L +L + L + A+ +
Sbjct: 273 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 332
Query: 569 GLAYLHH----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
++H + K+ADFGL++L G + + + + APE +
Sbjct: 333 KKNFIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 391
Query: 619 PITAKVDVYSYGVVILEMV 637
+ K DV+++GV++ E+
Sbjct: 392 KFSIKSDVWAFGVLLWEIA 410
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 87/198 (43%), Gaps = 26/198 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRL-GDLHQGEEV---FWAEVSTIGKIYHMNLVRM 522
E LG GG V+ L R VAVK L DL + F E + H +V +
Sbjct: 18 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 523 WGF----CSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH---- 574
+ G ++ EYV+ +L + + + K +V + L + H
Sbjct: 78 YATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGI 137
Query: 575 -HDEFEP-----------KIADFGLAK-LSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT 621
H + +P K+ DFG+A+ ++ G++ +Q + + GT Y++PE A +
Sbjct: 138 IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVD 197
Query: 622 AKVDVYSYGVVILEMVKG 639
A+ DVYS G V+ E++ G
Sbjct: 198 ARSDVYSLGCVLYEVLTG 215
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 89/221 (40%), Gaps = 44/221 (19%)
Query: 448 SSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGV-LADGRAV----AVKRLGDL--HQG 500
+Q R ELK+ + LG G G VYKG+ + +G V A+K L + +
Sbjct: 29 QAQLRILKETELKRV-----KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKA 83
Query: 501 EEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSY 552
F E + + H +LVR+ G C +L+ + EYV + ++ S
Sbjct: 84 NVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHK--DNIGSQL 141
Query: 553 FLGWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSN 596
L W + AKG+ YL H D KI DFGLA+L +
Sbjct: 142 LLNW------CVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 195
Query: 597 SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMV 637
+ +MA E T + DV+SYGV I E++
Sbjct: 196 EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELM 236
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 38/217 (17%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKG------VLADGRAVAVKRL--GDLHQGEEVFWAEVS 509
E + + + LGRG G V + A R VAVK L G H +E+
Sbjct: 23 EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELK 82
Query: 510 TIGKI-YHMNLVRMWGFCSE-GRHRLLIYEYVEKQSLDKHLFS--SYFLGWKERFK---- 561
+ I +H+N+V + G C++ G ++I E+ + +L +L S + F+ +K+ +K
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLT 142
Query: 562 ------VALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQ 599
+ AKG+ +L H D + KI DFGLA+ + + +
Sbjct: 143 LEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVR 202
Query: 600 FSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
R +MAPE + T + DV+S+GV++ E+
Sbjct: 203 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 239
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 20/199 (10%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
E++++ + K +LG G G VY+GV VAVK L + E F E + + +I H
Sbjct: 255 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 314
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLF--------SSYFLGWKERFKVALGTAK 568
NLV++ G C+ +I E++ +L +L + L + A+ +
Sbjct: 315 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 374
Query: 569 GLAYLHH----------DEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNL 618
++H + K+ADFGL++L G + + + + APE +
Sbjct: 375 KKNFIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYN 433
Query: 619 PITAKVDVYSYGVVILEMV 637
+ K DV+++GV++ E+
Sbjct: 434 KFSIKSDVWAFGVLLWEIA 452
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 104/240 (43%), Gaps = 41/240 (17%)
Query: 446 ALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGV-LADGRA----VAVKRLGDLHQG 500
A+ R F EL+K + LG G G V+KGV + +G + V +K + D G
Sbjct: 2 AMKVLARIFKETELRKL-----KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIED-KSG 55
Query: 501 EEVFWA---EVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY-FLGW 556
+ F A + IG + H ++VR+ G C G L+ +Y+ SL H+ LG
Sbjct: 56 RQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGP 114
Query: 557 KERFKVALGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQF 600
+ + AKG+ YL + ++ADFG+A L +
Sbjct: 115 QLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLY 174
Query: 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMV-------KGIRLSNW--VVEDGE 651
S+ + +MA E T + DV+SYGV + E++ G+RL+ ++E GE
Sbjct: 175 SEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGE 234
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 443 GYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEE 502
G A +F R +A K K + +G+G G V G G VAVK + + +
Sbjct: 3 GSVAAQDEFYRSGWALNMKELKLL-QTIGKGEFGDVMLGDYR-GNKVAVKCIKN-DATAQ 59
Query: 503 VFWAEVSTIGKIYHMNLVRMWGFCSEGRHRL-LIYEYVEKQSLDKHLFSS--YFLGWKER 559
F AE S + ++ H NLV++ G E + L ++ EY+ K SL +L S LG
Sbjct: 60 AFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL 119
Query: 560 FKVALGTAKGLAYLHHDEFE----------------PKIADFGLAKLSQRGSNSSQFSQI 603
K +L + + YL + F K++DFGL K + ++ +
Sbjct: 120 LKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV- 178
Query: 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ APE + K DV+S+G+++ E+
Sbjct: 179 ----KWTAPEALREKKFSTKSDVWSFGILLWEI 207
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 39/233 (16%)
Query: 452 RRFSYAELKKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVK---RLGDLHQGEEVFWA- 506
R F EL+K + LG G G V+KGV + +G ++ + ++ + G + F A
Sbjct: 26 RIFKETELRKL-----KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAV 80
Query: 507 --EVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY-FLGWKERFKVA 563
+ IG + H ++VR+ G C G L+ +Y+ SL H+ LG +
Sbjct: 81 TDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWG 139
Query: 564 LGTAKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQFSQIRGTK 607
+ AKG+ YL + ++ADFG+A L +S+ +
Sbjct: 140 VQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 199
Query: 608 GYMAPEWASNLPITAKVDVYSYGVVILEMV-------KGIRLSNW--VVEDGE 651
+MA E T + DV+SYGV + E++ G+RL+ ++E GE
Sbjct: 200 KWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGE 252
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 98/242 (40%), Gaps = 44/242 (18%)
Query: 439 SLEEGYQALSSQFRRFSYA----ELKKSTKSFKEELGRGGSGAVYKG------VLADGRA 488
S++ L R Y E + + LGRG G V + A R
Sbjct: 2 SMDPDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRT 61
Query: 489 VAVKRL--GDLHQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSE-GRHRLLIYEYVEKQSL 544
VAVK L G H +E+ + I +H+N+V + G C++ G ++I E+ + +L
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 545 DKHL------FSSY--------FLGWKERFKVALGTAKGLAYL------HHD-------- 576
+L F Y FL + + AKG+ +L H D
Sbjct: 122 STYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILL 181
Query: 577 --EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVIL 634
+ KI DFGLA+ + + + R +MAPE + T + DV+S+GV++
Sbjct: 182 SEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 241
Query: 635 EM 636
E+
Sbjct: 242 EI 243
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 87/198 (43%), Gaps = 26/198 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRL-GDLHQGEEV---FWAEVSTIGKIYHMNLVRM 522
E LG GG V+ L R VAVK L DL + F E + H +V +
Sbjct: 18 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 523 W----GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH---- 574
+ G ++ EYV+ +L + + + K +V + L + H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGI 137
Query: 575 -HDEFEP-----------KIADFGLAK-LSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT 621
H + +P K+ DFG+A+ ++ G++ +Q + + GT Y++PE A +
Sbjct: 138 IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVD 197
Query: 622 AKVDVYSYGVVILEMVKG 639
A+ DVYS G V+ E++ G
Sbjct: 198 ARSDVYSLGCVLYEVLTG 215
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 30/203 (14%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + +++LG G G V+ VAVK + E F AE + + + H
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 70
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALG----TAKGLA-- 571
LV++ ++ +I E++ K SL L S G K+ + A+G+A
Sbjct: 71 KLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFI 127
Query: 572 ----YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEW 614
Y+H D KIADFGLA++ + ++++ G K + APE
Sbjct: 128 EQRNYIHRDLRAANILVSASLVCKIADFGLARVIE----DNEYTAREGAKFPIKWTAPEA 183
Query: 615 ASNLPITAKVDVYSYGVVILEMV 637
+ T K DV+S+G++++E+V
Sbjct: 184 INFGSFTIKSDVWSFGILLMEIV 206
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 91/207 (43%), Gaps = 30/207 (14%)
Query: 465 SFKEELGRGGSGAVYK---GVLAD--GRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYH 516
F ++LG+G G+V L D G VAVK+L H EE F E+ + + H
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 73
Query: 517 MNLVRMWGFC-SEGRHRL-LIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYL 573
N+V+ G C S GR L LI EY+ SL +L + + + + + KG+ YL
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL 133
Query: 574 ------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGY-MAPEWAS 616
H D E KI DFGL K+ + + + + + APE +
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 617 NLPITAKVDVYSYGVVILEMVKGIRLS 643
+ DV+S+GVV+ E+ I S
Sbjct: 194 ESKFSVASDVWSFGVVLYELFTYIEKS 220
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 30/203 (14%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + +++LG G G V+ VAVK + E F AE + + + H
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 243
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALG----TAKGLA-- 571
LV++ ++ +I E++ K SL L S G K+ + A+G+A
Sbjct: 244 KLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFI 300
Query: 572 ----YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEW 614
Y+H D KIADFGLA++ + ++++ G K + APE
Sbjct: 301 EQRNYIHRDLRAANILVSASLVCKIADFGLARVIE----DNEYTAREGAKFPIKWTAPEA 356
Query: 615 ASNLPITAKVDVYSYGVVILEMV 637
+ T K DV+S+G++++E+V
Sbjct: 357 INFGSFTIKSDVWSFGILLMEIV 379
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 90/215 (41%), Gaps = 46/215 (21%)
Query: 465 SFKEELGRGGSGAVYK---GVLAD--GRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYH 516
F ++LG+G G+V L D G VAVK+L H EE F E+ + + H
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 70
Query: 517 MNLVRMWGFC-SEGRHRL-LIYEYVEKQSLDKHLFSSYFLGWKER------FKVALGTAK 568
N+V+ G C S GR L LI EY+ SL Y KER + K
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSL-----RDYLQKHKERIDHIKLLQYTSQICK 125
Query: 569 GLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG---- 608
G+ YL H D E KI DFGL K+ +F +++
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEFFKVKEPGESPIF 182
Query: 609 YMAPEWASNLPITAKVDVYSYGVVILEMVKGIRLS 643
+ APE + + DV+S+GVV+ E+ I S
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 217
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 93/220 (42%), Gaps = 41/220 (18%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKG------VLADGRAVAVKRL--GDLHQGEEVFWAEVS 509
E + + + LGRG G V + A R VAVK L G H +E+
Sbjct: 24 EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 83
Query: 510 TIGKI-YHMNLVRMWGFCSE-GRHRLLIYEYVEKQSLDKHL------FSSY--------- 552
+ I +H+N+V + G C++ G ++I E+ + +L +L F Y
Sbjct: 84 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKD 143
Query: 553 FLGWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSN 596
FL + + AKG+ +L H D + KI DFGLA+ + +
Sbjct: 144 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 203
Query: 597 SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ R +MAPE + T + DV+S+GV++ E+
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 88/195 (45%), Gaps = 16/195 (8%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ +F +ELG G G V G VA+K + + E+ F E + + H
Sbjct: 5 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE 64
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHD 576
LV+++G C++ R +I EY+ L +L + ++ ++ + + YL
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 124
Query: 577 EFEPK--------IADFGLAKLSQRGSN----SSQFSQIRGTK---GYMAPEWASNLPIT 621
+F + + D G+ K+S G + +++ RG+K + PE +
Sbjct: 125 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFS 184
Query: 622 AKVDVYSYGVVILEM 636
+K D++++GV++ E+
Sbjct: 185 SKSDIWAFGVLMWEI 199
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 81/213 (38%), Gaps = 34/213 (15%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDL--HQGEEVFWAEVS 509
E+ + + LG G G VY+G ++ VAVK L ++ Q E F E
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY-------FLGWKERFKV 562
I K+ H N+VR G + R ++ E + L L + L + V
Sbjct: 101 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 563 ALGTAKGLAYLHHDEF-------------------EPKIADFGLAKLSQRGSNSSQFSQI 603
A A G YL + F KI DFG+A+ R S +
Sbjct: 161 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 220
Query: 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+M PE T+K D +S+GV++ E+
Sbjct: 221 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 81/213 (38%), Gaps = 34/213 (15%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDL--HQGEEVFWAEVS 509
E+ + + LG G G VY+G ++ VAVK L ++ Q E F E
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY-------FLGWKERFKV 562
I K+ H N+VR G + R ++ E + L L + L + V
Sbjct: 87 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 563 ALGTAKGLAYLHHDEF-------------------EPKIADFGLAKLSQRGSNSSQFSQI 603
A A G YL + F KI DFG+A+ R S +
Sbjct: 147 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 206
Query: 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+M PE T+K D +S+GV++ E+
Sbjct: 207 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 87/198 (43%), Gaps = 26/198 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRL-GDLHQGEEV---FWAEVSTIGKIYHMNLVRM 522
E LG GG V+ L R VAVK L DL + F E + H +V +
Sbjct: 35 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 94
Query: 523 W----GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH---- 574
+ G ++ EYV+ +L + + + K +V + L + H
Sbjct: 95 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGI 154
Query: 575 -HDEFEP-----------KIADFGLAK-LSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT 621
H + +P K+ DFG+A+ ++ G++ +Q + + GT Y++PE A +
Sbjct: 155 IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVD 214
Query: 622 AKVDVYSYGVVILEMVKG 639
A+ DVYS G V+ E++ G
Sbjct: 215 ARSDVYSLGCVLYEVLTG 232
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 81/213 (38%), Gaps = 34/213 (15%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDLH--QGEEVFWAEVS 509
E+ + + LG G G VY+G ++ VAVK L +++ Q E F E
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEAL 100
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY-------FLGWKERFKV 562
I K H N+VR G + R ++ E + L L + L + V
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 563 ALGTAKGLAYLHHDEF-------------------EPKIADFGLAKLSQRGSNSSQFSQI 603
A A G YL + F KI DFG+A+ R S +
Sbjct: 161 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 220
Query: 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+M PE T+K D +S+GV++ E+
Sbjct: 221 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 23/152 (15%)
Query: 507 EVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGT 566
E++ + KI H N+V + H L+ + V L + K+ V
Sbjct: 56 EIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQV 115
Query: 567 AKGLAYLH-----HDEFEPK--------------IADFGLAKLSQRGSNSSQFSQIRGTK 607
+ YLH H + +P+ I DFGL+K+ Q G S+ GT
Sbjct: 116 LSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTAC----GTP 171
Query: 608 GYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
GY+APE + P + VD +S GV+ ++ G
Sbjct: 172 GYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 34/200 (17%)
Query: 467 KEELGRGGSGAVYK------GVLADGRAVAVKRLG--DLHQGEEVFWAEVSTIGKIYHMN 518
KEELG+G V + G+ + + K+L D + E E K+ H N
Sbjct: 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER----EARICRKLQHPN 66
Query: 519 LVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH---- 574
+VR+ E L+++ V L + + + F + + +AY H
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 126
Query: 575 -HDEFEP--------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
H +P K+ADFGLA ++S + GT GY++PE P
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 620 ITAKVDVYSYGVVILEMVKG 639
+ VD+++ GV++ ++ G
Sbjct: 184 YSKPVDIWACGVILYILLVG 203
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 34/200 (17%)
Query: 467 KEELGRGGSGAVYK------GVLADGRAVAVKRLG--DLHQGEEVFWAEVSTIGKIYHMN 518
KEELG+G V + G+ + + K+L D + E E K+ H N
Sbjct: 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER----EARICRKLQHPN 66
Query: 519 LVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH---- 574
+VR+ E L+++ V L + + + F + + +AY H
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 126
Query: 575 -HDEFEP--------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
H +P K+ADFGLA ++S + GT GY++PE P
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 620 ITAKVDVYSYGVVILEMVKG 639
+ VD+++ GV++ ++ G
Sbjct: 184 YSKPVDIWACGVILYILLVG 203
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 34/200 (17%)
Query: 467 KEELGRGGSGAVYK------GVLADGRAVAVKRLG--DLHQGEEVFWAEVSTIGKIYHMN 518
KEELG+G V + G+ + + K+L D + E E K+ H N
Sbjct: 10 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER----EARICRKLQHPN 65
Query: 519 LVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH---- 574
+VR+ E L+++ V L + + + F + + +AY H
Sbjct: 66 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 125
Query: 575 -HDEFEP--------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
H +P K+ADFGLA ++S + GT GY++PE P
Sbjct: 126 VHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPEVLKKDP 182
Query: 620 ITAKVDVYSYGVVILEMVKG 639
+ VD+++ GV++ ++ G
Sbjct: 183 YSKPVDIWACGVILYILLVG 202
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 42/221 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKG------VLADGRAVAVKRL--GDLHQGEEVFWAEVS 509
E + + LGRG G V + A R VAVK L G H +E+
Sbjct: 23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 82
Query: 510 TIGKI-YHMNLVRMWGFCSE-GRHRLLIYEYVEKQSLDKHL------FSSY--------- 552
+ I +H+N+V + G C++ G ++I E+ + +L +L F Y
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 142
Query: 553 -FLGWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGS 595
FL + + AKG+ +L H D + KI DFGLA+ +
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 202
Query: 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ + R +MAPE + T + DV+S+GV++ E+
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 88/212 (41%), Gaps = 40/212 (18%)
Query: 465 SFKEELGRGGSGAVYK---GVLAD--GRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYH 516
F +LG+G G+V L D G VAVK+L H EE F E+ + + H
Sbjct: 16 KFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 73
Query: 517 MNLVRMWGFC-SEGRHRL-LIYEYVEKQSLDKHLFSSYFLGWKER------FKVALGTAK 568
N+V+ G C S GR L LI E++ SL Y KER + K
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEFLPYGSL-----REYLQKHKERIDHIKLLQYTSQICK 128
Query: 569 GLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGY-MA 611
G+ YL H D E KI DFGL K+ + + + + + A
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 612 PEWASNLPITAKVDVYSYGVVILEMVKGIRLS 643
PE + + DV+S+GVV+ E+ I S
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFTYIEKS 220
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 23/191 (12%)
Query: 470 LGRGGSGAVYKGVLAD-GRAVAVKRL---GDLHQGEEVFWAEVSTIGKIYHMNLVRMWGF 525
+G G G V K D GR VA+K+ D +++ E+ + ++ H NLV +
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 526 CSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFEP 580
C + + L++E+V+ LD L ++ K G+ + H H + +P
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKP 152
Query: 581 -----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-WASNLPITAKVDVYS 628
K+ DFG A+ + + T+ Y APE ++ VDV++
Sbjct: 153 ENILVSQSGVVKLCDFGFAR--TLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWA 210
Query: 629 YGVVILEMVKG 639
G ++ EM G
Sbjct: 211 IGCLVTEMFMG 221
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 80/213 (37%), Gaps = 34/213 (15%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDL--HQGEEVFWAEVS 509
E+ + + LG G G VY+G ++ VAVK L ++ Q E F E
Sbjct: 18 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 77
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY-------FLGWKERFKV 562
I K H N+VR G + R ++ E + L L + L + V
Sbjct: 78 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 137
Query: 563 ALGTAKGLAYLHHDEF-------------------EPKIADFGLAKLSQRGSNSSQFSQI 603
A A G YL + F KI DFG+A+ R S +
Sbjct: 138 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 197
Query: 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+M PE T+K D +S+GV++ E+
Sbjct: 198 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 230
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 26/188 (13%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCS 527
+ +G+G G V G G VAVK + + + F AE S + ++ H NLV++ G
Sbjct: 18 QTIGKGEFGDVMLGDYR-GNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLLGVIV 75
Query: 528 EGRHRL-LIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDEFE----- 579
E + L ++ EY+ K SL +L S LG K +L + + YL + F
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLA 135
Query: 580 -----------PKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
K++DFGL K + ++ + + APE + K DV+S
Sbjct: 136 ARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV-----KWTAPEALREAAFSTKSDVWS 190
Query: 629 YGVVILEM 636
+G+++ E+
Sbjct: 191 FGILLWEI 198
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 80/213 (37%), Gaps = 34/213 (15%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDL--HQGEEVFWAEVS 509
E+ + + LG G G VY+G ++ VAVK L ++ Q E F E
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY-------FLGWKERFKV 562
I K H N+VR G + R ++ E + L L + L + V
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 563 ALGTAKGLAYLHHDEF-------------------EPKIADFGLAKLSQRGSNSSQFSQI 603
A A G YL + F KI DFG+A+ R S +
Sbjct: 147 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 206
Query: 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+M PE T+K D +S+GV++ E+
Sbjct: 207 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 80/213 (37%), Gaps = 34/213 (15%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDL--HQGEEVFWAEVS 509
E+ + + LG G G VY+G ++ VAVK L ++ Q E F E
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY-------FLGWKERFKV 562
I K H N+VR G + R ++ E + L L + L + V
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 563 ALGTAKGLAYLHHDEF-------------------EPKIADFGLAKLSQRGSNSSQFSQI 603
A A G YL + F KI DFG+A+ R S +
Sbjct: 161 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 220
Query: 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+M PE T+K D +S+GV++ E+
Sbjct: 221 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 80/213 (37%), Gaps = 34/213 (15%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDL--HQGEEVFWAEVS 509
E+ + + LG G G VY+G ++ VAVK L ++ Q E F E
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY-------FLGWKERFKV 562
I K H N+VR G + R ++ E + L L + L + V
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 563 ALGTAKGLAYLHHDEF-------------------EPKIADFGLAKLSQRGSNSSQFSQI 603
A A G YL + F KI DFG+A+ R S +
Sbjct: 146 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 205
Query: 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+M PE T+K D +S+GV++ E+
Sbjct: 206 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 80/213 (37%), Gaps = 34/213 (15%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDL--HQGEEVFWAEVS 509
E+ + + LG G G VY+G ++ VAVK L ++ Q E F E
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY-------FLGWKERFKV 562
I K H N+VR G + R ++ E + L L + L + V
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 563 ALGTAKGLAYLHHDEF-------------------EPKIADFGLAKLSQRGSNSSQFSQI 603
A A G YL + F KI DFG+A+ R S +
Sbjct: 146 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 205
Query: 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+M PE T+K D +S+GV++ E+
Sbjct: 206 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 80/213 (37%), Gaps = 34/213 (15%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDL--HQGEEVFWAEVS 509
E+ + + LG G G VY+G ++ VAVK L ++ Q E F E
Sbjct: 33 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 92
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY-------FLGWKERFKV 562
I K H N+VR G + R ++ E + L L + L + V
Sbjct: 93 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 152
Query: 563 ALGTAKGLAYLHHDEF-------------------EPKIADFGLAKLSQRGSNSSQFSQI 603
A A G YL + F KI DFG+A+ R S +
Sbjct: 153 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 212
Query: 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+M PE T+K D +S+GV++ E+
Sbjct: 213 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 245
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 80/213 (37%), Gaps = 34/213 (15%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDL--HQGEEVFWAEVS 509
E+ + + LG G G VY+G ++ VAVK L ++ Q E F E
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY-------FLGWKERFKV 562
I K H N+VR G + R ++ E + L L + L + V
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 563 ALGTAKGLAYLHHDEF-------------------EPKIADFGLAKLSQRGSNSSQFSQI 603
A A G YL + F KI DFG+A+ R S +
Sbjct: 147 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCA 206
Query: 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+M PE T+K D +S+GV++ E+
Sbjct: 207 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 91/229 (39%), Gaps = 39/229 (17%)
Query: 431 FRRQDVPSSLEEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLADGRAVA 490
FR++DV E G + S QF A ++K + G+G Y R ++
Sbjct: 5 FRQEDVEDHYEMGEELGSGQF-----AIVRKCRQK--------GTGKEYAAKFIKKRRLS 51
Query: 491 VKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS 550
R G E EV+ + +I H N++ + +LI E V L L
Sbjct: 52 SSRRG---VSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE 108
Query: 551 SYFLGWKERFKVALGTAKGLAYLH-----HDEFEP---------------KIADFGLAKL 590
L E + G+ YLH H + +P K+ DFG+A
Sbjct: 109 KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 168
Query: 591 SQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
+ G+ +F I GT ++APE + P+ + D++S GV+ ++ G
Sbjct: 169 IEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 89/222 (40%), Gaps = 39/222 (17%)
Query: 450 QFRRFSYAELKKSTK-----SFKEELGRGGSGAVYK------GVLADGRAVAVKRLG--D 496
Q R S + STK KEELG+G V + G+ + + K+L D
Sbjct: 12 QMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD 71
Query: 497 LHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW 556
+ E E K+ H N+VR+ E L+++ V L + + + F
Sbjct: 72 FQKLER----EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE 127
Query: 557 KERFKVALGTAKGLAYLH-----HDEFEP--------------KIADFGLAKLSQRGSNS 597
+ + +AY H H +P K+ADFGLA ++S
Sbjct: 128 ADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDS 184
Query: 598 SQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
+ GT GY++PE P + VD+++ GV++ ++ G
Sbjct: 185 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 42/221 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKG------VLADGRAVAVKRL--GDLHQGEEVFWAEVS 509
E + + LGRG G V + A R VAVK L G H +E+
Sbjct: 23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 82
Query: 510 TIGKI-YHMNLVRMWGFCSE-GRHRLLIYEYVEKQSLDKHL------FSSY--------- 552
+ I +H+N+V + G C++ G ++I E+ + +L +L F Y
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 142
Query: 553 -FLGWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGS 595
FL + + AKG+ +L H D + KI DFGLA+ +
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 202
Query: 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ + R +MAPE + T + DV+S+GV++ E+
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 80/213 (37%), Gaps = 34/213 (15%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDL--HQGEEVFWAEVS 509
E+ + + LG G G VY+G ++ VAVK L ++ Q E F E
Sbjct: 43 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 102
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY-------FLGWKERFKV 562
I K H N+VR G + R ++ E + L L + L + V
Sbjct: 103 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 162
Query: 563 ALGTAKGLAYLHHDEF-------------------EPKIADFGLAKLSQRGSNSSQFSQI 603
A A G YL + F KI DFG+A+ R S +
Sbjct: 163 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 222
Query: 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+M PE T+K D +S+GV++ E+
Sbjct: 223 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 255
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 28/204 (13%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMWG 524
E++G G G VYK G A+K++ + E + E+S + ++ H N+V+++
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVA---LGTAKGLAYLH-----HD 576
+ +L++E+++ Q L K L G E L G+AY H H
Sbjct: 68 VIHTKKRLVLVFEHLD-QDLKKLL--DVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHR 124
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-WASNLPITAKV 624
+ +P KIADFGLA+ G +++ T Y AP+ + + +
Sbjct: 125 DLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTI 182
Query: 625 DVYSYGVVILEMVKGIRLSNWVVE 648
D++S G + EMV G L V E
Sbjct: 183 DIWSVGCIFAEMVNGTPLFPGVSE 206
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 26/188 (13%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCS 527
+ +G+G G V G G VAVK + + + F AE S + ++ H NLV++ G
Sbjct: 12 QTIGKGEFGDVMLGDYR-GNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLLGVIV 69
Query: 528 EGRHRL-LIYEYVEKQSLDKHLFSS--YFLGWKERFKVALGTAKGLAYLHHDEFE----- 579
E + L ++ EY+ K SL +L S LG K +L + + YL + F
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLA 129
Query: 580 -----------PKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
K++DFGL K + ++ + + APE + K DV+S
Sbjct: 130 ARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV-----KWTAPEALREKKFSTKSDVWS 184
Query: 629 YGVVILEM 636
+G+++ E+
Sbjct: 185 FGILLWEI 192
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 42/221 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKG------VLADGRAVAVKRL--GDLHQGEEVFWAEVS 509
E + + LGRG G V + A R VAVK L G H +E+
Sbjct: 14 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 73
Query: 510 TIGKI-YHMNLVRMWGFCSE-GRHRLLIYEYVEKQSLDKHL------FSSY--------- 552
+ I +H+N+V + G C++ G ++I E+ + +L +L F Y
Sbjct: 74 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 553 -FLGWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGS 595
FL + + AKG+ +L H D + KI DFGLA+ +
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 193
Query: 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ + R +MAPE + T + DV+S+GV++ E+
Sbjct: 194 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 74/188 (39%), Gaps = 28/188 (14%)
Query: 469 ELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSE 528
L R Y + + + V+ H +E + T H ++RMWG +
Sbjct: 23 HLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT-----HPFIIRMWGTFQD 77
Query: 529 GRHRLLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKGLAYLH-----HDEFEP-- 580
+ +I +Y+E L L S F +F A L YLH + + +P
Sbjct: 78 AQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAA-EVCLALEYLHSKDIIYRDLKPEN 136
Query: 581 ---------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGV 631
KI DFG AK + + GT Y+APE S P +D +S+G+
Sbjct: 137 ILLDKNGHIKITDFGFAKYVPDVT-----YXLCGTPDYIAPEVVSTKPYNKSIDWWSFGI 191
Query: 632 VILEMVKG 639
+I EM+ G
Sbjct: 192 LIYEMLAG 199
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 28/204 (13%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMWG 524
E++G G G VYK G A+K++ + E + E+S + ++ H N+V+++
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVA---LGTAKGLAYLH-----HD 576
+ +L++E+++ Q L K L G E L G+AY H H
Sbjct: 68 VIHTKKRLVLVFEHLD-QDLKKLL--DVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHR 124
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-WASNLPITAKV 624
+ +P KIADFGLA+ G +++ T Y AP+ + + +
Sbjct: 125 DLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTI 182
Query: 625 DVYSYGVVILEMVKGIRLSNWVVE 648
D++S G + EMV G L V E
Sbjct: 183 DIWSVGCIFAEMVNGTPLFPGVSE 206
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 91/218 (41%), Gaps = 44/218 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD---GRA---VAVKRLGDLHQGEE--VFWAEVS 509
E+ + + ELG+G G VY+G D G A VAVK + + E F E S
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLG----------WKER 559
+ ++VR+ G S+G+ L++ E + L +L S +E
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 560 FKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQI 603
++A A G+AYL H D +F KI DFG+ +
Sbjct: 133 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR----- 187
Query: 604 RGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEM 636
+G KG +MAPE + T D++S+GVV+ E+
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 89/212 (41%), Gaps = 40/212 (18%)
Query: 465 SFKEELGRGGSGAVYK---GVLAD--GRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYH 516
F ++LG+G G+V L D G VAVK+L H EE F E+ + + H
Sbjct: 14 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDFEREIEILKSLQH 71
Query: 517 MNLVRMWGFC-SEGRHRL-LIYEYVEKQSLDKHLFSSYFLGWKER------FKVALGTAK 568
N+V+ G C S GR L LI EY+ SL Y KER + K
Sbjct: 72 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSL-----RDYLQKHKERIDHIKLLQYTSQICK 126
Query: 569 GLAYL------H----------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGY-MA 611
G+ YL H +E KI DFGL K+ + + + + + A
Sbjct: 127 GMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYA 186
Query: 612 PEWASNLPITAKVDVYSYGVVILEMVKGIRLS 643
PE + + DV+S+GVV+ E+ I S
Sbjct: 187 PESLTESKFSVASDVWSFGVVLYELFTYIEKS 218
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 28/204 (13%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMWG 524
E++G G G VYK G A+K++ + E + E+S + ++ H N+V+++
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVA---LGTAKGLAYLH-----HD 576
+ +L++E+++ Q L K L G E L G+AY H H
Sbjct: 68 VIHTKKRLVLVFEHLD-QDLKKLL--DVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHR 124
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-WASNLPITAKV 624
+ +P KIADFGLA+ G +++ T Y AP+ + + +
Sbjct: 125 DLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTI 182
Query: 625 DVYSYGVVILEMVKGIRLSNWVVE 648
D++S G + EMV G L V E
Sbjct: 183 DIWSVGCIFAEMVNGAPLFPGVSE 206
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 91/218 (41%), Gaps = 44/218 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD---GRA---VAVKRLGDLHQGEE--VFWAEVS 509
E+ + + ELG+G G VY+G D G A VAVK + + E F E S
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLG----------WKER 559
+ ++VR+ G S+G+ L++ E + L +L S +E
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 560 FKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQI 603
++A A G+AYL H D +F KI DFG+ +
Sbjct: 133 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR----- 187
Query: 604 RGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEM 636
+G KG +MAPE + T D++S+GVV+ E+
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 91/218 (41%), Gaps = 44/218 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD---GRA---VAVKRLGDLHQGEE--VFWAEVS 509
E+ + + ELG+G G VY+G D G A VAVK + + E F E S
Sbjct: 10 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 69
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLG----------WKER 559
+ ++VR+ G S+G+ L++ E + L +L S +E
Sbjct: 70 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 129
Query: 560 FKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQI 603
++A A G+AYL H D +F KI DFG+ +
Sbjct: 130 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR----- 184
Query: 604 RGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEM 636
+G KG +MAPE + T D++S+GVV+ E+
Sbjct: 185 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 42/221 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKG------VLADGRAVAVKRL--GDLHQGEEVFWAEVS 509
E + + LGRG G V + A R VAVK L G H +E+
Sbjct: 14 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 73
Query: 510 TIGKI-YHMNLVRMWGFCSE-GRHRLLIYEYVEKQSLDKHL------FSSY--------- 552
+ I +H+N+V + G C++ G ++I E+ + +L +L F Y
Sbjct: 74 ILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 553 -FLGWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGS 595
FL + + AKG+ +L H D + KI DFGLA+ +
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 193
Query: 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ + R +MAPE + T + DV+S+GV++ E+
Sbjct: 194 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 44/218 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVY----KGVLADGRA--VAVKRLGDLHQGEE--VFWAEVS 509
E+ + + ELG+G G VY KGV+ D VA+K + + E F E S
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS-------SYFLG---WKER 559
+ + ++VR+ G S+G+ L+I E + + L +L S + L +
Sbjct: 74 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 133
Query: 560 FKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQI 603
++A A G+AYL H D +F KI DFG+ R + + +
Sbjct: 134 IQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT----RDIYETDYYR- 188
Query: 604 RGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEM 636
+G KG +M+PE + T DV+S+GVV+ E+
Sbjct: 189 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 42/221 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKG------VLADGRAVAVKRL--GDLHQGEEVFWAEVS 509
E + + LGRG G V + A R VAVK L G H +E+
Sbjct: 23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 82
Query: 510 TIGKI-YHMNLVRMWGFCSE-GRHRLLIYEYVEKQSLDKHL------FSSY--------- 552
+ I +H+N+V + G C++ G ++I E+ + +L +L F Y
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 142
Query: 553 -FLGWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGS 595
FL + + AKG+ +L H D + KI DFGLA+ +
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 202
Query: 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ + R +MAPE + T + DV+S+GV++ E+
Sbjct: 203 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 44/218 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD---GRA---VAVKRLGDLHQGEE--VFWAEVS 509
E+ + + ELG+G G VY+G D G A VAVK + + E F E S
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLG----------WKER 559
+ ++VR+ G S+G+ L++ E + L +L S +E
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 560 FKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQI 603
++A A G+AYL H D +F KI DFG+ R + + +
Sbjct: 133 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT----RDIYETDYYR- 187
Query: 604 RGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEM 636
+G KG +MAPE + T D++S+GVV+ E+
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 44/218 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVY----KGVLADGRA--VAVKRLGDLHQGEE--VFWAEVS 509
E+ + + ELG+G G VY KGV+ D VA+K + + E F E S
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS-------SYFLG---WKER 559
+ + ++VR+ G S+G+ L+I E + + L +L S + L +
Sbjct: 81 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 140
Query: 560 FKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQI 603
++A A G+AYL H D +F KI DFG+ R + + +
Sbjct: 141 IQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT----RDIYETDYYR- 195
Query: 604 RGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEM 636
+G KG +M+PE + T DV+S+GVV+ E+
Sbjct: 196 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 94/218 (43%), Gaps = 44/218 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVY----KGVLADGRA--VAVKRLGDLHQGEE--VFWAEVS 509
E+ + + ELG+G G VY KGV+ D VA+K + + E F E S
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 65
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS-------SYFLG---WKER 559
+ + ++VR+ G S+G+ L+I E + + L +L S + L +
Sbjct: 66 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 125
Query: 560 FKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQI 603
++A A G+AYL H D +F KI DFG+ +
Sbjct: 126 IQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR----- 180
Query: 604 RGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEM 636
+G KG +M+PE + T DV+S+GVV+ E+
Sbjct: 181 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 44/218 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVY----KGVLADGRA--VAVKRLGDLHQGEE--VFWAEVS 509
E+ + + ELG+G G VY KGV+ D VA+K + + E F E S
Sbjct: 12 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 71
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS-------SYFLG---WKER 559
+ + ++VR+ G S+G+ L+I E + + L +L S + L +
Sbjct: 72 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 131
Query: 560 FKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQI 603
++A A G+AYL H D +F KI DFG+ R + + +
Sbjct: 132 IQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT----RDIYETDYYR- 186
Query: 604 RGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEM 636
+G KG +M+PE + T DV+S+GVV+ E+
Sbjct: 187 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 44/218 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVY----KGVLADGRA--VAVKRLGDLHQGEE--VFWAEVS 509
E+ + + ELG+G G VY KGV+ D VA+K + + E F E S
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS-------SYFLG---WKER 559
+ + ++VR+ G S+G+ L+I E + + L +L S + L +
Sbjct: 81 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 140
Query: 560 FKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQI 603
++A A G+AYL H D +F KI DFG+ R + + +
Sbjct: 141 IQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT----RDIYETDYYR- 195
Query: 604 RGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEM 636
+G KG +M+PE + T DV+S+GVV+ E+
Sbjct: 196 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 44/218 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVY----KGVLADGRA--VAVKRLGDLHQGEE--VFWAEVS 509
E+ + + ELG+G G VY KGV+ D VA+K + + E F E S
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS-------SYFLG---WKER 559
+ + ++VR+ G S+G+ L+I E + + L +L S + L +
Sbjct: 75 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 134
Query: 560 FKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQI 603
++A A G+AYL H D +F KI DFG+ R + + +
Sbjct: 135 IQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT----RDIYETDYYR- 189
Query: 604 RGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEM 636
+G KG +M+PE + T DV+S+GVV+ E+
Sbjct: 190 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 94/218 (43%), Gaps = 44/218 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVY----KGVLADGRA--VAVKRLGDLHQGEE--VFWAEVS 509
E+ + + ELG+G G VY KGV+ D VA+K + + E F E S
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS-------SYFLG---WKER 559
+ + ++VR+ G S+G+ L+I E + + L +L S + L +
Sbjct: 75 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 134
Query: 560 FKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQI 603
++A A G+AYL H D +F KI DFG+ +
Sbjct: 135 IQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR----- 189
Query: 604 RGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEM 636
+G KG +M+PE + T DV+S+GVV+ E+
Sbjct: 190 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 44/218 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVY----KGVLADGRA--VAVKRLGDLHQGEE--VFWAEVS 509
E+ + + ELG+G G VY KGV+ D VA+K + + E F E S
Sbjct: 11 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 70
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS-------SYFLG---WKER 559
+ + ++VR+ G S+G+ L+I E + + L +L S + L +
Sbjct: 71 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 130
Query: 560 FKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQI 603
++A A G+AYL H D +F KI DFG+ R + + +
Sbjct: 131 IQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT----RDIYETDYYR- 185
Query: 604 RGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEM 636
+G KG +M+PE + T DV+S+GVV+ E+
Sbjct: 186 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 44/218 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVY----KGVLADGRA--VAVKRLGDLHQGEE--VFWAEVS 509
E+ + + ELG+G G VY KGV+ D VA+K + + E F E S
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS-------SYFLG---WKER 559
+ + ++VR+ G S+G+ L+I E + + L +L S + L +
Sbjct: 74 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 133
Query: 560 FKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQI 603
++A A G+AYL H D +F KI DFG+ R + + +
Sbjct: 134 IQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT----RDIYETDYYR- 188
Query: 604 RGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEM 636
+G KG +M+PE + T DV+S+GVV+ E+
Sbjct: 189 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 80/213 (37%), Gaps = 34/213 (15%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDL--HQGEEVFWAEVS 509
E+ + + LG G G VY+G ++ VAVK L ++ Q E F E
Sbjct: 53 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 112
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY-------FLGWKERFKV 562
I K H N+VR G + R ++ E + L L + L + V
Sbjct: 113 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 172
Query: 563 ALGTAKGLAYLHHDEF-------------------EPKIADFGLAKLSQRGSNSSQFSQI 603
A A G YL + F KI DFG+A+ R S +
Sbjct: 173 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 232
Query: 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+M PE T+K D +S+GV++ E+
Sbjct: 233 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 265
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 94/234 (40%), Gaps = 48/234 (20%)
Query: 447 LSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVL---ADG---RAVAVKRLGDLHQG 500
L +Q ++ E+ S F EELG G VYKG L A G +AVA+K L D +G
Sbjct: 11 LINQHKQAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEG 70
Query: 501 --EEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS-------- 550
E F E ++ H N+V + G ++ + +I+ Y L + L
Sbjct: 71 PLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVG 130
Query: 551 --------SYFLGWKERFKVALGTAKGLAYL--HH--------------DEFEPKIADFG 586
L + + A G+ YL HH D+ KI+D G
Sbjct: 131 STDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLG 190
Query: 587 LAKLSQRGSNSSQFSQIRGTK----GYMAPEWASNLPITAKVDVYSYGVVILEM 636
L R ++ + ++ G +MAPE + D++SYGVV+ E+
Sbjct: 191 LF----REVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEV 240
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 52/254 (20%)
Query: 430 LFRRQDVPSSLEEGYQALSSQFRRFSYA--------ELKKSTKSFKEELGRGGSGAVY-- 479
+F R+ S L G S FS A E+ + + ELG+G G VY
Sbjct: 7 VFHRKRNNSRLGNGVLYASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEG 66
Query: 480 --KGVLADGRA--VAVKRLGDLHQGEE--VFWAEVSTIGKIYHMNLVRMWGFCSEGRHRL 533
KGV+ D VA+K + + E F E S + + ++VR+ G S+G+ L
Sbjct: 67 VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 126
Query: 534 LIYEYVEKQSLDKHLFS-------SYFLG---WKERFKVALGTAKGLAYL------HHD- 576
+I E + + L +L S + L + ++A A G+AYL H D
Sbjct: 127 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 186
Query: 577 ---------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKG-----YMAPEWASNLPITA 622
+F KI DFG+ R + + + +G KG +M+PE + T
Sbjct: 187 AARNCMVAEDFTVKIGDFGMT----RDIYETDYYR-KGGKGLLPVRWMSPESLKDGVFTT 241
Query: 623 KVDVYSYGVVILEM 636
DV+S+GVV+ E+
Sbjct: 242 YSDVWSFGVVLWEI 255
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 44/218 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVY----KGVLADGRA--VAVKRLGDLHQGEE--VFWAEVS 509
E+ + + ELG+G G VY KGV+ D VA+K + + E F E S
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS-------SYFLG---WKER 559
+ + ++VR+ G S+G+ L+I E + + L +L S + L +
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 560 FKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQI 603
++A A G+AYL H D +F KI DFG+ R + + +
Sbjct: 128 IQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT----RDIYETDYYR- 182
Query: 604 RGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEM 636
+G KG +M+PE + T DV+S+GVV+ E+
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 44/218 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVY----KGVLADGRA--VAVKRLGDLHQGEE--VFWAEVS 509
E+ + + ELG+G G VY KGV+ D VA+K + + E F E S
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS-------SYFLG---WKER 559
+ + ++VR+ G S+G+ L+I E + + L +L S + L +
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 560 FKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQI 603
++A A G+AYL H D +F KI DFG+ R + + +
Sbjct: 128 IQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMT----RDIYETDYYR- 182
Query: 604 RGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEM 636
+G KG +M+PE + T DV+S+GVV+ E+
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 44/218 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD---GRA---VAVKRLGDLHQGEE--VFWAEVS 509
E+ + + ELG+G G VY+G D G A VAVK + + E F E S
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLG----------WKER 559
+ ++VR+ G S+G+ L++ E + L +L S +E
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 560 FKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQI 603
++A A G+AYL H D +F KI DFG+ R + + +
Sbjct: 133 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT----RDIYETAYYR- 187
Query: 604 RGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEM 636
+G KG +MAPE + T D++S+GVV+ E+
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 44/218 (20%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD---GRA---VAVKRLGDLHQGEE--VFWAEVS 509
E+ + + ELG+G G VY+G D G A VAVK + + E F E S
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 71
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLG----------WKER 559
+ ++VR+ G S+G+ L++ E + L +L S +E
Sbjct: 72 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 131
Query: 560 FKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQI 603
++A A G+AYL H D +F KI DFG+ R + + +
Sbjct: 132 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT----RDIYETDYYR- 186
Query: 604 RGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEM 636
+G KG +MAPE + T D++S+GVV+ E+
Sbjct: 187 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 59/231 (25%)
Query: 465 SFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLV---- 520
+ E +G+G G V++G L G +VAVK + E+ + H N++
Sbjct: 11 ALVECVGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIA 69
Query: 521 ----------RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGL 570
++W H L Y+++++Q+L+ HL ++A+ A GL
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGSL-YDFLQRQTLEPHL----------ALRLAVSAACGL 118
Query: 571 AYLH-------------HDEFEPK-----------IADFGLAKLSQRGSNSSQF--SQIR 604
A+LH H +F+ + IAD GLA + +GS+ +
Sbjct: 119 AHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV 178
Query: 605 GTKGYMAPEWASNLPIT------AKVDVYSYGVVILEMVKGIRLSNWVVED 649
GTK YMAPE T D++++G+V+ E+ + + N +VED
Sbjct: 179 GTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRT-IVNGIVED 228
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 42/221 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKG------VLADGRAVAVKRL--GDLHQGEEVFWAEVS 509
E + + LGRG G V + A R VAVK L G H +E+
Sbjct: 25 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 84
Query: 510 TIGKI-YHMNLVRMWGFCSE-GRHRLLIYEYVEKQSLDKHL------FSSY--------- 552
+ I +H+N+V + G C++ G ++I E+ + +L +L F Y
Sbjct: 85 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYK 144
Query: 553 -FLGWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGS 595
FL + + AKG+ +L H D + KI DFGLA+ +
Sbjct: 145 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 204
Query: 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ + R +MAPE + T + DV+S+GV++ E+
Sbjct: 205 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 245
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 42/221 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKG------VLADGRAVAVKRL--GDLHQGEEVFWAEVS 509
E + + LGRG G V + A R VAVK L G H +E+
Sbjct: 60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 119
Query: 510 TIGKI-YHMNLVRMWGFCSE-GRHRLLIYEYVEKQSLDKHL------FSSY--------- 552
+ I +H+N+V + G C++ G ++I E+ + +L +L F Y
Sbjct: 120 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 179
Query: 553 -FLGWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGS 595
FL + + AKG+ +L H D + KI DFGLA+ +
Sbjct: 180 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 239
Query: 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ + R +MAPE + T + DV+S+GV++ E+
Sbjct: 240 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 280
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 26/197 (13%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGE-EVFWAEVSTIGKIYHMNLVRMW 523
EELG G G V++ A G A K + H+ + E E+ T+ + H LV +
Sbjct: 161 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLH 220
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYF-LGWKERFKVALGTAKGLAYLHHDEF---- 578
+ ++IYE++ L + + + + E + KGL ++H + +
Sbjct: 221 DAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLD 280
Query: 579 --------------EPKIADFGL-AKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK 623
E K+ DFGL A L + S GT + APE A P+
Sbjct: 281 LKPENIMFTTKRSNELKLIDFGLTAHLDPKQS----VKVTTGTAEFAAPEVAEGKPVGYY 336
Query: 624 VDVYSYGVVILEMVKGI 640
D++S GV+ ++ G+
Sbjct: 337 TDMWSVGVLSYILLSGL 353
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 46/213 (21%)
Query: 470 LGRGGSGAVY--KGVLAD-GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFC 526
LGRGG G V+ K + D A+ RL + E EV + K+ H +VR +
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 527 SEGR--HRLL-----IYEYVEKQSLDKHLFSSYFLGW-----KER---FKVALGTAKGLA 571
E +L +Y Y++ Q K + G +ER + L A+ +
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVE 132
Query: 572 YLH-----HDEFEP-----------KIADFGLAK-----------LSQRGSNSSQFSQIR 604
+LH H + +P K+ DFGL L+ + + Q+
Sbjct: 133 FLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQV- 191
Query: 605 GTKGYMAPEWASNLPITAKVDVYSYGVVILEMV 637
GTK YM+PE + KVD++S G+++ E++
Sbjct: 192 GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 42/221 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKG------VLADGRAVAVKRL--GDLHQGEEVFWAEVS 509
E + + LGRG G V + A R VAVK L G H +E+
Sbjct: 14 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 73
Query: 510 TIGKI-YHMNLVRMWGFCSE-GRHRLLIYEYVEKQSLDKHL------FSSY--------- 552
+ I +H+N+V + G C++ G ++I E+ + +L +L F Y
Sbjct: 74 ILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 553 -FLGWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGS 595
FL + + AKG+ +L H D + KI DFGLA+ +
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 193
Query: 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ + R +MAPE + T + DV+S+GV++ E+
Sbjct: 194 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 94/219 (42%), Gaps = 46/219 (21%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD---GRA---VAVKRLGDLHQGEE--VFWAEVS 509
E+ + + ELG+G G VY+G D G A VAVK + + E F E S
Sbjct: 14 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 73
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLG----------WKER 559
+ ++VR+ G S+G+ L++ E + L +L S +E
Sbjct: 74 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 133
Query: 560 FKVALGTAKGLAYLH-----------------HDEFEPKIADFGLAKLSQRGSNSSQFSQ 602
++A A G+AYL+ HD F KI DFG+ R + + +
Sbjct: 134 IQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHD-FTVKIGDFGMT----RDIYETDYYR 188
Query: 603 IRGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEM 636
+G KG +MAPE + T D++S+GVV+ E+
Sbjct: 189 -KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 94/219 (42%), Gaps = 46/219 (21%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD---GRA---VAVKRLGDLHQGEE--VFWAEVS 509
E+ + + ELG+G G VY+G D G A VAVK + + E F E S
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLG----------WKER 559
+ ++VR+ G S+G+ L++ E + L +L S +E
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 560 FKVALGTAKGLAYLH-----------------HDEFEPKIADFGLAKLSQRGSNSSQFSQ 602
++A A G+AYL+ HD F KI DFG+ R + + +
Sbjct: 133 IQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHD-FTVKIGDFGMT----RDIYETDYYR 187
Query: 603 IRGTKG-----YMAPEWASNLPITAKVDVYSYGVVILEM 636
+G KG +MAPE + T D++S+GVV+ E+
Sbjct: 188 -KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 42/221 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKG------VLADGRAVAVKRL--GDLHQGEEVFWAEVS 509
E + + LGRG G V + A R VAVK L G H +E+
Sbjct: 14 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 73
Query: 510 TIGKI-YHMNLVRMWGFCSE-GRHRLLIYEYVEKQSLDKHL------FSSY--------- 552
+ I +H+N+V + G C++ G ++I E+ + +L +L F Y
Sbjct: 74 ILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 553 -FLGWKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRGS 595
FL + + AKG+ +L H D + KI DFGLA+ +
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 193
Query: 596 NSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ + R +MAPE + T + DV+S+GV++ E+
Sbjct: 194 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 26/195 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGE-EVFWAEVSTIGKIYHMNLVRMWGF 525
EELG G G V++ A G A K + H+ + E E+ T+ + H LV +
Sbjct: 57 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 116
Query: 526 CSEGRHRLLIYEYVEKQSLDKHLFSSYF-LGWKERFKVALGTAKGLAYLHHDEF------ 578
+ ++IYE++ L + + + + E + KGL ++H + +
Sbjct: 117 FEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLK 176
Query: 579 ------------EPKIADFGL-AKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVD 625
E K+ DFGL A L + S GT + APE A P+ D
Sbjct: 177 PENIMFTTKRSNELKLIDFGLTAHLDPKQS----VKVTTGTAEFAAPEVAEGKPVGYYTD 232
Query: 626 VYSYGVVILEMVKGI 640
++S GV+ ++ G+
Sbjct: 233 MWSVGVLSYILLSGL 247
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 80/200 (40%), Gaps = 31/200 (15%)
Query: 468 EELGRGGSGAVYK------GVLADGRAVAVKRLGDLHQG--EEVFWAEVSTIGKIYHMNL 519
EELG G V K G+ + + +R +G E EVS + +I H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH----- 574
+ + +LI E V L L L +E + G+ YLH
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 575 HDEFEP---------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
H + +P KI DFGLA G+ +F I GT ++APE + P
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPAFVAPEIVNYEP 193
Query: 620 ITAKVDVYSYGVVILEMVKG 639
+ + D++S GV+ ++ G
Sbjct: 194 LGLEADMWSIGVITYILLSG 213
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 41/204 (20%)
Query: 469 ELGRGGSGAVYKG--VLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY---------HM 517
E+G G G V+K + GR VA+KR+ + GEE +STI ++ H
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVR-VQTGEE--GMPLSTIREVAVLRHLETFEHP 74
Query: 518 NLVRMWGFCSEGR-----HRLLIYEYVEKQSLDKHLFSSYFLGWK-ERFK-VALGTAKGL 570
N+VR++ C+ R L++E+V+ Q L +L G E K + +GL
Sbjct: 75 NVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 571 AYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEW 614
+LH H + +P K+ADFGLA++ S + + T Y APE
Sbjct: 134 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLWYRAPEV 190
Query: 615 ASNLPITAKVDVYSYGVVILEMVK 638
VD++S G + EM +
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFR 214
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 79/213 (37%), Gaps = 34/213 (15%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDL--HQGEEVFWAEVS 509
E+ + + LG G G VY+G ++ VAVK L ++ Q E F E
Sbjct: 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 126
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY-------FLGWKERFKV 562
I K H N+VR G + R ++ E + L L + L + V
Sbjct: 127 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 186
Query: 563 ALGTAKGLAYLHHDEF-------------------EPKIADFGLAKLSQRGSNSSQFSQI 603
A A G YL + F KI DFG+A+ R +
Sbjct: 187 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCA 246
Query: 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+M PE T+K D +S+GV++ E+
Sbjct: 247 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 279
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 85/201 (42%), Gaps = 28/201 (13%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ +F +ELG G G V G VA+K + + E+ F E + + H
Sbjct: 20 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE 79
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKV------------ALG 565
LV+++G C++ R +I EY+ L +Y + RF+ A+
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCL-----LNYLREMRHRFQTQQLLEMCKDVCEAME 134
Query: 566 TAKGLAYLH----------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA 615
+ +LH +D+ K++DFGL++ +S + + PE
Sbjct: 135 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVR-WSPPEVL 193
Query: 616 SNLPITAKVDVYSYGVVILEM 636
++K D++++GV++ E+
Sbjct: 194 MYSKFSSKSDIWAFGVLMWEI 214
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 79/213 (37%), Gaps = 34/213 (15%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLA------DGRAVAVKRLGDL--HQGEEVFWAEVS 509
E+ + + LG G G VY+G ++ VAVK L ++ Q E F E
Sbjct: 44 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 103
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY-------FLGWKERFKV 562
I K H N+VR G + R ++ E + L L + L + V
Sbjct: 104 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 163
Query: 563 ALGTAKGLAYLHHDEF-------------------EPKIADFGLAKLSQRGSNSSQFSQI 603
A A G YL + F KI DFG+A+ R +
Sbjct: 164 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCA 223
Query: 604 RGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+M PE T+K D +S+GV++ E+
Sbjct: 224 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 256
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 41/204 (20%)
Query: 469 ELGRGGSGAVYKG--VLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY---------HM 517
E+G G G V+K + GR VA+KR+ + GEE +STI ++ H
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVR-VQTGEE--GMPLSTIREVAVLRHLETFEHP 74
Query: 518 NLVRMWGFCSEGR-----HRLLIYEYVEKQSLDKHLFSSYFLGWK-ERFK-VALGTAKGL 570
N+VR++ C+ R L++E+V+ Q L +L G E K + +GL
Sbjct: 75 NVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 571 AYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEW 614
+LH H + +P K+ADFGLA++ S + + T Y APE
Sbjct: 134 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLWYRAPEV 190
Query: 615 ASNLPITAKVDVYSYGVVILEMVK 638
VD++S G + EM +
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFR 214
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 87/195 (44%), Gaps = 16/195 (8%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ +F +ELG G G V G VA+K + + E+ F E + + H
Sbjct: 20 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE 79
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHD 576
LV+++G C++ R +I EY+ L +L + ++ ++ + + YL
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 139
Query: 577 EFEPK--------IADFGLAKLSQRGSN----SSQFSQIRGTK---GYMAPEWASNLPIT 621
+F + + D G+ K+S G + +++ G+K + PE +
Sbjct: 140 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 622 AKVDVYSYGVVILEM 636
+K D++++GV++ E+
Sbjct: 200 SKSDIWAFGVLMWEI 214
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 36/203 (17%)
Query: 466 FKEELGRGGSGAVYKGVLADGRAVAVKRL-----GDLHQ-GEEVFWAEVSTIGKIYHMNL 519
FK +LG G G V+ L + R+ ++R+ D Q E AE+ + + H N+
Sbjct: 26 FKRKLGSGAFGDVH---LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNI 82
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLG--WKERFKVAL--GTAKGLAYLH- 574
++++ + + ++ E E L + + S+ G E + L LAY H
Sbjct: 83 IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS 142
Query: 575 ----HDEFEP--------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
H + +P KI DFGLA+L + +S+ + GT YMAPE
Sbjct: 143 QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAA---GTALYMAPEVFK 199
Query: 617 NLPITAKVDVYSYGVVILEMVKG 639
+T K D++S GVV+ ++ G
Sbjct: 200 R-DVTFKCDIWSAGVVMYFLLTG 221
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 85/202 (42%), Gaps = 39/202 (19%)
Query: 471 GRGGSGAVYKG-VLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEG 529
RG G V+K +L + AV + + D + + EV ++ + H N+++ G G
Sbjct: 33 ARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGAEKRG 90
Query: 530 R----HRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD--------- 576
LI + EK SL L + + W E +A A+GLAYLH D
Sbjct: 91 TSVDVDLWLITAFHEKGSLSDFL-KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHK 149
Query: 577 -----------------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEW---AS 616
IADFGLA + G ++ GT+ YMAPE A
Sbjct: 150 PAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAI 209
Query: 617 NLPITA--KVDVYSYGVVILEM 636
N A ++D+Y+ G+V+ E+
Sbjct: 210 NFQRDAFLRIDMYAMGLVLWEL 231
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 87/195 (44%), Gaps = 16/195 (8%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ +F +ELG G G V G VA+K + + E+ F E + + H
Sbjct: 4 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE 63
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHD 576
LV+++G C++ R +I EY+ L +L + ++ ++ + + YL
Sbjct: 64 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 123
Query: 577 EFEPK--------IADFGLAKLSQRGSN----SSQFSQIRGTK---GYMAPEWASNLPIT 621
+F + + D G+ K+S G + +++ G+K + PE +
Sbjct: 124 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 183
Query: 622 AKVDVYSYGVVILEM 636
+K D++++GV++ E+
Sbjct: 184 SKSDIWAFGVLMWEI 198
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 87/195 (44%), Gaps = 16/195 (8%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ +F +ELG G G V G VA+K + + E+ F E + + H
Sbjct: 5 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE 64
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHD 576
LV+++G C++ R +I EY+ L +L + ++ ++ + + YL
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 124
Query: 577 EFEPK--------IADFGLAKLSQRGSN----SSQFSQIRGTK---GYMAPEWASNLPIT 621
+F + + D G+ K+S G + +++ G+K + PE +
Sbjct: 125 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 184
Query: 622 AKVDVYSYGVVILEM 636
+K D++++GV++ E+
Sbjct: 185 SKSDIWAFGVLMWEI 199
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 41/204 (20%)
Query: 469 ELGRGGSGAVYKG--VLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY---------HM 517
E+G G G V+K + GR VA+KR+ + GEE +STI ++ H
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVR-VQTGEE--GMPLSTIREVAVLRHLETFEHP 74
Query: 518 NLVRMWGFCSEGR-----HRLLIYEYVEKQSLDKHLFSSYFLGWK-ERFK-VALGTAKGL 570
N+VR++ C+ R L++E+V+ Q L +L G E K + +GL
Sbjct: 75 NVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 571 AYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEW 614
+LH H + +P K+ADFGLA++ S + + T Y APE
Sbjct: 134 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLWYRAPEV 190
Query: 615 ASNLPITAKVDVYSYGVVILEMVK 638
VD++S G + EM +
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFR 214
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 80/196 (40%), Gaps = 30/196 (15%)
Query: 467 KEELGRGGSGAVY----KGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRM 522
+ ELGRG + VY KG +K+ D +++ E+ + ++ H N++++
Sbjct: 58 ESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD----KKIVRTEIGVLLRLSHPNIIKL 113
Query: 523 WGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDE 577
L+ E V L + + ++ + +AYLH H +
Sbjct: 114 KEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRD 173
Query: 578 FEP--------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK 623
+P KIADFGL+K+ + + + GT GY APE +
Sbjct: 174 LKPENLLYATPAPDAPLKIADFGLSKIVE---HQVLMKTVCGTPGYCAPEILRGCAYGPE 230
Query: 624 VDVYSYGVVILEMVKG 639
VD++S G++ ++ G
Sbjct: 231 VDMWSVGIITYILLCG 246
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 87/195 (44%), Gaps = 16/195 (8%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ +F +ELG G G V G VA+K + + E+ F E + + H
Sbjct: 11 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE 70
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLHHD 576
LV+++G C++ R +I EY+ L +L + ++ ++ + + YL
Sbjct: 71 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 130
Query: 577 EFEPK--------IADFGLAKLSQRGSN----SSQFSQIRGTK---GYMAPEWASNLPIT 621
+F + + D G+ K+S G + +++ G+K + PE +
Sbjct: 131 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 190
Query: 622 AKVDVYSYGVVILEM 636
+K D++++GV++ E+
Sbjct: 191 SKSDIWAFGVLMWEI 205
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 86/197 (43%), Gaps = 34/197 (17%)
Query: 465 SFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
+F +ELG G G V G VA+K + + E+ F E + + H LV+++G
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 66
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKV------------ALGTAKGLAY 572
C++ R +I EY+ L +Y + RF+ A+ + +
Sbjct: 67 VCTKQRPIFIITEYMANGCL-----LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF 121
Query: 573 LH----------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWASNLP 619
LH +D+ K++DFGL+ R +++ G+K + PE
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLS----RYVLDDEYTSSVGSKFPVRWSPPEVLMYSK 177
Query: 620 ITAKVDVYSYGVVILEM 636
++K D++++GV++ E+
Sbjct: 178 FSSKSDIWAFGVLMWEI 194
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 121/297 (40%), Gaps = 59/297 (19%)
Query: 456 YAELKKSTKSFKEELGRGGSGAVYKGVLAD--------GRAVAVKRLGDLHQG-EEVFWA 506
+ +++ F E LG+G ++KGV + V +K L H+ E F+
Sbjct: 2 FHKIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFE 61
Query: 507 EVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS---YFLGWKERFKVA 563
S + K+ H +LV +G C G +L+ E+V+ SLD +L + + WK +VA
Sbjct: 62 AASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWK--LEVA 119
Query: 564 LGTAKGLAYLHHD----------------EFEPKIADFGLAKLSQRGSNSSQFSQ--IRG 605
A + +L + E + K + KLS G + + + ++
Sbjct: 120 KQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQE 179
Query: 606 TKGYMAPEWASNLP-ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREV 664
++ PE N + D +S+G + E+ G G+ + L +
Sbjct: 180 RIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG----------GDKPLSAL-----DS 224
Query: 665 KRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
+RK+ + E+ + + +AA L + +C+D + RP+ ++++ L
Sbjct: 225 QRKLQFYED-----------RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDL 270
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 80/200 (40%), Gaps = 31/200 (15%)
Query: 468 EELGRGGSGAVYK------GVLADGRAVAVKRLGDLHQG--EEVFWAEVSTIGKIYHMNL 519
EELG G V K G+ + + +R +G E EVS + +I H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH----- 574
+ + +LI E V L L L +E + G+ YLH
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 575 HDEFEP---------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
H + +P KI DFGLA G+ +F I GT ++APE + P
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEP 193
Query: 620 ITAKVDVYSYGVVILEMVKG 639
+ + D++S GV+ ++ G
Sbjct: 194 LGLEADMWSIGVITYILLSG 213
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 34/200 (17%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
E+ + + +++LG G G V+ VAVK + E F AE + + + H
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 237
Query: 518 NLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALG----TAKGLA-- 571
LV++ ++ +I E++ K SL L S G K+ + A+G+A
Sbjct: 238 KLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFI 294
Query: 572 ----YLHHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASN 617
Y+H D KIADFGLA++ + I+ T APE +
Sbjct: 295 EQRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFP-------IKWT----APEAINF 343
Query: 618 LPITAKVDVYSYGVVILEMV 637
T K DV+S+G++++E+V
Sbjct: 344 GSFTIKSDVWSFGILLMEIV 363
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 80/200 (40%), Gaps = 31/200 (15%)
Query: 468 EELGRGGSGAVYK------GVLADGRAVAVKRLGDLHQG--EEVFWAEVSTIGKIYHMNL 519
EELG G V K G+ + + +R +G E EVS + +I H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH----- 574
+ + +LI E V L L L +E + G+ YLH
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 575 HDEFEP---------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
H + +P KI DFGLA G+ +F I GT ++APE + P
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEP 193
Query: 620 ITAKVDVYSYGVVILEMVKG 639
+ + D++S GV+ ++ G
Sbjct: 194 LGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 80/200 (40%), Gaps = 31/200 (15%)
Query: 468 EELGRGGSGAVYK------GVLADGRAVAVKRLGDLHQG--EEVFWAEVSTIGKIYHMNL 519
EELG G V K G+ + + +R +G E EVS + +I H N+
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH----- 574
+ + +LI E V L L L +E + G+ YLH
Sbjct: 76 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA 135
Query: 575 HDEFEP---------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
H + +P KI DFGLA G+ +F I GT ++APE + P
Sbjct: 136 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEP 192
Query: 620 ITAKVDVYSYGVVILEMVKG 639
+ + D++S GV+ ++ G
Sbjct: 193 LGLEADMWSIGVITYILLSG 212
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 80/200 (40%), Gaps = 31/200 (15%)
Query: 468 EELGRGGSGAVYK------GVLADGRAVAVKRLGDLHQG--EEVFWAEVSTIGKIYHMNL 519
EELG G V K G+ + + +R +G E EVS + +I H N+
Sbjct: 17 EELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH----- 574
+ + +LI E V L L L +E + G+ YLH
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 575 HDEFEP---------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
H + +P KI DFGLA G+ +F I GT ++APE + P
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEP 193
Query: 620 ITAKVDVYSYGVVILEMVKG 639
+ + D++S GV+ ++ G
Sbjct: 194 LGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 80/200 (40%), Gaps = 31/200 (15%)
Query: 468 EELGRGGSGAVYK------GVLADGRAVAVKRLGDLHQG--EEVFWAEVSTIGKIYHMNL 519
EELG G V K G+ + + +R +G E EVS + +I H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH----- 574
+ + +LI E V L L L +E + G+ YLH
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 575 HDEFEP---------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
H + +P KI DFGLA G+ +F I GT ++APE + P
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEP 193
Query: 620 ITAKVDVYSYGVVILEMVKG 639
+ + D++S GV+ ++ G
Sbjct: 194 LGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 80/200 (40%), Gaps = 31/200 (15%)
Query: 468 EELGRGGSGAVYK------GVLADGRAVAVKRLGDLHQG--EEVFWAEVSTIGKIYHMNL 519
EELG G V K G+ + + +R +G E EVS + +I H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH----- 574
+ + +LI E V L L L +E + G+ YLH
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 575 HDEFEP---------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
H + +P KI DFGLA G+ +F I GT ++APE + P
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEP 193
Query: 620 ITAKVDVYSYGVVILEMVKG 639
+ + D++S GV+ ++ G
Sbjct: 194 LGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 80/200 (40%), Gaps = 31/200 (15%)
Query: 468 EELGRGGSGAVYK------GVLADGRAVAVKRLGDLHQG--EEVFWAEVSTIGKIYHMNL 519
EELG G V K G+ + + +R +G E EVS + +I H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH----- 574
+ + +LI E V L L L +E + G+ YLH
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 575 HDEFEP---------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
H + +P KI DFGLA G+ +F I GT ++APE + P
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEP 193
Query: 620 ITAKVDVYSYGVVILEMVKG 639
+ + D++S GV+ ++ G
Sbjct: 194 LGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 80/200 (40%), Gaps = 31/200 (15%)
Query: 468 EELGRGGSGAVYK------GVLADGRAVAVKRLGDLHQG--EEVFWAEVSTIGKIYHMNL 519
EELG G V K G+ + + +R +G E EVS + +I H N+
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH----- 574
+ + +LI E V L L L +E + G+ YLH
Sbjct: 76 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA 135
Query: 575 HDEFEP---------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
H + +P KI DFGLA G+ +F I GT ++APE + P
Sbjct: 136 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEP 192
Query: 620 ITAKVDVYSYGVVILEMVKG 639
+ + D++S GV+ ++ G
Sbjct: 193 LGLEADMWSIGVITYILLSG 212
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 80/200 (40%), Gaps = 31/200 (15%)
Query: 468 EELGRGGSGAVYK------GVLADGRAVAVKRLGDLHQG--EEVFWAEVSTIGKIYHMNL 519
EELG G V K G+ + + +R +G E EVS + +I H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH----- 574
+ + +LI E V L L L +E + G+ YLH
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 575 HDEFEP---------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
H + +P KI DFGLA G+ +F I GT ++APE + P
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEP 193
Query: 620 ITAKVDVYSYGVVILEMVKG 639
+ + D++S GV+ ++ G
Sbjct: 194 LGLEADMWSIGVITYILLSG 213
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 86/216 (39%), Gaps = 39/216 (18%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGV---LADGRAV---AVKRLGDLHQGEE--VFWAEVS 509
E ++ F + LG G G V + L AV AVK L +E +E+
Sbjct: 34 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 93
Query: 510 TIGKI-YHMNLVRMWGFCSEGRHRLLIYEYV------------EKQSLDKHLFSSYFLGW 556
+ + H N+V + G C+ G L+I EY + LDK L
Sbjct: 94 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKE--DGRPLEL 151
Query: 557 KERFKVALGTAKGLAYL------HHDEFE----------PKIADFGLAKLSQRGSNSSQF 600
++ + A+G+A+L H D KI DFGLA+ SN
Sbjct: 152 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 211
Query: 601 SQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
R +MAPE + T + DV+SYG+++ E+
Sbjct: 212 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 247
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 80/200 (40%), Gaps = 31/200 (15%)
Query: 468 EELGRGGSGAVYK------GVLADGRAVAVKRLGDLHQG--EEVFWAEVSTIGKIYHMNL 519
EELG G V K G+ + + +R +G E EVS + +I H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH----- 574
+ + +LI E V L L L +E + G+ YLH
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 575 HDEFEP---------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
H + +P KI DFGLA G+ +F I GT ++APE + P
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEP 193
Query: 620 ITAKVDVYSYGVVILEMVKG 639
+ + D++S GV+ ++ G
Sbjct: 194 LGLEADMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 80/200 (40%), Gaps = 31/200 (15%)
Query: 468 EELGRGGSGAVYK------GVLADGRAVAVKRLGDLHQG--EEVFWAEVSTIGKIYHMNL 519
EELG G V K G+ + + +R +G E EVS + +I H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH----- 574
+ + +LI E V L L L +E + G+ YLH
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 575 HDEFEP---------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
H + +P KI DFGLA G+ +F I GT ++APE + P
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEP 193
Query: 620 ITAKVDVYSYGVVILEMVKG 639
+ + D++S GV+ ++ G
Sbjct: 194 LGLEADMWSIGVITYILLSG 213
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 89/203 (43%), Gaps = 50/203 (24%)
Query: 467 KEELGRGGSGA-VYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMWG 524
K+ LG G G VY+G+ D R VAVKR+ L + EV + + H N++R
Sbjct: 29 KDVLGHGAEGTIVYRGMF-DNRDVAVKRI--LPECFSFADREVQLLRESDEHPNVIRY-- 83
Query: 525 FCSEGRHRL----------LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH 574
FC+E + + EYVE++ LG E + T GLA+LH
Sbjct: 84 FCTEKDRQFQYIAIELCAATLQEYVEQKDFAH-------LGL-EPITLLQQTTSGLAHLH 135
Query: 575 -----HDEFEPK----------------IADFGLAKLSQRGSNS-SQFSQIRGTKGYMAP 612
H + +P I+DFGL K G +S S+ S + GT+G++AP
Sbjct: 136 SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAP 195
Query: 613 EWAS---NLPITAKVDVYSYGVV 632
E S T VD++S G V
Sbjct: 196 EMLSEDCKENPTYTVDIFSAGCV 218
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 84/214 (39%), Gaps = 35/214 (16%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGV---LADGRAV---AVKRLGDLHQGEE--VFWAEVS 509
E ++ F + LG G G V + L AV AVK L +E +E+
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 510 TIGKI-YHMNLVRMWGFCSEGRHRLLIYEYV----------EKQSLDKHLFSSYFLGWKE 558
+ + H N+V + G C+ G L+I EY K D L ++
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRD 161
Query: 559 RFKVALGTAKGLAYL------HHDEFE----------PKIADFGLAKLSQRGSNSSQFSQ 602
+ A+G+A+L H D KI DFGLA+ SN
Sbjct: 162 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 221
Query: 603 IRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
R +MAPE + T + DV+SYG+++ E+
Sbjct: 222 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 255
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 80/200 (40%), Gaps = 31/200 (15%)
Query: 468 EELGRGGSGAVYK------GVLADGRAVAVKRLGDLHQG--EEVFWAEVSTIGKIYHMNL 519
EELG G V K G+ + + +R +G E EVS + +I H N+
Sbjct: 17 EELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH----- 574
+ + +LI E V L L L +E + G+ YLH
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 575 HDEFEP---------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
H + +P KI DFGLA G+ +F I GT ++APE + P
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEP 193
Query: 620 ITAKVDVYSYGVVILEMVKG 639
+ + D++S GV+ ++ G
Sbjct: 194 LGLEADMWSIGVITYILLSG 213
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 91/221 (41%), Gaps = 39/221 (17%)
Query: 465 SFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
+ E +G+G G V++G G VAVK + E+ + H N++
Sbjct: 40 TLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIA 98
Query: 525 FCSEGRHR----LLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH------ 574
RH LI Y E SL +L + L ++ L A GLA+LH
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-LDTVSCLRIVLSIASGLAHLHIEIFGT 157
Query: 575 -------HDEFEPK-----------IADFGLAKLSQRGSNSSQF--SQIRGTKGYMAPEW 614
H + + K IAD GLA + + +N + GTK YMAPE
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 217
Query: 615 ASN------LPITAKVDVYSYGVVILEMVKGIRLSNWVVED 649
+VD++++G+V+ E+ + + +SN +VED
Sbjct: 218 LDETIQVDCFDSYKRVDIWAFGLVLWEVARRM-VSNGIVED 257
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 89/223 (39%), Gaps = 48/223 (21%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVL---ADG---RAVAVKRLGDLHQG--EEVFWAEVS 509
E+ S F EELG G VYKG L A G +AVA+K L D +G E F E
Sbjct: 5 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM 64
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS----------------SYF 553
++ H N+V + G ++ + +I+ Y L + L
Sbjct: 65 LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA 124
Query: 554 LGWKERFKVALGTAKGLAYL--HH--------------DEFEPKIADFGLAKLSQRGSNS 597
L + + A G+ YL HH D+ KI+D GL R +
Sbjct: 125 LEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLF----REVYA 180
Query: 598 SQFSQIRGTK----GYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ + ++ G +MAPE + D++SYGVV+ E+
Sbjct: 181 ADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEV 223
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 31/206 (15%)
Query: 462 STKSFK--EELGRGGSGAVYKGV-LADGRAVAVKRLG-DLHQG-EEVFWAEVSTIGKIYH 516
S+ FK E+LG G VYKG+ G VA+K + D +G E+S + ++ H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVAL------GTAKGL 570
N+VR++ L++E+++ L K++ S ++ L +GL
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 571 AYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE- 613
A+ H H + +P K+ DFGLA+ G + FS T Y AP+
Sbjct: 122 AFCHENKILHRDLKPQNLLINKRGQLKLGDFGLAR--AFGIPVNTFSSEVVTLWYRAPDV 179
Query: 614 WASNLPITAKVDVYSYGVVILEMVKG 639
+ + +D++S G ++ EM+ G
Sbjct: 180 LMGSRTYSTSIDIWSCGCILAEMITG 205
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 83/195 (42%), Gaps = 28/195 (14%)
Query: 469 ELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEV--FWAEVSTIGKIYHMNLVRMW-GF 525
ELG G G VYK + +A ++ D EE+ + E+ + H N+V++ F
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 526 CSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALG-TAKGLAYLHHDEF------ 578
E +LI E+ ++D + + + +V T L YLH ++
Sbjct: 104 YYENNLWILI-EFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 162
Query: 579 ----------EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-----WASNLPITAK 623
+ K+ADFG++ + R + GT +MAPE + + P K
Sbjct: 163 AGNILFTLDGDIKLADFGVSAKNTR--TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYK 220
Query: 624 VDVYSYGVVILEMVK 638
DV+S G+ ++EM +
Sbjct: 221 ADVWSLGITLIEMAE 235
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 91/221 (41%), Gaps = 39/221 (17%)
Query: 465 SFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
+ E +G+G G V++G G VAVK + E+ + H N++
Sbjct: 11 TLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIA 69
Query: 525 FCSEGRHR----LLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH------ 574
RH LI Y E SL +L + L ++ L A GLA+LH
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-LDTVSCLRIVLSIASGLAHLHIEIFGT 128
Query: 575 -------HDEFEPK-----------IADFGLAKLSQRGSNSSQF--SQIRGTKGYMAPEW 614
H + + K IAD GLA + + +N + GTK YMAPE
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 615 ASN------LPITAKVDVYSYGVVILEMVKGIRLSNWVVED 649
+VD++++G+V+ E+ + + +SN +VED
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEVARRM-VSNGIVED 228
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 79/203 (38%), Gaps = 37/203 (18%)
Query: 468 EELGRG-----------GSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
EELG G G+G Y R ++ R G E EV+ + +I H
Sbjct: 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRG---VSREEIEREVNILREIRH 67
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-- 574
N++ + +LI E V L L L E + G+ YLH
Sbjct: 68 PNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK 127
Query: 575 ---HDEFEP---------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
H + +P K+ DFG+A + G+ +F I GT ++APE +
Sbjct: 128 RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN---EFKNIFGTPEFVAPEIVN 184
Query: 617 NLPITAKVDVYSYGVVILEMVKG 639
P+ + D++S GV+ ++ G
Sbjct: 185 YEPLGLEADMWSIGVITYILLSG 207
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 28/194 (14%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVF---WAEVSTIGKIYHMNLVRMWG 524
E +G+G G V+KG+ + V ++ DL + E+ E++ + + + + +G
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVAL---GTAKGLAYLHHD----- 576
+G +I EY+ S L + F + F++A KGL YLH +
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLLRAGPF----DEFQIATMLKEILKGLDYLHSEKKIHR 144
Query: 577 -----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVD 625
+ + K+ADFG+A Q + + GT +MAPE +K D
Sbjct: 145 DIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKAD 202
Query: 626 VYSYGVVILEMVKG 639
++S G+ +E+ KG
Sbjct: 203 IWSLGITAIELAKG 216
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 118/284 (41%), Gaps = 55/284 (19%)
Query: 471 GRGGSGAVYKG-VLADGRAVAVKRLGDLH--QGE-EVFWAEVSTIGKIYHMNLVRMWGFC 526
RG G V+K ++ D AV + L D Q E E+F ST G + H NL++
Sbjct: 24 ARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIF----STPG-MKHENLLQFIAAE 78
Query: 527 SEGRHR----LLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-------- 574
G + LI + +K SL +L + W E VA ++GL+YLH
Sbjct: 79 KRGSNLEVELWLITAFHDKGSLTDYL-KGNIITWNELCHVAETMSRGLSYLHEDVPWCRG 137
Query: 575 --------HDEFEPK-----------IADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEW- 614
H +F+ K +ADFGLA + G GT+ YMAPE
Sbjct: 138 EGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVL 197
Query: 615 --ASNLPITA--KVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILY 670
A N A ++D+Y+ G+V+ E+V + + DG E L F E+ +
Sbjct: 198 EGAINFQRDAFLRIDMYAMGLVLWELVSRCKAA-----DGPVDEYMLP-FEEEIGQHPSL 251
Query: 671 EE--EAWIEEIVDPRLKGKFNTNQAATLIGIGI-SCVDEDRSKR 711
EE E + + + P +K + + + + I C D D R
Sbjct: 252 EELQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAEAR 295
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 26/191 (13%)
Query: 468 EELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGE--EVFWAEVSTIGKIYHMNLVRMWG 524
E++GRG G V+ G L AD VAVK + + F E + + H N+VR+ G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVAL----GTAKGLAYLH-----H 575
C++ + ++ E V+ L + G + R K L A G+ YL H
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTE---GARLRVKTLLQMVGDAAAGMEYLESKCCIH 236
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ KI+DFG+++ G ++ + + APE + +++
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSES 296
Query: 625 DVYSYGVVILE 635
DV+S+G+++ E
Sbjct: 297 DVWSFGILLWE 307
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 120/301 (39%), Gaps = 67/301 (22%)
Query: 456 YAELKKSTKSFKEELGRGGSGAVYKGVLAD--------GRAVAVKRLGDLHQG-EEVFWA 506
+ +++ F E LG+G ++KGV + V +K L H+ E F+
Sbjct: 2 FHKIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFE 61
Query: 507 EVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS---YFLGWKERFKVA 563
S + K+ H +LV +G C G +L+ E+V+ SLD +L + + WK
Sbjct: 62 AASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWK------ 115
Query: 564 LGTAKGLAYLHH--------------------DEFEPKIADFGLAKLSQRGSNSSQFSQ- 602
L AK LA+ H E + K + KLS G + + +
Sbjct: 116 LEVAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD 175
Query: 603 -IRGTKGYMAPEWASNLP-ITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRF 660
++ ++ PE N + D +S+G + E+ G G+ + L
Sbjct: 176 ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG----------GDKPLSAL--- 222
Query: 661 VREVKRKILYEEEAWIEEIVDPRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQS 720
+ +RK+ + E+ + + +AA L + +C+D + RP+ ++++
Sbjct: 223 --DSQRKLQFYED-----------RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRD 269
Query: 721 L 721
L
Sbjct: 270 L 270
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 86/218 (39%), Gaps = 39/218 (17%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKG-VLADGR-----AVAVKRLGDLHQGEE--VFWAEVS 509
E ++ F + LG G G V + G+ VAVK L +E +E+
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 510 TIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL-FSSYFLGWKERFKVALGT- 566
+ + H N+V + G C+ G L+I EY L L S L F +A T
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTL 161
Query: 567 ------------AKGLAYL------HHDEFE----------PKIADFGLAKLSQRGSNSS 598
A+G+A+L H D KI DFGLA+ SN
Sbjct: 162 STRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 221
Query: 599 QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
R +MAPE + T + DV+SYG+++ E+
Sbjct: 222 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 259
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 86/218 (39%), Gaps = 39/218 (17%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKG-VLADGR-----AVAVKRLGDLHQGEE--VFWAEVS 509
E ++ F + LG G G V + G+ VAVK L +E +E+
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 510 TIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL-FSSYFLGWKERFKVALGT- 566
+ + H N+V + G C+ G L+I EY L L S L F +A T
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTA 161
Query: 567 ------------AKGLAYL------HHDEFE----------PKIADFGLAKLSQRGSNSS 598
A+G+A+L H D KI DFGLA+ SN
Sbjct: 162 STRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 221
Query: 599 QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
R +MAPE + T + DV+SYG+++ E+
Sbjct: 222 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 259
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 82/195 (42%), Gaps = 28/195 (14%)
Query: 469 ELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEV--FWAEVSTIGKIYHMNLVRMW-GF 525
ELG G G VYK + +A ++ D EE+ + E+ + H N+V++ F
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 526 CSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALG-TAKGLAYLHHDEF------ 578
E +LI E+ ++D + + + +V T L YLH ++
Sbjct: 104 YYENNLWILI-EFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 162
Query: 579 ----------EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-----WASNLPITAK 623
+ K+ADFG++ + R GT +MAPE + + P K
Sbjct: 163 AGNILFTLDGDIKLADFGVSAKNTRXIQRR--DSFIGTPYWMAPEVVMCETSKDRPYDYK 220
Query: 624 VDVYSYGVVILEMVK 638
DV+S G+ ++EM +
Sbjct: 221 ADVWSLGITLIEMAE 235
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 91/221 (41%), Gaps = 39/221 (17%)
Query: 465 SFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
+ E +G+G G V++G G VAVK + E+ + H N++
Sbjct: 11 TLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIA 69
Query: 525 FCSEGRHR----LLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH------ 574
RH LI Y E SL +L + L ++ L A GLA+LH
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-LDTVSCLRIVLSIASGLAHLHIEIFGT 128
Query: 575 -------HDEFEPK-----------IADFGLAKLSQRGSNSSQF--SQIRGTKGYMAPEW 614
H + + K IAD GLA + + +N + GTK YMAPE
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 615 ASN------LPITAKVDVYSYGVVILEMVKGIRLSNWVVED 649
+VD++++G+V+ E+ + + +SN +VED
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEVARRM-VSNGIVED 228
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 80/200 (40%), Gaps = 31/200 (15%)
Query: 468 EELGRGGSGAVYK------GVLADGRAVAVKRLGDLHQG--EEVFWAEVSTIGKIYHMNL 519
EELG G V K G+ + + +R +G E EVS + +I H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH----- 574
+ + +LI E V L L L +E + G+ YLH
Sbjct: 77 ITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 575 HDEFEP---------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
H + +P KI DFGLA G+ +F I GT ++APE + P
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEP 193
Query: 620 ITAKVDVYSYGVVILEMVKG 639
+ + D++S GV+ ++ G
Sbjct: 194 LGLEADMWSIGVITYILLSG 213
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 82/195 (42%), Gaps = 28/195 (14%)
Query: 469 ELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEV--FWAEVSTIGKIYHMNLVRMW-GF 525
ELG G G VYK + +A ++ D EE+ + E+ + H N+V++ F
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 526 CSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALG-TAKGLAYLHHDEF------ 578
E +LI E+ ++D + + + +V T L YLH ++
Sbjct: 104 YYENNLWILI-EFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 162
Query: 579 ----------EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-----WASNLPITAK 623
+ K+ADFG++ + R GT +MAPE + + P K
Sbjct: 163 AGNILFTLDGDIKLADFGVSAKNTRXIQRR--DXFIGTPYWMAPEVVMCETSKDRPYDYK 220
Query: 624 VDVYSYGVVILEMVK 638
DV+S G+ ++EM +
Sbjct: 221 ADVWSLGITLIEMAE 235
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 46/213 (21%)
Query: 470 LGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSE 528
LG+G G V K A D R A+K++ + +EV + + H +VR + E
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 529 GRH-------------RLLIYEYVEKQSLDKHLFSSYFLGWKERF-KVALGTAKGLAYLH 574
R+ + EY E ++L + S ++ + ++ + L+Y+H
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH 133
Query: 575 -----HDEFEP-----------KIADFGLAKLSQR-------------GSNSSQFSQIRG 605
H + +P KI DFGLAK R GS+ + S I G
Sbjct: 134 SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI-G 192
Query: 606 TKGYMAPEWASNL-PITAKVDVYSYGVVILEMV 637
T Y+A E K+D+YS G++ EM+
Sbjct: 193 TAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 77/191 (40%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E EV + H N++R++G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY + + K L + A L+Y H H + +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 140
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + SS+ + GT Y+ PE KVD++S
Sbjct: 141 PENLLLGSAGELKIADFGWSV----HAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWS 196
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 197 LGVLCYEFLVG 207
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 97/222 (43%), Gaps = 32/222 (14%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
ELK ELG G G V+K V ++L L + + + ++
Sbjct: 2 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 61
Query: 518 N---LVRMWG-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL 573
N +V +G F S+G + + E+++ SLD+ L + + + KV++ KGL YL
Sbjct: 62 NSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 574 H------HDEFEP-----------KIADFGLA-KLSQRGSNSSQFSQIRGTKGYMAPEWA 615
H + +P K+ DFG++ +L +NS GT+ YM+PE
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSYMSPERL 175
Query: 616 SNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAEL 657
+ + D++S G+ ++EM G + + + +E EL
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVG----RYPIPPPDAKELEL 213
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 78/191 (40%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E EV + H N++R++G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY + + K L + A L+Y H H + +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 140
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + SS+ + + GT Y+ PE KVD++S
Sbjct: 141 PENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 196
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 197 LGVLCYEFLVG 207
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 22/173 (12%)
Query: 486 GRAVAVKRL-GDLHQGEEVFW-AEVSTIGKIYHMNLVRMWGFCS-EGRHRL-LIYEYVEK 541
G VAVK L D W E+ + +YH ++++ G C +G L L+ EYV
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEFEP----------------KIADF 585
SL +L + +G + A +G+AYLH + KI DF
Sbjct: 103 GSLRDYL-PRHSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDF 161
Query: 586 GLAKLSQRGSNSSQFSQIRGTKGY-MAPEWASNLPITAKVDVYSYGVVILEMV 637
GLAK G + + + + APE DV+S+GV + E++
Sbjct: 162 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 28/193 (14%)
Query: 468 EELGRGGSGAVYKG-------VLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLV 520
+ELG G G V KG V + D +E+ AE + + ++ + +V
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL-AEANVMQQLDNPYIV 75
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF-- 578
RM G C E +L+ E E L+K+L + + K ++ + G+ YL F
Sbjct: 76 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 134
Query: 579 --------------EPKIADFGLAKLSQRGSNSSQFSQIRGT--KGYMAPEWASNLPITA 622
KI+DFGL+K + R + +Q G + APE + ++
Sbjct: 135 RDLAARNVLLVTQHYAKISDFGLSK-ALRADENXYKAQTHGKWPVKWYAPECINYYKFSS 193
Query: 623 KVDVYSYGVVILE 635
K DV+S+GV++ E
Sbjct: 194 KSDVWSFGVLMWE 206
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 97/222 (43%), Gaps = 32/222 (14%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
ELK ELG G G V+K V ++L L + + + ++
Sbjct: 2 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 61
Query: 518 N---LVRMWG-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL 573
N +V +G F S+G + + E+++ SLD+ L + + + KV++ KGL YL
Sbjct: 62 NSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 574 H------HDEFEP-----------KIADFGLA-KLSQRGSNSSQFSQIRGTKGYMAPEWA 615
H + +P K+ DFG++ +L +NS GT+ YM+PE
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSYMSPERL 175
Query: 616 SNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAEL 657
+ + D++S G+ ++EM G + + + +E EL
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVG----RYPIPPPDAKELEL 213
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 97/222 (43%), Gaps = 32/222 (14%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
ELK ELG G G V+K V ++L L + + + ++
Sbjct: 2 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 61
Query: 518 N---LVRMWG-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL 573
N +V +G F S+G + + E+++ SLD+ L + + + KV++ KGL YL
Sbjct: 62 NSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 574 H------HDEFEP-----------KIADFGLA-KLSQRGSNSSQFSQIRGTKGYMAPEWA 615
H + +P K+ DFG++ +L +NS GT+ YM+PE
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSYMSPERL 175
Query: 616 SNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAEL 657
+ + D++S G+ ++EM G + + + +E EL
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVG----RYPIPPPDAKELEL 213
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 97/222 (43%), Gaps = 32/222 (14%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
ELK ELG G G V+K V ++L L + + + ++
Sbjct: 2 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 61
Query: 518 N---LVRMWG-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL 573
N +V +G F S+G + + E+++ SLD+ L + + + KV++ KGL YL
Sbjct: 62 NSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 574 H------HDEFEP-----------KIADFGLA-KLSQRGSNSSQFSQIRGTKGYMAPEWA 615
H + +P K+ DFG++ +L +NS GT+ YM+PE
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSYMSPERL 175
Query: 616 SNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAEL 657
+ + D++S G+ ++EM G + + + +E EL
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVG----RYPIPPPDAKELEL 213
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 82/197 (41%), Gaps = 27/197 (13%)
Query: 469 ELGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQG---EEVFWAEVSTIGKIYHMNLVRMWG 524
++G G G V+K D G+ VA+K+ + +++ E+ + ++ H NLV +
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HDE 577
R L++EY + L H Y G E + T + + + H H +
Sbjct: 70 VFRRKRRLHLVFEYCDHTVL--HELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRD 127
Query: 578 FEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-WASNLPITAKVD 625
+P K+ DFG A+L S + T+ Y +PE + VD
Sbjct: 128 VKPENILITKHSVIKLCDFGFARLL--TGPSDYYDDEVATRWYRSPELLVGDTQYGPPVD 185
Query: 626 VYSYGVVILEMVKGIRL 642
V++ G V E++ G+ L
Sbjct: 186 VWAIGCVFAELLSGVPL 202
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 22/173 (12%)
Query: 486 GRAVAVKRL-GDLHQGEEVFW-AEVSTIGKIYHMNLVRMWGFCS-EGRHRL-LIYEYVEK 541
G VAVK L D W E+ + +YH ++++ G C +G L L+ EYV
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEFEP----------------KIADF 585
SL +L + +G + A +G+AYLH + KI DF
Sbjct: 103 GSLRDYL-PRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDF 161
Query: 586 GLAKLSQRGSNSSQFSQIRGTKGY-MAPEWASNLPITAKVDVYSYGVVILEMV 637
GLAK G + + + + APE DV+S+GV + E++
Sbjct: 162 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 97/222 (43%), Gaps = 32/222 (14%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
ELK ELG G G V+K V ++L L + + + ++
Sbjct: 64 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 123
Query: 518 N---LVRMWG-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL 573
N +V +G F S+G + + E+++ SLD+ L + + + KV++ KGL YL
Sbjct: 124 NSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 182
Query: 574 H------HDEFEP-----------KIADFGLA-KLSQRGSNSSQFSQIRGTKGYMAPEWA 615
H + +P K+ DFG++ +L +NS GT+ YM+PE
Sbjct: 183 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSYMSPERL 237
Query: 616 SNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAEL 657
+ + D++S G+ ++EM G + + + +E EL
Sbjct: 238 QGTHYSVQSDIWSMGLSLVEMAVG----RYPIPPPDAKELEL 275
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 26/191 (13%)
Query: 468 EELGRGGSGAVYKGVL-ADGRAVAVKRLGDLHQGE--EVFWAEVSTIGKIYHMNLVRMWG 524
E++GRG G V+ G L AD VAVK + + F E + + H N+VR+ G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVAL----GTAKGLAYLH-----H 575
C++ + ++ E V+ L + G + R K L A G+ YL H
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTE---GARLRVKTLLQMVGDAAAGMEYLESKCCIH 236
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ KI+DFG+++ G ++ + + APE + +++
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSES 296
Query: 625 DVYSYGVVILE 635
DV+S+G+++ E
Sbjct: 297 DVWSFGILLWE 307
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 51/215 (23%)
Query: 466 FKEELGRGGSGAVYKG-VLADGRAV--AVKRLGDLHQGEEV--FWAEVSTIGKI-YHMNL 519
F++ +G G G V K + DG + A+KR+ + ++ F E+ + K+ +H N+
Sbjct: 19 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGT------------- 566
+ + G C + L EY +L L S L F +A T
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 567 ---AKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQFSQIRGTK 607
A+G+ YL +F KIADFGL++ Q ++ T
Sbjct: 139 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR--------GQEVYVKKTM 190
Query: 608 GYMAPEWAS----NLPI-TAKVDVYSYGVVILEMV 637
G + W + N + T DV+SYGV++ E+V
Sbjct: 191 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 225
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 78/203 (38%), Gaps = 37/203 (18%)
Query: 468 EELGRG-----------GSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
EELG G G+G Y R + R G E EV+ + +I H
Sbjct: 32 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRG---VSREEIEREVNILREIRH 88
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-- 574
N++ + +LI E V L L L E + G+ YLH
Sbjct: 89 PNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK 148
Query: 575 ---HDEFEP---------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
H + +P K+ DFG+A + G+ +F I GT ++APE +
Sbjct: 149 RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN---EFKNIFGTPEFVAPEIVN 205
Query: 617 NLPITAKVDVYSYGVVILEMVKG 639
P+ + D++S GV+ ++ G
Sbjct: 206 YEPLGLEADMWSIGVITYILLSG 228
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 28/193 (14%)
Query: 468 EELGRGGSGAVYKG-------VLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLV 520
+ELG G G V KG V + D +E+ AE + + ++ + +V
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL-AEANVMQQLDNPYIV 91
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF-- 578
RM G C E +L+ E E L+K+L + + K ++ + G+ YL F
Sbjct: 92 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 150
Query: 579 --------------EPKIADFGLAKLSQRGSNSSQFSQIRGT--KGYMAPEWASNLPITA 622
KI+DFGL+K + R + +Q G + APE + ++
Sbjct: 151 RDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 209
Query: 623 KVDVYSYGVVILE 635
K DV+S+GV++ E
Sbjct: 210 KSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 28/193 (14%)
Query: 468 EELGRGGSGAVYKG-------VLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLV 520
+ELG G G V KG V + D +E+ AE + + ++ + +V
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL-AEANVMQQLDNPYIV 91
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF-- 578
RM G C E +L+ E E L+K+L + + K ++ + G+ YL F
Sbjct: 92 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 150
Query: 579 --------------EPKIADFGLAKLSQRGSNSSQFSQIRGT--KGYMAPEWASNLPITA 622
KI+DFGL+K + R + +Q G + APE + ++
Sbjct: 151 RDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 209
Query: 623 KVDVYSYGVVILE 635
K DV+S+GV++ E
Sbjct: 210 KSDVWSFGVLMWE 222
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 69/219 (31%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWG-- 524
E +G GG G V+K DG+ +KR+ ++ E EV + K+ H+N+V G
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE---REVKALAKLDHVNIVHYNGCW 73
Query: 525 ---------------------------FCSEGRHRLLIYEYVEK---QSLDKHLFSSYFL 554
FC +G + +++EK + LDK L F
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKG----TLEQWIEKRRGEKLDKVLALELFE 129
Query: 555 GWKERFKVALGTAKGLAYLHH----------------DEFEPKIADFGLAKLSQRGSNSS 598
KG+ Y+H D + KI DFGL + N
Sbjct: 130 Q----------ITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLK---NDG 176
Query: 599 QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMV 637
+ + +GT YM+PE S+ +VD+Y+ G+++ E++
Sbjct: 177 KRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 51/215 (23%)
Query: 466 FKEELGRGGSGAVYKG-VLADGRAV--AVKRLGDLHQGEEV--FWAEVSTIGKI-YHMNL 519
F++ +G G G V K + DG + A+KR+ + ++ F E+ + K+ +H N+
Sbjct: 26 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 85
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGT------------- 566
+ + G C + L EY +L L S L F +A T
Sbjct: 86 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 567 ---AKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQFSQIRGTK 607
A+G+ YL +F KIADFGL++ Q ++ T
Sbjct: 146 ADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR--------GQEVYVKKTM 197
Query: 608 GYMAPEWAS----NLPI-TAKVDVYSYGVVILEMV 637
G + W + N + T DV+SYGV++ E+V
Sbjct: 198 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 232
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 28/193 (14%)
Query: 468 EELGRGGSGAVYKG-------VLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLV 520
+ELG G G V KG V + D +E+ AE + + ++ + +V
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL-AEANVMQQLDNPYIV 75
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF-- 578
RM G C E +L+ E E L+K+L + + K ++ + G+ YL F
Sbjct: 76 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 134
Query: 579 --------------EPKIADFGLAKLSQRGSNSSQFSQIRGT--KGYMAPEWASNLPITA 622
KI+DFGL+K + R + +Q G + APE + ++
Sbjct: 135 RDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 193
Query: 623 KVDVYSYGVVILE 635
K DV+S+GV++ E
Sbjct: 194 KSDVWSFGVLMWE 206
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 28/204 (13%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
ELK ELG G G V+K V ++L L + + + ++
Sbjct: 2 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 61
Query: 518 N---LVRMWG-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL 573
N +V +G F S+G + + E+++ SLD+ L + + + KV++ KGL YL
Sbjct: 62 NSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 574 H------HDEFEP-----------KIADFGLA-KLSQRGSNSSQFSQIRGTKGYMAPEWA 615
H + +P K+ DFG++ +L +NS GT+ YM+PE
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSYMSPERL 175
Query: 616 SNLPITAKVDVYSYGVVILEMVKG 639
+ + D++S G+ ++EM G
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 51/215 (23%)
Query: 466 FKEELGRGGSGAVYKG-VLADGRAV--AVKRLGDLHQGEEV--FWAEVSTIGKI-YHMNL 519
F++ +G G G V K + DG + A+KR+ + ++ F E+ + K+ +H N+
Sbjct: 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGT------------- 566
+ + G C + L EY +L L S L F +A T
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 567 ---AKGLAYLHHDEF----------------EPKIADFGLAKLSQRGSNSSQFSQIRGTK 607
A+G+ YL +F KIADFGL++ Q ++ T
Sbjct: 149 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR--------GQEVYVKKTM 200
Query: 608 GYMAPEWAS----NLPI-TAKVDVYSYGVVILEMV 637
G + W + N + T DV+SYGV++ E+V
Sbjct: 201 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 235
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 28/193 (14%)
Query: 468 EELGRGGSGAVYKG-------VLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLV 520
+ELG G G V KG V + D +E+ AE + + ++ + +V
Sbjct: 11 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL-AEANVMQQLDNPYIV 69
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF-- 578
RM G C E +L+ E E L+K+L + + K ++ + G+ YL F
Sbjct: 70 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 128
Query: 579 --------------EPKIADFGLAKLSQRGSNSSQFSQIRGT--KGYMAPEWASNLPITA 622
KI+DFGL+K + R + +Q G + APE + ++
Sbjct: 129 RDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 187
Query: 623 KVDVYSYGVVILE 635
K DV+S+GV++ E
Sbjct: 188 KSDVWSFGVLMWE 200
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 28/193 (14%)
Query: 468 EELGRGGSGAVYKG-------VLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLV 520
+ELG G G V KG V + D +E+ AE + + ++ + +V
Sbjct: 31 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL-AEANVMQQLDNPYIV 89
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF-- 578
RM G C E +L+ E E L+K+L + + K ++ + G+ YL F
Sbjct: 90 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 148
Query: 579 --------------EPKIADFGLAKLSQRGSNSSQFSQIRGT--KGYMAPEWASNLPITA 622
KI+DFGL+K + R + +Q G + APE + ++
Sbjct: 149 RDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 207
Query: 623 KVDVYSYGVVILE 635
K DV+S+GV++ E
Sbjct: 208 KSDVWSFGVLMWE 220
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 56/231 (24%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYK----GVLA--DGRAVAVKRLGDLHQG--EEVFWAEVS 509
E ++ + ++G G G V++ G+L VAVK L + + F E +
Sbjct: 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS------------------- 550
+ + + N+V++ G C+ G+ L++EY+ L++ L S
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 551 -----SYFLGWKERFKVALGTAKGLAYLHHDEFEP----------------KIADFGLAK 589
L E+ +A A G+AYL +F KIADFGL+
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLS- 221
Query: 590 LSQRGSNSSQFSQIRGTKG----YMAPEWASNLPITAKVDVYSYGVVILEM 636
R S+ + + G +M PE T + DV++YGVV+ E+
Sbjct: 222 ---RNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 269
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 72/173 (41%), Gaps = 22/173 (12%)
Query: 486 GRAVAVKRL--GDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR--LLIYEYVEK 541
G VAVK L G Q + E+ + +YH ++V+ G C + + L+ EYV
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 97
Query: 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEFEP----------------KIADF 585
SL +L + +G + A +G+AYLH + KI DF
Sbjct: 98 GSLRDYL-PRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDF 156
Query: 586 GLAKLSQRGSNSSQFSQIRGTKGY-MAPEWASNLPITAKVDVYSYGVVILEMV 637
GLAK G + + + + APE DV+S+GV + E++
Sbjct: 157 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 209
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 454 FSYAELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGK 513
+ ELK ELG G G V+K V ++L L + + +
Sbjct: 1 MALGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV 60
Query: 514 IYHMN---LVRMWG-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKG 569
++ N +V +G F S+G + + E+++ SLD+ L + + + KV++ KG
Sbjct: 61 LHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 119
Query: 570 LAYLH------HDEFEP-----------KIADFGLA-KLSQRGSNSSQFSQIRGTKGYMA 611
L YL H + +P K+ DFG++ +L +N + GT+ YM+
Sbjct: 120 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMAN-----EFVGTRSYMS 174
Query: 612 PEWASNLPITAKVDVYSYGVVILEMVKG 639
PE + + D++S G+ ++EM G
Sbjct: 175 PERLQGTHYSVQSDIWSMGLSLVEMAVG 202
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 28/193 (14%)
Query: 468 EELGRGGSGAVYKG-------VLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLV 520
+ELG G G V KG V + D +E+ AE + + ++ + +V
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL-AEANVMQQLDNPYIV 71
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF-- 578
RM G C E +L+ E E L+K+L + + K ++ + G+ YL F
Sbjct: 72 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 130
Query: 579 --------------EPKIADFGLAKLSQRGSNSSQFSQIRGT--KGYMAPEWASNLPITA 622
KI+DFGL+K + R + +Q G + APE + ++
Sbjct: 131 RDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 189
Query: 623 KVDVYSYGVVILE 635
K DV+S+GV++ E
Sbjct: 190 KSDVWSFGVLMWE 202
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 74/191 (38%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVY-----KGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY K V K + E E+ ++H N++R++
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + R LI EY + L K L S + + A L Y H H + +
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKVIHRDIK 150
Query: 580 PK-----------IADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P+ IADFG + + S + + GT Y+ PE KVD++
Sbjct: 151 PENLLLGLKGELKIADFGWSV----HAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWC 206
Query: 629 YGVVILEMVKG 639
GV+ E++ G
Sbjct: 207 IGVLCYELLVG 217
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 72/173 (41%), Gaps = 22/173 (12%)
Query: 486 GRAVAVKRL--GDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHR--LLIYEYVEK 541
G VAVK L G Q + E+ + +YH ++V+ G C + + L+ EYV
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 96
Query: 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEFEP----------------KIADF 585
SL +L + +G + A +G+AYLH + KI DF
Sbjct: 97 GSLRDYL-PRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDF 155
Query: 586 GLAKLSQRGSNSSQFSQIRGTKGY-MAPEWASNLPITAKVDVYSYGVVILEMV 637
GLAK G + + + + APE DV+S+GV + E++
Sbjct: 156 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 208
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 28/193 (14%)
Query: 468 EELGRGGSGAVYKG-------VLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLV 520
+ELG G G V KG V + D +E+ AE + + ++ + +V
Sbjct: 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL-AEANVMQQLDNPYIV 81
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF-- 578
RM G C E +L+ E E L+K+L + + K ++ + G+ YL F
Sbjct: 82 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 140
Query: 579 --------------EPKIADFGLAKLSQRGSNSSQFSQIRGT--KGYMAPEWASNLPITA 622
KI+DFGL+K + R + +Q G + APE + ++
Sbjct: 141 RDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 199
Query: 623 KVDVYSYGVVILE 635
K DV+S+GV++ E
Sbjct: 200 KSDVWSFGVLMWE 212
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 79/191 (41%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E EV + H N++R++G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY ++ + L + A L+Y H H + +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + SS+ +++ GT Y+ PE KVD++S
Sbjct: 136 PENLLLGSAGELKIADFGWSV----HAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWS 191
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 192 LGVLCYEFLVG 202
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 44/215 (20%)
Query: 463 TKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRM 522
T +E +G+G G V++G G VAVK + AE+ + H N++
Sbjct: 43 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENIL-- 99
Query: 523 WGFCSEGR-------HRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH- 574
GF + L+ +Y E SL +L + Y + + K+AL TA GLA+LH
Sbjct: 100 -GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHM 157
Query: 575 ------------HDEFEPK-----------IADFGLAKLSQRGSNSSQFSQIR--GTKGY 609
H + + K IAD GLA +++ + GTK Y
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 217
Query: 610 MAPEW------ASNLPITAKVDVYSYGVVILEMVK 638
MAPE + + D+Y+ G+V E+ +
Sbjct: 218 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 252
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 97/222 (43%), Gaps = 32/222 (14%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHM 517
ELK ELG G G V+K V ++L L + + + ++
Sbjct: 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 88
Query: 518 N---LVRMWG-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL 573
N +V +G F S+G + + E+++ SLD+ L + + + KV++ KGL YL
Sbjct: 89 NSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 147
Query: 574 H------HDEFEP-----------KIADFGLA-KLSQRGSNSSQFSQIRGTKGYMAPEWA 615
H + +P K+ DFG++ +L +NS GT+ YM+PE
Sbjct: 148 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSYMSPERL 202
Query: 616 SNLPITAKVDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAEL 657
+ + D++S G+ ++EM G + + + +E EL
Sbjct: 203 QGTHYSVQSDIWSMGLSLVEMAVG----RYPIPPPDAKELEL 240
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HD 576
L++E+V+ Q L K + +S G +GLA+ H H
Sbjct: 72 DVIHTENKLYLVFEHVD-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 130
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKV 624
+ +P K+ADFGLA+ G + T Y APE + V
Sbjct: 131 DLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 188
Query: 625 DVYSYGVVILEMV 637
D++S G + EMV
Sbjct: 189 DIWSLGCIFAEMV 201
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 78/193 (40%), Gaps = 27/193 (13%)
Query: 470 LGRGGSGAVYKGVLAD------GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
LG+GG ++ AD G+ V L HQ E++ E+S + H ++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQHVVGFH 83
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH--------- 574
GF + ++ E ++SL + L E G YLH
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 575 -------HDEFEPKIADFGLA-KLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDV 626
+++ E KI DFGLA K+ G GT Y+APE S + +VDV
Sbjct: 144 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC---GTPNYIAPEVLSKKGHSFEVDV 200
Query: 627 YSYGVVILEMVKG 639
+S G ++ ++ G
Sbjct: 201 WSIGCIMYTLLVG 213
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 78/193 (40%), Gaps = 27/193 (13%)
Query: 470 LGRGGSGAVYKGVLAD------GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
LG+GG ++ AD G+ V L HQ E++ E+S + H ++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQHVVGFH 83
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH--------- 574
GF + ++ E ++SL + L E G YLH
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 575 -------HDEFEPKIADFGLA-KLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDV 626
+++ E KI DFGLA K+ G GT Y+APE S + +VDV
Sbjct: 144 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC---GTPNYIAPEVLSKKGHSFEVDV 200
Query: 627 YSYGVVILEMVKG 639
+S G ++ ++ G
Sbjct: 201 WSIGCIMYTLLVG 213
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 78/193 (40%), Gaps = 27/193 (13%)
Query: 470 LGRGGSGAVYKGVLAD------GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
LG+GG ++ AD G+ V L HQ E++ E+S + H ++V
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQHVVGFH 87
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH--------- 574
GF + ++ E ++SL + L E G YLH
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 147
Query: 575 -------HDEFEPKIADFGLA-KLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDV 626
+++ E KI DFGLA K+ G GT Y+APE S + +VDV
Sbjct: 148 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC---GTPNYIAPEVLSKKGHSFEVDV 204
Query: 627 YSYGVVILEMVKG 639
+S G ++ ++ G
Sbjct: 205 WSIGCIMYTLLVG 217
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 28/205 (13%)
Query: 457 AELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
ELK ELG G G V+K V ++L L + + + ++
Sbjct: 20 GELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 79
Query: 517 MN---LVRMWG-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAY 572
N +V +G F S+G + + E+++ SLD+ L + + + KV++ KGL Y
Sbjct: 80 CNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTY 138
Query: 573 LH------HDEFEP-----------KIADFGLA-KLSQRGSNSSQFSQIRGTKGYMAPEW 614
L H + +P K+ DFG++ +L +NS GT+ YM+PE
Sbjct: 139 LREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSYMSPER 193
Query: 615 ASNLPITAKVDVYSYGVVILEMVKG 639
+ + D++S G+ ++EM G
Sbjct: 194 LQGTHYSVQSDIWSMGLSLVEMAVG 218
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 44/215 (20%)
Query: 463 TKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRM 522
T +E +G+G G V++G G VAVK + AE+ + H N++
Sbjct: 30 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENIL-- 86
Query: 523 WGFCSEGR-------HRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH- 574
GF + L+ +Y E SL +L + Y + + K+AL TA GLA+LH
Sbjct: 87 -GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHM 144
Query: 575 ------------HDEFEPK-----------IADFGLAKLSQRGSNSSQFSQIR--GTKGY 609
H + + K IAD GLA +++ + GTK Y
Sbjct: 145 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 204
Query: 610 MAPEW------ASNLPITAKVDVYSYGVVILEMVK 638
MAPE + + D+Y+ G+V E+ +
Sbjct: 205 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 239
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 44/215 (20%)
Query: 463 TKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRM 522
T +E +G+G G V++G G VAVK + AE+ + H N++
Sbjct: 5 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENIL-- 61
Query: 523 WGFCSEGR-------HRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH- 574
GF + L+ +Y E SL +L + Y + + K+AL TA GLA+LH
Sbjct: 62 -GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHM 119
Query: 575 ------------HDEFEPK-----------IADFGLAKLSQRGSNSSQFSQIR--GTKGY 609
H + + K IAD GLA +++ + GTK Y
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 179
Query: 610 MAPEW------ASNLPITAKVDVYSYGVVILEMVK 638
MAPE + + D+Y+ G+V E+ +
Sbjct: 180 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 214
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 44/215 (20%)
Query: 463 TKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRM 522
T +E +G+G G V++G G VAVK + AE+ + H N++
Sbjct: 4 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENIL-- 60
Query: 523 WGFCSEGR-------HRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH- 574
GF + L+ +Y E SL +L + Y + + K+AL TA GLA+LH
Sbjct: 61 -GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHM 118
Query: 575 ------------HDEFEPK-----------IADFGLAKLSQRGSNSSQFS--QIRGTKGY 609
H + + K IAD GLA +++ + GTK Y
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 178
Query: 610 MAPEW------ASNLPITAKVDVYSYGVVILEMVK 638
MAPE + + D+Y+ G+V E+ +
Sbjct: 179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 213
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 22/173 (12%)
Query: 486 GRAVAVKRL-GDLHQGEEVFW-AEVSTIGKIYHMNLVRMWGFCSE-GRHRL-LIYEYVEK 541
G VAVK L D W E+ + +YH ++++ G C + G L L+ EYV
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPL 119
Query: 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEFEP----------------KIADF 585
SL +L + +G + A +G+AYLH + KI DF
Sbjct: 120 GSLRDYL-PRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDF 178
Query: 586 GLAKLSQRGSNSSQFSQIRGTKGY-MAPEWASNLPITAKVDVYSYGVVILEMV 637
GLAK G + + + + APE DV+S+GV + E++
Sbjct: 179 GLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HD 576
L++E++ Q L K + +S G +GLA+ H H
Sbjct: 68 DVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 126
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKV 624
+ +P K+ADFGLA+ G ++ T Y APE + V
Sbjct: 127 DLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 184
Query: 625 DVYSYGVVILEMV 637
D++S G + EMV
Sbjct: 185 DIWSLGCIFAEMV 197
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HD 576
L++E++ Q L K + +S G +GLA+ H H
Sbjct: 69 DVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKV 624
+ +P K+ADFGLA+ G ++ T Y APE + V
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 625 DVYSYGVVILEMV 637
D++S G + EMV
Sbjct: 186 DIWSLGCIFAEMV 198
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HD 576
L++E++ Q L K + +S G +GLA+ H H
Sbjct: 68 DVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 126
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKV 624
+ +P K+ADFGLA+ G ++ T Y APE + V
Sbjct: 127 DLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 184
Query: 625 DVYSYGVVILEMV 637
D++S G + EMV
Sbjct: 185 DIWSLGCIFAEMV 197
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 44/215 (20%)
Query: 463 TKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRM 522
T +E +G+G G V++G G VAVK + AE+ + H N++
Sbjct: 10 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENIL-- 66
Query: 523 WGFCSEGR-------HRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH- 574
GF + L+ +Y E SL +L + Y + + K+AL TA GLA+LH
Sbjct: 67 -GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHM 124
Query: 575 ------------HDEFEPK-----------IADFGLAKLSQRGSNSSQFSQIR--GTKGY 609
H + + K IAD GLA +++ + GTK Y
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 184
Query: 610 MAPEW------ASNLPITAKVDVYSYGVVILEMVK 638
MAPE + + D+Y+ G+V E+ +
Sbjct: 185 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 219
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 85/213 (39%), Gaps = 46/213 (21%)
Query: 470 LGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSE 528
LG+G G V K A D R A+K++ + +EV + + H +VR + E
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 529 GRH-------------RLLIYEYVEKQSLDKHLFSSYFLGWKERF-KVALGTAKGLAYLH 574
R+ + EY E +L + S ++ + ++ + L+Y+H
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH 133
Query: 575 -----HDEFEP-----------KIADFGLAKLSQR-------------GSNSSQFSQIRG 605
H + +P KI DFGLAK R GS+ + S I G
Sbjct: 134 SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI-G 192
Query: 606 TKGYMAPEWASNL-PITAKVDVYSYGVVILEMV 637
T Y+A E K+D+YS G++ EM+
Sbjct: 193 TAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 34/201 (16%)
Query: 470 LGRGGSGAVYKGVLA--DGRA--VAVK--RLGDLHQGE-EVFWAEVSTIGKIYHMNLVRM 522
LG G G+V +G L DG + VAVK +L + Q E E F +E + + H N++R+
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 523 WGFCSEGRHR-----LLIYEYVEKQSLDKHLFSSYF------LGWKERFKVALGTAKGLA 571
G C E + ++I +++ L +L S + + K + A G+
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 572 YLHHDEFEPK----------------IADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA 615
YL + F + +ADFGL+K G Q + ++A E
Sbjct: 162 YLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESL 221
Query: 616 SNLPITAKVDVYSYGVVILEM 636
++ T+K DV+++GV + E+
Sbjct: 222 ADRVYTSKSDVWAFGVTMWEI 242
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 72
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HD 576
L++E++ Q L K + +S G +GLA+ H H
Sbjct: 73 DVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 131
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKV 624
+ +P K+ADFGLA+ G ++ T Y APE + V
Sbjct: 132 DLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 189
Query: 625 DVYSYGVVILEMV 637
D++S G + EMV
Sbjct: 190 DIWSLGCIFAEMV 202
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HD 576
L++E++ Q L K + +S G +GLA+ H H
Sbjct: 69 DVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKV 624
+ +P K+ADFGLA+ G ++ T Y APE + V
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 625 DVYSYGVVILEMV 637
D++S G + EMV
Sbjct: 186 DIWSLGCIFAEMV 198
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HD 576
L++E++ Q L K + +S G +GLA+ H H
Sbjct: 69 DVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKV 624
+ +P K+ADFGLA+ G ++ T Y APE + V
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAV 185
Query: 625 DVYSYGVVILEMV 637
D++S G + EMV
Sbjct: 186 DIWSLGCIFAEMV 198
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HD 576
L++E++ Q L K + +S G +GLA+ H H
Sbjct: 76 DVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 134
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKV 624
+ +P K+ADFGLA+ G ++ T Y APE + V
Sbjct: 135 DLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAV 192
Query: 625 DVYSYGVVILEMV 637
D++S G + EMV
Sbjct: 193 DIWSLGCIFAEMV 205
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HD 576
L++E++ Q L K + +S G +GLA+ H H
Sbjct: 70 DVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 128
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKV 624
+ +P K+ADFGLA+ G ++ T Y APE + V
Sbjct: 129 DLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 186
Query: 625 DVYSYGVVILEMV 637
D++S G + EMV
Sbjct: 187 DIWSLGCIFAEMV 199
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E EV + H N++R++G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY ++ + L + A L+Y H H + +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 136
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + SS+ + + GT Y+ PE KVD++S
Sbjct: 137 PENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWS 192
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 193 LGVLCYEFLVG 203
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HD 576
L++E++ Q L K + +S G +GLA+ H H
Sbjct: 76 DVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 134
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKV 624
+ +P K+ADFGLA+ G ++ T Y APE + V
Sbjct: 135 DLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 192
Query: 625 DVYSYGVVILEMV 637
D++S G + EMV
Sbjct: 193 DIWSLGCIFAEMV 205
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 78/193 (40%), Gaps = 27/193 (13%)
Query: 470 LGRGGSGAVYKGVLAD------GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
LG+GG ++ AD G+ V L HQ E++ E+S + H ++V
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQHVVGFH 107
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH--------- 574
GF + ++ E ++SL + L E G YLH
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 167
Query: 575 -------HDEFEPKIADFGLA-KLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDV 626
+++ E KI DFGLA K+ G GT Y+APE S + +VDV
Sbjct: 168 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC---GTPNYIAPEVLSKKGHSFEVDV 224
Query: 627 YSYGVVILEMVKG 639
+S G ++ ++ G
Sbjct: 225 WSIGCIMYTLLVG 237
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E EV + H N++R++G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY ++ + L + A L+Y H H + +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + SS+ + + GT Y+ PE KVD++S
Sbjct: 136 PENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWS 191
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 192 LGVLCYEFLVG 202
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 78/193 (40%), Gaps = 27/193 (13%)
Query: 470 LGRGGSGAVYKGVLAD------GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
LG+GG ++ AD G+ V L HQ E++ E+S + H ++V
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQHVVGFH 105
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH--------- 574
GF + ++ E ++SL + L E G YLH
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 165
Query: 575 -------HDEFEPKIADFGLA-KLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDV 626
+++ E KI DFGLA K+ G GT Y+APE S + +VDV
Sbjct: 166 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC---GTPNYIAPEVLSKKGHSFEVDV 222
Query: 627 YSYGVVILEMVKG 639
+S G ++ ++ G
Sbjct: 223 WSIGCIMYTLLVG 235
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 26/192 (13%)
Query: 468 EELGRGGSGAVYKG------VLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVR 521
+ELG G G V KG V+ +K + ++ AE + + ++ + +VR
Sbjct: 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 434
Query: 522 MWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF--- 578
M G C E +L+ E E L+K+L + + K ++ + G+ YL F
Sbjct: 435 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 493
Query: 579 -------------EPKIADFGLAKLSQRGSNSSQFSQIRGT--KGYMAPEWASNLPITAK 623
KI+DFGL+K + R + +Q G + APE + ++K
Sbjct: 494 DLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 552
Query: 624 VDVYSYGVVILE 635
DV+S+GV++ E
Sbjct: 553 SDVWSFGVLMWE 564
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E EV + H N++R++G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY ++ + L + A L+Y H H + +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 136
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + SS+ + + GT Y+ PE KVD++S
Sbjct: 137 PENLLLGSAGELKIADFGWSC----HAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWS 192
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 193 LGVLCYEFLVG 203
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 44/215 (20%)
Query: 463 TKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRM 522
T +E +G+G G V++G G VAVK + AE+ + H N++
Sbjct: 7 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENIL-- 63
Query: 523 WGFCSEGR-------HRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH- 574
GF + L+ +Y E SL +L + Y + + K+AL TA GLA+LH
Sbjct: 64 -GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHM 121
Query: 575 ------------HDEFEPK-----------IADFGLAKLSQRGSNSSQFSQIR--GTKGY 609
H + + K IAD GLA +++ + GTK Y
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 181
Query: 610 MAPEW------ASNLPITAKVDVYSYGVVILEMVK 638
MAPE + + D+Y+ G+V E+ +
Sbjct: 182 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 216
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E EV + H N++R++G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY ++ + L + A L+Y H H + +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 161
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + SS+ + + GT Y+ PE KVD++S
Sbjct: 162 PENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 217
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 218 LGVLCYEFLVG 228
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 26/192 (13%)
Query: 468 EELGRGGSGAVYKG------VLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVR 521
+ELG G G V KG V+ +K + ++ AE + + ++ + +VR
Sbjct: 376 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 435
Query: 522 MWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF--- 578
M G C E +L+ E E L+K+L + + K ++ + G+ YL F
Sbjct: 436 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 494
Query: 579 -------------EPKIADFGLAKLSQRGSNSSQFSQIRGT--KGYMAPEWASNLPITAK 623
KI+DFGL+K + R + +Q G + APE + ++K
Sbjct: 495 DLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 553
Query: 624 VDVYSYGVVILE 635
DV+S+GV++ E
Sbjct: 554 SDVWSFGVLMWE 565
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 81/194 (41%), Gaps = 29/194 (14%)
Query: 470 LGRGGSGAVYKGVLAD------GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
LG+GG ++ AD G+ V L HQ E++ E+S + H ++V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQHVVGFH 81
Query: 524 GFCSEGRHRLLIYEYVEKQSL-DKHLFSSYFLGWKERFKVALGTAKGLAYLH-------- 574
GF + ++ E ++SL + H + R+ + G YLH
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQYLHRNRVIHRD 140
Query: 575 --------HDEFEPKIADFGLA-KLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVD 625
+++ E KI DFGLA K+ G GT Y+APE S + +VD
Sbjct: 141 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC---GTPNYIAPEVLSKKGHSFEVD 197
Query: 626 VYSYGVVILEMVKG 639
V+S G ++ ++ G
Sbjct: 198 VWSIGCIMYTLLVG 211
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 79/188 (42%), Gaps = 18/188 (9%)
Query: 469 ELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWA----EVSTIGKIYHMNLVRMW 523
E+G G GAVY + + VA+K++ + W EV + K+ H N ++
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-HDEFEPKI 582
G L+ EY + D L E V G +GLAYLH H+ +
Sbjct: 82 GCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDV 141
Query: 583 -------ADFGLAKLSQRGSNS--SQFSQIRGTKGYMAPEWASNL---PITAKVDVYSYG 630
++ GL KL GS S + + GT +MAPE + KVDV+S G
Sbjct: 142 KAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 201
Query: 631 VVILEMVK 638
+ +E+ +
Sbjct: 202 ITCIELAE 209
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 78/188 (41%), Gaps = 18/188 (9%)
Query: 469 ELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWA----EVSTIGKIYHMNLVRMW 523
E+G G GAVY + + VA+K++ + W EV + K+ H N ++
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEFEPK-- 581
G L+ EY + D L E V G +GLAYLH +
Sbjct: 121 GCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDV 180
Query: 582 ------IADFGLAKLSQRGSNS--SQFSQIRGTKGYMAPEWASNL---PITAKVDVYSYG 630
+++ GL KL GS S + + GT +MAPE + KVDV+S G
Sbjct: 181 KAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 240
Query: 631 VVILEMVK 638
+ +E+ +
Sbjct: 241 ITCIELAE 248
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E EV + H N++R++G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY ++ + L + A L+Y H H + +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + SS+ + + GT Y+ PE KVD++S
Sbjct: 136 PENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 191
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 192 LGVLCYEFLVG 202
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E EV + H N++R++G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY ++ + L + A L+Y H H + +
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 152
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + SS+ + + GT Y+ PE KVD++S
Sbjct: 153 PENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 208
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 209 LGVLCYEFLVG 219
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E EV + H N++R++G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY ++ + L + A L+Y H H + +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + SS+ + + GT Y+ PE KVD++S
Sbjct: 139 PENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 194
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 195 LGVLCYEFLVG 205
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E EV + H N++R++G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY ++ + L + A L+Y H H + +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + SS+ + + GT Y+ PE KVD++S
Sbjct: 136 PENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWS 191
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 192 LGVLCYEFLVG 202
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 28/210 (13%)
Query: 452 RRFSYAELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTI 511
++ ELK ELG G G V K + ++L L + + +
Sbjct: 6 QKAKVGELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIREL 65
Query: 512 GKIYHMN---LVRMWG-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTA 567
++ N +V +G F S+G + + E+++ SLD+ L + + + KV++
Sbjct: 66 QVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKEAKRIPEEILGKVSIAVL 124
Query: 568 KGLAYLH------HDEFEP-----------KIADFGLA-KLSQRGSNSSQFSQIRGTKGY 609
+GLAYL H + +P K+ DFG++ +L +NS GT+ Y
Sbjct: 125 RGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSY 179
Query: 610 MAPEWASNLPITAKVDVYSYGVVILEMVKG 639
MAPE + + D++S G+ ++E+ G
Sbjct: 180 MAPERLQGTHYSVQSDIWSMGLSLVELAVG 209
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E EV + H N++R++G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY ++ + L + A L+Y H H + +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 140
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + SS+ + + GT Y+ PE KVD++S
Sbjct: 141 PENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWS 196
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 197 LGVLCYEFLVG 207
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E EV + H N++R++G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY ++ + L + A L+Y H H + +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 140
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + SS+ + + GT Y+ PE KVD++S
Sbjct: 141 PENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 196
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 197 LGVLCYEFLVG 207
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HD 576
L++E++ Q L K + +S G +GLA+ H H
Sbjct: 69 DVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKV 624
+ +P K+ADFGLA+ G + T Y APE + V
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 625 DVYSYGVVILEMV 637
D++S G + EMV
Sbjct: 186 DIWSLGCIFAEMV 198
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 28/201 (13%)
Query: 464 KSFKEELGRGGS-GAVYKGVLADGRAVAVKRLGDLHQGEEV--FWAEVSTIGKIYHMNLV 520
+ F E +G G G VYK + +A ++ D EE+ + E+ + H N+V
Sbjct: 11 EDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV 70
Query: 521 RMW-GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALG-TAKGLAYLHHDEF 578
++ F E +LI E+ ++D + + + +V T L YLH ++
Sbjct: 71 KLLDAFYYENNLWILI-EFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKI 129
Query: 579 ----------------EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-----WASN 617
+ K+ADFG++ + R + S I GT +MAPE + +
Sbjct: 130 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI-GTPYWMAPEVVMCETSKD 188
Query: 618 LPITAKVDVYSYGVVILEMVK 638
P K DV+S G+ ++EM +
Sbjct: 189 RPYDYKADVWSLGITLIEMAE 209
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 79/191 (41%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + + A+K L L + E EV + H N++R++G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY ++ + L + A L+Y H H + +
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKVIHRDIK 135
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + SS+ + + GT Y+ PE KVD++S
Sbjct: 136 PENLLLGSAGELKIADFGWSV----HAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWS 191
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 192 LGVLCYEFLVG 202
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 75/203 (36%), Gaps = 37/203 (18%)
Query: 468 EELGRG-----------GSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
EELG G +G Y R R G E EVS + ++ H
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRG---VSREEIEREVSILRQVLH 74
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-- 574
N++ + +LI E V L L L +E G+ YLH
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 575 ---HDEFEP---------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
H + +P K+ DFGLA + G +F I GT ++APE +
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV---EFKNIFGTPEFVAPEIVN 191
Query: 617 NLPITAKVDVYSYGVVILEMVKG 639
P+ + D++S GV+ ++ G
Sbjct: 192 YEPLGLEADMWSIGVITYILLSG 214
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E EV + H N++R++G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY ++ + L + A L+Y H H + +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 140
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + SS+ + + GT Y+ PE KVD++S
Sbjct: 141 PENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWS 196
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 197 LGVLCYEFLVG 207
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HD 576
L++E++ Q L K + +S G +GLA+ H H
Sbjct: 71 DVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 129
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKV 624
+ +P K+ADFGLA+ G + T Y APE + V
Sbjct: 130 DLKPENLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 187
Query: 625 DVYSYGVVILEMV 637
D++S G + EMV
Sbjct: 188 DIWSLGCIFAEMV 200
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HD 576
L++E++ Q L K + +S G +GLA+ H H
Sbjct: 69 DVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKV 624
+ +P K+ADFGLA+ G + T Y APE + V
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 625 DVYSYGVVILEMV 637
D++S G + EMV
Sbjct: 186 DIWSLGCIFAEMV 198
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 75/203 (36%), Gaps = 37/203 (18%)
Query: 468 EELGRG-----------GSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
EELG G +G Y R R G E EVS + ++ H
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRG---VSREEIEREVSILRQVLH 74
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-- 574
N++ + +LI E V L L L +E G+ YLH
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 575 ---HDEFEP---------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
H + +P K+ DFGLA + G +F I GT ++APE +
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV---EFKNIFGTPEFVAPEIVN 191
Query: 617 NLPITAKVDVYSYGVVILEMVKG 639
P+ + D++S GV+ ++ G
Sbjct: 192 YEPLGLEADMWSIGVITYILLSG 214
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HD 576
L++E++ Q L K + +S G +GLA+ H H
Sbjct: 71 DVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 129
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKV 624
+ +P K+ADFGLA+ G + T Y APE + V
Sbjct: 130 DLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 187
Query: 625 DVYSYGVVILEMV 637
D++S G + EMV
Sbjct: 188 DIWSLGCIFAEMV 200
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 83/205 (40%), Gaps = 31/205 (15%)
Query: 461 KSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDL------HQGEEVFWAEVSTIGK 513
+S EELG+G V + V + G+ A K + HQ E E
Sbjct: 21 QSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLE---REARICRL 77
Query: 514 IYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL 573
+ H N+VR+ SE H LI++ V L + + + + + + + +
Sbjct: 78 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC 137
Query: 574 H-----HDEFEP--------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEW 614
H H + +P K+ADFGLA + G + F GT GY++PE
Sbjct: 138 HQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFG-FAGTPGYLSPEV 195
Query: 615 ASNLPITAKVDVYSYGVVILEMVKG 639
P VD+++ GV++ ++ G
Sbjct: 196 LRKDPYGKPVDLWACGVILYILLVG 220
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HD 576
L++E++ Q L K + +S G +GLA+ H H
Sbjct: 68 DVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 126
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKV 624
+ +P K+ADFGLA+ G + T Y APE + V
Sbjct: 127 DLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 184
Query: 625 DVYSYGVVILEMV 637
D++S G + EMV
Sbjct: 185 DIWSLGCIFAEMV 197
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 77/191 (40%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E EV + H N++R++G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY ++ + L + A L+Y H H + +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 161
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + SS+ + GT Y+ PE KVD++S
Sbjct: 162 PENLLLGSAGELKIADFGWSV----HAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWS 217
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 218 LGVLCYEFLVG 228
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HD 576
L++E++ Q L K + +S G +GLA+ H H
Sbjct: 69 DVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKV 624
+ +P K+ADFGLA+ G + T Y APE + V
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 625 DVYSYGVVILEMV 637
D++S G + EMV
Sbjct: 186 DIWSLGCIFAEMV 198
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 28/194 (14%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 524 GFCSEGRHRLLIYEYVE---KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----H 575
L++E+V K +D + L + + L +GLA+ H H
Sbjct: 68 DVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHRVLH 125
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAK 623
+ +P K+ADFGLA+ G ++ T Y APE +
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 183
Query: 624 VDVYSYGVVILEMV 637
VD++S G + EMV
Sbjct: 184 VDIWSLGCIFAEMV 197
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HD 576
L++E++ Q L K + +S G +GLA+ H H
Sbjct: 69 DVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKV 624
+ +P K+ADFGLA+ G + T Y APE + V
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 625 DVYSYGVVILEMV 637
D++S G + EMV
Sbjct: 186 DIWSLGCIFAEMV 198
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HD 576
L++E++ Q L K + +S G +GLA+ H H
Sbjct: 72 DVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 130
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKV 624
+ +P K+ADFGLA+ G + T Y APE + V
Sbjct: 131 DLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 188
Query: 625 DVYSYGVVILEMV 637
D++S G + EMV
Sbjct: 189 DIWSLGCIFAEMV 201
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HD 576
L++E++ Q L K + +S G +GLA+ H H
Sbjct: 71 DVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 129
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKV 624
+ +P K+ADFGLA+ G + T Y APE + V
Sbjct: 130 DLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 187
Query: 625 DVYSYGVVILEMV 637
D++S G + EMV
Sbjct: 188 DIWSLGCIFAEMV 200
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HD 576
L++E++ Q L K + +S G +GLA+ H H
Sbjct: 70 DVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 128
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKV 624
+ +P K+ADFGLA+ G + T Y APE + V
Sbjct: 129 DLKPENLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 186
Query: 625 DVYSYGVVILEMV 637
D++S G + EMV
Sbjct: 187 DIWSLGCIFAEMV 199
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HD 576
L++E++ Q L K + +S G +GLA+ H H
Sbjct: 68 DVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 126
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKV 624
+ +P K+ADFGLA+ G + T Y APE + V
Sbjct: 127 DLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 184
Query: 625 DVYSYGVVILEMV 637
D++S G + EMV
Sbjct: 185 DIWSLGCIFAEMV 197
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 72
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HD 576
L++E++ Q L K + +S G +GLA+ H H
Sbjct: 73 DVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 131
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKV 624
+ +P K+ADFGLA+ G + T Y APE + V
Sbjct: 132 DLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 189
Query: 625 DVYSYGVVILEMV 637
D++S G + EMV
Sbjct: 190 DIWSLGCIFAEMV 202
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HD 576
L++E++ Q L K + +S G +GLA+ H H
Sbjct: 70 DVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 128
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKV 624
+ +P K+ADFGLA+ G + T Y APE + V
Sbjct: 129 DLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 186
Query: 625 DVYSYGVVILEMV 637
D++S G + EMV
Sbjct: 187 DIWSLGCIFAEMV 199
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 23/153 (15%)
Query: 507 EVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGT 566
EVS + ++ H N++ + +LI E V L L L +E
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 567 AKGLAYLH-----HDEFEP---------------KIADFGLAKLSQRGSNSSQFSQIRGT 606
G+ YLH H + +P K+ DFGLA + G +F I GT
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV---EFKNIFGT 181
Query: 607 KGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
++APE + P+ + D++S GV+ ++ G
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 75/203 (36%), Gaps = 37/203 (18%)
Query: 468 EELGRG-----------GSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
EELG G +G Y R R G E EVS + ++ H
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRG---VSREEIEREVSILRQVLH 74
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-- 574
N++ + +LI E V L L L +E G+ YLH
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 575 ---HDEFEP---------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
H + +P K+ DFGLA + G +F I GT ++APE +
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV---EFKNIFGTPEFVAPEIVN 191
Query: 617 NLPITAKVDVYSYGVVILEMVKG 639
P+ + D++S GV+ ++ G
Sbjct: 192 YEPLGLEADMWSIGVITYILLSG 214
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HD 576
L++E++ Q L K + +S G +GLA+ H H
Sbjct: 72 DVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 130
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKV 624
+ +P K+ADFGLA+ G + T Y APE + V
Sbjct: 131 DLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 188
Query: 625 DVYSYGVVILEMV 637
D++S G + EMV
Sbjct: 189 DIWSLGCIFAEMV 201
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E EV + H N++R++G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY ++ + L + A L+Y H H + +
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 134
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + SS+ + + GT Y+ PE KVD++S
Sbjct: 135 PENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 190
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 191 LGVLCYEFLVG 201
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 77/191 (40%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E EV + H N++R++G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY ++ + L + A L+Y H H + +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 136
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + SS+ + GT Y+ PE KVD++S
Sbjct: 137 PENLLLGSAGELKIADFGWSV----HAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWS 192
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 193 LGVLCYEFLVG 203
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 87/229 (37%), Gaps = 52/229 (22%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKG-VLADGR-----AVAVKRLGDLHQGEE--VFWAEVS 509
E ++ F + LG G G V + G+ VAVK L +E +E+
Sbjct: 27 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 86
Query: 510 TIGKI-YHMNLVRMWGFCSEGRHRLLIYEYV-------------------------EKQS 543
+ + H N+V + G C+ G L+I EY + +
Sbjct: 87 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEG 146
Query: 544 LDKHLFSSYFLGWKERFKVALGTAKGLAYL------HHDEFE----------PKIADFGL 587
LDK L ++ + A+G+A+L H D KI DFGL
Sbjct: 147 LDKE--DGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL 204
Query: 588 AKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
A+ SN R +MAPE + T + DV+SYG+++ E+
Sbjct: 205 ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 253
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 81/195 (41%), Gaps = 31/195 (15%)
Query: 470 LGRGGSGAVYKGVLADGRA----VAVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVR 521
LG+G G VY LA R +A+K L L + E EV + H N++R
Sbjct: 20 LGKGKFGNVY---LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILR 76
Query: 522 MWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HD 576
++G+ + LI EY ++ + L + A L+Y H H
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHR 136
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVD 625
+ +P KIADFG + + SS+ + + GT Y+ PE KVD
Sbjct: 137 DIKPENLLLGSNGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 192
Query: 626 VYSYGVVILEMVKGI 640
++S GV+ E + G+
Sbjct: 193 LWSLGVLCYEFLVGM 207
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 75/203 (36%), Gaps = 37/203 (18%)
Query: 468 EELGRG-----------GSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYH 516
EELG G +G Y R R G E EVS + ++ H
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRG---VSREEIEREVSILRQVLH 74
Query: 517 MNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-- 574
N++ + +LI E V L L L +E G+ YLH
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 575 ---HDEFEP---------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
H + +P K+ DFGLA + G +F I GT ++APE +
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV---EFKNIFGTPEFVAPEIVN 191
Query: 617 NLPITAKVDVYSYGVVILEMVKG 639
P+ + D++S GV+ ++ G
Sbjct: 192 YEPLGLEADMWSIGVITYILLSG 214
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E EV + H N++R++G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY ++ + L + A L+Y H H + +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + SS+ + + GT Y+ PE KVD++S
Sbjct: 139 PENLLLGSAGELKIADFGWSV----HAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWS 194
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 195 LGVLCYEFLVG 205
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E EV + H N++R++G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY ++ + L + A L+Y H H + +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + SS+ + + GT Y+ PE KVD++S
Sbjct: 136 PENLLLGSAGELKIADFGWSV----HAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWS 191
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 192 LGVLCYEFLVG 202
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HD 576
L++E++ Q L K + +S G +GLA+ H H
Sbjct: 70 DVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 128
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKV 624
+ +P K+ADFGLA+ G + T Y APE + V
Sbjct: 129 DLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 186
Query: 625 DVYSYGVVILEMV 637
D++S G + EMV
Sbjct: 187 DIWSLGCIFAEMV 199
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 90/232 (38%), Gaps = 82/232 (35%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWG-- 524
E +G GG G V+K DG+ ++R+ ++ E EV + K+ H+N+V G
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE---REVKALAKLDHVNIVHYNGCW 74
Query: 525 ----------------------------------------FCSEGRHRLLIYEYVEK--- 541
FC +G + +++EK
Sbjct: 75 DGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKG----TLEQWIEKRRG 130
Query: 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFEP-----------KIADF 585
+ LDK L F KG+ Y+H H + +P KI DF
Sbjct: 131 EKLDKVLALELFEQ----------ITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDF 180
Query: 586 GLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMV 637
GL + N + ++ +GT YM+PE S+ +VD+Y+ G+++ E++
Sbjct: 181 GLVTSLK---NDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E EV + H N++R++G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY ++ + L + A L+Y H H + +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + SS+ + + GT Y+ PE KVD++S
Sbjct: 139 PENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 194
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 195 LGVLCYEFLVG 205
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 77/191 (40%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E EV + H N++R++G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY ++ + L + A L+Y H H + +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 137
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + SS+ + GT Y+ PE KVD++S
Sbjct: 138 PENLLLGSAGELKIADFGWSV----HAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWS 193
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 194 LGVLCYEFLVG 204
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 23/153 (15%)
Query: 507 EVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGT 566
EVS + ++ H N++ + +LI E V L L L +E
Sbjct: 65 EVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 567 AKGLAYLH-----HDEFEP---------------KIADFGLAKLSQRGSNSSQFSQIRGT 606
G+ YLH H + +P K+ DFGLA + G +F I GT
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV---EFKNIFGT 181
Query: 607 KGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
++APE + P+ + D++S GV+ ++ G
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HD 576
L++E++ Q L K + +S G +GL++ H H
Sbjct: 69 DVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHR 127
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKV 624
+ +P K+ADFGLA+ G ++ T Y APE + V
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 625 DVYSYGVVILEMV 637
D++S G + EMV
Sbjct: 186 DIWSLGCIFAEMV 198
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E EV + H N++R++G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY ++ + L + A L+Y H H + +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + SS+ + + GT Y+ PE KVD++S
Sbjct: 136 PENLLLGSAGELKIADFGWSV----HAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWS 191
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 192 LGVLCYEFLVG 202
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 87/220 (39%), Gaps = 41/220 (18%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGV---LADGRAV---AVKRLGDLHQGEE--VFWAEVS 509
E ++ F + LG G G V + L AV AVK L +E +E+
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 510 TIGKI-YHMNLVRMWGFCSEGRHRLLIYEYV--------EKQSLDKHLFSSYF------- 553
+ + H N+V + G C+ G L+I EY ++ L SY
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEE 161
Query: 554 -LGWKERFKVALGTAKGLAYL------HHDEFE----------PKIADFGLAKLSQRGSN 596
L ++ + A+G+A+L H D KI DFGLA+ SN
Sbjct: 162 QLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 221
Query: 597 SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
R +MAPE + T + DV+SYG+++ E+
Sbjct: 222 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 261
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E EV + H N++R++G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY ++ + L + A L+Y H H + +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 139
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + SS+ + + GT Y+ PE KVD++S
Sbjct: 140 PENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 195
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 196 LGVLCYEFLVG 206
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 81/198 (40%), Gaps = 31/198 (15%)
Query: 468 EELGRGGSGAVYK--GVLADGRAVAV----KRLGDL-HQGEEVFWAEVSTIGKIYHMNLV 520
EELG+G V + VLA A+ K+L HQ E E + H N+V
Sbjct: 17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLE---REARICRLLKHPNIV 73
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----H 575
R+ SE H LI++ V L + + + + + + + + H H
Sbjct: 74 RLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVH 133
Query: 576 DEFEP--------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT 621
+P K+ADFGLA + G + F GT GY++PE P
Sbjct: 134 RNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFG-FAGTPGYLSPEVLRKDPYG 191
Query: 622 AKVDVYSYGVVILEMVKG 639
VD+++ GV++ ++ G
Sbjct: 192 KPVDLWACGVILYILLVG 209
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 40/203 (19%)
Query: 469 ELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY---------HMN 518
E+G G G VYK G VA+K + + GEE +ST+ ++ H N
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSV-RVPNGEEGL--PISTVREVALLRRLEAFEHPN 67
Query: 519 LVRMWGFCSEGR-----HRLLIYEYVEKQSLDKHLFSSYFLGWK-ERFKVALGT-AKGLA 571
+VR+ C+ R L++E+V+ Q L +L + G E K + +GL
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLD 126
Query: 572 YLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA 615
+LH H + +P K+ADFGLA++ S + + T Y APE
Sbjct: 127 FLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALAPVVVTLWYRAPEVL 183
Query: 616 SNLPITAKVDVYSYGVVILEMVK 638
VD++S G + EM +
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMFR 206
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 77/191 (40%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E EV + H N++R++G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY ++ + L + A L+Y H H + +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + SS+ + GT Y+ PE KVD++S
Sbjct: 139 PENLLLGSAGELKIADFGWSV----HAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWS 194
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 195 LGVLCYEFLVG 205
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 80/195 (41%), Gaps = 31/195 (15%)
Query: 470 LGRGGSGAVYKGVLADGRA----VAVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVR 521
LG+G G VY LA R +A+K L L + E EV + H N++R
Sbjct: 20 LGKGKFGNVY---LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILR 76
Query: 522 MWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HD 576
++G+ + LI EY ++ + L + A L+Y H H
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHR 136
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVD 625
+ +P KIADFG + + SS+ + GT Y+ PE KVD
Sbjct: 137 DIKPENLLLGSNGELKIADFGWSV----HAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVD 192
Query: 626 VYSYGVVILEMVKGI 640
++S GV+ E + G+
Sbjct: 193 LWSLGVLCYEFLVGM 207
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 98/236 (41%), Gaps = 43/236 (18%)
Query: 435 DVPSSLEEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGV-LADGR----AV 489
D+P++ +Q + LK++ + LG G G VYKG+ + +G V
Sbjct: 13 DIPTTENLYFQGSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV 72
Query: 490 AVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL--------IYEYV 539
A+K L + + + E + + + ++ R+ G C +L+ + +YV
Sbjct: 73 AIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV 132
Query: 540 EKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL------HHD----------EFEPKIA 583
+ ++ S Y L W + AKG+ YL H D KI
Sbjct: 133 REHK--DNIGSQYLLNW------CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKIT 184
Query: 584 DFGLAKLSQRGSNSSQFSQIRGTK--GYMAPEWASNLPITAKVDVYSYGVVILEMV 637
DFGLAKL G+ ++ G +MA E + T + DV+SYGV + E++
Sbjct: 185 DFGLAKL--LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 238
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E EV + H N++R++G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY ++ + L + A L+Y H H + +
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 132
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + SS+ + + GT Y+ PE KVD++S
Sbjct: 133 PENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 188
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 189 LGVLCYEFLVG 199
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 48/228 (21%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVL--ADGRA----VAVKRLGDLHQGEEV--FWAEVS 509
E + + LG G G V K GRA VAVK L + E+ +E +
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLG-------------- 555
+ ++ H ++++++G CS+ LLI EY + SL L S +G
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 556 ----------WKERFKVALGTAKGLAYL------HHDEF----------EPKIADFGLAK 589
+ A ++G+ YL H D + KI+DFGL++
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 590 LSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMV 637
+ + SQ R +MA E + T + DV+S+GV++ E+V
Sbjct: 199 DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 83/213 (38%), Gaps = 46/213 (21%)
Query: 470 LGRGGSGAVYKGVLA-DGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSE 528
LG+G G V K A D R A+K++ + +EV + + H +VR + E
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWLE 73
Query: 529 GRH-------------RLLIYEYVEKQSLDKHLFSSYFLGWKERF-KVALGTAKGLAYLH 574
R+ + EY E ++L + S ++ + ++ + L+Y+H
Sbjct: 74 RRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH 133
Query: 575 -----HDEFEP-----------KIADFGLAKLSQR-------------GSNSSQFSQIRG 605
H +P KI DFGLAK R GS+ + S I G
Sbjct: 134 SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI-G 192
Query: 606 TKGYMAPEWASNL-PITAKVDVYSYGVVILEMV 637
T Y+A E K+D YS G++ E +
Sbjct: 193 TAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 37/140 (26%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG- 639
KIADFG+ K + G + ++ GT Y+APE VD +S+GV++ EM+ G
Sbjct: 159 KIADFGMCKENMLGDAKT--NEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
Query: 640 --------------IRLSN-----WVVEDGEGQEAELKRFVREVKRKI----------LY 670
IR+ N W+ + E ++ +K FVRE ++++ L+
Sbjct: 217 SPFHGQDEEELFHSIRMDNPFYPRWL--EKEAKDLLVKLFVREPEKRLGVRGDIRQHPLF 274
Query: 671 EEEAWIE---EIVDPRLKGK 687
E W E + +DP + K
Sbjct: 275 REINWEELERKEIDPPFRPK 294
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 48/228 (21%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVL--ADGRA----VAVKRLGDLHQGEEV--FWAEVS 509
E + + LG G G V K GRA VAVK L + E+ +E +
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLG-------------- 555
+ ++ H ++++++G CS+ LLI EY + SL L S +G
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 556 ----------WKERFKVALGTAKGLAYL------HHDEF----------EPKIADFGLAK 589
+ A ++G+ YL H D + KI+DFGL++
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 590 LSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMV 637
+ + SQ R +MA E + T + DV+S+GV++ E+V
Sbjct: 199 DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 77/191 (40%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E EV + H N++R++G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY ++ + L + A L+Y H H + +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + SS+ + GT Y+ PE KVD++S
Sbjct: 136 PENLLLGSAGELKIADFGWSV----HAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWS 191
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 192 LGVLCYEFLVG 202
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 30/215 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEE-VFWAEVSTIGKIYHMNLVRMWGF 525
EELG G G V++ V A GR K + + ++ E+S + +++H L+ +
Sbjct: 57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 116
Query: 526 CSEGRHRLLIYEYVEKQSL-DKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ +LI E++ L D+ Y + E +GL ++H H + +
Sbjct: 117 FEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIK 176
Query: 580 P-------------KIADFGLA-KLSQRGSNSSQFSQIR-GTKGYMAPEWASNLPITAKV 624
P KI DFGLA KL N + ++ T + APE P+
Sbjct: 177 PENIMCETKKASSVKIIDFGLATKL-----NPDEIVKVTTATAEFAAPEIVDREPVGFYT 231
Query: 625 DVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKR 659
D+++ GV+ ++ G LS + ED +KR
Sbjct: 232 DMWAIGVLGYVLLSG--LSPFAGEDDLETLQNVKR 264
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 85/203 (41%), Gaps = 37/203 (18%)
Query: 469 ELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY---------HMN 518
E+G G G VYK G VA+K + + G +ST+ ++ H N
Sbjct: 16 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 75
Query: 519 LVRMWGFCSEGR-----HRLLIYEYVEKQSLDKHLFSSYFLGWK-ERFKVALGT-AKGLA 571
+VR+ C+ R L++E+V+ Q L +L + G E K + +GL
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLD 134
Query: 572 YLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA 615
+LH H + +P K+ADFGLA++ S + + T Y APE
Sbjct: 135 FLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALTPVVVTLWYRAPEVL 191
Query: 616 SNLPITAKVDVYSYGVVILEMVK 638
VD++S G + EM +
Sbjct: 192 LQSTYATPVDMWSVGCIFAEMFR 214
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 43/201 (21%)
Query: 470 LGRGGSGAVYKGV-LADGR----AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRM 522
LG G G VYKG+ + +G VA+K L + + + E + + + ++ R+
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 523 WGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL- 573
G C +L+ + +YV + ++ S Y L W + AKG+ YL
Sbjct: 93 LGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNW------CVQIAKGMNYLE 144
Query: 574 -----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK--GYMAPEWAS 616
H D KI DFGLAKL G+ ++ G +MA E
Sbjct: 145 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEGGKVPIKWMALESIL 202
Query: 617 NLPITAKVDVYSYGVVILEMV 637
+ T + DV+SYGV + E++
Sbjct: 203 HRIYTHQSDVWSYGVTVWELM 223
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 78/195 (40%), Gaps = 29/195 (14%)
Query: 469 ELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMWG 524
+LG G G VYK + VA+KR+ H+ E V EVS + ++ H N++ +
Sbjct: 41 KLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKS 100
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
LI+EY E L K++ + + + G+ + H H + +
Sbjct: 101 VIHHNHRLHLIFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLK 159
Query: 580 P----------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-WASNLPITA 622
P KI DFGLA+ G QF+ T Y PE + +
Sbjct: 160 PQNLLLSVSDASETPVLKIGDFGLAR--AFGIPIRQFTHEIITLWYRPPEILLGSRHYST 217
Query: 623 KVDVYSYGVVILEMV 637
VD++S + EM+
Sbjct: 218 SVDIWSIACIWAEML 232
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 43/201 (21%)
Query: 470 LGRGGSGAVYKGV-LADGR----AVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRM 522
LG G G VYKG+ + +G VA+K L + + + E + + + ++ R+
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 523 WGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL- 573
G C +L+ + +YV + ++ S Y L W + AKG+ YL
Sbjct: 77 LGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNW------CVQIAKGMNYLE 128
Query: 574 -----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK--GYMAPEWAS 616
H D KI DFGLAKL G+ ++ G +MA E
Sbjct: 129 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEGGKVPIKWMALESIL 186
Query: 617 NLPITAKVDVYSYGVVILEMV 637
+ T + DV+SYGV + E++
Sbjct: 187 HRIYTHQSDVWSYGVTVWELM 207
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 43/201 (21%)
Query: 470 LGRGGSGAVYKGV-LADGR----AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRM 522
LG G G VYKG+ + +G VA+K L + + + E + + + ++ R+
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 523 WGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL- 573
G C +L+ + +YV + ++ S Y L W + AKG+ YL
Sbjct: 85 LGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNW------CVQIAKGMNYLE 136
Query: 574 -----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK--GYMAPEWAS 616
H D KI DFGLAKL G+ ++ G +MA E
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 617 NLPITAKVDVYSYGVVILEMV 637
+ T + DV+SYGV + E++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELM 215
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 77/191 (40%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E EV + H N++R++G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY ++ + L + A L+Y H H + +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + SS+ + GT Y+ PE KVD++S
Sbjct: 139 PENLLLGSAGELKIADFGWSV----HAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWS 194
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 195 LGVLCYEFLVG 205
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 43/201 (21%)
Query: 470 LGRGGSGAVYKGV-LADGR----AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRM 522
LG G G VYKG+ + +G VA+K L + + + E + + + ++ R+
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 523 WGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL- 573
G C +L+ + +YV + ++ S Y L W + AKG+ YL
Sbjct: 83 LGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNW------CVQIAKGMNYLE 134
Query: 574 -----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK--GYMAPEWAS 616
H D KI DFGLAKL G+ ++ G +MA E
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 617 NLPITAKVDVYSYGVVILEMV 637
+ T + DV+SYGV + E++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELM 213
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+ ++ + E V E+S + ++ H N+V++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HD 576
L++E++ Q L K + +S G +GLA+ H H
Sbjct: 69 DVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKV 624
+ +P K+ADFGLA+ G ++ T Y APE + V
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 625 DVYSYGVVILEMV 637
D++S G + EMV
Sbjct: 186 DIWSLGCIFAEMV 198
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 26/193 (13%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+ ++ + E V E+S + ++ H N+V++
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERF--KVALGTAKGLAYLH-----HD 576
L++E++ Q L K + +S G +GLA+ H H
Sbjct: 68 DVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 126
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAKV 624
+ +P K+ADFGLA+ G ++ T Y APE + V
Sbjct: 127 DLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 184
Query: 625 DVYSYGVVILEMV 637
D++S G + EMV
Sbjct: 185 DIWSLGCIFAEMV 197
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 43/201 (21%)
Query: 470 LGRGGSGAVYKGV-LADGR----AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRM 522
LG G G VYKG+ + +G VA+K L + + + E + + + ++ R+
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 523 WGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL- 573
G C +L+ + +YV + ++ S Y L W + AKG+ YL
Sbjct: 87 LGICLTSTVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNW------CVQIAKGMNYLE 138
Query: 574 -----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK--GYMAPEWAS 616
H D KI DFGLAKL G+ ++ G +MA E
Sbjct: 139 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 617 NLPITAKVDVYSYGVVILEMV 637
+ T + DV+SYGV + E++
Sbjct: 197 HRIYTHQSDVWSYGVTVWELM 217
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 40/203 (19%)
Query: 469 ELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY---------HMN 518
E+G G G VYK G VA+K + + GEE +ST+ ++ H N
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSV-RVPNGEEGL--PISTVREVALLRRLEAFEHPN 67
Query: 519 LVRMWGFCSEGR-----HRLLIYEYVEKQSLDKHLFSSYFLGWK-ERFKVALGT-AKGLA 571
+VR+ C+ R L++E+V+ Q L +L + G E K + +GL
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLD 126
Query: 572 YLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA 615
+LH H + +P K+ADFGLA++ S + T Y APE
Sbjct: 127 FLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALDPVVVTLWYRAPEVL 183
Query: 616 SNLPITAKVDVYSYGVVILEMVK 638
VD++S G + EM +
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMFR 206
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 43/201 (21%)
Query: 470 LGRGGSGAVYKGV-LADGR----AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRM 522
LG G G VYKG+ + +G VA+K L + + + E + + + ++ R+
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 523 WGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL- 573
G C +L+ + +YV + ++ S Y L W + AKG+ YL
Sbjct: 86 LGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNW------CVQIAKGMNYLE 137
Query: 574 -----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK--GYMAPEWAS 616
H D KI DFGLAKL G+ ++ G +MA E
Sbjct: 138 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 617 NLPITAKVDVYSYGVVILEMV 637
+ T + DV+SYGV + E++
Sbjct: 196 HRIYTHQSDVWSYGVTVWELM 216
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 75/177 (42%), Gaps = 38/177 (21%)
Query: 492 KRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHL--- 548
K L DL E+ + IGK H N++ + G C++ +I EY K +L ++L
Sbjct: 75 KDLSDLISEMEM----MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR 128
Query: 549 ------FS-------SYFLGWKERFKVALGTAKGLAYL------HHD----------EFE 579
FS L K+ A A+G+ YL H D +
Sbjct: 129 RPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV 188
Query: 580 PKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
KIADFGLA+ + + R +MAPE + T + DV+S+GV++ E+
Sbjct: 189 MKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 43/201 (21%)
Query: 470 LGRGGSGAVYKGV-LADGR----AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRM 522
LG G G VYKG+ + +G VA+K L + + + E + + + ++ R+
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 523 WGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL- 573
G C +L+ + +YV + ++ S Y L W + AKG+ YL
Sbjct: 89 LGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNW------CVQIAKGMNYLE 140
Query: 574 -----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK--GYMAPEWAS 616
H D KI DFGLAKL G+ ++ G +MA E
Sbjct: 141 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEGGKVPIKWMALESIL 198
Query: 617 NLPITAKVDVYSYGVVILEMV 637
+ T + DV+SYGV + E++
Sbjct: 199 HRIYTHQSDVWSYGVTVWELM 219
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 43/201 (21%)
Query: 470 LGRGGSGAVYKGV-LADGR----AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRM 522
LG G G VYKG+ + +G VA+K L + + + E + + + ++ R+
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 523 WGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL- 573
G C +L+ + +YV + ++ S Y L W + AKG+ YL
Sbjct: 90 LGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNW------CVQIAKGMNYLE 141
Query: 574 -----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK--GYMAPEWAS 616
H D KI DFGLAKL G+ ++ G +MA E
Sbjct: 142 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 617 NLPITAKVDVYSYGVVILEMV 637
+ T + DV+SYGV + E++
Sbjct: 200 HRIYTHQSDVWSYGVTVWELM 220
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 43/201 (21%)
Query: 470 LGRGGSGAVYKGV-LADGR----AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRM 522
LG G G VYKG+ + +G VA+K L + + + E + + + ++ R+
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 523 WGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL- 573
G C +L+ + +YV + ++ S Y L W + AKG+ YL
Sbjct: 86 LGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNW------CVQIAKGMNYLE 137
Query: 574 -----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK--GYMAPEWAS 616
H D KI DFGLAKL G+ ++ G +MA E
Sbjct: 138 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 617 NLPITAKVDVYSYGVVILEMV 637
+ T + DV+SYGV + E++
Sbjct: 196 HRIYTHQSDVWSYGVTVWELM 216
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 43/201 (21%)
Query: 470 LGRGGSGAVYKGV-LADGR----AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRM 522
LG G G VYKG+ + +G VA+K L + + + E + + + ++ R+
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 523 WGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL- 573
G C +L+ + +YV + ++ S Y L W + AKG+ YL
Sbjct: 84 LGICLTSTVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNW------CVQIAKGMNYLE 135
Query: 574 -----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK--GYMAPEWAS 616
H D KI DFGLAKL G+ ++ G +MA E
Sbjct: 136 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 617 NLPITAKVDVYSYGVVILEMV 637
+ T + DV+SYGV + E++
Sbjct: 194 HRIYTHQSDVWSYGVTVWELM 214
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 43/201 (21%)
Query: 470 LGRGGSGAVYKGV-LADGR----AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRM 522
LG G G VYKG+ + +G VA+K L + + + E + + + ++ R+
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 523 WGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL- 573
G C +L+ + +YV + ++ S Y L W + AKG+ YL
Sbjct: 83 LGICLTSTVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNW------CVQIAKGMNYLE 134
Query: 574 -----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK--GYMAPEWAS 616
H D KI DFGLAKL G+ ++ G +MA E
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 617 NLPITAKVDVYSYGVVILEMV 637
+ T + DV+SYGV + E++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELM 213
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 43/201 (21%)
Query: 470 LGRGGSGAVYKGV-LADGR----AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRM 522
LG G G VYKG+ + +G VA+K L + + + E + + + ++ R+
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 523 WGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL- 573
G C +L+ + +YV + ++ S Y L W + AKG+ YL
Sbjct: 85 LGICLTSTVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNW------CVQIAKGMNYLE 136
Query: 574 -----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK--GYMAPEWAS 616
H D KI DFGLAKL G+ ++ G +MA E
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 617 NLPITAKVDVYSYGVVILEMV 637
+ T + DV+SYGV + E++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELM 215
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 43/201 (21%)
Query: 470 LGRGGSGAVYKGV-LADGR----AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRM 522
LG G G VYKG+ + +G VA+K L + + + E + + + ++ R+
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 523 WGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL- 573
G C +L+ + +YV + ++ S Y L W + AKG+ YL
Sbjct: 86 LGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNW------CVQIAKGMNYLE 137
Query: 574 -----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK--GYMAPEWAS 616
H D KI DFGLAKL G+ ++ G +MA E
Sbjct: 138 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 617 NLPITAKVDVYSYGVVILEMV 637
+ T + DV+SYGV + E++
Sbjct: 196 HRIYTHQSDVWSYGVTVWELM 216
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 78/191 (40%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E EV + H N++R++G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY ++ + L + A L+Y H H + +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 137
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIA+FG + + SS+ + + GT Y+ PE KVD++S
Sbjct: 138 PENLLLGSAGELKIANFGWSV----HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 193
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 194 LGVLCYEFLVG 204
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 43/201 (21%)
Query: 470 LGRGGSGAVYKGV-LADGR----AVAVKRLGDLH--QGEEVFWAEVSTIGKIYHMNLVRM 522
LG G G VYKG+ + +G VA+K L + + + E + + + ++ R+
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 523 WGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL- 573
G C +L+ + +YV + ++ S Y L W + AKG+ YL
Sbjct: 83 LGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNW------CVQIAKGMNYLE 134
Query: 574 -----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK--GYMAPEWAS 616
H D KI DFGLAKL G+ ++ G +MA E
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 617 NLPITAKVDVYSYGVVILEMV 637
+ T + DV+SYGV + E++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELM 213
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 43/201 (21%)
Query: 470 LGRGGSGAVYKGV-LADGR----AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRM 522
LG G G VYKG+ + +G VA+K L + + + E + + + ++ R+
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 523 WGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL- 573
G C +L+ + +YV + ++ S Y L W + AKG+ YL
Sbjct: 83 LGICLTSTVQLITQLMPFGXLLDYVREHK--DNIGSQYLLNW------CVQIAKGMNYLE 134
Query: 574 -----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK--GYMAPEWAS 616
H D KI DFGLAKL G+ ++ G +MA E
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 617 NLPITAKVDVYSYGVVILEMV 637
+ T + DV+SYGV + E++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELM 213
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 43/201 (21%)
Query: 470 LGRGGSGAVYKGV-LADGR----AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRM 522
LG G G VYKG+ + +G VA+K L + + + E + + + ++ R+
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 523 WGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL- 573
G C +L+ + +YV + ++ S Y L W + AKG+ YL
Sbjct: 86 LGICLTSTVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNW------CVQIAKGMNYLE 137
Query: 574 -----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK--GYMAPEWAS 616
H D KI DFGLAKL G+ ++ G +MA E
Sbjct: 138 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 617 NLPITAKVDVYSYGVVILEMV 637
+ T + DV+SYGV + E++
Sbjct: 196 HRIYTHQSDVWSYGVTVWELM 216
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 28/194 (14%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 524 GFCSEGRHRLLIYEYVE---KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----H 575
L++E++ K +D + L + + L +GLA+ H H
Sbjct: 71 DVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHRVLH 128
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAK 623
+ +P K+ADFGLA+ G + T Y APE +
Sbjct: 129 RDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 186
Query: 624 VDVYSYGVVILEMV 637
VD++S G + EMV
Sbjct: 187 VDIWSLGCIFAEMV 200
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 28/194 (14%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 524 GFCSEGRHRLLIYEYVE---KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----H 575
L++E++ K +D + L + + L +GLA+ H H
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHRVLH 126
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAK 623
+ +P K+ADFGLA+ G + T Y APE +
Sbjct: 127 RDLKPENLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 184
Query: 624 VDVYSYGVVILEMV 637
VD++S G + EMV
Sbjct: 185 VDIWSLGCIFAEMV 198
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 28/194 (14%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 524 GFCSEGRHRLLIYEYVE---KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----H 575
L++E++ K +D + L + + L +GLA+ H H
Sbjct: 72 DVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHRVLH 129
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAK 623
+ +P K+ADFGLA+ G + T Y APE +
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 187
Query: 624 VDVYSYGVVILEMV 637
VD++S G + EMV
Sbjct: 188 VDIWSLGCIFAEMV 201
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 28/194 (14%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLVRMW 523
E++G G G VYK G VA+K++ + E V E+S + ++ H N+V++
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 524 GFCSEGRHRLLIYEYVE---KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----H 575
L++E++ K +D + L + + L +GLA+ H H
Sbjct: 72 DVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHRVLH 129
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP-ITAK 623
+ +P K+ADFGLA+ G + T Y APE +
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 187
Query: 624 VDVYSYGVVILEMV 637
VD++S G + EMV
Sbjct: 188 VDIWSLGCIFAEMV 201
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 48/228 (21%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVL--ADGRA----VAVKRLGDLHQGEEV--FWAEVS 509
E + + LG G G V K GRA VAVK L + E+ +E +
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 510 TIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLG-------------- 555
+ ++ H ++++++G CS+ LLI EY + SL L S +G
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 556 ----------WKERFKVALGTAKGLAYL------HHDEF----------EPKIADFGLAK 589
+ A ++G+ YL H D + KI+DFGL++
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 590 LSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMV 637
+ + SQ R +MA E + T + DV+S+GV++ E+V
Sbjct: 199 DVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 43/201 (21%)
Query: 470 LGRGGSGAVYKGV-LADGR----AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRM 522
LG G G VYKG+ + +G VA+K L + + + E + + + ++ R+
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 523 WGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL- 573
G C +L+ + +YV + ++ S Y L W + AKG+ YL
Sbjct: 84 LGICLTSTVQLIMQLMPFGXLLDYVREHK--DNIGSQYLLNW------CVQIAKGMNYLE 135
Query: 574 -----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK--GYMAPEWAS 616
H D KI DFGLAKL G+ ++ G +MA E
Sbjct: 136 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 617 NLPITAKVDVYSYGVVILEMV 637
+ T + DV+SYGV + E++
Sbjct: 194 HRIYTHQSDVWSYGVTVWELM 214
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 90/222 (40%), Gaps = 43/222 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVY--------KGVLADGRAVAVKRLGDLHQGEEV--FWAE 507
E + + + LG G G V K + VAVK L D E++ +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSE 90
Query: 508 VSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS--------SYFLG--- 555
+ + I H N++ + G C++ +I EY K +L ++L + SY +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 556 -----WKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRG 594
+K+ A+G+ YL H D KIADFGLA+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ + R +MAPE + T + DV+S+GV++ E+
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 92/237 (38%), Gaps = 51/237 (21%)
Query: 451 FRRFSYA---ELKKSTKSFKEELGRGGSGAVYK----GVLADGRA--VAVKRLGDLHQG- 500
FR + Y E + F + LG G G V G+ G + VAVK L +
Sbjct: 31 FREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSS 90
Query: 501 -EEVFWAEVSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYV-------------EKQSLD 545
E +E+ + ++ H N+V + G C+ LI+EY EK S D
Sbjct: 91 EREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSED 150
Query: 546 KHLFSSY----------FLGWKERFKVALGTAKGLAYLH-----HDEFEP---------- 580
+ + + L +++ A AKG+ +L H +
Sbjct: 151 EIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKV 210
Query: 581 -KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
KI DFGLA+ SN R +MAPE T K DV+SYG+++ E+
Sbjct: 211 VKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEI 267
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 94/242 (38%), Gaps = 48/242 (19%)
Query: 429 LLFRRQDVPSSLEEGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGV-LADGR 487
LL R+ V G + R E KK + LG G G VYKG+ + +G
Sbjct: 21 LLQERELVEPLTPSGEAPNQALLRILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGE 75
Query: 488 AVAVK------RLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL------- 534
V + R + + E + + + ++ R+ G C +L+
Sbjct: 76 KVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFG 135
Query: 535 -IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL------HHD----------E 577
+ +YV + ++ S Y L W + AKG+ YL H D
Sbjct: 136 CLLDYVREHK--DNIGSQYLLNW------CVQIAKGMNYLEDRRLVHRDLAARNVLVKTP 187
Query: 578 FEPKIADFGLAKLSQRGSNSSQFSQIRGTK--GYMAPEWASNLPITAKVDVYSYGVVILE 635
KI DFGLAKL G+ ++ G +MA E + T + DV+SYGV + E
Sbjct: 188 QHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWE 245
Query: 636 MV 637
++
Sbjct: 246 LM 247
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 78/191 (40%), Gaps = 25/191 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E EV + H N++R++G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + LI EY ++ + L + A L+Y H H + +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIA+FG + + SS+ + + GT Y+ PE KVD++S
Sbjct: 139 PENLLLGSAGELKIANFGWSV----HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 194
Query: 629 YGVVILEMVKG 639
GV+ E + G
Sbjct: 195 LGVLCYEFLVG 205
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 81/198 (40%), Gaps = 31/198 (15%)
Query: 468 EELGRGGSGAVYKGVLAD------GRAVAVKRLGDL-HQGEEVFWAEVSTIGKIYHMNLV 520
EELG+G V + V + + K+L HQ E E + H N+V
Sbjct: 37 EELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLE---REARICRLLKHPNIV 93
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----H 575
R+ SE L+++ V L + + + + + + + ++H H
Sbjct: 94 RLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVH 153
Query: 576 DEFEP--------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT 621
+ +P K+ADFGLA + +G + F GT GY++PE P
Sbjct: 154 RDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFG-FAGTPGYLSPEVLRKDPYG 211
Query: 622 AKVDVYSYGVVILEMVKG 639
VD+++ GV++ ++ G
Sbjct: 212 KPVDIWACGVILYILLVG 229
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 37/140 (26%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG- 639
KIADFG+ K + G + + GT Y+APE VD +S+GV++ EM+ G
Sbjct: 158 KIADFGMCKENMLGDAKT--NXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
Query: 640 --------------IRLSN-----WVVEDGEGQEAELKRFVREVKRKI----------LY 670
IR+ N W+ + E ++ +K FVRE ++++ L+
Sbjct: 216 SPFHGQDEEELFHSIRMDNPFYPRWL--EKEAKDLLVKLFVREPEKRLGVRGDIRQHPLF 273
Query: 671 EEEAWIE---EIVDPRLKGK 687
E W E + +DP + K
Sbjct: 274 REINWEELERKEIDPPFRPK 293
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 43/222 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVY--------KGVLADGRAVAVKRLGDLHQGEEV--FWAE 507
E + + + LG G G V K + VAVK L D +++ +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 508 VSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS--------SYFLG--- 555
+ + I H N++ + G C++ +I EY K +L ++L + SY +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 556 -----WKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRG 594
+K+ A+G+ YL H D KIADFGLA+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ + R +MAPE + T + DV+S+GV++ E+
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 79/193 (40%), Gaps = 27/193 (13%)
Query: 470 LGRGGSGAVYKGVLAD------GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
LG+GG Y+ D G+ V L HQ E++ E++ + + ++V
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKM-STEIAIHKSLDNPHVVGFH 92
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH-------- 575
GF + ++ E ++SL + + E T +G+ YLH+
Sbjct: 93 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 152
Query: 576 --------DEFEPKIADFGLA-KLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDV 626
D+ + KI DFGLA K+ G GT Y+APE + +VD+
Sbjct: 153 KLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC---GTPNYIAPEVLCKKGHSFEVDI 209
Query: 627 YSYGVVILEMVKG 639
+S G ++ ++ G
Sbjct: 210 WSLGCILYTLLVG 222
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 43/222 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVY--------KGVLADGRAVAVKRLGDLHQGEEV--FWAE 507
E + + + LG G G V K + VAVK L D +++ +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 508 VSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS--------SYFLG--- 555
+ + I H N++ + G C++ +I EY K +L ++L + SY +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVP 150
Query: 556 -----WKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRG 594
+K+ A+G+ YL H D KIADFGLA+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ + R +MAPE + T + DV+S+GV++ E+
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVF---WAEVSTIGKIYHMNLVRMWG 524
E++G+G G V+KG+ + V ++ DL + E+ E++ + + + + +G
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 525 FCSEGRHRLLIYEYVEKQS-LDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----- 578
+ +I EY+ S LD L L + + KGL YLH ++
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALD--LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDI 150
Query: 579 -----------EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVY 627
E K+ADFG+A Q + + GT +MAPE +K D++
Sbjct: 151 KAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIW 208
Query: 628 SYGVVILEMVKG 639
S G+ +E+ +G
Sbjct: 209 SLGITAIELARG 220
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 76/177 (42%), Gaps = 38/177 (21%)
Query: 492 KRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS- 550
K L DL E+ + IGK H N++ + G C++ +I EY K +L ++L +
Sbjct: 116 KDLSDLISEMEM----MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR 169
Query: 551 -------SYF--------LGWKERFKVALGTAKGLAYL------HHD----------EFE 579
SY L K+ A A+G+ YL H D +
Sbjct: 170 RPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV 229
Query: 580 PKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
KIADFGLA+ + + R +MAPE + T + DV+S+GV++ E+
Sbjct: 230 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 286
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVF---WAEVSTIGKIYHMNLVRMWG 524
E++G+G G V+KG+ + V ++ DL + E+ E++ + + + + +G
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 525 FCSEGRHRLLIYEYVEKQS-LDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----- 578
+ +I EY+ S LD L L + + KGL YLH ++
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALD--LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDI 130
Query: 579 -----------EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVY 627
E K+ADFG+A Q + + GT +MAPE +K D++
Sbjct: 131 KAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIW 188
Query: 628 SYGVVILEMVKG 639
S G+ +E+ +G
Sbjct: 189 SLGITAIELARG 200
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 40/203 (19%)
Query: 469 ELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIY---------HMN 518
E+G G G VYK G VA+K + + GEE +ST+ ++ H N
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSV-RVPNGEEGL--PISTVREVALLRRLEAFEHPN 67
Query: 519 LVRMWGFCSEGR-----HRLLIYEYVEKQSLDKHLFSSYFLGWK-ERFKVALGT-AKGLA 571
+VR+ C+ R L++E+V+ Q L +L + G E K + +GL
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLD 126
Query: 572 YLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA 615
+LH H + +P K+ADFGLA++ S + T Y APE
Sbjct: 127 FLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALFPVVVTLWYRAPEVL 183
Query: 616 SNLPITAKVDVYSYGVVILEMVK 638
VD++S G + EM +
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMFR 206
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVF---WAEVSTIGKIYHMNLVRMWG 524
E++G+G G V+KG+ + V ++ DL + E+ E++ + + + + +G
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 525 FCSEGRHRLLIYEYVEKQS-LDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----- 578
+ +I EY+ S LD L L + + KGL YLH ++
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALD--LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDI 145
Query: 579 -----------EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVY 627
E K+ADFG+A Q + + GT +MAPE +K D++
Sbjct: 146 KAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIW 203
Query: 628 SYGVVILEMVKG 639
S G+ +E+ +G
Sbjct: 204 SLGITAIELARG 215
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 76/177 (42%), Gaps = 38/177 (21%)
Query: 492 KRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS- 550
K L DL E+ + IGK H N++ + G C++ +I EY K +L ++L +
Sbjct: 68 KDLSDLISEMEM----MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR 121
Query: 551 -------SYF--------LGWKERFKVALGTAKGLAYL------HHD----------EFE 579
SY L K+ A A+G+ YL H D +
Sbjct: 122 RPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV 181
Query: 580 PKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
KIADFGLA+ + + R +MAPE + T + DV+S+GV++ E+
Sbjct: 182 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 238
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVF---WAEVSTIGKIYHMNLVRMWG 524
E++G+G G V+KG+ + V ++ DL + E+ E++ + + + + +G
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 525 FCSEGRHRLLIYEYVEKQS-LDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEF----- 578
+ +I EY+ S LD L L + + KGL YLH ++
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALD--LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDI 130
Query: 579 -----------EPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVY 627
E K+ADFG+A Q + + GT +MAPE +K D++
Sbjct: 131 KAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIW 188
Query: 628 SYGVVILEMVKG 639
S G+ +E+ +G
Sbjct: 189 SLGITAIELARG 200
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 76/177 (42%), Gaps = 38/177 (21%)
Query: 492 KRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS- 550
K L DL E+ + IGK H N++ + G C++ +I EY K +L ++L +
Sbjct: 64 KDLSDLISEMEM----MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR 117
Query: 551 -------SYF--------LGWKERFKVALGTAKGLAYL------HHD----------EFE 579
SY L K+ A A+G+ YL H D +
Sbjct: 118 RPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV 177
Query: 580 PKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
KIADFGLA+ + + R +MAPE + T + DV+S+GV++ E+
Sbjct: 178 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 234
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 76/177 (42%), Gaps = 38/177 (21%)
Query: 492 KRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS- 550
K L DL E+ + IGK H N++ + G C++ +I EY K +L ++L +
Sbjct: 67 KDLSDLISEMEM----MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR 120
Query: 551 -------SYF--------LGWKERFKVALGTAKGLAYL------HHD----------EFE 579
SY L K+ A A+G+ YL H D +
Sbjct: 121 RPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV 180
Query: 580 PKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
KIADFGLA+ + + R +MAPE + T + DV+S+GV++ E+
Sbjct: 181 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 237
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 76/177 (42%), Gaps = 38/177 (21%)
Query: 492 KRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS- 550
K L DL E+ + IGK H N++ + G C++ +I EY K +L ++L +
Sbjct: 75 KDLSDLISEMEM----MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR 128
Query: 551 -------SYF--------LGWKERFKVALGTAKGLAYL------HHD----------EFE 579
SY L K+ A A+G+ YL H D +
Sbjct: 129 EPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV 188
Query: 580 PKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
KIADFGLA+ + + R +MAPE + T + DV+S+GV++ E+
Sbjct: 189 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 76/177 (42%), Gaps = 38/177 (21%)
Query: 492 KRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS- 550
K L DL E+ + IGK H N++ + G C++ +I EY K +L ++L +
Sbjct: 75 KDLSDLISEMEM----MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR 128
Query: 551 -------SYF--------LGWKERFKVALGTAKGLAYL------HHD----------EFE 579
SY L K+ A A+G+ YL H D +
Sbjct: 129 RPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV 188
Query: 580 PKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
KIADFGLA+ + + R +MAPE + T + DV+S+GV++ E+
Sbjct: 189 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 38/177 (21%)
Query: 492 KRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS 551
K L DL E+ + IGK H N++ + G C++ +I EY K +L ++L +
Sbjct: 60 KDLSDLISEMEM----MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR 113
Query: 552 YFLGW----------------KERFKVALGTAKGLAYL------HHD----------EFE 579
G K+ A A+G+ YL H D +
Sbjct: 114 RPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV 173
Query: 580 PKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
KIADFGLA+ + + R +MAPE + T + DV+S+GV++ E+
Sbjct: 174 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 230
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 38/177 (21%)
Query: 492 KRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSS 551
K L DL E+ + IGK H N++ + G C++ +I EY K +L ++L +
Sbjct: 75 KDLSDLISEMEM----MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR 128
Query: 552 YFLGW----------------KERFKVALGTAKGLAYL------HHD----------EFE 579
G K+ A A+G+ YL H D +
Sbjct: 129 RPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV 188
Query: 580 PKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
KIADFGLA+ + + R +MAPE + T + DV+S+GV++ E+
Sbjct: 189 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 581 KIADFGLAKLSQR-GSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
KIADFG+ K G + +F GT Y+APE + P VD ++YGV++ EM+ G
Sbjct: 160 KIADFGMCKEHMMDGVTTREFC---GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAG 216
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 79/193 (40%), Gaps = 27/193 (13%)
Query: 470 LGRGGSGAVYKGVLAD------GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
LG+GG Y+ D G+ V L HQ E++ E++ + + ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKM-STEIAIHKSLDNPHVVGFH 108
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH-------- 575
GF + ++ E ++SL + + E T +G+ YLH+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 168
Query: 576 --------DEFEPKIADFGLA-KLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDV 626
D+ + KI DFGLA K+ G GT Y+APE + +VD+
Sbjct: 169 KLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC---GTPNYIAPEVLCKKGHSFEVDI 225
Query: 627 YSYGVVILEMVKG 639
+S G ++ ++ G
Sbjct: 226 WSLGCILYTLLVG 238
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 90/211 (42%), Gaps = 53/211 (25%)
Query: 470 LGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSE 528
LG G SG V GR VAVKR+ L ++ E+ + + H N++R + CSE
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRM--LIDFCDIALMEIKLLTESDDHPNVIRYY--CSE 78
Query: 529 GRHRLLIYEYVEKQSLD-------KHLFSSYFLGWKERFKVAL--GTAKGLAYLH----- 574
R L Y +E +L+ K++ KE ++L A G+A+LH
Sbjct: 79 TTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKII 137
Query: 575 HDEFEPK------------------------IADFGLAKLSQRGSNS--SQFSQIRGTKG 608
H + +P+ I+DFGL K G +S + + GT G
Sbjct: 138 HRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSG 197
Query: 609 YMAPEW---ASNLP----ITAKVDVYSYGVV 632
+ APE ++NL +T +D++S G V
Sbjct: 198 WRAPELLEESNNLQTKRRLTRSIDIFSMGCV 228
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 84/187 (44%), Gaps = 40/187 (21%)
Query: 484 ADGRAVAVKRL--GDLHQGE-EVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL--IYEY 538
+DG+ + K L G + + E ++ +EV+ + ++ H N+VR + + + L + EY
Sbjct: 29 SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEY 88
Query: 539 VE--------------KQSLDKH----LFSSYFLGWKERFKVALGTAKGLAYLHHDEFEP 580
E +Q LD+ + + L KE + + G G LH D +P
Sbjct: 89 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG---GHTVLHRD-LKP 144
Query: 581 -----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSY 629
K+ DFGLA++ + ++ + GT YM+PE + + K D++S
Sbjct: 145 ANVFLDGKQNVKLGDFGLARILNHDEDFAK--EFVGTPYYMSPEQMNRMSYNEKSDIWSL 202
Query: 630 GVVILEM 636
G ++ E+
Sbjct: 203 GCLLYEL 209
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 30/198 (15%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVK-------RLGDLHQGEEVFWAEVSTIGKIYHM 517
+E LG G G V + VA+K + D+H E E+S + + H
Sbjct: 13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVE---REISYLKLLRHP 69
Query: 518 NLVRMWGFCSEGRHRLLIYEY---------VEKQSLDKHLFSSYF------LGWKERFKV 562
++++++ + +++ EY VEK+ + + +F + + R K+
Sbjct: 70 HIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKI 129
Query: 563 ALGTAKGLAYLHHDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS-NLPIT 621
K L D KIADFGL+ + G+ G+ Y APE + L
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEVINGKLYAG 186
Query: 622 AKVDVYSYGVVILEMVKG 639
+VDV+S G+V+ M+ G
Sbjct: 187 PEVDVWSCGIVLYVMLVG 204
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 79/193 (40%), Gaps = 27/193 (13%)
Query: 470 LGRGGSGAVYKGVLAD------GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
LG+GG Y+ D G+ V L HQ E++ E++ + + ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKM-STEIAIHKSLDNPHVVGFH 108
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH-------- 575
GF + ++ E ++SL + + E T +G+ YLH+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 168
Query: 576 --------DEFEPKIADFGLA-KLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDV 626
D+ + KI DFGLA K+ G GT Y+APE + +VD+
Sbjct: 169 KLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLC---GTPNYIAPEVLCKKGHSFEVDI 225
Query: 627 YSYGVVILEMVKG 639
+S G ++ ++ G
Sbjct: 226 WSLGCILYTLLVG 238
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 43/201 (21%)
Query: 470 LGRGGSGAVYKGV-LADGR----AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRM 522
LG G G VYKG+ + +G VA+K L + + + E + + + ++ R+
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 523 WGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL- 573
G C +L+ + +YV + ++ S Y L W + A+G+ YL
Sbjct: 80 LGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNW------CVQIAEGMNYLE 131
Query: 574 -----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK--GYMAPEWAS 616
H D KI DFGLAKL G+ ++ G +MA E
Sbjct: 132 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEGGKVPIKWMALESIL 189
Query: 617 NLPITAKVDVYSYGVVILEMV 637
+ T + DV+SYGV + E++
Sbjct: 190 HRIYTHQSDVWSYGVTVWELM 210
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 79/193 (40%), Gaps = 27/193 (13%)
Query: 470 LGRGGSGAVYKGVLAD------GRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
LG+GG Y+ D G+ V L HQ E++ E++ + + ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKM-STEIAIHKSLDNPHVVGFH 108
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHH-------- 575
GF + ++ E ++SL + + E T +G+ YLH+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 168
Query: 576 --------DEFEPKIADFGLA-KLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDV 626
D+ + KI DFGLA K+ G GT Y+APE + +VD+
Sbjct: 169 KLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLC---GTPNYIAPEVLCKKGHSFEVDI 225
Query: 627 YSYGVVILEMVKG 639
+S G ++ ++ G
Sbjct: 226 WSLGCILYTLLVG 238
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 22/204 (10%)
Query: 456 YAELKKSTKSFKEELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEV--FWAEVSTIG 512
Y EL K + E +G GG V + G VA+K + G ++ E+ +
Sbjct: 5 YDELLKYYE-LHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALK 63
Query: 513 KIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAY 572
+ H ++ +++ ++ EY L ++ S L +E V +AY
Sbjct: 64 NLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAY 123
Query: 573 LH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
+H H + +P K+ DFGL +G+ G+ Y APE
Sbjct: 124 VHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPELIQ 182
Query: 617 NLP-ITAKVDVYSYGVVILEMVKG 639
+ ++ DV+S G+++ ++ G
Sbjct: 183 GKSYLGSEADVWSMGILLYVLMCG 206
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 74/192 (38%), Gaps = 27/192 (14%)
Query: 470 LGRGGSGAVYKGVLA----DGRAVAVKRLGDLHQG---EEVFWAEVSTIGKIYHMNLVRM 522
L + G G+ K +L DGR +K + E EV+ + + H N+V+
Sbjct: 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQY 88
Query: 523 WGFCSEGRHRLLIYEYVEKQSLDKHLFSS--------YFLGWKERFKVALGTAKGLAYLH 574
E ++ +Y E L K + + L W + +AL LH
Sbjct: 89 RESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILH 148
Query: 575 HD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
D + ++ DFG+A++ S GT Y++PE N P K
Sbjct: 149 RDIKSQNIFLTKDGTVQLGDFGIARV--LNSTVELARACIGTPYYLSPEICENKPYNNKS 206
Query: 625 DVYSYGVVILEM 636
D+++ G V+ E+
Sbjct: 207 DIWALGCVLYEL 218
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 84/194 (43%), Gaps = 26/194 (13%)
Query: 468 EELGRGGSGAVYKGV--LADGRAVAVKRLGDLHQGEEVFWA--EVSTIGKIYHMNLVRMW 523
++LG G VYKG L D VA+K + H+ A EVS + + H N+V +
Sbjct: 8 DKLGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH 66
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVAL-GTAKGLAYLH-----HDE 577
+ L++EY++K L ++L + K+ L +GLAY H H +
Sbjct: 67 DIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRD 125
Query: 578 FEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-WASNLPITAKVD 625
+P K+ADFGLA+ + + + T Y P+ + + ++D
Sbjct: 126 LKPQNLLINERGELKLADFGLAR--AKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQID 183
Query: 626 VYSYGVVILEMVKG 639
++ G + EM G
Sbjct: 184 MWGVGCIFYEMATG 197
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 69/163 (42%), Gaps = 23/163 (14%)
Query: 496 DLHQGEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLG 555
++ + E + E+S + + H N+++++ + ++ L+ E+ E L + + + +
Sbjct: 85 NIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFD 144
Query: 556 WKERFKVALGTAKGLAYLH-----HDEFEP--------------KIADFGLAKLSQRGSN 596
+ + G+ YLH H + +P KI DFGL+ S
Sbjct: 145 ECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF---SK 201
Query: 597 SSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
+ GT Y+APE K DV+S GV++ ++ G
Sbjct: 202 DYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCG 243
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 83/200 (41%), Gaps = 33/200 (16%)
Query: 465 SFKEELGRGGSGAVYKGVLAD---GRAVAVKRLGDLHQGEEVFWAE-VSTIGKIYHMNLV 520
+ + LGRG G V++ + D G AVK++ EVF E + + +V
Sbjct: 75 THQPRLGRGSFGEVHR--MKDKQTGFQCAVKKVR-----LEVFRVEELVACAGLSSPRIV 127
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTA-KGLAYLH----- 574
++G EG + E +E SL + L ++R LG A +GL YLH
Sbjct: 128 PLYGAVREGPWVNIFMELLEGGSLGQ-LIKQMGCLPEDRALYYLGQALEGLEYLHTRRIL 186
Query: 575 ------------HDEFEPKIADFGLAKLSQR---GSNSSQFSQIRGTKGYMAPEWASNLP 619
D + DFG A Q G + I GT+ +MAPE P
Sbjct: 187 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 246
Query: 620 ITAKVDVYSYGVVILEMVKG 639
AKVD++S ++L M+ G
Sbjct: 247 CDAKVDIWSSCCMMLHMLNG 266
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 78/202 (38%), Gaps = 23/202 (11%)
Query: 459 LKKSTKSFKEELGRGGSGAVYKGV-LADGR------AVAVKRLGDLHQGEEVFWAEVSTI 511
LK++ + LG G G VYKG+ + DG A+ V R + + E +
Sbjct: 14 LKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVM 73
Query: 512 GKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLA 571
+ + R+ G C +L+ LD + LG ++ + AKG++
Sbjct: 74 AGVGSPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMS 133
Query: 572 YL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA 615
YL H D KI DFGLA+L + +MA E
Sbjct: 134 YLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESI 193
Query: 616 SNLPITAKVDVYSYGVVILEMV 637
T + DV+SYGV + E++
Sbjct: 194 LRRRFTHQSDVWSYGVTVWELM 215
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 43/201 (21%)
Query: 470 LGRGGSGAVYKGV-LADGR----AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRM 522
L G G VYKG+ + +G VA+K L + + + E + + + ++ R+
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 523 WGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL- 573
G C +L+ + +YV + ++ S Y L W + AKG+ YL
Sbjct: 83 LGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNW------CVQIAKGMNYLE 134
Query: 574 -----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK--GYMAPEWAS 616
H D KI DFGLAKL G+ ++ G +MA E
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 617 NLPITAKVDVYSYGVVILEMV 637
+ T + DV+SYGV + E++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELM 213
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 43/222 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVY--------KGVLADGRAVAVKRLGDLHQGEEV--FWAE 507
E + + + LG G G V K + VAVK L D +++ +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 508 VSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS--------SYFLG--- 555
+ + I H N++ + G C++ +I EY K +L ++L + SY +
Sbjct: 91 MEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 556 -----WKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRG 594
+K+ A+G+ YL H D KIADFGLA+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ + R +MAPE + T + DV+S+GV++ E+
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 83/187 (44%), Gaps = 40/187 (21%)
Query: 484 ADGRAVAVKRL--GDLHQGE-EVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL--IYEY 538
+DG+ + K L G + + E ++ +EV+ + ++ H N+VR + + + L + EY
Sbjct: 29 SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEY 88
Query: 539 VE--------------KQSLDKH----LFSSYFLGWKERFKVALGTAKGLAYLHHDEFEP 580
E +Q LD+ + + L KE + + G G LH D +P
Sbjct: 89 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG---GHTVLHRD-LKP 144
Query: 581 -----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSY 629
K+ DFGLA++ ++S GT YM+PE + + K D++S
Sbjct: 145 ANVFLDGKQNVKLGDFGLARIL--NHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSL 202
Query: 630 GVVILEM 636
G ++ E+
Sbjct: 203 GCLLYEL 209
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 43/201 (21%)
Query: 470 LGRGGSGAVYKGV-LADGR----AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRM 522
L G G VYKG+ + +G VA+K L + + + E + + + ++ R+
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 523 WGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL- 573
G C +L+ + +YV + ++ S Y L W + AKG+ YL
Sbjct: 90 LGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNW------CVQIAKGMNYLE 141
Query: 574 -----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK--GYMAPEWAS 616
H D KI DFGLAKL G+ ++ G +MA E
Sbjct: 142 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 617 NLPITAKVDVYSYGVVILEMV 637
+ T + DV+SYGV + E++
Sbjct: 200 HRIYTHQSDVWSYGVTVWELM 220
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 82/195 (42%), Gaps = 30/195 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y +L R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIH 149
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ + S + T+ Y APE + V
Sbjct: 150 RDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 625 DVYSYGVVILEMVKG 639
D++S GV++ EM+KG
Sbjct: 207 DIWSVGVIMGEMIKG 221
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 24/192 (12%)
Query: 468 EELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVF---WAEVSTIGKIYHMNLVRMWG 524
+ +G+G G VYKG+ + V ++ DL + E+ E++ + + + R +G
Sbjct: 25 DRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 525 FCSEGRHRLLIYEYVEKQS-LDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD------- 576
+ +I EY+ S LD L L + KGL YLH +
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALD--LLKPGPLEETYIATILREILKGLDYLHSERKIHRDI 142
Query: 577 ---------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVY 627
+ + K+ADFG+A Q + + GT +MAPE K D++
Sbjct: 143 KAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIW 200
Query: 628 SYGVVILEMVKG 639
S G+ +E+ KG
Sbjct: 201 SLGITAIELAKG 212
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 43/201 (21%)
Query: 470 LGRGGSGAVYKGV-LADGR----AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRM 522
L G G VYKG+ + +G VA+K L + + + E + + + ++ R+
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 523 WGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL- 573
G C +L+ + +YV + ++ S Y L W + AKG+ YL
Sbjct: 90 LGICLTSTVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNW------CVQIAKGMNYLE 141
Query: 574 -----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK--GYMAPEWAS 616
H D KI DFGLAKL G+ ++ G +MA E
Sbjct: 142 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 617 NLPITAKVDVYSYGVVILEMV 637
+ T + DV+SYGV + E++
Sbjct: 200 HRIYTHQSDVWSYGVTVWELM 220
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 82/195 (42%), Gaps = 30/195 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y +L R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 32 IGSGAQGIVVAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIH 149
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ + S + T+ Y APE + V
Sbjct: 150 RDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 625 DVYSYGVVILEMVKG 639
D++S GV++ EM+KG
Sbjct: 207 DIWSVGVIMGEMIKG 221
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 89/222 (40%), Gaps = 43/222 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVY--------KGVLADGRAVAVKRLGDLHQGEEV--FWAE 507
E + + + LG G G V K + VAVK L D +++ +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 508 VSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS--------SYFLG--- 555
+ + I H N++ + G C++ +I EY K +L ++L + SY +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 556 -----WKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRG 594
+K+ A+G+ YL H D KIADFGLA+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ R +MAPE + T + DV+S+GV++ E+
Sbjct: 211 DYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 83/187 (44%), Gaps = 40/187 (21%)
Query: 484 ADGRAVAVKRL--GDLHQGE-EVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLL--IYEY 538
+DG+ + K L G + + E ++ +EV+ + ++ H N+VR + + + L + EY
Sbjct: 29 SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEY 88
Query: 539 VE--------------KQSLDKH----LFSSYFLGWKERFKVALGTAKGLAYLHHDEFEP 580
E +Q LD+ + + L KE + + G G LH D +P
Sbjct: 89 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG---GHTVLHRD-LKP 144
Query: 581 -----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSY 629
K+ DFGLA++ ++S GT YM+PE + + K D++S
Sbjct: 145 ANVFLDGKQNVKLGDFGLARIL--NHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSL 202
Query: 630 GVVILEM 636
G ++ E+
Sbjct: 203 GCLLYEL 209
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 22/151 (14%)
Query: 507 EVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGT 566
E+ + H ++++++ S ++ EYV L ++ + L KE ++
Sbjct: 66 EIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQI 125
Query: 567 AKGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIR-GTKGY 609
G+ Y H H + +P KIADFGL+ + G +F + G+ Y
Sbjct: 126 LSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG----EFLRXSCGSPNY 181
Query: 610 MAPEWAS-NLPITAKVDVYSYGVVILEMVKG 639
APE S L +VD++S GV++ ++ G
Sbjct: 182 AAPEVISGRLYAGPEVDIWSSGVILYALLCG 212
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 43/201 (21%)
Query: 470 LGRGGSGAVYKGV-LADGR----AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRM 522
LG G G VYKG+ + +G VA+K L + + + E + + + ++ R+
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 523 WGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL- 573
G C +L+ + +YV + ++ S Y L W + AKG+ YL
Sbjct: 83 LGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNW------CVQIAKGMNYLE 134
Query: 574 -----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK--GYMAPEWAS 616
H D KI DFG AKL G+ ++ G +MA E
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGRAKL--LGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 617 NLPITAKVDVYSYGVVILEMV 637
+ T + DV+SYGV + E++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELM 213
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 43/222 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVY--------KGVLADGRAVAVKRLGDLHQGEEV--FWAE 507
E + + + LG G G V K + VAVK L D +++ +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 508 VSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS--------SYFLG--- 555
+ + I H N++ + G C++ +I EY K +L ++L + SY +
Sbjct: 91 MEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 556 -----WKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRG 594
+K+ A+G+ YL H D KIADFGLA+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ + R +MAPE + T + DV+S+GV++ E+
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 43/201 (21%)
Query: 470 LGRGGSGAVYKGV-LADGR----AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRM 522
LG G G VYKG+ + +G VA+K L + + + E + + + ++ R+
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 523 WGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL- 573
G C +L+ + +YV + ++ S Y L W + AKG+ YL
Sbjct: 85 LGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNW------CVQIAKGMNYLE 136
Query: 574 -----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK--GYMAPEWAS 616
H D KI DFG AKL G+ ++ G +MA E
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDFGRAKL--LGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 617 NLPITAKVDVYSYGVVILEMV 637
+ T + DV+SYGV + E++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELM 215
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 43/201 (21%)
Query: 470 LGRGGSGAVYKGV-LADGR----AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRM 522
LG G G VYKG+ + +G VA+K L + + + E + + + ++ R+
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 523 WGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL- 573
G C +L+ + +YV + ++ S Y L W + AKG+ YL
Sbjct: 87 LGICLTSTVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNW------CVQIAKGMNYLE 138
Query: 574 -----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK--GYMAPEWAS 616
H D KI DFG AKL G+ ++ G +MA E
Sbjct: 139 DRRLVHRDLAARNVLVKTPQHVKITDFGRAKL--LGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 617 NLPITAKVDVYSYGVVILEMV 637
+ T + DV+SYGV + E++
Sbjct: 197 HRIYTHQSDVWSYGVTVWELM 217
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 45/203 (22%)
Query: 470 LGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMWGFC-SE 528
+G G G V++ L + VA+K+ + Q + E+ + + H N+V + F S
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKK---VLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSN 104
Query: 529 GRHR-----LLIYEYVEKQSLDKHLFSSYFLGWKERFKVAL------GTAKGLAYLH--- 574
G + L+ EYV + + S ++ K+ + L + LAY+H
Sbjct: 105 GDKKDEVFLNLVLEYVPETV---YRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG 161
Query: 575 --HDEFEP------------KIADFGLAKLSQRG-SNSSQFSQIRGTKGYMAPEW---AS 616
H + +P K+ DFG AK+ G N S ++ Y APE A+
Sbjct: 162 ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXIC----SRYYRAPELIFGAT 217
Query: 617 NLPITAKVDVYSYGVVILEMVKG 639
N T +D++S G V+ E+++G
Sbjct: 218 NY--TTNIDIWSTGCVMAELMQG 238
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 34/205 (16%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDL--HQGEEVFWAEVSTIGKIY-HMNLVRMW 523
E LG G V V L +G+ AVK + H VF EV T+ + + N++ +
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVF-REVETLYQCQGNKNILELI 77
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEF 578
F + L++E ++ S+ H+ +E +V A L +LH H +
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDL 137
Query: 579 EP--------------KIADFGLA---KLSQRGS--NSSQFSQIRGTKGYMAPEWASNLP 619
+P KI DF L KL+ + + + + G+ YMAPE
Sbjct: 138 KPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFT 197
Query: 620 ITA-----KVDVYSYGVVILEMVKG 639
A + D++S GVV+ M+ G
Sbjct: 198 DQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 25/198 (12%)
Query: 466 FKEELGRGG-SGAVYKGVLADGRAVAVKRLGDLHQGEE----VFWAEVSTIGKIYHMNLV 520
F + LG G S V LA R A+K L H +E E + ++ H V
Sbjct: 41 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 100
Query: 521 RMWGFCSEGRHRLLI-YEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLAYLH---- 574
+++ FC + +L Y + L K++ F RF A L YLH
Sbjct: 101 KLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKGI 158
Query: 575 -HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITA 622
H + +P +I DFG AK+ S ++ + GT Y++PE +
Sbjct: 159 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 218
Query: 623 KVDVYSYGVVILEMVKGI 640
D+++ G +I ++V G+
Sbjct: 219 SSDLWALGCIIYQLVAGL 236
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 81/198 (40%), Gaps = 31/198 (15%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDL------HQGEEVFWAEVSTIGKIYHMNLV 520
EELG+G V + + + G+ A K + HQ E E + H N+V
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE---REARICRLLKHPNIV 66
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----H 575
R+ SE L+++ V L + + + + + + + + H H
Sbjct: 67 RLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVH 126
Query: 576 DEFEP--------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT 621
+ +P K+ADFGLA + +G + F GT GY++PE P
Sbjct: 127 RDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFG-FAGTPGYLSPEVLRKDPYG 184
Query: 622 AKVDVYSYGVVILEMVKG 639
VD+++ GV++ ++ G
Sbjct: 185 KPVDMWACGVILYILLVG 202
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 43/201 (21%)
Query: 470 LGRGGSGAVYKGV-LADGR----AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRM 522
LG G G VYKG+ + +G VA+K L + + + E + + + ++ R+
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 523 WGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL- 573
G C +L+ + +YV + ++ S Y L W + AKG+ YL
Sbjct: 90 LGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNW------CVQIAKGMNYLE 141
Query: 574 -----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK--GYMAPEWAS 616
H D KI DFG AKL G+ ++ G +MA E
Sbjct: 142 DRRLVHRDLAARNVLVKTPQHVKITDFGRAKL--LGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 617 NLPITAKVDVYSYGVVILEMV 637
+ T + DV+SYGV + E++
Sbjct: 200 HRIYTHQSDVWSYGVTVWELM 220
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 43/201 (21%)
Query: 470 LGRGGSGAVYKGV-LADGR----AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRM 522
LG G G VYKG+ + +G VA+K L + + + E + + + ++ R+
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 523 WGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL- 573
G C +L+ + +YV + ++ S Y L W + AKG+ YL
Sbjct: 85 LGICLTSTVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNW------CVQIAKGMNYLE 136
Query: 574 -----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK--GYMAPEWAS 616
H D KI DFG AKL G+ ++ G +MA E
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDFGRAKL--LGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 617 NLPITAKVDVYSYGVVILEMV 637
+ T + DV+SYGV + E++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELM 215
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 71/171 (41%), Gaps = 17/171 (9%)
Query: 467 KEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQ-----GEEVFWAEVSTIGKIYHMNLVR 521
K G+ + + A + R+ +LH+ E + E + G+I+ + L
Sbjct: 64 KRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPE 123
Query: 522 MWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHDEFEPK 581
+ SE LI + +E Y+L + L L + + K
Sbjct: 124 LAEMVSENDVIRLIKQILE---------GVYYLHQNNIVHLDLKPQNILLSSIYPLGDIK 174
Query: 582 IADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVV 632
I DFG+ S++ ++ + +I GT Y+APE + PIT D+++ G++
Sbjct: 175 IVDFGM---SRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGII 222
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 81/198 (40%), Gaps = 31/198 (15%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDL------HQGEEVFWAEVSTIGKIYHMNLV 520
EELG+G V + + + G+ A K + HQ E E + H N+V
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE---REARICRLLKHPNIV 66
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----H 575
R+ SE L+++ V L + + + + + + + + H H
Sbjct: 67 RLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVH 126
Query: 576 DEFEP--------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT 621
+ +P K+ADFGLA + +G + F GT GY++PE P
Sbjct: 127 RDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFG-FAGTPGYLSPEVLRKDPYG 184
Query: 622 AKVDVYSYGVVILEMVKG 639
VD+++ GV++ ++ G
Sbjct: 185 KPVDMWACGVILYILLVG 202
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 43/222 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVY--------KGVLADGRAVAVKRLGDLHQGEEV--FWAE 507
E + + + LG G G V K + VAVK L D +++ +E
Sbjct: 77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 136
Query: 508 VSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS--------SYFLG--- 555
+ + I H N++ + G C++ +I EY K +L ++L + SY +
Sbjct: 137 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 196
Query: 556 -----WKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRG 594
+K+ A+G+ YL H D KIADFGLA+
Sbjct: 197 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 256
Query: 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ + R +MAPE + T + DV+S+GV++ E+
Sbjct: 257 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 298
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 43/222 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVY--------KGVLADGRAVAVKRLGDLHQGEEV--FWAE 507
E + + + LG G G V K + VAVK L D +++ +E
Sbjct: 18 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 77
Query: 508 VSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS--------SYFLG--- 555
+ + I H N++ + G C++ +I EY K +L ++L + SY +
Sbjct: 78 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 137
Query: 556 -----WKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRG 594
+K+ A+G+ YL H D KIADFGLA+
Sbjct: 138 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNI 197
Query: 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ + R +MAPE + T + DV+S+GV++ E+
Sbjct: 198 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 239
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 43/201 (21%)
Query: 470 LGRGGSGAVYKGV-LADGR----AVAVKRLGDL--HQGEEVFWAEVSTIGKIYHMNLVRM 522
LG G G VYKG+ + +G VA+K L + + + E + + + ++ R+
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 523 WGFCSEGRHRLL--------IYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL- 573
G C +L+ + +YV + ++ S Y L W + AKG+ YL
Sbjct: 85 LGICLTSTVQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNW------CVQIAKGMNYLE 136
Query: 574 -----HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTK--GYMAPEWAS 616
H D KI DFG AKL G+ ++ G +MA E
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDFGRAKL--LGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 617 NLPITAKVDVYSYGVVILEMV 637
+ T + DV+SYGV + E++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELM 215
>pdb|2J8J|A Chain A, Solution Structure Of The A4 Domain Of Blood Coagulation
Factor Xi
pdb|2J8J|B Chain B, Solution Structure Of The A4 Domain Of Blood Coagulation
Factor Xi
pdb|2J8L|A Chain A, Fxi Apple 4 Domain Loop-Out Conformation
pdb|2J8L|B Chain B, Fxi Apple 4 Domain Loop-Out Conformation
Length = 90
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Query: 297 NTDFYGFDLNYSQTVSKEACMKLCLDDCRCSGFSYRLT------GQGLCFTK 342
+TDF G +L+ S EAC KLC + RC F+Y G+G C+ K
Sbjct: 9 DTDFLGEELDIVAAKSHEACQKLCTNAVRCQFFTYTPAQASCNEGKGKCYLK 60
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 43/222 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVY--------KGVLADGRAVAVKRLGDLHQGEEV--FWAE 507
E + + + LG G G V K + VAVK L D +++ +E
Sbjct: 23 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 82
Query: 508 VSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS--------SYFLG--- 555
+ + I H N++ + G C++ +I EY K +L ++L + SY +
Sbjct: 83 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 142
Query: 556 -----WKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRG 594
+K+ A+G+ YL H D KIADFGLA+
Sbjct: 143 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 202
Query: 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ + R +MAPE + T + DV+S+GV++ E+
Sbjct: 203 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 244
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 43/222 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVY--------KGVLADGRAVAVKRLGDLHQGEEV--FWAE 507
E + + + LG G G V K + VAVK L D +++ +E
Sbjct: 20 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 79
Query: 508 VSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS--------SYFLG--- 555
+ + I H N++ + G C++ +I EY K +L ++L + SY +
Sbjct: 80 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 139
Query: 556 -----WKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRG 594
+K+ A+G+ YL H D KIADFGLA+
Sbjct: 140 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 199
Query: 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ + R +MAPE + T + DV+S+GV++ E+
Sbjct: 200 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 241
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 83/200 (41%), Gaps = 33/200 (16%)
Query: 465 SFKEELGRGGSGAVYKGVLAD---GRAVAVKRLGDLHQGEEVFWAE-VSTIGKIYHMNLV 520
+ + +GRG G V++ + D G AVK++ EVF E + + +V
Sbjct: 61 THQPRVGRGSFGEVHR--MKDKQTGFQCAVKKVR-----LEVFRVEELVACAGLSSPRIV 113
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTA-KGLAYLH----- 574
++G EG + E +E SL + L ++R LG A +GL YLH
Sbjct: 114 PLYGAVREGPWVNIFMELLEGGSLGQ-LIKQMGCLPEDRALYYLGQALEGLEYLHTRRIL 172
Query: 575 ------------HDEFEPKIADFGLAKLSQR---GSNSSQFSQIRGTKGYMAPEWASNLP 619
D + DFG A Q G + I GT+ +MAPE P
Sbjct: 173 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 232
Query: 620 ITAKVDVYSYGVVILEMVKG 639
AKVD++S ++L M+ G
Sbjct: 233 CDAKVDIWSSCCMMLHMLNG 252
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 90/222 (40%), Gaps = 43/222 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVY--------KGVLADGRAVAVKRLGDLHQGEEV--FWAE 507
E + + + LG G G V K + VAVK L D +++ +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 508 VSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS--------SYFLG--- 555
+ + I H N++ + G C++ +I EY K +L ++L + SY +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 556 -----WKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRG 594
+K+ A+G+ YL H D +IADFGLA+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNI 210
Query: 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ + R +MAPE + T + DV+S+GV++ E+
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 28/193 (14%)
Query: 470 LGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGE------EVFWAEVSTIGKIYHMNLVRM 522
LG G VYK + + VA+K++ H+ E E+ + ++ H N++ +
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 523 WGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKV-ALGTAKGLAYLH-----HD 576
+ L+++++E L+ + + + K L T +GL YLH H
Sbjct: 78 LDAFGHKSNISLVFDFME-TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHR 136
Query: 577 EFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT-AKV 624
+ +P K+ADFGLAK GS + + T+ Y APE + V
Sbjct: 137 DLKPNNLLLDENGVLKLADFGLAK--SFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGV 194
Query: 625 DVYSYGVVILEMV 637
D+++ G ++ E++
Sbjct: 195 DMWAVGCILAELL 207
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 83/200 (41%), Gaps = 33/200 (16%)
Query: 465 SFKEELGRGGSGAVYKGVLAD---GRAVAVKRLGDLHQGEEVFWAE-VSTIGKIYHMNLV 520
+ + +GRG G V++ + D G AVK++ EVF E + + +V
Sbjct: 77 THQPRVGRGSFGEVHR--MKDKQTGFQCAVKKVR-----LEVFRVEELVACAGLSSPRIV 129
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTA-KGLAYLH----- 574
++G EG + E +E SL + L ++R LG A +GL YLH
Sbjct: 130 PLYGAVREGPWVNIFMELLEGGSLGQ-LIKQMGCLPEDRALYYLGQALEGLEYLHTRRIL 188
Query: 575 ------------HDEFEPKIADFGLAKLSQR---GSNSSQFSQIRGTKGYMAPEWASNLP 619
D + DFG A Q G + I GT+ +MAPE P
Sbjct: 189 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 248
Query: 620 ITAKVDVYSYGVVILEMVKG 639
AKVD++S ++L M+ G
Sbjct: 249 CDAKVDIWSSCCMMLHMLNG 268
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 80/197 (40%), Gaps = 31/197 (15%)
Query: 468 EELGRGGSGAVYKGV--LADGR--AVAVKRLGD--LHQGEEV--FWAEVSTIGKIYHMNL 519
E+LG G G V +G G+ +VAVK L L Q E + F EV+ + + H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS---SYFLGWKERFKVALGTAKGLAYLHHD 576
+R++G + ++ E SL L + LG R+ A+ A+G+ YL
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESK 130
Query: 577 EFEP----------------KIADFGLAKLSQRGSNSSQFSQIRGTK-GYMAPEWASNLP 619
F KI DFGL + + + + R + APE
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRT 190
Query: 620 ITAKVDVYSYGVVILEM 636
+ D + +GV + EM
Sbjct: 191 FSHASDTWMFGVTLWEM 207
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 31/218 (14%)
Query: 468 EELGRGGSGAVYKGVLADGRA-VAVKR--LGDLHQG-EEVFWAEVSTIGKIYHMNLVRMW 523
E++G G G V+K + VA+KR L D +G E+ + ++ H N+VR+
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVAL-GTAKGLAYLH-----HDE 577
+ L++E+ + Q L K+ S E K L KGL + H H +
Sbjct: 68 DVLHSDKKLTLVFEFCD-QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRD 126
Query: 578 FEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE--WASNLPITAKV 624
+P K+ADFGLA+ G +S T Y P+ + + L + +
Sbjct: 127 LKPQNLLINRNGELKLADFGLAR--AFGIPVRCYSAEVVTLWYRPPDVLFGAKL-YSTSI 183
Query: 625 DVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVR 662
D++S G + E+ R + G + +LKR R
Sbjct: 184 DMWSAGCIFAELANAAR----PLFPGNDVDDQLKRIFR 217
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 82/196 (41%), Gaps = 27/196 (13%)
Query: 466 FKEELGRGGSGAVYKGV-LADGRAVAVKRLG--DLH--QGEEVFWAEVSTIGKIYHMNLV 520
++++GRG VY+ L DG VA+K++ DL + E+ + ++ H N++
Sbjct: 36 IEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVI 95
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHL--FSSYFLGWKER--FKVALGTAKGLAYLH-- 574
+ + E ++ E + L + + F ER +K + L ++H
Sbjct: 96 KYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR 155
Query: 575 ---HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPI 620
H + +P K+ D GL + S ++ + GT YM+PE
Sbjct: 156 RVMHRDIKPANVFITATGVVKLGDLGLGRFF--SSKTTAAHSLVGTPYYMSPERIHENGY 213
Query: 621 TAKVDVYSYGVVILEM 636
K D++S G ++ EM
Sbjct: 214 NFKSDIWSLGCLLYEM 229
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 100/247 (40%), Gaps = 40/247 (16%)
Query: 423 IASGWWLLFRRQDVPSSLEEGYQA--LSSQFRRFSYA---ELKKSTKSFKEELGRGGSGA 477
+A W R PS E + L+ + + Y E+ +T + LGRG G
Sbjct: 51 LAKTWAARGSRSREPSPKTEDNEGVLLTEKLKPVDYEYREEVHWATHQLR--LGRGSFGE 108
Query: 478 VYKGVLAD---GRAVAVKRLGDLHQGEEVFWAE-VSTIGKIYHMNLVRMWGFCSEGRHRL 533
V++ + D G AVK++ EVF AE + + +V ++G EG
Sbjct: 109 VHR--MEDKQTGFQCAVKKVR-----LEVFRAEELMACAGLTSPRIVPLYGAVREGPWVN 161
Query: 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTA-KGLAYLHH----------------- 575
+ E +E SL + + L ++R LG A +GL YLH
Sbjct: 162 IFMELLEGGSLGQLVKEQGCLP-EDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSS 220
Query: 576 DEFEPKIADFGLAKLSQR---GSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVV 632
D + DFG A Q G + I GT+ +MAPE AKVDV+S +
Sbjct: 221 DGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCM 280
Query: 633 ILEMVKG 639
+L M+ G
Sbjct: 281 MLHMLNG 287
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 100/247 (40%), Gaps = 40/247 (16%)
Query: 423 IASGWWLLFRRQDVPSSLEEGYQA--LSSQFRRFSYA---ELKKSTKSFKEELGRGGSGA 477
+A W R PS E + L+ + + Y E+ +T + LGRG G
Sbjct: 32 LAKTWAARGSRSREPSPKTEDNEGVLLTEKLKPVDYEYREEVHWATHQLR--LGRGSFGE 89
Query: 478 VYKGVLAD---GRAVAVKRLGDLHQGEEVFWAE-VSTIGKIYHMNLVRMWGFCSEGRHRL 533
V++ + D G AVK++ EVF AE + + +V ++G EG
Sbjct: 90 VHR--MEDKQTGFQCAVKKVR-----LEVFRAEELMACAGLTSPRIVPLYGAVREGPWVN 142
Query: 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTA-KGLAYLHH----------------- 575
+ E +E SL + + L ++R LG A +GL YLH
Sbjct: 143 IFMELLEGGSLGQLVKEQGCLP-EDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSS 201
Query: 576 DEFEPKIADFGLAKLSQR---GSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVV 632
D + DFG A Q G + I GT+ +MAPE AKVDV+S +
Sbjct: 202 DGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCM 261
Query: 633 ILEMVKG 639
+L M+ G
Sbjct: 262 MLHMLNG 268
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 80/197 (40%), Gaps = 31/197 (15%)
Query: 468 EELGRGGSGAVYKGV--LADGR--AVAVKRLGD--LHQGEEV--FWAEVSTIGKIYHMNL 519
E+LG G G V +G G+ +VAVK L L Q E + F EV+ + + H NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS---SYFLGWKERFKVALGTAKGLAYLHHD 576
+R++G + ++ E SL L + LG R+ A+ A+G+ YL
Sbjct: 84 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESK 140
Query: 577 EFEP----------------KIADFGLAKLSQRGSNSSQFSQIRGTK-GYMAPEWASNLP 619
F KI DFGL + + + + R + APE
Sbjct: 141 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRT 200
Query: 620 ITAKVDVYSYGVVILEM 636
+ D + +GV + EM
Sbjct: 201 FSHASDTWMFGVTLWEM 217
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 80/197 (40%), Gaps = 31/197 (15%)
Query: 468 EELGRGGSGAVYKGV--LADGR--AVAVKRLGD--LHQGEEV--FWAEVSTIGKIYHMNL 519
E+LG G G V +G G+ +VAVK L L Q E + F EV+ + + H NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS---SYFLGWKERFKVALGTAKGLAYLHHD 576
+R++G + ++ E SL L + LG R+ A+ A+G+ YL
Sbjct: 78 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESK 134
Query: 577 EFEP----------------KIADFGLAKLSQRGSNSSQFSQIRGTK-GYMAPEWASNLP 619
F KI DFGL + + + + R + APE
Sbjct: 135 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 194
Query: 620 ITAKVDVYSYGVVILEM 636
+ D + +GV + EM
Sbjct: 195 FSHASDTWMFGVTLWEM 211
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 22/144 (15%)
Query: 516 HMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH- 574
H N++ + +G++ ++ E ++ L + F +E V K + YLH
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHA 134
Query: 575 ----HDEFEP---------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA 615
H + +P +I DFG AK R N + T ++APE
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAK-QLRAENGLLMTPCY-TANFVAPEVL 192
Query: 616 SNLPITAKVDVYSYGVVILEMVKG 639
A D++S GV++ M+ G
Sbjct: 193 ERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 30/195 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y +L R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ + S + T+ Y APE + V
Sbjct: 150 RDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 625 DVYSYGVVILEMVKG 639
D++S G ++ EM+KG
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 80/197 (40%), Gaps = 31/197 (15%)
Query: 468 EELGRGGSGAVYKGV--LADGR--AVAVKRLGD--LHQGEEV--FWAEVSTIGKIYHMNL 519
E+LG G G V +G G+ +VAVK L L Q E + F EV+ + + H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS---SYFLGWKERFKVALGTAKGLAYLHHD 576
+R++G + ++ E SL L + LG R+ A+ A+G+ YL
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESK 130
Query: 577 EFEP----------------KIADFGLAKLSQRGSNSSQFSQIRGTK-GYMAPEWASNLP 619
F KI DFGL + + + + R + APE
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 190
Query: 620 ITAKVDVYSYGVVILEM 636
+ D + +GV + EM
Sbjct: 191 FSHASDTWMFGVTLWEM 207
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 30/195 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y +L R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 33 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 90
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 91 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 150
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ + S + T+ Y APE + V
Sbjct: 151 RDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENV 207
Query: 625 DVYSYGVVILEMVKG 639
D++S G ++ EM+KG
Sbjct: 208 DIWSVGCIMGEMIKG 222
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 30/195 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y +L R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ + S + T+ Y APE + V
Sbjct: 150 RDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 625 DVYSYGVVILEMVKG 639
D++S G ++ EM+KG
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 39/206 (18%)
Query: 470 LGRGGSGAVYKGVLAD-GRAVAVKRLGDLHQGEEVFWA--EVSTIGKIYHMNLVRMW--- 523
LG GG+G V+ V D + VA+K++ L + V A E+ I ++ H N+V+++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIV-LTDPQSVKHALREIKIIRRLDHDNIVKVFEIL 77
Query: 524 -----------GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAY 572
G +E ++ EY+E L L L R +GL Y
Sbjct: 78 GPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQGPLLEEHARL-FMYQLLRGLKY 135
Query: 573 LH-----HDEFEP------------KIADFGLAK-LSQRGSNSSQFSQIRGTKGYMAPE- 613
+H H + +P KI DFGLA+ + S+ S+ TK Y +P
Sbjct: 136 IHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRL 195
Query: 614 WASNLPITAKVDVYSYGVVILEMVKG 639
S T +D+++ G + EM+ G
Sbjct: 196 LLSPNNYTKAIDMWAAGCIFAEMLTG 221
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 80/197 (40%), Gaps = 31/197 (15%)
Query: 468 EELGRGGSGAVYKGV--LADGR--AVAVKRLGD--LHQGEEV--FWAEVSTIGKIYHMNL 519
E+LG G G V +G G+ +VAVK L L Q E + F EV+ + + H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS---SYFLGWKERFKVALGTAKGLAYLHHD 576
+R++G + ++ E SL L + LG R+ A+ A+G+ YL
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESK 130
Query: 577 EFEP----------------KIADFGLAKLSQRGSNSSQFSQIRGTK-GYMAPEWASNLP 619
F KI DFGL + + + + R + APE
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 190
Query: 620 ITAKVDVYSYGVVILEM 636
+ D + +GV + EM
Sbjct: 191 FSHASDTWMFGVTLWEM 207
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 78/200 (39%), Gaps = 38/200 (19%)
Query: 469 ELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEV--FWAEVSTIGKIYHMNLVRMWG-- 524
ELG G G VYK + A+A ++ + EE+ + E+ + H +V++ G
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 525 -----------FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL 573
FC G ++ E LD+ L + AL +
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLE------LDRGLTEPQIQVVCRQMLEALNFLHSKRII 131
Query: 574 HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA-----SNL 618
H D E + ++ADFG++ ++ + GT +MAPE +
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 189
Query: 619 PITAKVDVYSYGVVILEMVK 638
P K D++S G+ ++EM +
Sbjct: 190 PYDYKADIWSLGITLIEMAQ 209
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 78/200 (39%), Gaps = 38/200 (19%)
Query: 469 ELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEV--FWAEVSTIGKIYHMNLVRMWG-- 524
ELG G G VYK + A+A ++ + EE+ + E+ + H +V++ G
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 525 -----------FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL 573
FC G ++ E LD+ L + AL +
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLE------LDRGLTEPQIQVVCRQMLEALNFLHSKRII 139
Query: 574 HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA-----SNL 618
H D E + ++ADFG++ ++ + GT +MAPE +
Sbjct: 140 HRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 197
Query: 619 PITAKVDVYSYGVVILEMVK 638
P K D++S G+ ++EM +
Sbjct: 198 PYDYKADIWSLGITLIEMAQ 217
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 30/195 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y +L R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIH 149
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ + S + T+ Y APE + V
Sbjct: 150 RDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 625 DVYSYGVVILEMVKG 639
D++S G ++ EM+KG
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 30/195 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y +L R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ + G++ ++ T+ Y APE + V
Sbjct: 150 RDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPEV-VTRYYRAPEVILGMGYKENV 206
Query: 625 DVYSYGVVILEMVKG 639
D++S G ++ EM+KG
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 581 KIADFGLAKLSQ-RGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
KIADFG+ K + G + F GT Y+APE + P VD +++GV++ EM+ G
Sbjct: 482 KIADFGMCKENIWDGVTTKXFC---GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 538
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 80/197 (40%), Gaps = 31/197 (15%)
Query: 468 EELGRGGSGAVYKGV--LADGR--AVAVKRLGD--LHQGEEV--FWAEVSTIGKIYHMNL 519
E+LG G G V +G G+ +VAVK L L Q E + F EV+ + + H NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS---SYFLGWKERFKVALGTAKGLAYLHHD 576
+R++G + ++ E SL L + LG R+ A+ A+G+ YL
Sbjct: 78 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESK 134
Query: 577 EFEP----------------KIADFGLAKLSQRGSNSSQFSQIRGTK-GYMAPEWASNLP 619
F KI DFGL + + + + R + APE
Sbjct: 135 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 194
Query: 620 ITAKVDVYSYGVVILEM 636
+ D + +GV + EM
Sbjct: 195 FSHASDTWMFGVTLWEM 211
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 80/197 (40%), Gaps = 31/197 (15%)
Query: 468 EELGRGGSGAVYKGV--LADGR--AVAVKRLGD--LHQGEEV--FWAEVSTIGKIYHMNL 519
E+LG G G V +G G+ +VAVK L L Q E + F EV+ + + H NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 520 VRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS---SYFLGWKERFKVALGTAKGLAYLHHD 576
+R++G + ++ E SL L + LG R+ A+ A+G+ YL
Sbjct: 84 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESK 140
Query: 577 EFEP----------------KIADFGLAKLSQRGSNSSQFSQIRGTK-GYMAPEWASNLP 619
F KI DFGL + + + + R + APE
Sbjct: 141 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 200
Query: 620 ITAKVDVYSYGVVILEM 636
+ D + +GV + EM
Sbjct: 201 FSHASDTWMFGVTLWEM 217
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 85/207 (41%), Gaps = 49/207 (23%)
Query: 470 LGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSE 528
LG G SG V GR VAVKR+ L ++ E+ + + H N++R + CSE
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRM--LIDFCDIALMEIKLLTESDDHPNVIRYY--CSE 96
Query: 529 GRHRLLIYEYVEKQSLD-------KHLFSSYFLGWKERFKVAL--GTAKGLAYLH----- 574
R L Y +E +L+ K++ KE ++L A G+A+LH
Sbjct: 97 TTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKII 155
Query: 575 HDEFEPK------------------------IADFGLAKLSQRGSNS--SQFSQIRGTKG 608
H + +P+ I+DFGL K G + GT G
Sbjct: 156 HRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSG 215
Query: 609 YMAPEW---ASNLPITAKVDVYSYGVV 632
+ APE ++ +T +D++S G V
Sbjct: 216 WRAPELLEESTKRRLTRSIDIFSMGCV 242
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 581 KIADFGLAKLSQ-RGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
KIADFG+ K + G + F GT Y+APE + P VD +++GV++ EM+ G
Sbjct: 161 KIADFGMCKENIWDGVTTKXFC---GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 217
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 30/194 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y VL R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIH 149
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ S + T+ Y APE + V
Sbjct: 150 RDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 625 DVYSYGVVILEMVK 638
D++S G ++ EMV+
Sbjct: 207 DIWSVGCIMGEMVR 220
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 30/195 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y +L R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ + S + T+ Y APE + V
Sbjct: 150 RDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 625 DVYSYGVVILEMVKG 639
D++S G ++ EM+KG
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 30/195 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y +L R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ + S + T+ Y APE + V
Sbjct: 150 RDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 625 DVYSYGVVILEMVKG 639
D++S G ++ EM+KG
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 85/207 (41%), Gaps = 49/207 (23%)
Query: 470 LGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSE 528
LG G SG V GR VAVKR+ L ++ E+ + + H N++R + CSE
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRM--LIDFCDIALMEIKLLTESDDHPNVIRYY--CSE 96
Query: 529 GRHRLLIYEYVEKQSLD-------KHLFSSYFLGWKERFKVAL--GTAKGLAYLH----- 574
R L Y +E +L+ K++ KE ++L A G+A+LH
Sbjct: 97 TTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKII 155
Query: 575 HDEFEPK------------------------IADFGLAKLSQRGSNS--SQFSQIRGTKG 608
H + +P+ I+DFGL K G + GT G
Sbjct: 156 HRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSG 215
Query: 609 YMAPEW---ASNLPITAKVDVYSYGVV 632
+ APE ++ +T +D++S G V
Sbjct: 216 WRAPELLEESTKRRLTRSIDIFSMGCV 242
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 84/208 (40%), Gaps = 34/208 (16%)
Query: 460 KKSTKSFKEELGRGGSGAVYKGVLADGRA----VAVKRLGD---LHQGEE--VFWAEVST 510
K S F + +G+G G V +LA +A AVK L L + EE +
Sbjct: 36 KPSDFHFLKVIGKGSFGKV---LLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVL 92
Query: 511 IGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY-FLGWKERFKVALGTAKG 569
+ + H LV + + +Y+ L HL FL + RF A A
Sbjct: 93 LKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAA-EIASA 151
Query: 570 LAYLH-----HDEFEPK-----------IADFGLAKLS-QRGSNSSQFSQIRGTKGYMAP 612
L YLH + + +P+ + DFGL K + + S +S F GT Y+AP
Sbjct: 152 LGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFC---GTPEYLAP 208
Query: 613 EWASNLPITAKVDVYSYGVVILEMVKGI 640
E P VD + G V+ EM+ G+
Sbjct: 209 EVLHKQPYDRTVDWWCLGAVLYEMLYGL 236
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 89/222 (40%), Gaps = 43/222 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVY--------KGVLADGRAVAVKRLGDLHQGEEV--FWAE 507
E + + + LG G G V K + VAVK L D +++ +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 508 VSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS--------SYFLG--- 555
+ + I H N++ + G C++ +I Y K +L ++L + SY +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 556 -----WKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRG 594
+K+ A+G+ YL H D KIADFGLA+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ + R +MAPE + T + DV+S+GV++ E+
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 77/194 (39%), Gaps = 26/194 (13%)
Query: 470 LGRGGSGAVYKGVLADGRA----VAVKRLGDLHQGEEV--FWAEVSTIGKIYHMNLVRMW 523
+G+G G VY G D A+K L + + ++V F E + + H N++ +
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 524 GFC--SEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYL------HH 575
G EG +L+ L K+ L A+G+ YL H
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHR 148
Query: 576 D----------EFEPKIADFGLAK--LSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK 623
D F K+ADFGLA+ L + + Q R + A E T K
Sbjct: 149 DLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTK 208
Query: 624 VDVYSYGVVILEMV 637
DV+S+GV++ E++
Sbjct: 209 SDVWSFGVLLWELL 222
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 80/195 (41%), Gaps = 30/195 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y +L R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 34 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 91
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 92 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 151
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ + S T+ Y APE + V
Sbjct: 152 RDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMVPFVVTRYYRAPEVILGMGYKENV 208
Query: 625 DVYSYGVVILEMVKG 639
D++S G ++ EM+KG
Sbjct: 209 DIWSVGCIMGEMIKG 223
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 81/195 (41%), Gaps = 30/195 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A + VL G VAVK+L Q + + + E+ + + H N++ +
Sbjct: 32 IGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 89
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ + + T+ Y APE + A V
Sbjct: 150 RDLKPSNIVVKSDCTLKILDFGLAR---TACTNFMMTPYVVTRYYRAPEVILGMGYAANV 206
Query: 625 DVYSYGVVILEMVKG 639
D++S G ++ E+VKG
Sbjct: 207 DIWSVGCIMGELVKG 221
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 108/280 (38%), Gaps = 50/280 (17%)
Query: 465 SFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLH---QGEEVFWAEVSTIGKIYHMNLVR 521
+F +L SG ++KG G + VK L + F E + H N++
Sbjct: 13 NFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLP 71
Query: 522 MWGFCS--EGRHRLLIYEYVEKQSLDK--HLFSSYFLGWKERFKVALGTAKGLAYLHHDE 577
+ G C H LI ++ SL H +++ + + K AL A+G+A+LH
Sbjct: 72 VLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH--T 129
Query: 578 FEPKIADFGL--------AKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAK------ 623
EP I L ++ R S + + AP W + + K
Sbjct: 130 LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNR 189
Query: 624 --VDVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVREVKRKILYEEEAWIEEIVD 681
D++S+ V++ E+V E A+L E+ K+ E + +
Sbjct: 190 RSADMWSFAVLLWELVT-----------REVPFADLSNM--EIGMKVALEG---LRPTIP 233
Query: 682 PRLKGKFNTNQAATLIGIGISCVDEDRSKRPTMDSVVQSL 721
P + + + L+ I C++ED +KRP D +V L
Sbjct: 234 PGI-----SPHVSKLMKI---CMNEDPAKRPKFDMIVPIL 265
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQF-SQIRGTKGYM 610
+GL Y+H H + +P KI DFGLA+++ + + F ++ T+ Y
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 611 APEWASNLP-ITAKVDVYSYGVVILEMV 637
APE N T +D++S G ++ EM+
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEML 226
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQF-SQIRGTKGYM 610
+GL Y+H H + +P KI DFGLA+++ + + F ++ T+ Y
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 611 APEWASNLP-ITAKVDVYSYGVVILEMV 637
APE N T +D++S G ++ EM+
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEML 226
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 87/211 (41%), Gaps = 53/211 (25%)
Query: 470 LGRGGSGAVYKGVLADGRAVAVKRLGDLHQGEEVFWAEVSTIGKI-YHMNLVRMWGFCSE 528
LG G SG V GR VAVKR+ L ++ E+ + + H N++R + CSE
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRM--LIDFCDIALMEIKLLTESDDHPNVIRYY--CSE 78
Query: 529 GRHRLLIYEYVEKQSLD-------KHLFSSYFLGWKERFKVAL--GTAKGLAYLH----- 574
R L Y +E +L+ K++ KE ++L A G+A+LH
Sbjct: 79 TTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKII 137
Query: 575 HDEFEPK------------------------IADFGLAKLSQRGSNS--SQFSQIRGTKG 608
H + +P+ I+DFGL K G + GT G
Sbjct: 138 HRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSG 197
Query: 609 YMAPEW---ASNLP----ITAKVDVYSYGVV 632
+ APE ++NL +T +D++S G V
Sbjct: 198 WRAPELLEESNNLQTKRRLTRSIDIFSMGCV 228
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQF-SQIRGTKGYM 610
+GL Y+H H + +P KI DFGLA+++ + + F ++ T+ Y
Sbjct: 140 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 199
Query: 611 APEWASNLP-ITAKVDVYSYGVVILEMV 637
APE N T +D++S G ++ EM+
Sbjct: 200 APEIMLNSKGYTKSIDIWSVGCILAEML 227
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQF-SQIRGTKGYM 610
+GL Y+H H + +P KI DFGLA+++ + + F ++ T+ Y
Sbjct: 141 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 200
Query: 611 APEWASNLP-ITAKVDVYSYGVVILEMV 637
APE N T +D++S G ++ EM+
Sbjct: 201 APEIMLNSKGYTKSIDIWSVGCILAEML 228
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQF-SQIRGTKGYM 610
+GL Y+H H + +P KI DFGLA+++ + + F ++ T+ Y
Sbjct: 132 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 191
Query: 611 APEWASNLP-ITAKVDVYSYGVVILEMV 637
APE N T +D++S G ++ EM+
Sbjct: 192 APEIMLNSKGYTKSIDIWSVGCILAEML 219
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQF-SQIRGTKGYM 610
+GL Y+H H + +P KI DFGLA+++ + + F ++ T+ Y
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 611 APEWASNLP-ITAKVDVYSYGVVILEMV 637
APE N T +D++S G ++ EM+
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEML 226
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQF-SQIRGTKGYM 610
+GL Y+H H + +P KI DFGLA+++ + + F ++ T+ Y
Sbjct: 143 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 202
Query: 611 APEWASNLP-ITAKVDVYSYGVVILEMV 637
APE N T +D++S G ++ EM+
Sbjct: 203 APEIMLNSKGYTKSIDIWSVGCILAEML 230
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQF-SQIRGTKGYM 610
+GL Y+H H + +P KI DFGLA+++ + + F ++ T+ Y
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 611 APEWASNLP-ITAKVDVYSYGVVILEMV 637
APE N T +D++S G ++ EM+
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEML 222
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQF-SQIRGTKGYM 610
+GL Y+H H + +P KI DFGLA+++ + + F ++ T+ Y
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 611 APEWASNLP-ITAKVDVYSYGVVILEMV 637
APE N T +D++S G ++ EM+
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEML 222
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQF-SQIRGTKGYM 610
+GL Y+H H + +P KI DFGLA+++ + + F ++ T+ Y
Sbjct: 155 RGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYR 214
Query: 611 APEWASNLP-ITAKVDVYSYGVVILEMV 637
APE N T +D++S G ++ EM+
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEML 242
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQF-SQIRGTKGYM 610
+GL Y+H H + +P KI DFGLA+++ + + F ++ T+ Y
Sbjct: 133 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 192
Query: 611 APEWASNLP-ITAKVDVYSYGVVILEMV 637
APE N T +D++S G ++ EM+
Sbjct: 193 APEIMLNSKGYTKSIDIWSVGCILAEML 220
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQF-SQIRGTKGYM 610
+GL Y+H H + +P KI DFGLA+++ + + F ++ T+ Y
Sbjct: 133 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 192
Query: 611 APEWASNLP-ITAKVDVYSYGVVILEMV 637
APE N T +D++S G ++ EM+
Sbjct: 193 APEIMLNSKGYTKSIDIWSVGCILAEML 220
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 81/205 (39%), Gaps = 25/205 (12%)
Query: 460 KKSTKSFK--EELGRGG-SGAVYKGVLADGRAVAVKRLGDLHQGEE----VFWAEVSTIG 512
KK + FK + LG G S V LA R A+K L H +E E +
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 65
Query: 513 KIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLA 571
++ H V+++ + Y + L K++ F RF A L
Sbjct: 66 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALE 124
Query: 572 YLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA 615
YLH H + +P +I DFG AK+ S ++ + GT Y++PE
Sbjct: 125 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 184
Query: 616 SNLPITAKVDVYSYGVVILEMVKGI 640
+ D+++ G +I ++V G+
Sbjct: 185 TEKSACKSSDLWALGCIIYQLVAGL 209
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQF-SQIRGTKGYM 610
+GL Y+H H + +P KI DFGLA+++ + + F ++ T+ Y
Sbjct: 137 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 611 APEWASNLP-ITAKVDVYSYGVVILEMV 637
APE N T +D++S G ++ EM+
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEML 224
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQF-SQIRGTKGYM 610
+GL Y+H H + +P KI DFGLA+++ + + F ++ T+ Y
Sbjct: 137 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 611 APEWASNLP-ITAKVDVYSYGVVILEMV 637
APE N T +D++S G ++ EM+
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEML 224
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQF-SQIRGTKGYM 610
+GL Y+H H + +P KI DFGLA+++ + + F ++ T+ Y
Sbjct: 155 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 214
Query: 611 APEWASNLP-ITAKVDVYSYGVVILEMV 637
APE N T +D++S G ++ EM+
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEML 242
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQF-SQIRGTKGYM 610
+GL Y+H H + +P KI DFGLA+++ + + F ++ T+ Y
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 611 APEWASNLP-ITAKVDVYSYGVVILEMV 637
APE N T +D++S G ++ EM+
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEML 226
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 82/199 (41%), Gaps = 38/199 (19%)
Query: 469 ELGRGGSGAVYKGVLADGR-----AVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
ELG G G+V +GV + A+ V + G E E + ++ + +VR+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVA------LGTAKGLAYLHHDE 577
G C + +L+ E L K + +G +E V+ + G+ YL
Sbjct: 403 GVC-QAEALMLVMEMAGGGPLHK-----FLVGKREEIPVSNVAELLHQVSMGMKYLEEKN 456
Query: 578 F----------------EPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWASNL 618
F KI+DFGL+K G++ S ++ K + APE +
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSK--ALGADDSYYTARSAGKWPLKWYAPECINFR 514
Query: 619 PITAKVDVYSYGVVILEMV 637
+++ DV+SYGV + E +
Sbjct: 515 KFSSRSDVWSYGVTMWEAL 533
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 30/195 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y +L R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ + S + T+ Y APE + V
Sbjct: 150 RDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 625 DVYSYGVVILEMVKG 639
D++S G ++ EM+KG
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQF-SQIRGTKGYM 610
+GL Y+H H + +P KI DFGLA+++ + + F ++ T+ Y
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 611 APEWASNLP-ITAKVDVYSYGVVILEMV 637
APE N T +D++S G ++ EM+
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEML 222
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 81/205 (39%), Gaps = 25/205 (12%)
Query: 460 KKSTKSFK--EELGRGG-SGAVYKGVLADGRAVAVKRLGDLHQGEE----VFWAEVSTIG 512
KK + FK + LG G S V LA R A+K L H +E E +
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63
Query: 513 KIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLA 571
++ H V+++ + Y + L K++ F RF A L
Sbjct: 64 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALE 122
Query: 572 YLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA 615
YLH H + +P +I DFG AK+ S ++ + GT Y++PE
Sbjct: 123 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 182
Query: 616 SNLPITAKVDVYSYGVVILEMVKGI 640
+ D+++ G +I ++V G+
Sbjct: 183 TEKSACKSSDLWALGCIIYQLVAGL 207
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 81/205 (39%), Gaps = 25/205 (12%)
Query: 460 KKSTKSFK--EELGRGG-SGAVYKGVLADGRAVAVKRLGDLHQGEE----VFWAEVSTIG 512
KK + FK + LG G S V LA R A+K L H +E E +
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 62
Query: 513 KIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLA 571
++ H V+++ + Y + L K++ F RF A L
Sbjct: 63 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALE 121
Query: 572 YLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA 615
YLH H + +P +I DFG AK+ S ++ + GT Y++PE
Sbjct: 122 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 181
Query: 616 SNLPITAKVDVYSYGVVILEMVKGI 640
+ D+++ G +I ++V G+
Sbjct: 182 TEKSACKSSDLWALGCIIYQLVAGL 206
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQF-SQIRGTKGYM 610
+GL Y+H H + +P KI DFGLA+++ + + F ++ T+ Y
Sbjct: 137 RGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 611 APEWASNLP-ITAKVDVYSYGVVILEMV 637
APE N T +D++S G ++ EM+
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEML 224
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQF-SQIRGTKGYM 610
+GL Y+H H + +P KI DFGLA+++ + + F ++ T+ Y
Sbjct: 155 RGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 214
Query: 611 APEWASNLP-ITAKVDVYSYGVVILEMV 637
APE N T +D++S G ++ EM+
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEML 242
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 81/205 (39%), Gaps = 25/205 (12%)
Query: 460 KKSTKSFK--EELGRGG-SGAVYKGVLADGRAVAVKRLGDLHQGEE----VFWAEVSTIG 512
KK + FK + LG G S V LA R A+K L H +E E +
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 64
Query: 513 KIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS-SYFLGWKERFKVALGTAKGLA 571
++ H V+++ + Y + L K++ F RF A L
Sbjct: 65 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALE 123
Query: 572 YLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA 615
YLH H + +P +I DFG AK+ S ++ + GT Y++PE
Sbjct: 124 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 183
Query: 616 SNLPITAKVDVYSYGVVILEMVKGI 640
+ D+++ G +I ++V G+
Sbjct: 184 TEKSACKSSDLWALGCIIYQLVAGL 208
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQF-SQIRGTKGYM 610
+GL Y+H H + +P KI DFGLA+++ + + F ++ T+ Y
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 611 APEWASNLP-ITAKVDVYSYGVVILEMV 637
APE N T +D++S G ++ EM+
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEML 226
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQF-SQIRGTKGYM 610
+GL Y+H H + +P KI DFGLA+++ + + F ++ T+ Y
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 611 APEWASNLP-ITAKVDVYSYGVVILEMV 637
APE N T +D++S G ++ EM+
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEML 222
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 16/88 (18%)
Query: 569 GLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAP 612
L YLH H + +P +I DFG AK+ S ++ + GT Y++P
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 203
Query: 613 EWASNLPITAKVDVYSYGVVILEMVKGI 640
E + + D+++ G +I ++V G+
Sbjct: 204 ELLTEKSASKSSDLWALGCIIYQLVAGL 231
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 87/206 (42%), Gaps = 36/206 (17%)
Query: 467 KEELGRGGSGAVYKGV-LADGRAVAVK-------RLG--DLHQGEEVFWAEVSTIGKIY- 515
K+ +GRG S V + V A G AVK RL L + E E + ++
Sbjct: 99 KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAG 158
Query: 516 HMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH- 574
H +++ + L+++ + K L +L L KE + + +++LH
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHA 218
Query: 575 ----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEW----- 614
H + +P +++DFG + + G + ++ GT GY+APE
Sbjct: 219 NNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE---KLRELCGTPGYLAPEILKCSM 275
Query: 615 -ASNLPITAKVDVYSYGVVILEMVKG 639
++ +VD+++ GV++ ++ G
Sbjct: 276 DETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 91/221 (41%), Gaps = 33/221 (14%)
Query: 447 LSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLAD------GRAVAVKRLGDLHQG 500
+ SQF A+ + ++L GSGA +G++ G VAVK+L Q
Sbjct: 4 MDSQFYSVQVADSTFTVLKRYQQLKPIGSGA--QGIVCAAFDTVLGINVAVKKLSRPFQN 61
Query: 501 E---EVFWAEVSTIGKIYHMNLVRMWG-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW 556
+ + + E+ + + H N++ + F + Y+ + +D +L +
Sbjct: 62 QTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMEL 121
Query: 557 -KERFKVAL-GTAKGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSS 598
ER L G+ +LH H + +P KI DFGLA+ S +
Sbjct: 122 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTNF 178
Query: 599 QFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
+ T+ Y APE + VD++S G ++ E+VKG
Sbjct: 179 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 89/222 (40%), Gaps = 43/222 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVY--------KGVLADGRAVAVKRLGDLHQGEEV--FWAE 507
E + + + LG G G V K + VAVK L D +++ +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 508 VSTIGKI-YHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFS--------SYFLG--- 555
+ + I H N++ + G C++ +I Y K +L ++L + SY +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 556 -----WKERFKVALGTAKGLAYL------HHD----------EFEPKIADFGLAKLSQRG 594
+K+ A+G+ YL H D KIADFGLA+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 595 SNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
+ + R +MAPE + T + DV+S+GV++ E+
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQF-SQIRGTKGYM 610
+GL Y+H H + +P KI DFGLA+++ + + F ++ T+ Y
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 611 APEWASNLP-ITAKVDVYSYGVVILEMV 637
APE N T +D++S G ++ EM+
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEML 222
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 30/194 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y VL R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIH 149
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ S + T+ Y APE + V
Sbjct: 150 RDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 625 DVYSYGVVILEMVK 638
D++S G ++ EMV+
Sbjct: 207 DIWSVGCIMGEMVR 220
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 55/144 (38%), Gaps = 22/144 (15%)
Query: 516 HMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH- 574
H N++ + +G+H L+ E + L + F +E V K + YLH
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 575 ----HDEFEP---------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA 615
H + +P +I DFG AK R N + T ++APE
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFGFAK-QLRAENGLLMTPCY-TANFVAPEVL 197
Query: 616 SNLPITAKVDVYSYGVVILEMVKG 639
D++S G+++ M+ G
Sbjct: 198 KRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 80/194 (41%), Gaps = 30/194 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y VL R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIH 142
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ + S + T+ Y APE + V
Sbjct: 143 RDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENV 199
Query: 625 DVYSYGVVILEMVK 638
D++S G ++ EMV+
Sbjct: 200 DIWSVGCIMGEMVR 213
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 18/88 (20%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQF-SQIRGTKGYM 610
+GL Y+H H + +P KI DFGLA+++ + + F + T+ Y
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYR 198
Query: 611 APEWASNLP-ITAKVDVYSYGVVILEMV 637
APE N T +D++S G ++ EM+
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEML 226
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 30/194 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y VL R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 187
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ S + T+ Y APE + V
Sbjct: 188 RDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 244
Query: 625 DVYSYGVVILEMVK 638
D++S G ++ EMV+
Sbjct: 245 DIWSVGCIMGEMVR 258
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 18/88 (20%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQF-SQIRGTKGYM 610
+GL Y+H H + +P KI DFGLA+++ + + F + T+ Y
Sbjct: 140 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYR 199
Query: 611 APEWASNLP-ITAKVDVYSYGVVILEMV 637
APE N T +D++S G ++ EM+
Sbjct: 200 APEIMLNSKGYTKSIDIWSVGCILAEML 227
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 75/192 (39%), Gaps = 25/192 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E E+ + H N++RM+
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + + L+ E+ + L K L + A L Y H H + +
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIK 142
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + S + + GT Y+ PE KVD++
Sbjct: 143 PENLLMGYKGELKIADFGWSV----HAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWC 198
Query: 629 YGVVILEMVKGI 640
GV+ E + G+
Sbjct: 199 AGVLCYEFLVGM 210
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 22/92 (23%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
KGL Y+H H + +P KI DFGLA R ++S + T+ Y A
Sbjct: 139 KGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA----RQADSEMXGXV-VTRWYRA 193
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKGIRL 642
PE N + T VD++S G ++ EM+ G L
Sbjct: 194 PEVILNWMRYTQTVDIWSVGCIMAEMITGKTL 225
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 55/144 (38%), Gaps = 22/144 (15%)
Query: 516 HMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH- 574
H N++ + +G+H L+ E + L + F +E V K + YLH
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 575 ----HDEFEP---------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA 615
H + +P +I DFG AK R N + T ++APE
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFGFAK-QLRAENGLLMTPCY-TANFVAPEVL 197
Query: 616 SNLPITAKVDVYSYGVVILEMVKG 639
D++S G+++ M+ G
Sbjct: 198 KRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2F83|A Chain A, Crystal Structure At 2.9 Angstroms Resolution Of Human
Plasma Coagulation Factor Xi Zymogen
Length = 625
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Query: 297 NTDFYGFDLNYSQTVSKEACMKLCLDDCRCSGFSYRLT------GQGLCFTK 342
+TDF G +L+ S EAC KLC + RC F+Y G+G C+ K
Sbjct: 298 DTDFLGEELDIVAAKSHEACQKLCTNAVRCQFFTYTPAQASCNEGKGKCYLK 349
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 10/65 (15%)
Query: 277 PKFNRT----------CSSSLTEVKFVGVPNTDFYGFDLNYSQTVSKEACMKLCLDDCRC 326
P+ NRT CS ++ + D G + N S S + C + C DD C
Sbjct: 87 PRVNRTAAISGYSFKQCSHQISACNKDIYVDLDMKGINYNSSVAKSAQECQERCTDDVHC 146
Query: 327 SGFSY 331
F+Y
Sbjct: 147 HFFTY 151
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 79/198 (39%), Gaps = 31/198 (15%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDL------HQGEEVFWAEVSTIGKIYHMNLV 520
E++G+G V + V L G A K + HQ E E + H N+V
Sbjct: 10 EDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLE---REARICRLLKHSNIV 66
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----H 575
R+ SE L+++ V L + + + + + + + + H H
Sbjct: 67 RLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVH 126
Query: 576 DEFEP--------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT 621
+ +P K+ADFGLA + +G + F GT GY++PE
Sbjct: 127 RDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFG-FAGTPGYLSPEVLRKEAYG 184
Query: 622 AKVDVYSYGVVILEMVKG 639
VD+++ GV++ ++ G
Sbjct: 185 KPVDIWACGVILYILLVG 202
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 75/192 (39%), Gaps = 25/192 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E E+ + H N++RM+
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + + L+ E+ + L K L + A L Y H H + +
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIK 141
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + S + + GT Y+ PE KVD++
Sbjct: 142 PENLLMGYKGELKIADFGWSV----HAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWC 197
Query: 629 YGVVILEMVKGI 640
GV+ E + G+
Sbjct: 198 AGVLCYEFLVGM 209
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 80/194 (41%), Gaps = 30/194 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y VL R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ + S + T+ Y APE + V
Sbjct: 150 RDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 625 DVYSYGVVILEMVK 638
D++S G ++ EMV+
Sbjct: 207 DIWSVGCIMGEMVR 220
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 75/192 (39%), Gaps = 25/192 (13%)
Query: 470 LGRGGSGAVYKGVLADGRAV-AVKRL--GDLHQG--EEVFWAEVSTIGKIYHMNLVRMWG 524
LG+G G VY + + A+K L L + E E+ + H N++RM+
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFE 579
+ + + L+ E+ + L K L + A L Y H H + +
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIK 141
Query: 580 P-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYS 628
P KIADFG + + S + + GT Y+ PE KVD++
Sbjct: 142 PENLLMGYKGELKIADFGWSV----HAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWC 197
Query: 629 YGVVILEMVKGI 640
GV+ E + G+
Sbjct: 198 AGVLCYEFLVGM 209
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 38/197 (19%)
Query: 469 ELGRGGSGAVYKGVLADGR-----AVAVKRLGDLHQGEEVFWAEVSTIGKIYHMNLVRMW 523
ELG G G+V +GV + A+ V + G E E + ++ + +VR+
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVA------LGTAKGLAYLHHDE 577
G C + +L+ E L K + +G +E V+ + G+ YL
Sbjct: 77 GVC-QAEALMLVMEMAGGGPLHK-----FLVGKREEIPVSNVAELLHQVSMGMKYLEEKN 130
Query: 578 F----------------EPKIADFGLAKLSQRGSNSSQFSQIRGTK---GYMAPEWASNL 618
F KI+DFGL+K G++ S ++ K + APE +
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSK--ALGADDSYYTARSAGKWPLKWYAPECINFR 188
Query: 619 PITAKVDVYSYGVVILE 635
+++ DV+SYGV + E
Sbjct: 189 KFSSRSDVWSYGVTMWE 205
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 30/194 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y VL R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ S + T+ Y APE + V
Sbjct: 150 RDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 625 DVYSYGVVILEMVK 638
D++S G ++ EMV+
Sbjct: 207 DIWSVGCIMGEMVR 220
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 42/202 (20%)
Query: 469 ELGRGGSGAV---YKGVLAD--GRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLV 520
+LG+G G+V L D G VAVK+L H G + F E+ + ++ +V
Sbjct: 14 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ--HSGPDQQRDFQREIQILKALHSDFIV 71
Query: 521 RMWGFC-SEGRHRL-LIYEYVE----KQSLDKH---LFSSYFLGWKERFKVALGTAKGLA 571
+ G GR L L+ EY+ + L +H L +S L + + KG+
Sbjct: 72 KYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGME 125
Query: 572 YL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGY-MAPEW 614
YL H D E KIADFGLAKL + + + + APE
Sbjct: 126 YLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPES 185
Query: 615 ASNLPITAKVDVYSYGVVILEM 636
S+ + + DV+S+GVV+ E+
Sbjct: 186 LSDNIFSRQSDVWSFGVVLYEL 207
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGI 640
+I+D GLA G GT GYMAPE N T D ++ G ++ EM+ G
Sbjct: 326 RISDLGLAVHVPEGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG- 381
Query: 641 RLSNWVVEDGEGQEAELKRFVREV 664
S + + + E++R V+EV
Sbjct: 382 -QSPFQQRKKKIKREEVERLVKEV 404
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGI 640
+I+D GLA G GT GYMAPE N T D ++ G ++ EM+ G
Sbjct: 326 RISDLGLAVHVPEGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG- 381
Query: 641 RLSNWVVEDGEGQEAELKRFVREV 664
S + + + E++R V+EV
Sbjct: 382 -QSPFQQRKKKIKREEVERLVKEV 404
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 569 GLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAP 612
L YLH H + +P +I DFG AK+ S ++ + GT Y++P
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 613 EWASNLPITAKVDVYSYGVVILEMVKGI 640
E + D+++ G +I ++V G+
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGL 229
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 569 GLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAP 612
L YLH H + +P +I DFG AK+ S ++ + GT Y++P
Sbjct: 126 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 185
Query: 613 EWASNLPITAKVDVYSYGVVILEMVKGI 640
E + D+++ G +I ++V G+
Sbjct: 186 ELLTEKSACKSSDLWALGCIIYQLVAGL 213
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 569 GLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAP 612
L YLH H + +P +I DFG AK+ S ++ + GT Y++P
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 613 EWASNLPITAKVDVYSYGVVILEMVKGI 640
E + D+++ G +I ++V G+
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGL 229
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 569 GLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAP 612
L YLH H + +P +I DFG AK+ S ++ + GT Y++P
Sbjct: 145 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 204
Query: 613 EWASNLPITAKVDVYSYGVVILEMVKGI 640
E + D+++ G +I ++V G+
Sbjct: 205 ELLTEKSACKSSDLWALGCIIYQLVAGL 232
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 30/194 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y VL R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 143
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ S + T+ Y APE + V
Sbjct: 144 RDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 200
Query: 625 DVYSYGVVILEMVK 638
D++S G ++ EMV+
Sbjct: 201 DIWSVGCIMGEMVR 214
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 569 GLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAP 612
L YLH H + +P +I DFG AK+ S ++ + GT Y++P
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 613 EWASNLPITAKVDVYSYGVVILEMVKGI 640
E + D+++ G +I ++V G+
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGL 231
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 569 GLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAP 612
L YLH H + +P +I DFG AK+ S ++ + GT Y++P
Sbjct: 141 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 200
Query: 613 EWASNLPITAKVDVYSYGVVILEMVKGI 640
E + D+++ G +I ++V G+
Sbjct: 201 ELLTEKSACKSSDLWALGCIIYQLVAGL 228
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 30/194 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y VL R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 142
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ S + T+ Y APE + V
Sbjct: 143 RDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 199
Query: 625 DVYSYGVVILEMVK 638
D++S G ++ EMV+
Sbjct: 200 DIWSVGCIMGEMVR 213
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 30/194 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y VL R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 31 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 88
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 89 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 148
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ S + T+ Y APE + V
Sbjct: 149 RDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 205
Query: 625 DVYSYGVVILEMVK 638
D++S G ++ EMV+
Sbjct: 206 DIWSVGCIMGEMVR 219
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 30/194 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y VL R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ S + T+ Y APE + V
Sbjct: 150 RDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 625 DVYSYGVVILEMVK 638
D++S G ++ EMV+
Sbjct: 207 DIWSVGCIMGEMVR 220
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 569 GLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAP 612
L YLH H + +P +I DFG AK+ S ++ + GT Y++P
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 613 EWASNLPITAKVDVYSYGVVILEMVKGI 640
E + D+++ G +I ++V G+
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGL 229
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 569 GLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAP 612
L YLH H + +P +I DFG AK+ S ++ + GT Y++P
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 613 EWASNLPITAKVDVYSYGVVILEMVKGI 640
E + D+++ G +I ++V G+
Sbjct: 204 ELLTEKSAXKSSDLWALGCIIYQLVAGL 231
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 98/231 (42%), Gaps = 44/231 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD----GRAVAVKRLGDLHQG--EEVFWAEVSTI 511
E+++ +G G G V++G+ AVA+K + E F E T+
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 512 GKIYHMNLVRMWG------------FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKER 559
+ H ++V++ G C+ G R + V K SLD +S L + +
Sbjct: 66 RQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQ--VRKFSLD---LASLIL-YAYQ 119
Query: 560 FKVALGTAKGLAYLHHDEFEP----------KIADFGLAKLSQRGSNSSQFSQIRGTKGY 609
AL + ++H D K+ DFGL++ + S + S+ + +
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTXXKASKGKLPIKW 178
Query: 610 MAPEWASNLPITAKVDVYSYGVVILEMV-------KGIRLSNWV--VEDGE 651
MAPE + T+ DV+ +GV + E++ +G++ ++ + +E+GE
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 229
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 30/194 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y VL R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 143
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ S + T+ Y APE + V
Sbjct: 144 RDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 200
Query: 625 DVYSYGVVILEMVK 638
D++S G ++ EMV+
Sbjct: 201 DIWSVGCIMGEMVR 214
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 569 GLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAP 612
L YLH H + +P +I DFG AK+ S ++ + GT Y++P
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSP 201
Query: 613 EWASNLPITAKVDVYSYGVVILEMVKGI 640
E + D+++ G +I ++V G+
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGL 229
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 569 GLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAP 612
L YLH H + +P +I DFG AK+ S ++ + GT Y++P
Sbjct: 141 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 200
Query: 613 EWASNLPITAKVDVYSYGVVILEMVKGI 640
E + D+++ G +I ++V G+
Sbjct: 201 ELLTEKSACKSSDLWALGCIIYQLVAGL 228
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 569 GLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAP 612
L YLH H + +P +I DFG AK+ S ++ + GT Y++P
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 613 EWASNLPITAKVDVYSYGVVILEMVKGI 640
E + D+++ G +I ++V G+
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGL 231
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 30/194 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y VL R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 150
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ S + T+ Y APE + V
Sbjct: 151 RDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 207
Query: 625 DVYSYGVVILEMVK 638
D++S G ++ EMV+
Sbjct: 208 DIWSVGCIMGEMVR 221
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 36/68 (52%)
Query: 573 LHHDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVV 632
L +++ +I DFG AK+ S ++ + GT Y++PE + D+++ G +
Sbjct: 167 LLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCI 226
Query: 633 ILEMVKGI 640
I ++V G+
Sbjct: 227 IYQLVAGL 234
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 36/68 (52%)
Query: 573 LHHDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVV 632
L +++ +I DFG AK+ S ++ + GT Y++PE + D+++ G +
Sbjct: 164 LLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCI 223
Query: 633 ILEMVKGI 640
I ++V G+
Sbjct: 224 IYQLVAGL 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 569 GLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAP 612
L YLH H + +P +I DFG AK+ S ++ + GT Y++P
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 613 EWASNLPITAKVDVYSYGVVILEMVKGI 640
E + D+++ G +I ++V G+
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGL 231
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 569 GLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAP 612
L YLH H + +P +I DFG AK+ S ++ + GT Y++P
Sbjct: 145 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 204
Query: 613 EWASNLPITAKVDVYSYGVVILEMVKGI 640
E + D+++ G +I ++V G+
Sbjct: 205 ELLTEKSACKSSDLWALGCIIYQLVAGL 232
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 30/194 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y VL R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ S + T+ Y APE + V
Sbjct: 150 RDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 625 DVYSYGVVILEMVK 638
D++S G ++ EMV+
Sbjct: 207 DIWSVGCIMGEMVR 220
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 30/194 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y VL R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 187
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ S + T+ Y APE + V
Sbjct: 188 RDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 244
Query: 625 DVYSYGVVILEMVK 638
D++S G ++ EMV+
Sbjct: 245 DIWSVGCIMGEMVR 258
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 80/194 (41%), Gaps = 30/194 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y VL R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 150
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ + S + T+ Y APE + V
Sbjct: 151 RDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENV 207
Query: 625 DVYSYGVVILEMVK 638
D++S G ++ EMV+
Sbjct: 208 DIWSVGCIMGEMVR 221
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ DFGL+K S + + GT YMAPE + T D +S+GV++ EM+ G
Sbjct: 166 KLTDFGLSKESI--DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 92/218 (42%), Gaps = 31/218 (14%)
Query: 468 EELGRGGSGAVYKGVLADGRA-VAVKR--LGDLHQG-EEVFWAEVSTIGKIYHMNLVRMW 523
E++G G G V+K + VA+KR L D +G E+ + ++ H N+VR+
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 524 GFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVAL-GTAKGLAYLH-----HDE 577
+ L++E+ + Q L K+ S E K L KGL + H H +
Sbjct: 68 DVLHSDKKLTLVFEFCD-QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRD 126
Query: 578 FEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE--WASNLPITAKV 624
+P K+A+FGLA+ G +S T Y P+ + + L + +
Sbjct: 127 LKPQNLLINRNGELKLANFGLAR--AFGIPVRCYSAEVVTLWYRPPDVLFGAKL-YSTSI 183
Query: 625 DVYSYGVVILEMVKGIRLSNWVVEDGEGQEAELKRFVR 662
D++S G + E+ R + G + +LKR R
Sbjct: 184 DMWSAGCIFAELANAGR----PLFPGNDVDDQLKRIFR 217
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ DFGL+K S + + GT YMAPE + T D +S+GV++ EM+ G
Sbjct: 167 KLTDFGLSKESI--DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ DFGL+K S + + GT YMAPE + T D +S+GV++ EM+ G
Sbjct: 166 KLTDFGLSKESI--DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 81/206 (39%), Gaps = 50/206 (24%)
Query: 466 FKEELGRGGSGAVYKGVLADGRA-VAVKRLGD--LHQGE-EVFWAEVSTIGKIYHMNLVR 521
F E+GRG VYKG+ + VA L D L + E + F E + + H N+VR
Sbjct: 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVR 89
Query: 522 M---WGFCSEGRHRL-LIYEYVEKQSLDKHLFSSYFLGWKERFKV---------ALGTAK 568
W +G+ + L+ E +L +L +RFKV K
Sbjct: 90 FYDSWESTVKGKKCIVLVTELXTSGTLKTYL---------KRFKVXKIKVLRSWCRQILK 140
Query: 569 GLAYLH-------HDEFE------------PKIADFGLAKLSQRGSNSSQFSQIRGTKGY 609
GL +LH H + + KI D GLA L + +S + GT +
Sbjct: 141 GLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR----ASFAKAVIGTPEF 196
Query: 610 MAPEWASNLPITAKVDVYSYGVVILE 635
APE VDVY++G LE
Sbjct: 197 XAPEXYEE-KYDESVDVYAFGXCXLE 221
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.8 bits (81), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 98/231 (42%), Gaps = 44/231 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD----GRAVAVKRLGDLHQG--EEVFWAEVSTI 511
E+++ +G G G V++G+ AVA+K + E F E T+
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 512 GKIYHMNLVRMWG------------FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKER 559
+ H ++V++ G C+ G R + V K SLD +S L + +
Sbjct: 66 RQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQ--VRKYSLD---LASLIL-YAYQ 119
Query: 560 FKVALGTAKGLAYLHHDEFEP----------KIADFGLAKLSQRGSNSSQFSQIRGTKGY 609
AL + ++H D K+ DFGL++ + S + S+ + +
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKW 178
Query: 610 MAPEWASNLPITAKVDVYSYGVVILEMV-------KGIRLSNWV--VEDGE 651
MAPE + T+ DV+ +GV + E++ +G++ ++ + +E+GE
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 229
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 75/196 (38%), Gaps = 26/196 (13%)
Query: 466 FKEELGRGGSGAV--YKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLV 520
++ +G+G V + VL GR VAVK + + + EV + + H N+V
Sbjct: 19 LQKTIGKGNFAKVKLARHVLT-GREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIV 77
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD---- 576
+++ + L+ EY + +L + + KE + Y H
Sbjct: 78 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVH 137
Query: 577 ------------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITA-K 623
+ KIADFG + G+ F G+ Y APE +
Sbjct: 138 RDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC---GSPPYAAPELFQGKKYDGPE 194
Query: 624 VDVYSYGVVILEMVKG 639
VDV+S GV++ +V G
Sbjct: 195 VDVWSLGVILYTLVSG 210
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 35.8 bits (81), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 582 IADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP---ITAKVDVYSYGVVILEMVK 638
I DF +A + R +Q + + GTK YMAPE S+ + VD +S GV E+++
Sbjct: 156 ITDFNIAAMLPR---ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLR 212
Query: 639 GIR 641
G R
Sbjct: 213 GRR 215
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ DFGL+K + + + GT YMAPE + + D +SYGV++ EM+ G
Sbjct: 170 KLTDFGLSK--EAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 42/202 (20%)
Query: 469 ELGRGGSGAV---YKGVLAD--GRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLV 520
+LG+G G+V L D G VAVK+L H G + F E+ + ++ +V
Sbjct: 18 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ--HSGPDQQRDFQREIQILKALHSDFIV 75
Query: 521 RMWGFC-SEGRHRL-LIYEYVE----KQSLDKH---LFSSYFLGWKERFKVALGTAKGLA 571
+ G GR L L+ EY+ + L +H L +S L + + KG+
Sbjct: 76 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGME 129
Query: 572 YL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGY-MAPEW 614
YL H D E KIADFGLAKL + + + + APE
Sbjct: 130 YLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 189
Query: 615 ASNLPITAKVDVYSYGVVILEM 636
S+ + + DV+S+GVV+ E+
Sbjct: 190 LSDNIFSRQSDVWSFGVVLYEL 211
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 98/231 (42%), Gaps = 44/231 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD----GRAVAVKRLGDLHQG--EEVFWAEVSTI 511
E+++ +G G G V++G+ AVA+K + E F E T+
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 512 GKIYHMNLVRMWG------------FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKER 559
+ H ++V++ G C+ G R + V K SLD +S L + +
Sbjct: 66 RQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQ--VRKYSLD---LASLIL-YAYQ 119
Query: 560 FKVALGTAKGLAYLHHDEFEP----------KIADFGLAKLSQRGSNSSQFSQIRGTKGY 609
AL + ++H D K+ DFGL++ + S + S+ + +
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKW 178
Query: 610 MAPEWASNLPITAKVDVYSYGVVILEMV-------KGIRLSNWV--VEDGE 651
MAPE + T+ DV+ +GV + E++ +G++ ++ + +E+GE
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 229
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 98/231 (42%), Gaps = 44/231 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD----GRAVAVKRLGDLHQG--EEVFWAEVSTI 511
E+++ +G G G V++G+ AVA+K + E F E T+
Sbjct: 34 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 93
Query: 512 GKIYHMNLVRMWG------------FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKER 559
+ H ++V++ G C+ G R + V K SLD +S L + +
Sbjct: 94 RQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQ--VRKYSLD---LASLIL-YAYQ 147
Query: 560 FKVALGTAKGLAYLHHDEFEP----------KIADFGLAKLSQRGSNSSQFSQIRGTKGY 609
AL + ++H D K+ DFGL++ + S + S+ + +
Sbjct: 148 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKW 206
Query: 610 MAPEWASNLPITAKVDVYSYGVVILEMV-------KGIRLSNWV--VEDGE 651
MAPE + T+ DV+ +GV + E++ +G++ ++ + +E+GE
Sbjct: 207 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 257
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 42/202 (20%)
Query: 469 ELGRGGSGAV---YKGVLAD--GRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLV 520
+LG+G G+V L D G VAVK+L H G + F E+ + ++ +V
Sbjct: 17 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ--HSGPDQQRDFQREIQILKALHSDFIV 74
Query: 521 RMWGFC-SEGRHRL-LIYEYVE----KQSLDKH---LFSSYFLGWKERFKVALGTAKGLA 571
+ G GR L L+ EY+ + L +H L +S L + + KG+
Sbjct: 75 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGME 128
Query: 572 YL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGY-MAPEW 614
YL H D E KIADFGLAKL + + + + APE
Sbjct: 129 YLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 188
Query: 615 ASNLPITAKVDVYSYGVVILEM 636
S+ + + DV+S+GVV+ E+
Sbjct: 189 LSDNIFSRQSDVWSFGVVLYEL 210
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 55/144 (38%), Gaps = 22/144 (15%)
Query: 516 HMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH- 574
H N++ + +G++ ++ E + L + F +E V K + YLH
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHA 134
Query: 575 ----HDEFEP---------------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWA 615
H + +P +I DFG AK Q + + T ++APE
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAK--QLRAENGLLXTPCYTANFVAPEVL 192
Query: 616 SNLPITAKVDVYSYGVVILEMVKG 639
A D++S GV++ + G
Sbjct: 193 ERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 98/231 (42%), Gaps = 44/231 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD----GRAVAVKRLGDLHQG--EEVFWAEVSTI 511
E+++ +G G G V++G+ AVA+K + E F E T+
Sbjct: 3 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 62
Query: 512 GKIYHMNLVRMWG------------FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKER 559
+ H ++V++ G C+ G R + V K SLD +S L + +
Sbjct: 63 RQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQ--VRKYSLD---LASLIL-YAYQ 116
Query: 560 FKVALGTAKGLAYLHHDEFEP----------KIADFGLAKLSQRGSNSSQFSQIRGTKGY 609
AL + ++H D K+ DFGL++ + S + S+ + +
Sbjct: 117 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKW 175
Query: 610 MAPEWASNLPITAKVDVYSYGVVILEMV-------KGIRLSNWV--VEDGE 651
MAPE + T+ DV+ +GV + E++ +G++ ++ + +E+GE
Sbjct: 176 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 226
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 28/105 (26%)
Query: 560 FKVALGTAKGLAYLH-----HDEFEP-----------KIADFGLAK-----------LSQ 592
+ + A+ + +LH H + +P K+ DFGL L+
Sbjct: 167 LHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 226
Query: 593 RGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMV 637
+ ++ Q+ GTK YM+PE + KVD++S G+++ E++
Sbjct: 227 MPAYATHXGQV-GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 98/231 (42%), Gaps = 44/231 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD----GRAVAVKRLGDLHQG--EEVFWAEVSTI 511
E+++ +G G G V++G+ AVA+K + E F E T+
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 512 GKIYHMNLVRMWG------------FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKER 559
+ H ++V++ G C+ G R + V K SLD +S L + +
Sbjct: 66 RQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQ--VRKFSLD---LASLIL-YAYQ 119
Query: 560 FKVALGTAKGLAYLHHDEFEP----------KIADFGLAKLSQRGSNSSQFSQIRGTKGY 609
AL + ++H D K+ DFGL++ + S + S+ + +
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKW 178
Query: 610 MAPEWASNLPITAKVDVYSYGVVILEMV-------KGIRLSNWV--VEDGE 651
MAPE + T+ DV+ +GV + E++ +G++ ++ + +E+GE
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 229
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 83/204 (40%), Gaps = 43/204 (21%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQGEEVFWAEVSTIGKIYH--MN 518
LG GG G+VY G+ ++D VA+K + G+L G V EV + K+
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKVSSGFSG 74
Query: 519 LVRMWGFCSEGRHRLLIYEYV-----------EKQSLDKHLFSSYFLGWKERFKVALGTA 567
++R+ + +LI E + E+ +L + L S+F E A+
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLE----AVRHC 130
Query: 568 KGLAYLHHD-----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH D E K+ DFG L + + ++ GT+ Y PEW
Sbjct: 131 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 186
Query: 617 NLPITAK-VDVYSYGVVILEMVKG 639
+ V+S G+++ +MV G
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 42/202 (20%)
Query: 469 ELGRGGSGAV---YKGVLAD--GRAVAVKRLGDLHQGEEV---FWAEVSTIGKIYHMNLV 520
+LG+G G+V L D G VAVK+L H G + F E+ + ++ +V
Sbjct: 30 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ--HSGPDQQRDFQREIQILKALHSDFIV 87
Query: 521 RMWGFC-SEGRHRL-LIYEYVE----KQSLDKH---LFSSYFLGWKERFKVALGTAKGLA 571
+ G GR L L+ EY+ + L +H L +S L + + KG+
Sbjct: 88 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGME 141
Query: 572 YL------HHD----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGY-MAPEW 614
YL H D E KIADFGLAKL + + + + APE
Sbjct: 142 YLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 201
Query: 615 ASNLPITAKVDVYSYGVVILEM 636
S+ + + DV+S+GVV+ E+
Sbjct: 202 LSDNIFSRQSDVWSFGVVLYEL 223
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 98/231 (42%), Gaps = 44/231 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD----GRAVAVKRLGDLHQG--EEVFWAEVSTI 511
E+++ +G G G V++G+ AVA+K + E F E T+
Sbjct: 11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 70
Query: 512 GKIYHMNLVRMWG------------FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKER 559
+ H ++V++ G C+ G R + V K SLD +S L + +
Sbjct: 71 RQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQ--VRKYSLD---LASLIL-YAYQ 124
Query: 560 FKVALGTAKGLAYLHHDEFEP----------KIADFGLAKLSQRGSNSSQFSQIRGTKGY 609
AL + ++H D K+ DFGL++ + S + S+ + +
Sbjct: 125 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKW 183
Query: 610 MAPEWASNLPITAKVDVYSYGVVILEMV-------KGIRLSNWV--VEDGE 651
MAPE + T+ DV+ +GV + E++ +G++ ++ + +E+GE
Sbjct: 184 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 234
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 43/204 (21%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQGEEVFWAEVSTIGKIYH--MN 518
LG GG G+VY G+ ++D VA+K + G+L G V EV + K+
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKVSSGFSG 75
Query: 519 LVRMWGFCSEGRHRLLIYE-----------YVEKQSLDKHLFSSYFLGWKERFKVALGTA 567
++R+ + +LI E E+ +L + L S+F E A+
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE----AVRHC 131
Query: 568 KGLAYLHHD-----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH D E K+ DFG L + + ++ GT+ Y PEW
Sbjct: 132 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 187
Query: 617 NLPITAK-VDVYSYGVVILEMVKG 639
+ V+S G+++ +MV G
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 43/204 (21%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQGEEVFWAEVSTIGKIYH--MN 518
LG GG G+VY G+ ++D VA+K + G+L G V EV + K+
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKVSSGFSG 74
Query: 519 LVRMWGFCSEGRHRLLIYE-----------YVEKQSLDKHLFSSYFLGWKERFKVALGTA 567
++R+ + +LI E E+ +L + L S+F E A+
Sbjct: 75 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE----AVRHC 130
Query: 568 KGLAYLHHD-----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH D E K+ DFG L + + ++ GT+ Y PEW
Sbjct: 131 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 186
Query: 617 NLPITAK-VDVYSYGVVILEMVKG 639
+ V+S G+++ +MV G
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 98/231 (42%), Gaps = 44/231 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD----GRAVAVKRLGDLHQG--EEVFWAEVSTI 511
E+++ +G G G V++G+ AVA+K + E F E T+
Sbjct: 9 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 68
Query: 512 GKIYHMNLVRMWG------------FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKER 559
+ H ++V++ G C+ G R + V K SLD +S L + +
Sbjct: 69 RQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQ--VRKYSLD---LASLIL-YAYQ 122
Query: 560 FKVALGTAKGLAYLHHDEFEP----------KIADFGLAKLSQRGSNSSQFSQIRGTKGY 609
AL + ++H D K+ DFGL++ + S + S+ + +
Sbjct: 123 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKW 181
Query: 610 MAPEWASNLPITAKVDVYSYGVVILEMV-------KGIRLSNWV--VEDGE 651
MAPE + T+ DV+ +GV + E++ +G++ ++ + +E+GE
Sbjct: 182 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 232
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 43/204 (21%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQGEEVFWAEVSTIGKIYH--MN 518
LG GG G+VY G+ ++D VA+K + G+L G V EV + K+
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKVSSGFSG 70
Query: 519 LVRMWGFCSEGRHRLLIYE-----------YVEKQSLDKHLFSSYFLGWKERFKVALGTA 567
++R+ + +LI E E+ +L + L S+F E A+
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE----AVRHC 126
Query: 568 KGLAYLHHD-----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH D E K+ DFG L + + ++ GT+ Y PEW
Sbjct: 127 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 182
Query: 617 NLPITAK-VDVYSYGVVILEMVKG 639
+ V+S G+++ +MV G
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 98/231 (42%), Gaps = 44/231 (19%)
Query: 458 ELKKSTKSFKEELGRGGSGAVYKGVLAD----GRAVAVKRLGDLHQG--EEVFWAEVSTI 511
E+++ +G G G V++G+ AVA+K + E F E T+
Sbjct: 8 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 67
Query: 512 GKIYHMNLVRMWG------------FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKER 559
+ H ++V++ G C+ G R + V K SLD +S L + +
Sbjct: 68 RQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQ--VRKYSLD---LASLIL-YAYQ 121
Query: 560 FKVALGTAKGLAYLHHDEFEP----------KIADFGLAKLSQRGSNSSQFSQIRGTKGY 609
AL + ++H D K+ DFGL++ + S + S+ + +
Sbjct: 122 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKW 180
Query: 610 MAPEWASNLPITAKVDVYSYGVVILEMV-------KGIRLSNWV--VEDGE 651
MAPE + T+ DV+ +GV + E++ +G++ ++ + +E+GE
Sbjct: 181 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 231
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 43/204 (21%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQGEEVFWAEVSTIGKIYH--MN 518
LG GG G+VY G+ ++D VA+K + G+L G V EV + K+
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKVSSGFSG 89
Query: 519 LVRMWGFCSEGRHRLLIYE-----------YVEKQSLDKHLFSSYFLGWKERFKVALGTA 567
++R+ + +LI E E+ +L + L S+F E A+
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE----AVRHC 145
Query: 568 KGLAYLHHD-----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH D E K+ DFG L + + ++ GT+ Y PEW
Sbjct: 146 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 201
Query: 617 NLPITAK-VDVYSYGVVILEMVKG 639
+ V+S G+++ +MV G
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 43/204 (21%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQGEEVFWAEVSTIGKIYH--MN 518
LG GG G+VY G+ ++D VA+K + G+L G V EV + K+
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKVSSGFSG 90
Query: 519 LVRMWGFCSEGRHRLLIYE-----------YVEKQSLDKHLFSSYFLGWKERFKVALGTA 567
++R+ + +LI E E+ +L + L S+F E A+
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE----AVRHC 146
Query: 568 KGLAYLHHD-----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH D E K+ DFG L + + ++ GT+ Y PEW
Sbjct: 147 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 202
Query: 617 NLPITAK-VDVYSYGVVILEMVKG 639
+ V+S G+++ +MV G
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 43/204 (21%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQGEEVFWAEVSTIGKIYH--MN 518
LG GG G+VY G+ ++D VA+K + G+L G V EV + K+
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKVSSGFSG 70
Query: 519 LVRMWGFCSEGRHRLLIYE-----------YVEKQSLDKHLFSSYFLGWKERFKVALGTA 567
++R+ + +LI E E+ +L + L S+F E A+
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE----AVRHC 126
Query: 568 KGLAYLHHD-----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH D E K+ DFG L + + ++ GT+ Y PEW
Sbjct: 127 HNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 182
Query: 617 NLPITAK-VDVYSYGVVILEMVKG 639
+ V+S G+++ +MV G
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 43/204 (21%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQGEEVFWAEVSTIGKIYH--MN 518
LG GG G+VY G+ ++D VA+K + G+L G V EV + K+
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKVSSGFSG 70
Query: 519 LVRMWGFCSEGRHRLLIYE-----------YVEKQSLDKHLFSSYFLGWKERFKVALGTA 567
++R+ + +LI E E+ +L + L S+F E A+
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE----AVRHC 126
Query: 568 KGLAYLHHD-----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH D E K+ DFG L + + ++ GT+ Y PEW
Sbjct: 127 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 182
Query: 617 NLPITAK-VDVYSYGVVILEMVKG 639
+ V+S G+++ +MV G
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 43/204 (21%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQGEEVFWAEVSTIGKIYH--MN 518
LG GG G+VY G+ ++D VA+K + G+L G V EV + K+
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKVSSGFSG 89
Query: 519 LVRMWGFCSEGRHRLLIYE-----------YVEKQSLDKHLFSSYFLGWKERFKVALGTA 567
++R+ + +LI E E+ +L + L S+F E A+
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE----AVRHC 145
Query: 568 KGLAYLHHD-----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH D E K+ DFG L + + ++ GT+ Y PEW
Sbjct: 146 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 201
Query: 617 NLPITAK-VDVYSYGVVILEMVKG 639
+ V+S G+++ +MV G
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 43/204 (21%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQGEEVFWAEVSTIGKIYH--MN 518
LG GG G+VY G+ ++D VA+K + G+L G V EV + K+
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKVSSGFSG 109
Query: 519 LVRMWGFCSEGRHRLLIYE-----------YVEKQSLDKHLFSSYFLGWKERFKVALGTA 567
++R+ + +LI E E+ +L + L S+F E A+
Sbjct: 110 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE----AVRHC 165
Query: 568 KGLAYLHHD-----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH D E K+ DFG L + + ++ GT+ Y PEW
Sbjct: 166 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 221
Query: 617 NLPITAK-VDVYSYGVVILEMVKG 639
+ V+S G+++ +MV G
Sbjct: 222 YHRYHGRSAAVWSLGILLYDMVCG 245
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 19/147 (12%)
Query: 507 EVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY---------VEKQSLDKHLFSSYF---- 553
E+S + + H ++++++ +++ EY V++ + + +F
Sbjct: 58 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQII 117
Query: 554 --LGWKERFKVALGTAKGLAYLHHDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+ + R K+ K L + KIADFGL+ + G+ G+ Y A
Sbjct: 118 SAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAA 174
Query: 612 PEWAS-NLPITAKVDVYSYGVVILEMV 637
PE S L +VDV+S GV++ M+
Sbjct: 175 PEVISGKLYAGPEVDVWSCGVILYVML 201
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 43/204 (21%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQGEEVFWAEVSTIGKIYH--MN 518
LG GG G+VY G+ ++D VA+K + G+L G V EV + K+
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKVSSGFSG 102
Query: 519 LVRMWGFCSEGRHRLLIYE-----------YVEKQSLDKHLFSSYFLGWKERFKVALGTA 567
++R+ + +LI E E+ +L + L S+F E A+
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE----AVRHC 158
Query: 568 KGLAYLHHD-----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH D E K+ DFG L + + ++ GT+ Y PEW
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 214
Query: 617 NLPITAK-VDVYSYGVVILEMVKG 639
+ V+S G+++ +MV G
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 43/204 (21%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQGEEVFWAEVSTIGKIYH--MN 518
LG GG G+VY G+ ++D VA+K + G+L G V EV + K+
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKVSSGFSG 75
Query: 519 LVRMWGFCSEGRHRLLIYE-----------YVEKQSLDKHLFSSYFLGWKERFKVALGTA 567
++R+ + +LI E E+ +L + L S+F E A+
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE----AVRHC 131
Query: 568 KGLAYLHHD-----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH D E K+ DFG L + + ++ GT+ Y PEW
Sbjct: 132 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 187
Query: 617 NLPITAK-VDVYSYGVVILEMVKG 639
+ V+S G+++ +MV G
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 43/204 (21%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQGEEVFWAEVSTIGKIYH--MN 518
LG GG G+VY G+ ++D VA+K + G+L G V EV + K+
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKVSSGFSG 73
Query: 519 LVRMWGFCSEGRHRLLIYE-----------YVEKQSLDKHLFSSYFLGWKERFKVALGTA 567
++R+ + +LI E E+ +L + L S+F E A+
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE----AVRHC 129
Query: 568 KGLAYLHHD-----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH D E K+ DFG L + + ++ GT+ Y PEW
Sbjct: 130 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 185
Query: 617 NLPITAK-VDVYSYGVVILEMVKG 639
+ V+S G+++ +MV G
Sbjct: 186 YHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 19/147 (12%)
Query: 507 EVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY---------VEKQSLDKHLFSSYF---- 553
E+S + + H ++++++ +++ EY V++ + + +F
Sbjct: 54 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQII 113
Query: 554 --LGWKERFKVALGTAKGLAYLHHDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+ + R K+ K L + KIADFGL+ + G+ G+ Y A
Sbjct: 114 SAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAA 170
Query: 612 PEWAS-NLPITAKVDVYSYGVVILEMV 637
PE S L +VDV+S GV++ M+
Sbjct: 171 PEVISGKLYAGPEVDVWSCGVILYVML 197
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 79/194 (40%), Gaps = 28/194 (14%)
Query: 470 LGRGGSGAVYKG-VLADGRAVAVKRLGD--LHQGEEV--FWAEVSTIGKIYHMNLVRMWG 524
LG+G VY+ + G VA+K + +++ V EV ++ H +++ ++
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 525 FCSEGRHRLLIYEYVEKQSLDKHL---FSSYFLGWKERFKVALGTAKGLAYLHHD----- 576
+ + + L+ E ++++L + F + T G+ YLH
Sbjct: 79 YFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIIT--GMLYLHSHGILHR 136
Query: 577 -----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVD 625
KIADFGLA +Q + + GT Y++PE A+ + D
Sbjct: 137 DLTLSNLLLTRNMNIKIADFGLA--TQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESD 194
Query: 626 VYSYGVVILEMVKG 639
V+S G + ++ G
Sbjct: 195 VWSLGCMFYTLLIG 208
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 43/204 (21%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQGEEVFWAEVSTIGKIYH--MN 518
LG GG G+VY G+ ++D VA+K + G+L G V EV + K+
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKVSSGFSG 90
Query: 519 LVRMWGFCSEGRHRLLIYE-----------YVEKQSLDKHLFSSYFLGWKERFKVALGTA 567
++R+ + +LI E E+ +L + L S+F E A+
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE----AVRHC 146
Query: 568 KGLAYLHHD-----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH D E K+ DFG L + + ++ GT+ Y PEW
Sbjct: 147 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 202
Query: 617 NLPITAK-VDVYSYGVVILEMVKG 639
+ V+S G+++ +MV G
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 43/204 (21%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQGEEVFWAEVSTIGKIYH--MN 518
LG GG G+VY G+ ++D VA+K + G+L G V EV + K+
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKVSSGFSG 90
Query: 519 LVRMWGFCSEGRHRLLIYE-----------YVEKQSLDKHLFSSYFLGWKERFKVALGTA 567
++R+ + +LI E E+ +L + L S+F E A+
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE----AVRHC 146
Query: 568 KGLAYLHHD-----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH D E K+ DFG L + + ++ GT+ Y PEW
Sbjct: 147 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 202
Query: 617 NLPITAK-VDVYSYGVVILEMVKG 639
+ V+S G+++ +MV G
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 21/148 (14%)
Query: 507 EVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY---------VEKQSLDKHLFSSYF---- 553
E+S + + H ++++++ +++ EY V++ + + +F
Sbjct: 63 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQII 122
Query: 554 --LGWKERFKVALGTAKGLAYLHHDEFEPKIADFGLAKLSQRGSNSSQFSQIR-GTKGYM 610
+ + R K+ K L + KIADFGL+ + G+ F + G+ Y
Sbjct: 123 SAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----FLKTSCGSPNYA 178
Query: 611 APEWAS-NLPITAKVDVYSYGVVILEMV 637
APE S L +VDV+S GV++ M+
Sbjct: 179 APEVISGKLYAGPEVDVWSCGVILYVML 206
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 43/204 (21%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQGEEVFWAEVSTIGKIYH--MN 518
LG GG G+VY G+ ++D VA+K + G+L G V EV + K+
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKVSSGFSG 103
Query: 519 LVRMWGFCSEGRHRLLIYE-----------YVEKQSLDKHLFSSYFLGWKERFKVALGTA 567
++R+ + +LI E E+ +L + L S+F E A+
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE----AVRHC 159
Query: 568 KGLAYLHHD-----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH D E K+ DFG L + + ++ GT+ Y PEW
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 215
Query: 617 NLPITAK-VDVYSYGVVILEMVKG 639
+ V+S G+++ +MV G
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 21/148 (14%)
Query: 507 EVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEY---------VEKQSLDKHLFSSYF---- 553
E+S + + H ++++++ +++ EY V++ + + +F
Sbjct: 64 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQII 123
Query: 554 --LGWKERFKVALGTAKGLAYLHHDEFEPKIADFGLAKLSQRGSNSSQFSQIR-GTKGYM 610
+ + R K+ K L + KIADFGL+ + G+ F + G+ Y
Sbjct: 124 SAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----FLKTSCGSPNYA 179
Query: 611 APEWAS-NLPITAKVDVYSYGVVILEMV 637
APE S L +VDV+S GV++ M+
Sbjct: 180 APEVISGKLYAGPEVDVWSCGVILYVML 207
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 43/204 (21%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQGEEVFWAEVSTIGKIYH--MN 518
LG GG G+VY G+ ++D VA+K + G+L G V EV + K+
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKVSSGFSG 102
Query: 519 LVRMWGFCSEGRHRLLIYE-----------YVEKQSLDKHLFSSYFLGWKERFKVALGTA 567
++R+ + +LI E E+ +L + L S+F E A+
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE----AVRHC 158
Query: 568 KGLAYLHHD-----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH D E K+ DFG L + + ++ GT+ Y PEW
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 214
Query: 617 NLPITAK-VDVYSYGVVILEMVKG 639
+ V+S G+++ +MV G
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 43/204 (21%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQGEEVFWAEVSTIGKIYH--MN 518
LG GG G+VY G+ ++D VA+K + G+L G V EV + K+
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKVSSGFSG 117
Query: 519 LVRMWGFCSEGRHRLLIYE-----------YVEKQSLDKHLFSSYFLGWKERFKVALGTA 567
++R+ + +LI E E+ +L + L S+F E A+
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE----AVRHC 173
Query: 568 KGLAYLHHD-----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH D E K+ DFG L + + ++ GT+ Y PEW
Sbjct: 174 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 229
Query: 617 NLPITAK-VDVYSYGVVILEMVKG 639
+ V+S G+++ +MV G
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 43/204 (21%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQGEEVFWAEVSTIGKIYH--MN 518
LG GG G+VY G+ ++D VA+K + G+L G V EV + K+
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKVSSGFSG 103
Query: 519 LVRMWGFCSEGRHRLLIYE-----------YVEKQSLDKHLFSSYFLGWKERFKVALGTA 567
++R+ + +LI E E+ +L + L S+F E A+
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE----AVRHC 159
Query: 568 KGLAYLHHD-----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH D E K+ DFG L + + ++ GT+ Y PEW
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 215
Query: 617 NLPITAK-VDVYSYGVVILEMVKG 639
+ V+S G+++ +MV G
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 43/204 (21%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQGEEVFWAEVSTIGKIYH--MN 518
LG GG G+VY G+ ++D VA+K + G+L G V EV + K+
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKVSSGFSG 102
Query: 519 LVRMWGFCSEGRHRLLIYE-----------YVEKQSLDKHLFSSYFLGWKERFKVALGTA 567
++R+ + +LI E E+ +L + L S+F E A+
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE----AVRHC 158
Query: 568 KGLAYLHHD-----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH D E K+ DFG L + + ++ GT+ Y PEW
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 214
Query: 617 NLPITAK-VDVYSYGVVILEMVKG 639
+ V+S G+++ +MV G
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 43/204 (21%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQGEEVFWAEVSTIGKIYH--MN 518
LG GG G+VY G+ ++D VA+K + G+L G V EV + K+
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKVSSGFSG 102
Query: 519 LVRMWGFCSEGRHRLLIYE-----------YVEKQSLDKHLFSSYFLGWKERFKVALGTA 567
++R+ + +LI E E+ +L + L S+F E A+
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE----AVRHC 158
Query: 568 KGLAYLHHD-----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH D E K+ DFG L + + ++ GT+ Y PEW
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 214
Query: 617 NLPITAK-VDVYSYGVVILEMVKG 639
+ V+S G+++ +MV G
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 43/204 (21%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQGEEVFWAEVSTIGKIYH--MN 518
LG GG G+VY G+ ++D VA+K + G+L G V EV + K+
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKVSSGFSG 103
Query: 519 LVRMWGFCSEGRHRLLIYE-----------YVEKQSLDKHLFSSYFLGWKERFKVALGTA 567
++R+ + +LI E E+ +L + L S+F E A+
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE----AVRHC 159
Query: 568 KGLAYLHHD-----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH D E K+ DFG L + + ++ GT+ Y PEW
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 215
Query: 617 NLPITAK-VDVYSYGVVILEMVKG 639
+ V+S G+++ +MV G
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 43/204 (21%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQGEEVFWAEVSTIGKIYH--MN 518
LG GG G+VY G+ ++D VA+K + G+L G V EV + K+
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKVSSGFSG 117
Query: 519 LVRMWGFCSEGRHRLLIYE-----------YVEKQSLDKHLFSSYFLGWKERFKVALGTA 567
++R+ + +LI E E+ +L + L S+F E A+
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE----AVRHC 173
Query: 568 KGLAYLHHD-----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH D E K+ DFG L + + ++ GT+ Y PEW
Sbjct: 174 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 229
Query: 617 NLPITAK-VDVYSYGVVILEMVKG 639
+ V+S G+++ +MV G
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 43/204 (21%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQGEEVFWAEVSTIGKIYH--MN 518
LG GG G+VY G+ ++D VA+K + G+L G V EV + K+
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKVSSGFSG 103
Query: 519 LVRMWGFCSEGRHRLLIYE-----------YVEKQSLDKHLFSSYFLGWKERFKVALGTA 567
++R+ + +LI E E+ +L + L S+F E A+
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE----AVRHC 159
Query: 568 KGLAYLHHD-----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH D E K+ DFG L + + ++ GT+ Y PEW
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 215
Query: 617 NLPITAK-VDVYSYGVVILEMVKG 639
+ V+S G+++ +MV G
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 43/204 (21%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQGEEVFWAEVSTIGKIYH--MN 518
LG GG G+VY G+ ++D VA+K + G+L G V EV + K+
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKVSSGFSG 75
Query: 519 LVRMWGFCSEGRHRLLIYE-----------YVEKQSLDKHLFSSYFLGWKERFKVALGTA 567
++R+ + +LI E E+ +L + L S+F E A+
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE----AVRHC 131
Query: 568 KGLAYLHHD-----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH D E K+ DFG L + + ++ GT+ Y PEW
Sbjct: 132 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 187
Query: 617 NLPITAK-VDVYSYGVVILEMVKG 639
+ V+S G+++ +MV G
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
KI DFGLA+ + + + R +MAPE + + K DV+SYGV++ E+
Sbjct: 239 KICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEI 294
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 573 LHHDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVV 632
L D+ +I+D GLA + G ++ GT G+MAPE VD ++ GV
Sbjct: 321 LLDDDGNVRISDLGLAVELKAGQTKTK--GYAGTPGFMAPELLLGEEYDFSVDYFALGVT 378
Query: 633 ILEMVKG---IRLSNWVVEDGEGQEAELKRFV 661
+ EM+ R VE+ E ++ L++ V
Sbjct: 379 LYEMIAARGPFRARGEKVENKELKQRVLEQAV 410
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 43/204 (21%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQGEEVFWAEVSTIGKIYH--MN 518
LG GG G+VY G+ ++D VA+K + G+L G V EV + K+
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKVSSGFSG 122
Query: 519 LVRMWGFCSEGRHRLLIYE-----------YVEKQSLDKHLFSSYFLGWKERFKVALGTA 567
++R+ + +LI E E+ +L + L S+F E A+
Sbjct: 123 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE----AVRHC 178
Query: 568 KGLAYLHHD-----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH D E K+ DFG L + + ++ GT+ Y PEW
Sbjct: 179 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 234
Query: 617 NLPITAK-VDVYSYGVVILEMVKG 639
+ V+S G+++ +MV G
Sbjct: 235 YHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGI 640
K+ DFG A S I T+ Y APE NL D++S+G V+ E+ G
Sbjct: 202 KLIDFGCATFK-----SDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGS 256
Query: 641 RLSNWVVEDGEGQEAELKRFVREVKRKILYE 671
L + + A ++ ++ + + +LYE
Sbjct: 257 LL--FRTHEHMEHLAMMESIIQPIPKNMLYE 285
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 43/204 (21%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRL--------GDLHQGEEVFWAEVSTIGKIYH--MN 518
LG GG G+VY G+ ++D VA+K + G+L G V EV + K+
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKVSSGFSG 97
Query: 519 LVRMWGFCSEGRHRLLIYE-----------YVEKQSLDKHLFSSYFLGWKERFKVALGTA 567
++R+ + +LI E E+ +L + L S+F E A+
Sbjct: 98 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE----AVRHC 153
Query: 568 KGLAYLHHD-----------EFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
LH D E K+ DFG L + + ++ GT+ Y PEW
Sbjct: 154 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 209
Query: 617 NLPITAK-VDVYSYGVVILEMVKG 639
+ V+S G+++ +MV G
Sbjct: 210 YHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 92/222 (41%), Gaps = 42/222 (18%)
Query: 454 FSYAELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGE----EVFWAEVS 509
F +K S +++G GGS V++ VL + + + + +L + + + + E++
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA 78
Query: 510 TIGKIYHMN--LVRMWGFCSEGRHRLLIYE---------YVEKQSLDKHLFSSYFLGWKE 558
+ K+ + ++R++ + ++ ++ E +K+S+D SY WK
Sbjct: 79 YLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSY---WKN 135
Query: 559 RFKVALGTAKGLAYLHHDEFEP----------KIADFGLAKLSQRGSNSSQFSQIRGTKG 608
+ A+ T +H D +P K+ DFG+A Q + S GT
Sbjct: 136 MLE-AVHTIHQHGIVHSD-LKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN 193
Query: 609 YMAPEWASNLPITAK-----------VDVYSYGVVILEMVKG 639
YM PE ++ + + DV+S G ++ M G
Sbjct: 194 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG 235
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 573 LHHDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVV 632
L D+ +I+D GLA + G ++ GT G+MAPE VD ++ GV
Sbjct: 321 LLDDDGNVRISDLGLAVELKAGQTKTK--GYAGTPGFMAPELLLGEEYDFSVDYFALGVT 378
Query: 633 ILEMVKG---IRLSNWVVEDGEGQEAELKRFV 661
+ EM+ R VE+ E ++ L++ V
Sbjct: 379 LYEMIAARGPFRARGEKVENKELKQRVLEQAV 410
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 573 LHHDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVV 632
L D+ +I+D GLA + G ++ GT G+MAPE VD ++ GV
Sbjct: 321 LLDDDGNVRISDLGLAVELKAGQTKTK--GYAGTPGFMAPELLLGEEYDFSVDYFALGVT 378
Query: 633 ILEMVKG---IRLSNWVVEDGEGQEAELKRFV 661
+ EM+ R VE+ E ++ L++ V
Sbjct: 379 LYEMIAARGPFRARGEKVENKELKQRVLEQAV 410
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 573 LHHDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVV 632
L D+ +I+D GLA + G ++ GT G+MAPE VD ++ GV
Sbjct: 321 LLDDDGNVRISDLGLAVELKAGQTKTK--GYAGTPGFMAPELLLGEEYDFSVDYFALGVT 378
Query: 633 ILEMVKG---IRLSNWVVEDGEGQEAELKRFV 661
+ EM+ R VE+ E ++ L++ V
Sbjct: 379 LYEMIAARGPFRARGEKVENKELKQRVLEQAV 410
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 78/193 (40%), Gaps = 30/193 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y +L R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 26 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 83
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 84 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 143
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ S + T+ Y APE + V
Sbjct: 144 RDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 200
Query: 625 DVYSYGVVILEMV 637
D++S G ++ EMV
Sbjct: 201 DLWSVGCIMGEMV 213
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 30/193 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y +L R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 37 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 94
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 95 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 154
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ + S + T+ Y APE + V
Sbjct: 155 RDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILGMGYKENV 211
Query: 625 DVYSYGVVILEMV 637
D++S G ++ EMV
Sbjct: 212 DLWSVGCIMGEMV 224
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 64/174 (36%), Gaps = 23/174 (13%)
Query: 486 GRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQ 542
GR VA+K + + + EV + + H N+V+++ + LI EY
Sbjct: 37 GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG 96
Query: 543 SLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFG 586
+ +L + + KE + Y H + KIADFG
Sbjct: 97 EVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFG 156
Query: 587 LAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITA-KVDVYSYGVVILEMVKG 639
+ G F G+ Y APE +VDV+S GV++ +V G
Sbjct: 157 FSNEFTVGGKLDTFC---GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + + T+ Y A
Sbjct: 143 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRWYRA 197
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + + T+ Y A
Sbjct: 143 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRWYRA 197
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + + T+ Y A
Sbjct: 143 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRWYRA 197
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 44/219 (20%)
Query: 470 LGRGGSGAVYKGVLAD----GRAVAVKRLGDLHQG--EEVFWAEVSTIGKIYHMNLVRMW 523
+G G G V++G+ AVA+K + E F E T+ + H ++V++
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 524 G------------FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLA 571
G C+ G R + V K SLD +S L + + AL +
Sbjct: 458 GVITENPVWIIMELCTLGELRSFLQ--VRKFSLD---LASLIL-YAYQLSTALAYLESKR 511
Query: 572 YLHHDEFEP----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT 621
++H D K+ DFGL++ + S + S+ + +MAPE + T
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 622 AKVDVYSYGVVILEMV-------KGIRLSNWV--VEDGE 651
+ DV+ +GV + E++ +G++ ++ + +E+GE
Sbjct: 571 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 609
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 82/193 (42%), Gaps = 30/193 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y +L R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ + G++ ++ T+ Y APE + V
Sbjct: 150 RDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEV-VTRYYRAPEVILGMGYKENV 206
Query: 625 DVYSYGVVILEMV 637
D++S G ++ EMV
Sbjct: 207 DIWSVGCIMGEMV 219
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 66/174 (37%), Gaps = 23/174 (13%)
Query: 486 GRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQ 542
G+ VAVK + + + EV + + H N+V+++ + L+ EY
Sbjct: 32 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 91
Query: 543 SLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFG 586
+ +L + ++ KE + Y H + KIADFG
Sbjct: 92 EVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG 151
Query: 587 LAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITA-KVDVYSYGVVILEMVKG 639
+ G+ F G+ Y APE +VDV+S GV++ +V G
Sbjct: 152 FSNEFTFGNKLDTFC---GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRA 190
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ADFG+ K + N + GT Y+APE + VD ++ GV++ EM+ G
Sbjct: 164 KLADFGMCK--EGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 132 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRA 186
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRA 190
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 44/219 (20%)
Query: 470 LGRGGSGAVYKGVLAD----GRAVAVKRLGDLHQG--EEVFWAEVSTIGKIYHMNLVRMW 523
+G G G V++G+ AVA+K + E F E T+ + H ++V++
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 524 G------------FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLA 571
G C+ G R + V K SLD +S L + + AL +
Sbjct: 458 GVITENPVWIIMELCTLGELRSFLQ--VRKFSLD---LASLIL-YAYQLSTALAYLESKR 511
Query: 572 YLHHDEFEP----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPIT 621
++H D K+ DFGL++ + S + S+ + +MAPE + T
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 622 AKVDVYSYGVVILEMV-------KGIRLSNWV--VEDGE 651
+ DV+ +GV + E++ +G++ ++ + +E+GE
Sbjct: 571 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 609
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGXVATRWYRA 190
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 63/174 (36%), Gaps = 23/174 (13%)
Query: 486 GRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQ 542
GR VA+K + + + EV + + H N+V+++ + LI EY
Sbjct: 40 GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG 99
Query: 543 SLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFG 586
+ +L + + KE + Y H + KIADFG
Sbjct: 100 EVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFG 159
Query: 587 LAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITA-KVDVYSYGVVILEMVKG 639
+ G F G Y APE +VDV+S GV++ +V G
Sbjct: 160 FSNEFTVGGKLDAFC---GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 190
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 133 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 187
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 190
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 147 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 201
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 190
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 141 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 195
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 133 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 187
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 135 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 189
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 190 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 218
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 190
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 190
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 132 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 186
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 148 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 202
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 142 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 196
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 190
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 134 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 188
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 217
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 148 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 202
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 138 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 192
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 141 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 195
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 138 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 192
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 190
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 143 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 197
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 159 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 213
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 132 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 186
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 148 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 202
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 156 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 210
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 138 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 192
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 155 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 209
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 141 RGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRA 195
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 190
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 141 RGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRA 195
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 190
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 191 PEIMLNAMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 190
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 132 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 186
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 147 RGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRA 201
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 138 RGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEMTGYVATRWYRA 192
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 146 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 200
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 201 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 229
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 68/175 (38%), Gaps = 25/175 (14%)
Query: 486 GRAVAVKRLGDLHQ----GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEK 541
G+ VAV R+ D Q + + EV + + H N+V+++ + L+ EY
Sbjct: 39 GKEVAV-RIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADF 585
+ +L + + KE + Y H + KIADF
Sbjct: 98 GEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADF 157
Query: 586 GLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITA-KVDVYSYGVVILEMVKG 639
G + G+ +F G+ Y APE +VDV+S GV++ +V G
Sbjct: 158 GFSNEFTFGNKLDEFC---GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
KI DFGL K + S+ + GT Y+APE + VD + GVV+ EM+ G
Sbjct: 145 KITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 142 RGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEMTGYVATRWYRA 196
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 142 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 196
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 156 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 210
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
KI DFGLA+ + + + R +MAPE + T + DV+S+GV++ E+
Sbjct: 233 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 288
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRA 190
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 155 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 209
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
KI DFGL K + S+ + GT Y+APE + VD + GVV+ EM+ G
Sbjct: 150 KITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 206
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
KI DFGLA+ + + + R +MAPE + T + DV+S+GV++ E+
Sbjct: 231 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 286
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 465 SFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGE----EVFWAEVSTIGKIYHMN-- 518
S +++G GGS V++ VL + + + + +L + + + + E++ + K+ +
Sbjct: 15 SILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 73
Query: 519 LVRMWGFCSEGRHRLLIYE---------YVEKQSLDKHLFSSYFLGWKERFKVALGTAKG 569
++R++ + ++ ++ E +K+S+D SY WK + A+ T
Sbjct: 74 IIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSY---WKNMLE-AVHTIHQ 129
Query: 570 LAYLHHDEFEP----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
+H D +P K+ DFG+A Q + S GT YM PE ++
Sbjct: 130 HGIVHSD-LKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 188
Query: 620 ITAK-----------VDVYSYGVVILEMVKG 639
+ + DV+S G ++ M G
Sbjct: 189 SSRENGKSKSKISPKSDVWSLGCILYYMTYG 219
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 465 SFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGE----EVFWAEVSTIGKIYHMN-- 518
S +++G GGS V++ VL + + + + +L + + + + E++ + K+ +
Sbjct: 59 SILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 519 LVRMWGFCSEGRHRLLIYE---------YVEKQSLDKHLFSSYFLGWKERFKVALGTAKG 569
++R++ + ++ ++ E +K+S+D SY WK + A+ T
Sbjct: 118 IIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSY---WKNMLE-AVHTIHQ 173
Query: 570 LAYLHHDEFEP----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
+H D +P K+ DFG+A Q + S GT YM PE ++
Sbjct: 174 HGIVHSD-LKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 232
Query: 620 ITAK-----------VDVYSYGVVILEMVKG 639
+ + DV+S G ++ M G
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYG 263
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
KI DFGLA+ + + + R +MAPE + T + DV+S+GV++ E+
Sbjct: 238 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 293
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 65/174 (37%), Gaps = 23/174 (13%)
Query: 486 GRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQ 542
G+ VAVK + + + EV + + H N+V+++ + L+ EY
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 543 SLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFG 586
+ +L + + KE + Y H + KIADFG
Sbjct: 99 EVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG 158
Query: 587 LAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITA-KVDVYSYGVVILEMVKG 639
+ G+ F G+ Y APE +VDV+S GV++ +V G
Sbjct: 159 FSNEFTFGNKLDTFC---GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEM 636
KI DFGLA+ + + + R +MAPE + T + DV+S+GV++ E+
Sbjct: 240 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 295
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 142 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 196
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 65/174 (37%), Gaps = 23/174 (13%)
Query: 486 GRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQ 542
G+ VAVK + + + EV + + H N+V+++ + L+ EY
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 543 SLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFG 586
+ +L + + KE + Y H + KIADFG
Sbjct: 99 EVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG 158
Query: 587 LAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITA-KVDVYSYGVVILEMVKG 639
+ G+ F G+ Y APE +VDV+S GV++ +V G
Sbjct: 159 FSNEFTFGNKLDTFC---GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 82/193 (42%), Gaps = 30/193 (15%)
Query: 470 LGRGGSG---AVYKGVLADGRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMW 523
+G G G A Y +L R VA+K+L Q + + + E+ + + H N++ +
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 524 G-FCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGW-KERFKVAL-GTAKGLAYLH-----H 575
F + Y+ + +D +L + ER L G+ +LH H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKV 624
+ +P KI DFGLA+ + G++ ++ T+ Y APE + V
Sbjct: 150 RDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEV-VTRYYRAPEVILGMGYKENV 206
Query: 625 DVYSYGVVILEMV 637
D++S G ++ EMV
Sbjct: 207 DLWSVGCIMGEMV 219
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + + T+ Y A
Sbjct: 165 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRA 219
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 220 PEIMLNWMHYNMTVDIWSVGCIMAELLTG 248
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
KI DFGL K + S+ + GT Y+APE + VD + GVV+ EM+ G
Sbjct: 145 KITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
KI DFGL K + S+ + GT Y+APE + VD + GVV+ EM+ G
Sbjct: 145 KITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
KI DFGL K + S+ + GT Y+APE + VD + GVV+ EM+ G
Sbjct: 145 KITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 581 KIADFGLAKLSQR-GSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ D+G+ K R G +S F GT Y+APE VD ++ GV++ EM+ G
Sbjct: 150 KLTDYGMCKEGLRPGDTTSXFC---GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 206
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 33.1 bits (74), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 33/199 (16%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVF----WAEVSTIGKIYHMNLVRMWG 524
+G G G+V + G VA+K+L Q E +F + E+ + + H N++ +
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSE-IFAKRAYRELLLLKHMQHENVIGLLD 108
Query: 525 FCSEGRHRLLIYEYVE----KQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----H 575
+ Y++ Q+ + + F K ++ V KGL Y+H H
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLV-YQMLKGLKYIHSAGVVH 167
Query: 576 DEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-WASNLPITAK 623
+ +P KI DFGLA+ + ++ + T+ Y APE S +
Sbjct: 168 RDLKPGNLAVNEDCELKILDFGLARHA-----DAEMTGYVVTRWYRAPEVILSWMHYNQT 222
Query: 624 VDVYSYGVVILEMVKGIRL 642
VD++S G ++ EM+ G L
Sbjct: 223 VDIWSVGCIMAEMLTGKTL 241
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 33.1 bits (74), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 581 KIADFGLAKLSQR-GSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ D+G+ K R G +S F GT Y+APE VD ++ GV++ EM+ G
Sbjct: 161 KLTDYGMCKEGLRPGDTTSXFC---GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 217
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 33.1 bits (74), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
KI DFGL K + S+ + GT Y+APE + VD + GVV+ EM+ G
Sbjct: 145 KITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 33.1 bits (74), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 581 KIADFGLAKLSQR-GSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ D+G+ K R G +S F GT Y+APE VD ++ GV++ EM+ G
Sbjct: 146 KLTDYGMCKEGLRPGDTTSXFC---GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 33.1 bits (74), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
KI DFGL K + S+ + GT Y+APE + VD + GVV+ EM+ G
Sbjct: 148 KITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 204
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 465 SFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGE----EVFWAEVSTIGKIYHMN-- 518
S +++G GGS V++ VL + + + + +L + + + + E++ + K+ +
Sbjct: 11 SILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 69
Query: 519 LVRMWGFCSEGRHRLLIYE---------YVEKQSLDKHLFSSYFLGWKERFKVALGTAKG 569
++R++ + ++ ++ E +K+S+D SY WK + A+ T
Sbjct: 70 IIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSY---WKNMLE-AVHTIHQ 125
Query: 570 LAYLHHDEFEP----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
+H D +P K+ DFG+A Q + S GT YM PE ++
Sbjct: 126 HGIVHSD-LKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 184
Query: 620 ITAK-----------VDVYSYGVVILEMVKG 639
+ + DV+S G ++ M G
Sbjct: 185 SSRENGKSKSKISPKSDVWSLGCILYYMTYG 215
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 581 KIADFGLAKLSQR-GSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ D+G+ K R G +S F GT Y+APE VD ++ GV++ EM+ G
Sbjct: 193 KLTDYGMCKEGLRPGDTTSTFC---GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 249
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 35/200 (17%)
Query: 470 LGRGGSGAVYKGV-LADGRAVAVKRLGDLHQGEEVF----WAEVSTIGKIYHMNLVRMWG 524
+G G G+V + G VA+K+L Q E +F + E+ + + H N++ +
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSE-IFAKRAYRELLLLKHMQHENVIGLLD 90
Query: 525 FCSEGRHRLLIYE-YVEKQSLDKHLFSSYFLGWK---ERFK-VALGTAKGLAYLH----- 574
+ Y+ Y+ + L +G K E+ + + KGL Y+H
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTDL--QKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVV 148
Query: 575 HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPE-WASNLPITA 622
H + +P KI DFGLA+ + ++ + T+ Y APE S +
Sbjct: 149 HRDLKPGNLAVNEDCELKILDFGLARHA-----DAEMTGYVVTRWYRAPEVILSWMHYNQ 203
Query: 623 KVDVYSYGVVILEMVKGIRL 642
VD++S G ++ EM+ G L
Sbjct: 204 TVDIWSVGCIMAEMLTGKTL 223
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + T+ Y A
Sbjct: 156 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMXGXVATRWYRA 210
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ DFG+A Q G + GT +MAPE P VDV+ GV++ ++ G
Sbjct: 173 KLGDFGVA--IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 64/174 (36%), Gaps = 23/174 (13%)
Query: 486 GRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQ 542
G+ VAVK + + + EV + + H N+V+++ + L+ EY
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 543 SLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADFG 586
+ +L + + KE + Y H + KIADFG
Sbjct: 99 EVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG 158
Query: 587 LAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITA-KVDVYSYGVVILEMVKG 639
+ G+ F G Y APE +VDV+S GV++ +V G
Sbjct: 159 FSNEFTFGNKLDAFC---GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 22/89 (24%)
Query: 568 KGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMA 611
+GL Y+H H + +P KI DFGLA+ + T+ Y A
Sbjct: 159 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMXGYVATRWYRA 213
Query: 612 PEWASN-LPITAKVDVYSYGVVILEMVKG 639
PE N + VD++S G ++ E++ G
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 465 SFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGE----EVFWAEVSTIGKIYHMN-- 518
S +++G GGS V++ VL + + + + +L + + + + E++ + K+ +
Sbjct: 12 SILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 70
Query: 519 LVRMWGFCSEGRHRLLIYE---------YVEKQSLDKHLFSSYFLGWKERFKVALGTAKG 569
++R++ + ++ ++ E +K+S+D SY WK + A+ T
Sbjct: 71 IIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSY---WKNMLE-AVHTIHQ 126
Query: 570 LAYLHHDEFEP----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
+H D +P K+ DFG+A Q + S GT YM PE ++
Sbjct: 127 HGIVHSD-LKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 185
Query: 620 ITAK-----------VDVYSYGVVILEMVKG 639
+ + DV+S G ++ M G
Sbjct: 186 SSRENGKSKSKISPKSDVWSLGCILYYMTYG 216
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 29/143 (20%), Positives = 53/143 (37%), Gaps = 21/143 (14%)
Query: 516 HMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH- 574
H N+V++ + H L+ E + L + + E + ++++H
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHD 124
Query: 575 ------------------HDEFEPKIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWAS 616
+D E KI DFG A+L + ++ T Y APE +
Sbjct: 125 VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL--KPPDNQPLKTPCFTLHYAAPELLN 182
Query: 617 NLPITAKVDVYSYGVVILEMVKG 639
D++S GV++ M+ G
Sbjct: 183 QNGYDESCDLWSLGVILYTMLSG 205
>pdb|2CDG|A Chain A, Structure And Binding Kinetics Of Three Different Human
Cd1d-Alpha-Galactosylceramide-Specific T Cell Receptors
(Tcr 5b)
Length = 184
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Query: 113 RKSTKLISGVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPD---PDFDVFQNGRT 169
+KS+ L+ + YF FD + L +Y G WPD PD V+Q +
Sbjct: 61 KKSSSLLITASRAADTASYFCAPFDRGSTLGRLYFGRGTQLTVWPDIQNPDPAVYQLRDS 120
Query: 170 KYNSSRIAVLDDFGSFSSSDELKFSAI 196
K + + + DF S ++ + K S +
Sbjct: 121 KSSDKSVCLFTDFDSQTNVSQSKDSDV 147
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 67/175 (38%), Gaps = 25/175 (14%)
Query: 486 GRAVAVKRLGDLHQ----GEEVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEK 541
G+ VAV R+ D Q + + EV + + H N+V+++ + L+ EY
Sbjct: 39 GKEVAV-RIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 542 QSLDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------------EFEPKIADF 585
+ +L + + KE + Y H + KIADF
Sbjct: 98 GEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADF 157
Query: 586 GLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITA-KVDVYSYGVVILEMVKG 639
G + G+ F G+ Y APE +VDV+S GV++ +V G
Sbjct: 158 GFSNEFTFGNKLDTFC---GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 85/206 (41%), Gaps = 33/206 (16%)
Query: 466 FKEELGRGGSGAVYKGVLADGR-AVAVKR--LGDLHQGEEVFWAEVSTIGKIYHMNLVRM 522
+E +G G + V A + VA+KR L + E+ + + +H N+V
Sbjct: 14 LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSY 73
Query: 523 W-GFCSEGRHRLLIYEYVEKQSLD--KHLFS-----SYFLGWKERFKVALGTAKGLAYLH 574
+ F + L++ LD KH+ + S L + +GL YLH
Sbjct: 74 YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH 133
Query: 575 -----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIR----GTKGYMAPEW 614
H + + +IADFG++ G + ++ +++R GT +MAPE
Sbjct: 134 KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR-NKVRKTFVGTPCWMAPEV 192
Query: 615 ASNLP-ITAKVDVYSYGVVILEMVKG 639
+ K D++S+G+ +E+ G
Sbjct: 193 MEQVRGYDFKADIWSFGITAIELATG 218
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKGI 640
++ DFG A + S I T+ Y APE L + DV+S G +I E G
Sbjct: 196 RVVDFGSATF-----DHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGF 250
Query: 641 RLSNWVVEDGEGQEAELKRFVREVKRKIL 669
L + D A ++R + + +++
Sbjct: 251 TL--FQTHDNREHLAMMERILGPIPSRMI 277
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 85/206 (41%), Gaps = 33/206 (16%)
Query: 466 FKEELGRGGSGAVYKGVLADGR-AVAVKR--LGDLHQGEEVFWAEVSTIGKIYHMNLVRM 522
+E +G G + V A + VA+KR L + E+ + + +H N+V
Sbjct: 19 LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSY 78
Query: 523 W-GFCSEGRHRLLIYEYVEKQSLD--KHLFS-----SYFLGWKERFKVALGTAKGLAYLH 574
+ F + L++ LD KH+ + S L + +GL YLH
Sbjct: 79 YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH 138
Query: 575 -----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIR----GTKGYMAPEW 614
H + + +IADFG++ G + ++ +++R GT +MAPE
Sbjct: 139 KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR-NKVRKTFVGTPCWMAPEV 197
Query: 615 ASNLP-ITAKVDVYSYGVVILEMVKG 639
+ K D++S+G+ +E+ G
Sbjct: 198 MEQVRGYDFKADIWSFGITAIELATG 223
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 465 SFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGE----EVFWAEVSTIGKIYHMN-- 518
S +++G GGS V++ VL + + + + +L + + + + E++ + K+ +
Sbjct: 59 SILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 519 LVRMWGFCSEGRHRLLIYE---------YVEKQSLDKHLFSSYFLGWKERFKVALGTAKG 569
++R++ + ++ ++ E +K+S+D SY WK + A+ T
Sbjct: 118 IIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSY---WKNMLE-AVHTIHQ 173
Query: 570 LAYLHHDEFEP----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
+H D +P K+ DFG+A Q + S GT YM PE ++
Sbjct: 174 HGIVHSD-LKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 232
Query: 620 ITAK-----------VDVYSYGVVILEMVKG 639
+ + DV+S G ++ M G
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYG 263
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 581 KIADFGLAKLS-QRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
KI DFGL K + G+ F GT Y+APE + VD + GVV+ EM+ G
Sbjct: 289 KITDFGLCKEGIKDGATMKTFC---GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 345
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 581 KIADFGLAKLS-QRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
KI DFGL K + G+ F GT Y+APE + VD + GVV+ EM+ G
Sbjct: 292 KITDFGLCKEGIKDGATMKTFC---GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 348
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 581 KIADFGLAKLS-QRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
KI DFGL K + G+ F GT Y+APE + VD + GVV+ EM+ G
Sbjct: 151 KITDFGLCKEGIKDGATMKXFC---GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 207
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 581 KIADFGLAKLS-QRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
KI DFGL K + G+ F GT Y+APE + VD + GVV+ EM+ G
Sbjct: 149 KITDFGLCKEGIKDGATMKXFC---GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 205
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 581 KIADFGLAKLS-QRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
KI DFGL K + G+ F GT Y+APE + VD + GVV+ EM+ G
Sbjct: 150 KITDFGLCKEGIKDGATMKXFC---GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 206
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 62/150 (41%), Gaps = 20/150 (13%)
Query: 507 EVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGT 566
E+ + H ++++++ S ++ EYV L ++ + E ++
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQI 120
Query: 567 AKGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYM 610
+ Y H H + +P KIADFGL+ + S+ G+ Y
Sbjct: 121 LSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM---SDGEFLRDSCGSPNYA 177
Query: 611 APEWAS-NLPITAKVDVYSYGVVILEMVKG 639
APE S L +VD++S GV++ ++ G
Sbjct: 178 APEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Query: 507 EVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSYFLGWKERFKVALGT 566
E+ + H ++++++ S ++ EYV L ++ + E ++
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQI 120
Query: 567 AKGLAYLH-----HDEFEP-----------KIADFGLAKLSQRGSNSSQFSQIR-GTKGY 609
+ Y H H + +P KIADFGL+ + G +F + G+ Y
Sbjct: 121 LSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG----EFLRTSCGSPNY 176
Query: 610 MAPEWAS-NLPITAKVDVYSYGVVILEMVKG 639
APE S L +VD++S GV++ ++ G
Sbjct: 177 AAPEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 93/222 (41%), Gaps = 53/222 (23%)
Query: 461 KSTKSFKEE------LGRGGSGAVYKG-VLADGRAVAVKRLGDLHQGEEVFWA------- 506
K ++F+ E LG+GG G V+ G L D VA+K + + + W+
Sbjct: 24 KDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIP---RNRVLGWSPLSDSVT 80
Query: 507 ---EVSTIGKIY----HMNLVRM--WGFCSEGRHRLL--------IYEYVEKQSLDKHLF 549
EV+ + K+ H ++R+ W EG +L +++Y+ ++
Sbjct: 81 CPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGP 140
Query: 550 SSYFLGWKERFKVALGTAKGLAYLHHD-EFEPKIADF--GLAKLSQRGS----NSSQFSQ 602
S F G + A+ +H D + E + D G AKL GS + ++
Sbjct: 141 SRCFFG---QVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTD 197
Query: 603 IRGTKGYMAPEWASN-----LPITAKVDVYSYGVVILEMVKG 639
GT+ Y PEW S LP T V+S G+++ +MV G
Sbjct: 198 FDGTRVYSPPEWISRHQYHALPAT----VWSLGILLYDMVCG 235
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 581 KIADFGLAK-LSQRGSNSSQFSQIRGTKGYMAPEWA-SNLPITAKVDVYSYGVVILEMVK 638
K+ DFG AK LS N + ++ Y APE N T VD++S G + EM+
Sbjct: 172 KLCDFGSAKKLSPSEPNVAYIC----SRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMML 227
Query: 639 GIRLSNWVVEDGEGQEAELKRFV----REVKRKI 668
G + + ++ GQ E+ R + REV RK+
Sbjct: 228 GEPI--FRGDNSAGQLHEIVRVLGCPSREVLRKL 259
>pdb|4EN3|A Chain A, Crystal Structure Of A Human Valpha24(-) Nkt Tcr In
Complex With Cd1dALPHA-Galactosylceramide
Length = 220
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Query: 113 RKSTKLISGVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPD---PDFDVFQNGRT 169
+KS+ L+ + YF +D + L +Y G WPD PD V+Q +
Sbjct: 72 KKSSSLLITASRAADTASYFCATYDRGSTLGRLYFGRGTQLTVWPDIQNPDPAVYQLRDS 131
Query: 170 KYNSSRIAVLDDFGSFSSSDELKFSAI 196
K + + + DF S ++ + K S +
Sbjct: 132 KSSDKSVCLFTDFDSQTNVSQSKDSDV 158
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 50/135 (37%), Gaps = 29/135 (21%)
Query: 534 LIYEYVEKQSLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFEP-------- 580
L++E + S+ H+ E V A L +LH H + +P
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHP 147
Query: 581 ------KIADFGLAKLSQRGSNSSQFSQIR-----GTKGYMAPEWASNLPITAKV----- 624
KI DFGL + + S S G+ YMAPE A +
Sbjct: 148 NQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRC 207
Query: 625 DVYSYGVVILEMVKG 639
D++S GV++ ++ G
Sbjct: 208 DLWSLGVILYILLSG 222
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ADFG AK + + + GT Y+APE + VD ++ GV+I EM G
Sbjct: 182 KVADFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ADFG AK + + + GT Y+APE + VD ++ GV+I EM G
Sbjct: 181 KVADFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ADFG AK + + + GT Y+APE + VD ++ GV+I EM G
Sbjct: 181 KVADFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ADFG AK + + + GT Y+APE + VD ++ GV+I EM G
Sbjct: 181 KVADFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 97/237 (40%), Gaps = 49/237 (20%)
Query: 434 QDVPSSLE-EGYQALSSQFRRFSYAELKKSTKSFKEELGRGGSGAVYKGVLADGRAVAVK 492
++ P ++E EG A ++ + K ST S LG G G V+ V + V
Sbjct: 4 EEPPKAVELEGLAACEGEYSQ------KYSTMS---PLGSGAFGFVWTAVDKEKNKEVVV 54
Query: 493 RLGDLHQGEEVFWAEVSTIGKIY----------HMNLVRMWG-FCSEGRHRLL------- 534
+ + E W E +GK+ H N++++ F ++G +L+
Sbjct: 55 KFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSG 114
Query: 535 --IYEYVEKQS-LDKHLFSSYFLGWKERFKVALGTAKGLAYLHHD----------EFEPK 581
++ ++++ LD+ L S F + A+G + +H D +F K
Sbjct: 115 LDLFAFIDRHPRLDEPLASYIF----RQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIK 170
Query: 582 IADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITA-KVDVYSYGVVILEMV 637
+ DFG A +RG F GT Y APE P +++++S GV + +V
Sbjct: 171 LIDFGSAAYLERG---KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ DFGLAK + + + GT Y+APE + VD ++ GV+I EM G
Sbjct: 181 KVTDFGLAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3A0C|A Chain A, Crystal Structure Of An Anti-Hiv Mannose-Binding Lectin
From Polygonatum Cyrtonema Hua
pdb|3A0C|B Chain B, Crystal Structure Of An Anti-Hiv Mannose-Binding Lectin
From Polygonatum Cyrtonema Hua
pdb|3A0C|C Chain C, Crystal Structure Of An Anti-Hiv Mannose-Binding Lectin
From Polygonatum Cyrtonema Hua
pdb|3A0C|D Chain D, Crystal Structure Of An Anti-Hiv Mannose-Binding Lectin
From Polygonatum Cyrtonema Hua
pdb|3A0D|A Chain A, Crystal Structure Of Polygonatum Cyrtonema Lectin (Pcl)
Complexed With Monomannoside
pdb|3A0E|A Chain A, Crystal Structure Of Polygonatum Cyrtonema Lectin (Pcl)
Complexed With Dimannoside
Length = 110
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 30 VWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTSTGADRAELLDTG-NLVLK 88
VW +N G G R +L NG +V+ D + VIW T T +L N+V+
Sbjct: 41 VWASNTGGL--GSGCRLTLHNNGNLVIYDQSNRVIWQTKTNGKEDHYVLVLQQDRNVVI- 97
Query: 89 DRHGKILWQSFDYP 102
+G ++W + P
Sbjct: 98 --YGPVVWATGSGP 109
>pdb|2HCU|A Chain A, Crystal Structure Of Smu.1381 (Or Leud) From Streptococcus
Mutans
Length = 213
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 24/101 (23%)
Query: 103 TDTLLPNQVFRKSTKLISGVGNGTYASGYFSLYFDNDNVLRLIYDGPEISSVYWPDPDFD 162
TD +LP Q KLI G G Y L+Y+ + + Y +PDF
Sbjct: 38 TDQILPKQFL----KLIDKKGFGKY----------------LMYEWRYLDNNYTENPDF- 76
Query: 163 VFQNGRTKYNSSRIAVL-DDFGSFSSSDELKFSAIDMGFGI 202
+F + +Y + I + D+FG+ SS + ++ D GF +
Sbjct: 77 IFN--QPEYREASILITGDNFGAGSSREHAAWALADYGFKV 115
>pdb|2DPF|A Chain A, Crystal Structure Of Curculin1 Homodimer
pdb|2DPF|B Chain B, Crystal Structure Of Curculin1 Homodimer
pdb|2DPF|C Chain C, Crystal Structure Of Curculin1 Homodimer
pdb|2DPF|D Chain D, Crystal Structure Of Curculin1 Homodimer
Length = 115
Score = 30.8 bits (68), Expect = 3.1, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 30 VWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTSTGADRAELLDT-GNLVLK 88
+W +N DR G G R +L +G +V+ D ++ +W + A +L G V+
Sbjct: 41 IWASNTDR--RGSGCRLTLLSDGNLVIYDHNNNDVWGSACWGDNGKYALVLQKDGRFVI- 97
Query: 89 DRHGKILW 96
+G +LW
Sbjct: 98 --YGPVLW 103
Score = 29.3 bits (64), Expect = 8.5, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 64 IWMTNTTSTGAD-RAELLDTGNLVLKDRHGKILWQS 98
IW +NT G+ R LL GNLV+ D + +W S
Sbjct: 41 IWASNTDRRGSGCRLTLLSDGNLVIYDHNNNDVWGS 76
>pdb|2D04|B Chain B, Crystal Structure Of Neoculin, A Sweet Protein With
Taste-Modifying Activity.
pdb|2D04|D Chain D, Crystal Structure Of Neoculin, A Sweet Protein With
Taste-Modifying Activity.
pdb|2D04|F Chain F, Crystal Structure Of Neoculin, A Sweet Protein With
Taste-Modifying Activity.
pdb|2D04|H Chain H, Crystal Structure Of Neoculin, A Sweet Protein With
Taste-Modifying Activity
Length = 114
Score = 30.8 bits (68), Expect = 3.1, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 30 VWTANRDRPVNGQGSRASLRRNGAMVLTDVDDTVIWMTNTTSTGADRAELLDT-GNLVLK 88
+W +N DR G G R +L +G +V+ D ++ +W + A +L G V+
Sbjct: 40 IWASNTDR--RGSGCRLTLLSDGNLVIYDHNNNDVWGSACWGDNGKYALVLQKDGRFVI- 96
Query: 89 DRHGKILW 96
+G +LW
Sbjct: 97 --YGPVLW 102
Score = 29.3 bits (64), Expect = 8.7, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 64 IWMTNTTSTGAD-RAELLDTGNLVLKDRHGKILWQS 98
IW +NT G+ R LL GNLV+ D + +W S
Sbjct: 40 IWASNTDRRGSGCRLTLLSDGNLVIYDHNNNDVWGS 75
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 64/174 (36%), Gaps = 23/174 (13%)
Query: 486 GRAVAVKRLGDLHQGE---EVFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQ 542
G+ VAVK + + + EV + H N+V+++ + L+ EY
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGG 98
Query: 543 SLDKHLFSSYFLGWKERFKVALGTAKGLAYLH-----HDEFEP-----------KIADFG 586
+ +L + KE + Y H H + + KIADFG
Sbjct: 99 EVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFG 158
Query: 587 LAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITA-KVDVYSYGVVILEMVKG 639
+ G+ F G Y APE +VDV+S GV++ +V G
Sbjct: 159 FSNEFTFGNKLDAFC---GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
KI DFG + Q G Q Q ++ Y +PE +P +D++S G +++EM G
Sbjct: 201 KIVDFGSS--CQLGQRIYQXIQ---SRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 7/60 (11%)
Query: 581 KIADFGLA-KLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
KI DFG + +L QR Q ++ Y +PE +P +D++S G +++EM G
Sbjct: 201 KIVDFGSSCQLGQRIYQXIQ------SRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 7/60 (11%)
Query: 581 KIADFGLA-KLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
KI DFG + +L QR Q ++ Y +PE +P +D++S G +++EM G
Sbjct: 182 KIVDFGSSCQLGQR------IYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 235
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 88/211 (41%), Gaps = 42/211 (19%)
Query: 465 SFKEELGRGGSGAVYKGVLADGRAVAVKRLGDLHQGE----EVFWAEVSTIGKIYHMN-- 518
S +++G GGS V++ VL + + + + +L + + + + E++ + K+ +
Sbjct: 59 SILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 519 LVRMWGFCSEGRHRLLIYE---------YVEKQSLDKHLFSSYFLGWKERFKVALGTAKG 569
++R++ + ++ ++ E +K+S+D SY WK + A+ T
Sbjct: 118 IIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSY---WKNMLE-AVHTIHQ 173
Query: 570 LAYLHHDEFEP----------KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLP 619
+H D +P K+ DFG+A Q + S G YM PE ++
Sbjct: 174 HGIVHSD-LKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMS 232
Query: 620 ITAK-----------VDVYSYGVVILEMVKG 639
+ + DV+S G ++ M G
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYG 263
>pdb|1A7J|A Chain A, Phosphoribulokinase From Rhodobacter Spheroides
Length = 290
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 431 FRRQDVPSSLEEGYQALSSQFRRFSYA--ELKKSTKSFKEELGRGGSGAVYKGVLADGRA 488
F R D+ + L+ Y A + F FSY ELK+ + F+ E G G G V D A
Sbjct: 47 FNRADMKAELDRRYAAGDATFSHFSYEANELKELERVFR-EYGETGQGRTRTYVHDDAEA 105
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ FG+A Q G + GT +MAPE P VDV+ GV++ ++ G
Sbjct: 173 KLGGFGVA--IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ FG+A Q G + GT +MAPE P VDV+ GV++ ++ G
Sbjct: 175 KLGGFGVA--IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 457 AELK-KSTKSFKE--ELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG---EEVFWAEV- 508
AE+K + T F E ++G G G+V+K V DG A+KR G E+ EV
Sbjct: 1 AEMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVY 60
Query: 509 --STIGKIYHMNLVRMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY----FLGWKERFKV 562
+ +G+ H ++VR + +E H L+ EY SL + +Y + E +
Sbjct: 61 AHAVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDL 118
Query: 563 ALGTAKGLAYLH 574
L +GL Y+H
Sbjct: 119 LLQVGRGLRYIH 130
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.0 bits (66), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
++ DFGLAK + + + GT Y+APE + VD ++ GV+I EM G
Sbjct: 181 QVTDFGLAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2IK8|B Chain B, Crystal Structure Of The Heterodimeric Complex Of Human
Rgs16 And Activated Gi Alpha 1
pdb|2IK8|D Chain D, Crystal Structure Of The Heterodimeric Complex Of Human
Rgs16 And Activated Gi Alpha 1
Length = 140
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 549 FSSYFLGWKERFKVALGTAKGLAYLH---HDEFEPKIADFGLA 588
FS LGW+E F + L + G+A H EF + +F LA
Sbjct: 5 FSEDVLGWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLA 47
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 578 FEPKIADFGLAKLSQRGSNSSQFSQIR--GTKGYMAPEW--ASNLPITAKVDVYSYGVVI 633
FE K+ DFGL+K + +N + GT ++APE +N K D +S GV++
Sbjct: 207 FEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266
Query: 634 LEMVKG 639
++ G
Sbjct: 267 HLLLMG 272
>pdb|2BT2|A Chain A, Structure Of The Regulator Of G-Protein Signaling 16
pdb|2BT2|B Chain B, Structure Of The Regulator Of G-Protein Signaling 16
pdb|2BT2|C Chain C, Structure Of The Regulator Of G-Protein Signaling 16
pdb|2BT2|D Chain D, Structure Of The Regulator Of G-Protein Signaling 16
pdb|2BT2|E Chain E, Structure Of The Regulator Of G-Protein Signaling 16
Length = 161
Score = 29.6 bits (65), Expect = 6.0, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 549 FSSYFLGWKERFKVALGTAKGLAYLH---HDEFEPKIADFGLA 588
FS LGW+E F + L + G+A H EF + +F LA
Sbjct: 26 FSEDVLGWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLA 68
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ DFG AK + + + GT Y+APE + VD ++ GV+I EM G
Sbjct: 181 KVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ DFG AK + + + GT Y+APE + VD ++ GV+I EM G
Sbjct: 182 KVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ DFG AK + + + GT Y+APE + VD ++ GV+I EM G
Sbjct: 182 KVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ DFG AK + + + GT Y+APE + VD ++ GV+I EM G
Sbjct: 181 KVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ DFG AK + + + GT Y+APE + VD ++ GV+I EM G
Sbjct: 182 KVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
K+ DFG AK + + + GT Y+APE + VD ++ GV+I EM G
Sbjct: 182 KVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1KJ1|D Chain D, Mannose-Specific Agglutinin (Lectin) From Garlic (Allium
Sativum) Bulbs Complexed With Alpha-D-Mannose
pdb|1KJ1|Q Chain Q, Mannose-Specific Agglutinin (Lectin) From Garlic (Allium
Sativum) Bulbs Complexed With Alpha-D-Mannose
Length = 109
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 48 LRRNGAMVLTDVDDTVIWMTNTTSTGAD--RAELLDTGNLVLKDRHGKILWQS 98
++ + +VL D T +W TNT G +A L GN V+ D G+ LW S
Sbjct: 25 MQEDCNLVLYD-HSTAVWTTNTDIPGKKGCKAVLQSDGNFVVYDAEGRSLWAS 76
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 13/118 (11%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG---EEVFWAEV---STIGKIYHMNLV 520
E++G G G+V+K V DG A+KR G E+ EV + +G+ H ++V
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ--HSHVV 72
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY----FLGWKERFKVALGTAKGLAYLH 574
R + +E H L+ EY SL + +Y + E + L +GL Y+H
Sbjct: 73 RYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH 130
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 29.6 bits (65), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
++ DFG AK + + + + GT Y+APE + VD ++ GV+I EM G
Sbjct: 202 QVTDFGFAKRVKGATWT-----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3C7K|B Chain B, Molecular Architecture Of Galphao And The Structural Basis
For Rgs16-Mediated Deactivation
pdb|3C7K|D Chain D, Molecular Architecture Of Galphao And The Structural Basis
For Rgs16-Mediated Deactivation
Length = 129
Score = 29.6 bits (65), Expect = 6.7, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 549 FSSYFLGWKERFKVALGTAKGLAYLH---HDEFEPKIADFGLA 588
FS LGW+E F + L + G+A H EF + +F LA
Sbjct: 3 FSEDVLGWRESFDLLLNSKNGVAAFHAFLKTEFSEENLEFWLA 45
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 29.6 bits (65), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 13/118 (11%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG---EEVFWAEV---STIGKIYHMNLV 520
E++G G G+V+K V DG A+KR G E+ EV + +G+ H ++V
Sbjct: 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ--HSHVV 74
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY----FLGWKERFKVALGTAKGLAYLH 574
R + +E H L+ EY SL + +Y + E + L +GL Y+H
Sbjct: 75 RYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH 132
>pdb|3C7L|A Chain A, Molecular Architecture Of Galphao And The Structural Basis
For Rgs16-Mediated Deactivation
pdb|3C7L|B Chain B, Molecular Architecture Of Galphao And The Structural Basis
For Rgs16-Mediated Deactivation
Length = 137
Score = 29.6 bits (65), Expect = 7.0, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 549 FSSYFLGWKERFKVALGTAKGLAYLH---HDEFEPKIADFGLA 588
FS LGW+E F + L + G+A H EF + +F LA
Sbjct: 11 FSEDVLGWRESFDLLLNSKNGVAAFHAFLKTEFSEENLEFWLA 53
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 29.6 bits (65), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
++ DFG AK + + + GT Y+APE + VD ++ GV+I EM G
Sbjct: 181 QVTDFGFAKRVK-----GRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 13/118 (11%)
Query: 468 EELGRGGSGAVYKGV-LADGRAVAVKRLGDLHQG---EEVFWAEV---STIGKIYHMNLV 520
E++G G G+V+K V DG A+KR G E+ EV + +G+ H ++V
Sbjct: 13 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ--HSHVV 70
Query: 521 RMWGFCSEGRHRLLIYEYVEKQSLDKHLFSSY----FLGWKERFKVALGTAKGLAYLH 574
R + +E H L+ EY SL + +Y + E + L +GL Y+H
Sbjct: 71 RYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH 128
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 582 IADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
+ DFG+A + +Q GT Y APE S T + D+Y+ V+ E + G
Sbjct: 175 LVDFGIASATT-DEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTG 231
>pdb|3R0E|A Chain A, Structure Of Remusatia Vivipara Lectin
pdb|3R0E|C Chain C, Structure Of Remusatia Vivipara Lectin
Length = 109
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 65 WMTNTTSTGAD-RAELLDTGNLVLKDRHGKILWQS 98
W +NT + G D + L D G LV+K+ G +W+S
Sbjct: 40 WQSNTANNGRDCKLTLTDYGELVIKNGDGSTVWKS 74
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 581 KIADFGLAKLSQRGSNSSQFSQIRGTKGYMAPEWASNLPITAKVDVYSYGVVILEMVKG 639
++ DFG AK + + + GT Y+APE + VD ++ GV+I EM G
Sbjct: 181 QVTDFGFAKRVK-----GRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,227,183
Number of Sequences: 62578
Number of extensions: 1102645
Number of successful extensions: 4057
Number of sequences better than 100.0: 928
Number of HSP's better than 100.0 without gapping: 298
Number of HSP's successfully gapped in prelim test: 630
Number of HSP's that attempted gapping in prelim test: 2954
Number of HSP's gapped (non-prelim): 1039
length of query: 736
length of database: 14,973,337
effective HSP length: 106
effective length of query: 630
effective length of database: 8,340,069
effective search space: 5254243470
effective search space used: 5254243470
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)